Rmu_sc0004795.1_g000010

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004795.1
Physical Location & Seq
Reverse (-)
39167 .. 42005
2839 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004795.1_g000010.1.cds

Sequence Viewer

Length: 2676 bp
atggagtttgccagcagcattgcagatgatgtcttgggtaggctagcttcacatgtttcccaacagatctccttggcatggggtgcccaacttaagctcagcaagctcaacaacaccttatctgccatcaaactggtgctcgaggatgcagagaagaagcaagtgagaaatcccctaatcactcgttggttaggaaatctcaaagatgtttgtcatgatgttgatgatgtcttggacgaactggacttccaaaagttgcggttgaaagtggaggccgacaactgtgggaagatcaaaggaaaggtacgccactttttttcccgatggaatccagtagtgtttaacttcaaaatgggacataaagtgaaagagattggaaagagactagttgaaattacaaatgaacagagacagtttactctccttgagtttgctaagatagttgaggatcttcgtgcgccccaacaagtgcacgatgacaggaggatgactacctctaaagttgaggcttcaaatgttattggaagagatgatgataaaaaccagattatcaagcatctcttgaatgacactgatttctccagtgaggagaatgtttctgttgtttccataattgggttaggagggttggggaaaacaacacttgctaaattggtgtacaatgatagcatggtagaagaaaattttgagacaaagatgtggatatgtgtctcatacaactttgatattcaaacattaattcgaggtattactaatgctgcaaatggaccaaaatgtgaggatgaaagtttggatctcatggaaagaaagttgcaagatactcttagaggtaaaaaaattttattggtgttggacgatatctgggatacagagtcgattggagtaacaattgaaaaatggattgatttaaaaactttgttaaatgtgggagctaatggaagcaaaatcattataacaacacgaaataaatcagttgctttacttgtgagtcccttatacatgcattctttagaaggtctttcgcacaaagattgcatgtccttgttcatccaaagggcatttaaaagaggagaggagcagcactatcagcatttgatagaaattggagaggatattgtgaagaagtgtggtggagttcctttagcagtaactactgtagggagcatgctctatttgaatagagagcaacaccattggctgcgtgtcagagaggatgacatgtggagtataggggatgaaaatattctacctgcattgaaattgagttatgatgcattgccaccacacttgaaaccatgttttgcattttgttcacttttcccaaaggattttcaattcgacagtggcttcttgcttccactatggatagcacaaggatacctcaaaatgtgtaagaaagaagattttgaacatatgggtatagagtatataaggcagttttgctctagatctttgtttcaagtcgagtttgatatcaaaacaggcatagcttttaaaatacatgatctagttcatgatttagcaatttcagtggcacaagtagagtattccacagtcaatttccgtccctctagtgctttggaaatggttcggtatgtgtcaatatctaaaaaagacttgcttggagatgaggcacaaattcctgatttcatgctcaagtcaaagaaattacgaaccattctaatccttgaagatggtcagatgagtcaacgttttttgaaggcatgcatcttgagatttaaatatatgcgggtgctagatctgggggggtcgcctcttgaggagctaccaagttccattggtagtttgtttcatttgagattcctcaacttgtgcggtaatagtgagataaaaaggcttcccaattccttcagtaagttgctgaatttggagaccttgcaccttcgcaagtgcgacgcacttgaggagatacccaaagacataggaaacctgatcaacctccgaagcttgtcgataacaacacagcagacgcatttgccaaaaggaattagacacctcaccttacttcaatttttatgttttattagatgtgtcaatcttaaatctttgggcgaagagatcaaattcctgaaaaaccttcgcaaactggggatttttacttgtaataatttggaatacttgccaccaaatatgaaaaacatgaccgctttagatactttgttcatccatgattgcgtcaggcttcaggtgatgatgagatcaggggaaggcccacaacgtcttcgatcattggttatcgagaaatcaagtttggtgactttgcctccttggcttgaagattctgcagacactctacagagcatatatctttatggatgtcataatctcacggcagttccggagttgataaactttagattcctcgagcaactgcacattcaagaatgctccaaattgtcggctttgccgcaagggttgcattgccttactcatttgagagaattgaagattggagggtgtcctgaactgagcaaaagttgcaaaaggcaattaaaaggtcaggagtggtcaaagatggcacgtcaggtgaagattacactcgacgctgatgatgaagaagatgaaaccaacaatcgcttggccgacggtaggatcgtataccgcacaacgcgattcagcttggattgggcgagtattttggggtacagcagctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

891

Amino Acids

101.77

Weight (kDa)

7.52

Isoelectric Point (pI)

40.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 953
Acc36I ACCTGC 1 cut(s) 1258
AccB1I GGYRCC 1 cut(s) 83
AccI GTMKAC 1 cut(s) 2619
AccII CGCG 1 cut(s) 2632
AccIII TCCGGA 1 cut(s) 2359
AciI CCGC 6 cut(s) 259, 1750, 1836, 2166, 2429, 2623
AclI AACGTT 1 cut(s) 1711
AclWI GGATC 3 cut(s) 456, 801, 2621
AcoI YGGCCR 1 cut(s) 2601
AcsI RAATTY 5 cut(s) 682, 837, 1638, 1885, 2084
AcuI CTGAAG 2 cut(s) 1855, 2189
AfaI GTAC 3 cut(s) 306, 659, 2666
AfiI CCNNNNNNNGG 3 cut(s) 78, 615, 2610
AflII CTTAAG 1 cut(s) 92
AflIII ACRYGT 2 cut(s) 52, 1218
AhlI ACTAGT 1 cut(s) 385
AjiI CACGTC 1 cut(s) 2543
AjuI GAANNNNNNNTTGG 4 cut(s) 2255, 2287, 2454, 2486
AloI GAACNNNNNNTCC 2 cut(s) 231, 263
AluBI AGCT 9 cut(s) 47, 97, 106, 932, 1490, 1786, 1968, 2640, 2673
AluI AGCT 9 cut(s) 47, 97, 106, 932, 1490, 1786, 1968, 2640, 2673
Alw21I GWGCWC 2 cut(s) 141, 474
Alw26I GTCTC 5 cut(s) 376, 403, 683, 715, 1886
Alw44I GTGCAC 1 cut(s) 470
AlwI GGATC 3 cut(s) 456, 801, 2621
AlwNI CAGNNNCTG 1 cut(s) 2673
Ama87I CYCGRG 2 cut(s) 140, 2384
Aor13HI TCCGGA 1 cut(s) 2359
AoxI GGCC 3 cut(s) 273, 2230, 2601
ApaLI GTGCAC 1 cut(s) 470
ApeKI GCWGC 5 cut(s) 15, 758, 1078, 1198, 2670
ApoI RAATTY 5 cut(s) 682, 837, 1638, 1885, 2084
AseI ATTAAT 1 cut(s) 737
Asp700I GAANNNNTTC 2 cut(s) 1242, 1587
AspLEI GCGC 1 cut(s) 460
AspS9I GGNCC 2 cut(s) 767, 2231
AsuHPI GGTGA 4 cut(s) 2011, 2221, 2287, 2560
AsuNHI GCTAGC 1 cut(s) 43
AvaI CYCGRG 2 cut(s) 140, 2384
AvaII GGWCC 1 cut(s) 767
BaeGI GKGCMC 2 cut(s) 88, 474
BanI GGYRCC 1 cut(s) 83
BarI GAAGNNNNNNTAC 2 cut(s) 31, 63
BbsI GAAGAC 1 cut(s) 2234
Bbv12I GWGCWC 2 cut(s) 141, 474
BbvI GCAGC 4 cut(s) 27, 745, 1090, 1185
BccI CCATC 4 cut(s) 134, 318, 1688, 2530
BceAI ACGGC 1 cut(s) 2367
BciVI GTATCC 2 cut(s) 859, 1370
BclI TGATCA 1 cut(s) 1953
BcoDI GTCTC 5 cut(s) 376, 403, 683, 715, 1886
BcuI ACTAGT 1 cut(s) 385
BfaI CTAG 6 cut(s) 44, 386, 1446, 1508, 1572, 1757
BfmI CTRYAG 3 cut(s) 1155, 2304, 2315
BfrI CTTAAG 1 cut(s) 92
BfuAI ACCTGC 1 cut(s) 1258
BfuI GTATCC 2 cut(s) 859, 1370
BglI GCCNNNNNGGC 1 cut(s) 2290
BglII AGATCT 3 cut(s) 66, 1448, 1759
BisI GCNGC 6 cut(s) 16, 759, 1079, 1199, 2429, 2671
BlpI GCTNAGC 1 cut(s) 98
BlsI GCNGC 6 cut(s) 17, 760, 1080, 1200, 2430, 2672
Bme18I GGWCC 1 cut(s) 767
BmeT110I CYCGRG 2 cut(s) 140, 2384
BmgBI CACGTC 1 cut(s) 2543
BmgT120I GGNCC 2 cut(s) 767, 2231
BmiI GGNNCC 1 cut(s) 85
BmrI ACTGGG 1 cut(s) 2117
BmsI GCATC 4 cut(s) 136, 565, 1261, 1737
BmtI GCTAGC 1 cut(s) 47
BmuI ACTGGG 1 cut(s) 2117
BpiI GAAGAC 1 cut(s) 2234
BpmI CTGGAG 1 cut(s) 565
Bpu1102I GCTNAGC 1 cut(s) 98
BpuEI CTTGAG 5 cut(s) 446, 1640, 1753, 1799, 1943
BsaI GGTCTC 1 cut(s) 1886
BsaJI CCNNGG 2 cut(s) 72, 2288
BsaWI WCCGGW 1 cut(s) 2359
BsaXI ACNNNNNCTCC 2 cut(s) 2269, 2299
Bsc4I CCNNNNNNNGG 3 cut(s) 78, 615, 2610
Bse1I ACTGG 5 cut(s) 138, 246, 332, 582, 2112
Bse3DI GCAATG 3 cut(s) 18, 1274, 2440
BseAI TCCGGA 1 cut(s) 2359
BseDI CCNNGG 2 cut(s) 72, 2288
BseGI GGATG 8 cut(s) 151, 492, 787, 1047, 1219, 1240, 2184, 2342
BseLI CCNNNNNNNGG 3 cut(s) 78, 615, 2610
BseMI GCAATG 3 cut(s) 18, 1274, 2440
BseMII CTCAG 2 cut(s) 112, 2480
BseNI ACTGG 5 cut(s) 138, 246, 332, 582, 2112
BseRI GAGGAG 5 cut(s) 602, 1083, 1088, 1796, 1940
BseSI GKGCMC 2 cut(s) 88, 474
BseXI GCAGC 4 cut(s) 27, 745, 1090, 1185
BsgI GTGCAG 1 cut(s) 2378
Bsh1236I CGCG 1 cut(s) 2632
BshFI GGCC 3 cut(s) 275, 2232, 2603
BshNI GGYRCC 1 cut(s) 83
BsiHKAI GWGCWC 2 cut(s) 141, 474
BsiHKCI CYCGRG 2 cut(s) 140, 2384
BsiSI CCGG 1 cut(s) 2360
BslFI GGGAC 3 cut(s) 369, 975, 1551
BslI CCNNNNNNNGG 3 cut(s) 78, 615, 2610
BsmAI GTCTC 5 cut(s) 376, 403, 683, 715, 1886
BsmFI GGGAC 3 cut(s) 369, 975, 1551
BsmI GAATGC 2 cut(s) 1003, 2411
BsnI GGCC 3 cut(s) 275, 2232, 2603
Bso31I GGTCTC 1 cut(s) 1886
BsoBI CYCGRG 2 cut(s) 140, 2384
Bsp1286I GDGCHC 3 cut(s) 88, 141, 474
Bsp13I TCCGGA 1 cut(s) 2359
Bsp1407I TGTACA 1 cut(s) 657
Bsp1720I GCTNAGC 1 cut(s) 98
BspACI CCGC 6 cut(s) 259, 1750, 1836, 2166, 2429, 2623
BspANI GGCC 3 cut(s) 275, 2232, 2603
BspCNI CTCAG 2 cut(s) 111, 2481
BspEI TCCGGA 1 cut(s) 2359
BspFNI CGCG 1 cut(s) 2632
BspHI TCATGA 2 cut(s) 214, 1513
BspLI GGNNCC 1 cut(s) 85
BspMAI CTGCAG 1 cut(s) 2308
BspMI ACCTGC 1 cut(s) 1258
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 3 cut(s) 456, 801, 2621
BspT107I GGYRCC 1 cut(s) 83
BspTI CTTAAG 1 cut(s) 92
BspTNI GGTCTC 1 cut(s) 1886
BsrDI GCAATG 3 cut(s) 18, 1274, 2440
BsrGI TGTACA 1 cut(s) 657
BsrI ACTGG 5 cut(s) 138, 246, 332, 582, 2112
BssECI CCNNGG 2 cut(s) 72, 2288
BssNAI GTATAC 1 cut(s) 2620
BssT1I CCWWGG 2 cut(s) 72, 2288
Bst1107I GTATAC 1 cut(s) 2620
Bst4CI ACNGT 6 cut(s) 284, 414, 1156, 1343, 1555, 2609
Bst6I CTCTTC 2 cut(s) 520, 2070
BstAFI CTTAAG 1 cut(s) 92
BstAPI GCANNNNNTGC 3 cut(s) 83, 2437, 2499
BstAUI TGTACA 1 cut(s) 657
BstC8I GCNNGC 5 cut(s) 13, 45, 104, 1166, 1726
BstDEI CTNAG 4 cut(s) 98, 435, 824, 2489
BstF5I GGATG 8 cut(s) 151, 492, 787, 1047, 1219, 1240, 2184, 2342
BstFNI CGCG 1 cut(s) 2632
BstHHI GCGC 1 cut(s) 460
BstMAI GTCTC 5 cut(s) 376, 403, 683, 715, 1886
BstMWI GCNNNNNNNGC 6 cut(s) 83, 103, 1087, 2290, 2437, 2499
BstNSI RCATGY 6 cut(s) 56, 1003, 1039, 1168, 1222, 1728
BstSFI CTRYAG 3 cut(s) 1155, 2304, 2315
BstSLI GKGCMC 2 cut(s) 88, 474
BstUI CGCG 1 cut(s) 2632
BstV1I GCAGC 4 cut(s) 27, 745, 1090, 1185
BstV2I GAAGAC 1 cut(s) 2234
BstX2I RGATCY 5 cut(s) 66, 448, 793, 1448, 1759
BstXI CCANNNNNNTGG 1 cut(s) 133
BstYI RGATCY 5 cut(s) 66, 448, 793, 1448, 1759
BstZ17I GTATAC 1 cut(s) 2620
BsuI GTATCC 2 cut(s) 859, 1370
BsuRI GGCC 3 cut(s) 275, 2232, 2603
BtrI CACGTC 1 cut(s) 2543
BtsCI GGATG 8 cut(s) 151, 492, 787, 1047, 1219, 1240, 2184, 2342
BtsIMutI CAGTG 4 cut(s) 570, 589, 1348, 1536
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 5 cut(s) 13, 45, 104, 1166, 1726
CaiI CAGNNNCTG 1 cut(s) 2673
CciI TCATGA 2 cut(s) 214, 1513
CfoI GCGC 1 cut(s) 460
Cfr13I GGNCC 2 cut(s) 767, 2231
CseI GACGC 4 cut(s) 1925, 1999, 2185, 2573
Csp6I GTAC 3 cut(s) 305, 658, 2665
CspCI CAANNNNNGTGG 4 cut(s) 1269, 1304, 1512, 1547
CviQI GTAC 3 cut(s) 305, 658, 2665
DdeI CTNAG 4 cut(s) 98, 435, 824, 2489
DraI TTTAAA 4 cut(s) 909, 1063, 1495, 1741
EaeI YGGCCR 1 cut(s) 2601
Eam1104I CTCTTC 2 cut(s) 520, 2070
EarI CTCTTC 2 cut(s) 520, 2070
Eco130I CCWWGG 2 cut(s) 72, 2288
Eco31I GGTCTC 1 cut(s) 1886
Eco32I GATATC 2 cut(s) 859, 1474
Eco47I GGWCC 1 cut(s) 767
Eco57I CTGAAG 2 cut(s) 1855, 2189
Eco88I CYCGRG 2 cut(s) 140, 2384
EcoRV GATATC 2 cut(s) 859, 1474
EcoT14I CCWWGG 2 cut(s) 72, 2288
EcoT22I ATGCAT 3 cut(s) 1005, 1276, 1730
ErhI CCWWGG 2 cut(s) 72, 2288
FalI AAGNNNNNCTT 6 cut(s) 545, 577, 807, 839, 1605, 1637
FaqI GGGAC 3 cut(s) 369, 975, 1551
FauI CCCGC 1 cut(s) 1743
FauNDI CATATG 1 cut(s) 1413
FbaI TGATCA 1 cut(s) 1953
FblI GTMKAC 1 cut(s) 2619
Fnu4HI GCNGC 6 cut(s) 16, 759, 1079, 1199, 2429, 2671
FokI GGATG 8 cut(s) 158, 499, 794, 1034, 1226, 1247, 2171, 2349
Fsp4HI GCNGC 6 cut(s) 16, 759, 1079, 1199, 2429, 2671
FspBI CTAG 6 cut(s) 44, 386, 1446, 1508, 1572, 1757
GlaI GCGC 1 cut(s) 459
GluI GCNGC 6 cut(s) 16, 759, 1079, 1199, 2429, 2671
GsuI CTGGAG 1 cut(s) 565
HaeIII GGCC 3 cut(s) 275, 2232, 2603
HapII CCGG 1 cut(s) 2360
HgaI GACGC 4 cut(s) 1925, 1999, 2185, 2573
HhaI GCGC 1 cut(s) 460
Hin6I GCGC 1 cut(s) 458
HinP1I GCGC 1 cut(s) 458
HincII GTYRAC 1 cut(s) 1709
HindII GTYRAC 1 cut(s) 1709
HindIII AAGCTT 1 cut(s) 1966
HinfI GANTC 8 cut(s) 328, 872, 988, 1705, 1821, 2300, 2379, 2634
HpaII CCGG 1 cut(s) 2360
HphI GGTGA 4 cut(s) 2011, 2221, 2287, 2560
Hpy166II GTNNAC 6 cut(s) 417, 472, 658, 1313, 1709, 2620
Hpy188I TCNGA 3 cut(s) 1208, 1701, 1964
Hpy8I GTNNAC 6 cut(s) 417, 472, 658, 1313, 1709, 2620
Hpy99I CGWCG 3 cut(s) 1919, 2567, 2609
HpyAV CCTTC 6 cut(s) 1007, 1714, 1879, 1913, 2108, 2222
HpyCH4III ACNGT 6 cut(s) 284, 414, 1156, 1343, 1555, 2609
HpyCH4IV ACGT 3 cut(s) 1711, 2239, 2542
HpyF10VI GCNNNNNNNGC 6 cut(s) 83, 103, 1087, 2290, 2437, 2499
HpyF3I CTNAG 4 cut(s) 98, 435, 824, 2489
HpySE526I ACGT 3 cut(s) 1711, 2239, 2542
HspAI GCGC 1 cut(s) 458
Kpn2I TCCGGA 1 cut(s) 2359
Ksp22I TGATCA 1 cut(s) 1953
LmnI GCTCC 5 cut(s) 929, 1075, 1161, 1783, 2414
Lsp1109I GCAGC 4 cut(s) 27, 745, 1090, 1185
LweI GCATC 4 cut(s) 136, 565, 1261, 1737
MaeI CTAG 6 cut(s) 44, 386, 1446, 1508, 1572, 1757
MaeII ACGT 3 cut(s) 1711, 2239, 2542
MaeIII GTNAC 3 cut(s) 883, 1147, 2275
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 5 cut(s) 66, 448, 793, 1448, 1759
MhlI GDGCHC 3 cut(s) 88, 141, 474
MlyI GAGTC 3 cut(s) 881, 997, 1714
MmeI TCCRAC 1 cut(s) 831
Mph1103I ATGCAT 3 cut(s) 1005, 1276, 1730
MroI TCCGGA 1 cut(s) 2359
MroXI GAANNNNTTC 2 cut(s) 1242, 1587
MspA1I CMGCKG 1 cut(s) 2673
MspCI CTTAAG 1 cut(s) 92
MspI CCGG 1 cut(s) 2360
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 2 cut(s) 1003, 2411
MvnI CGCG 1 cut(s) 2632
MwoI GCNNNNNNNGC 6 cut(s) 83, 103, 1087, 2290, 2437, 2499
NdeI CATATG 1 cut(s) 1413
NheI GCTAGC 1 cut(s) 43
NlaIV GGNNCC 1 cut(s) 85
NmuCI GTSAC 1 cut(s) 2275
NsiI ATGCAT 3 cut(s) 1005, 1276, 1730
NspI RCATGY 6 cut(s) 56, 1003, 1039, 1168, 1222, 1728
PaeI GCATGC 2 cut(s) 1168, 1728
PaeR7I CTCGAG 2 cut(s) 140, 2384
PagI TCATGA 2 cut(s) 214, 1513
PciI ACATGT 2 cut(s) 52, 1218
PcsI WCGNNNNNNNCGW 1 cut(s) 2613
PctI GAATGC 2 cut(s) 1003, 2411
PdmI GAANNNNTTC 2 cut(s) 1242, 1587
PfeI GAWTC 5 cut(s) 328, 1821, 2300, 2379, 2634
PkrI GCNGC 6 cut(s) 17, 760, 1080, 1200, 2430, 2672
PleI GAGTC 3 cut(s) 880, 996, 1713
PpsI GAGTC 3 cut(s) 880, 996, 1713
PscI ACATGT 2 cut(s) 52, 1218
PshBI ATTAAT 1 cut(s) 737
PsiI TTATAA 1 cut(s) 953
Psp1406I AACGTT 1 cut(s) 1711
PspN4I GGNNCC 1 cut(s) 85
PspPI GGNCC 2 cut(s) 767, 2231
PspXI VCTCGAGB 2 cut(s) 140, 2384
PstI CTGCAG 1 cut(s) 2308
PstNI CAGNNNCTG 1 cut(s) 2673
PsuI RGATCY 5 cut(s) 66, 448, 793, 1448, 1759
PvuII CAGCTG 1 cut(s) 2673
RsaI GTAC 3 cut(s) 306, 659, 2666
RsaNI GTAC 3 cut(s) 305, 658, 2665
SatI GCNGC 6 cut(s) 16, 759, 1079, 1199, 2429, 2671
Sau96I GGNCC 2 cut(s) 767, 2231
SchI GAGTC 3 cut(s) 881, 997, 1714
SduI GDGCHC 3 cut(s) 88, 141, 474
SfaNI GCATC 4 cut(s) 136, 565, 1261, 1737
SfcI CTRYAG 3 cut(s) 1155, 2304, 2315
Sfr274I CTCGAG 2 cut(s) 140, 2384
SinI GGWCC 1 cut(s) 767
SlaI CTCGAG 2 cut(s) 140, 2384
SmiI ATTTAAAT 1 cut(s) 1741
SmlI CTYRAG 8 cut(s) 92, 140, 425, 1655, 1732, 1778, 1922, 2384
SmoI CTYRAG 8 cut(s) 92, 140, 425, 1655, 1732, 1778, 1922, 2384
SpeI ACTAGT 1 cut(s) 385
SphI GCATGC 2 cut(s) 1168, 1728
SsiI CCGC 6 cut(s) 259, 1750, 1836, 2166, 2429, 2623
SspI AATATT 1 cut(s) 1243
SspMI CTAG 6 cut(s) 44, 386, 1446, 1508, 1572, 1757
StyI CCWWGG 2 cut(s) 72, 2288
SwaI ATTTAAAT 1 cut(s) 1741
TaaI ACNGT 6 cut(s) 284, 414, 1156, 1343, 1555, 2609
TaiI ACGT 3 cut(s) 1714, 2242, 2545
TatI WGTACW 1 cut(s) 657
TauI GCSGC 1 cut(s) 2431
TfiI GAWTC 5 cut(s) 328, 1821, 2300, 2379, 2634
TscAI CASTG 4 cut(s) 577, 589, 1348, 1536
TseFI GTSAC 1 cut(s) 2275
TseI GCWGC 5 cut(s) 15, 758, 1078, 1198, 2670
Tsp45I GTSAC 1 cut(s) 2275
TspGWI ACGGA 1 cut(s) 1553
TspRI CASTG 4 cut(s) 577, 589, 1348, 1536
Vha464I CTTAAG 1 cut(s) 92
VneI GTGCAC 1 cut(s) 470
VpaK11BI GGWCC 1 cut(s) 767
VspI ATTAAT 1 cut(s) 737
XapI RAATTY 5 cut(s) 682, 837, 1638, 1885, 2084
XbaI TCTAGA 1 cut(s) 1445
XceI RCATGY 6 cut(s) 56, 1003, 1039, 1168, 1222, 1728
XcmI CCANNNNNNNNNTGG 1 cut(s) 2596
XhoI CTCGAG 2 cut(s) 140, 2384
XmiI GTMKAC 1 cut(s) 2619
XmnI GAANNNNTTC 2 cut(s) 1242, 1587
XspI CTAG 6 cut(s) 44, 386, 1446, 1508, 1572, 1757
Zsp2I ATGCAT 3 cut(s) 1005, 1276, 1730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.