Rmu_ssc0000119.1_g000002

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000119.1
OG0000159
Physical Location & Seq
Forward (+)
6552 .. 9157
2606 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000119.1_g000002.1.cds

Sequence Viewer

Length: 2448 bp
atggagtttgcctctggcattgctgagacagtcttggttaggctagcctcctatgctgcccaagaagtttgcttggcttggggtgcccaacttgagcttaagaagctcaataagaccttgtcagccatcaaacttgtactccaagatggagagaggaagcaaatgcagaaccccctcatcactcattggctaggaaacctcaaagatgtttgcaacgatgctgaggatgtactcgacgaatttgagttccgaaagctccgactcgaagtgctcaccaacgaccaccggagtgccaaagcaaaggtacaccaattcttctcccgttggaatccagtcgtgtttaactttaaaatgggtcataaaatcaaagagattagagaaagactggatgagattgatgctgaaaagacaaagttttctctcattcaagttgttgaactagttgatgattgtggtgagccccaaagggcacatgttaataaaagggagacagactctttactggaaggtcatgttgttggaagagatgatgataaggaaaaaattatccttcgctttgatgacaccctttcctccaatgtcgataatgtttcagtcatttccatctttgggttagcagggttgggaaaaaccacactcgctaaatcagtgtataatgatactgcggtggagaacaaatctgatattagaatgtgggtatgcgtctcagaaaactttgatatccatacattagttcgtggcattattgctgcaactaaacaagaatgtgctgttgaaagcttagatcttatgaaaaaggggttgcaggcttcacttgtgcaccctatacataagcatcagttagaaggtctttctcaagaggattccatgactttatttaaaaacaatgcatttaacaaaggagaggagtcagactatcaacacttgataaaaattggagaagacattgtgaagaagtgtggaggggttcccttagcactagctactctagggagtttacttcactcggaaagggagcgacgtcggtggttatatgtaagagataatgaaatatggagtttgcccgaaaataacaacattatgactgcactaaaattgagctacaatgcacttccacctcacttgaagccttgctttgccttttgttcactttaccccaaggattatgcatttgaaagtgaagaaatagtccaattatggatggcacaaggcttcctcaagtcctcaagagaaaatgaagattttgacgagatgggcctggactatataaggcagttttgttccaagtctttgtttcaacttgaaggtgattggaagactactgtgcggttcaaaatccatgatttagtgcatgacttggcaatatcagtggcacgggtagagtgctcctcaattaatttccgtccctctagtgcttttgaaaaagtccgacacgtgtcaatatcggaaaaagacttgtctggggatgtggcaggagtcccggcattcattctccagtcggagaaactgcggaccattctaaatctagatagtgaagctgggatctccaatcaatattttctaaagacatgcatcttgagattcaagtatctccgtgcgctagatgtgcgtcgttctactcttgaggagctaccaagttccattggtaacttgattcatttaagatatctcaacctggacgacaatgcagagataaaacagcttcccagttccatttgcaagctcttgaatttgcagttcttaagccttggtggttgtcaggcgcttgaggagttacccaaaggcatagggaacctgatcaacctcagatatttgaatataactacacagcagatggattttccgaaaggagtatttagacgcctcaccttacttcaatccttgttcattgggacttgtgcgaatctgaaatctctgggagaagagatccaatacctcactaaccttcgtcaactggggatcggttactgtgaaaatctggagtccttgccacctaacatgaagaacttgactgcattccatactttggggatcgttgattgtaagaagcttgagttaatgaggtcgggagaaggcatcaatggtctcagatcattcgctgtcatcacatcagatttggaggctttgcccaattggcttcaagagtctgcagacactttacagagcatgcaaatcgcagaatgtgataatctcacggcacttccagagtggttgcaatatctcaccttgctggagcaactggtgattgtgaaatgccccaaattgtctgctttgccgcaagggatgcatcgcctcacatcgctgagagaattgctgattggcgggtgtcctgaattgagtaaaagatgtaaaagggaaacaggagaggattggtccaagatcaaacatgtctcaaagattgtactcgacgactctgaggatgaagatgccgatgatatcaatgattag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

815

Amino Acids

92.36

Weight (kDa)

5.64

Isoelectric Point (pI)

43.61

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1024
AccB1I GGYRCC 1 cut(s) 83
AccB7I CCANNNNNTGG 1 cut(s) 2026
AciI CCGC 5 cut(s) 665, 1327, 1510, 2276, 2322
AclWI GGATC 4 cut(s) 1550, 1921, 1967, 2039
AcsI RAATTY 2 cut(s) 239, 1729
AcvI CACGTG 1 cut(s) 1435
AcyI GRCGYC 2 cut(s) 1021, 1861
AfaI GTAC 4 cut(s) 138, 231, 306, 2403
AfiI CCNNNNNNNGG 2 cut(s) 609, 2026
AflII CTTAAG 2 cut(s) 98, 1741
AflIII ACRYGT 4 cut(s) 472, 1432, 1434, 2386
AhlI ACTAGT 1 cut(s) 439
AjnI CCWGG 2 cut(s) 1257, 1674
AjuI GAANNNNNNNTTGG 2 cut(s) 2301, 2333
AleI CACNNNNGTG 1 cut(s) 288
Alw21I GWGCWC 3 cut(s) 273, 822, 1388
Alw26I GTCTC 5 cut(s) 20, 482, 709, 2090, 2395
Alw44I GTGCAC 1 cut(s) 818
AlwI GGATC 4 cut(s) 1550, 1921, 1967, 2039
AoxI GGCC 1 cut(s) 1255
ApaLI GTGCAC 1 cut(s) 818
ApeKI GCWGC 2 cut(s) 56, 749
ApoI RAATTY 2 cut(s) 239, 1729
AseI ATTAAT 1 cut(s) 1395
AspLEI GCGC 2 cut(s) 1600, 1765
AspS9I GGNCC 3 cut(s) 1255, 1512, 2373
AsuC2I CCSGG 1 cut(s) 1481
AsuHPI GGTGA 6 cut(s) 265, 467, 1319, 1858, 2215, 2254
AsuNHI GCTAGC 1 cut(s) 43
AvaII GGWCC 2 cut(s) 1512, 2373
BaeGI GKGCMC 3 cut(s) 88, 472, 822
BaeI ACNNNNGTAYC 2 cut(s) 651, 684
BanI GGYRCC 1 cut(s) 83
BanII GRGCYC 1 cut(s) 462
BbrPI CACGTG 1 cut(s) 1435
BbsI GAAGAC 2 cut(s) 948, 1322
Bbv12I GWGCWC 3 cut(s) 273, 822, 1388
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 2 cut(s) 43, 736
BccI CCATC 6 cut(s) 134, 140, 611, 1195, 1246, 1828
BceAI ACGGC 1 cut(s) 2211
BcgI CGANNNNNNTGC 2 cut(s) 2155, 2189
BciT130I CCWGG 2 cut(s) 1259, 1676
BclI TGATCA 1 cut(s) 1797
BcnI CCSGG 1 cut(s) 1481
BcoDI GTCTC 5 cut(s) 20, 482, 709, 2090, 2395
BcuI ACTAGT 1 cut(s) 439
BfaI CTAG 8 cut(s) 44, 191, 440, 980, 989, 1410, 1526, 1601
BfmI CTRYAG 1 cut(s) 2148
BfoI RGCGCY 1 cut(s) 1766
BfrI CTTAAG 2 cut(s) 98, 1741
BglI GCCNNNNNGGC 1 cut(s) 2134
BglII AGATCT 1 cut(s) 784
BisI GCNGC 3 cut(s) 57, 750, 2276
BlsI GCNGC 3 cut(s) 58, 751, 2277
Bme1390I CCNGG 3 cut(s) 1259, 1481, 1676
Bme18I GGWCC 2 cut(s) 1512, 2373
BmgT120I GGNCC 3 cut(s) 1255, 1512, 2373
BmiI GGNNCC 3 cut(s) 85, 969, 1793
BmrFI CCNGG 3 cut(s) 1259, 1481, 1676
BmrI ACTGGG 2 cut(s) 1701, 1964
BmsI GCATC 8 cut(s) 208, 388, 844, 1581, 2085, 2274, 2296, 2416
BmtI GCTAGC 1 cut(s) 47
BmuI ACTGGG 2 cut(s) 1701, 1964
BoxI GACNNNNGTC 1 cut(s) 1435
BpiI GAAGAC 2 cut(s) 948, 1322
BplI GAGNNNNNCTC 5 cut(s) 28, 479, 511, 1373, 1405
BpmI CTGGAG 3 cut(s) 1478, 2000, 2252
Bpu10I CCTNAGC 2 cut(s) 222, 973
BpuEI CTTGAG 8 cut(s) 113, 840, 1202, 1210, 1597, 1643, 1787, 2072
BpuMI CCSGG 1 cut(s) 1481
BsaAI YACGTR 1 cut(s) 1435
BsaHI GRCGYC 2 cut(s) 1021, 1861
BsaI GGTCTC 1 cut(s) 2090
BsaJI CCNNGG 2 cut(s) 1158, 1747
BsaWI WCCGGW 1 cut(s) 285
BsaXI ACNNNNNCTCC 2 cut(s) 123, 153
Bsc4I CCNNNNNNNGG 2 cut(s) 609, 2026
Bse1I ACTGG 7 cut(s) 332, 390, 507, 1495, 1707, 1959, 2244
Bse3DI GCAATG 1 cut(s) 18
BseBI CCWGG 2 cut(s) 1259, 1676
BseDI CCNNGG 2 cut(s) 1158, 1747
BseGI GGATG 6 cut(s) 232, 394, 1206, 1471, 2289, 2425
BseLI CCNNNNNNNGG 2 cut(s) 609, 2026
BseMI GCAATG 1 cut(s) 18
BseMII CTCAG 7 cut(s) 15, 213, 720, 1819, 2101, 2294, 2406
BseNI ACTGG 7 cut(s) 332, 390, 507, 1495, 1707, 1959, 2244
BseRI GAGGAG 4 cut(s) 920, 1378, 1640, 1784
BseSI GKGCMC 3 cut(s) 88, 472, 822
BseXI GCAGC 2 cut(s) 43, 736
BseYI CCCAGC 1 cut(s) 1538
BsgI GTGCAG 1 cut(s) 1071
BshFI GGCC 1 cut(s) 1257
BshNI GGYRCC 1 cut(s) 83
BsiHKAI GWGCWC 3 cut(s) 273, 822, 1388
BsiSI CCGG 2 cut(s) 286, 1481
BslFI GGGAC 3 cut(s) 1389, 1463, 1906
BslI CCNNNNNNNGG 2 cut(s) 609, 2026
BsmAI GTCTC 5 cut(s) 20, 482, 709, 2090, 2395
BsmBI CGTCTC 1 cut(s) 709
BsmFI GGGAC 3 cut(s) 1389, 1463, 1906
BsmI GAATGC 2 cut(s) 1484, 2015
BsnI GGCC 1 cut(s) 1257
Bso31I GGTCTC 1 cut(s) 2090
Bsp1286I GDGCHC 6 cut(s) 88, 273, 462, 472, 822, 1388
Bsp143I GATC 8 cut(s) 784, 1542, 1797, 1926, 1959, 2031, 2090, 2379
BspACI CCGC 5 cut(s) 665, 1327, 1510, 2276, 2322
BspANI GGCC 1 cut(s) 1257
BspCNI CTCAG 7 cut(s) 16, 214, 719, 1818, 2100, 2295, 2407
BspLI GGNNCC 3 cut(s) 85, 969, 1793
BspMAI CTGCAG 1 cut(s) 2152
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 4 cut(s) 1550, 1921, 1967, 2039
BspT107I GGYRCC 1 cut(s) 83
BspTI CTTAAG 2 cut(s) 98, 1741
BspTNI GGTCTC 1 cut(s) 2090
BsrDI GCAATG 1 cut(s) 18
BsrI ACTGG 7 cut(s) 332, 390, 507, 1495, 1707, 1959, 2244
BssECI CCNNGG 2 cut(s) 1158, 1747
BssMI GATC 8 cut(s) 784, 1542, 1797, 1926, 1959, 2031, 2090, 2379
BssNI GRCGYC 2 cut(s) 1021, 1861
BssT1I CCWWGG 2 cut(s) 1158, 1747
Bst2UI CCWGG 2 cut(s) 1259, 1676
Bst4CI ACNGT 3 cut(s) 31, 1324, 1970
Bst6I CTCTTC 2 cut(s) 517, 1917
BstACI GRCGYC 2 cut(s) 1021, 1861
BstAFI CTTAAG 2 cut(s) 98, 1741
BstAPI GCANNNNNTGC 1 cut(s) 2284
BstBAI YACGTR 1 cut(s) 1435
BstC8I GCNNGC 4 cut(s) 45, 807, 1721, 2168
BstDEI CTNAG 9 cut(s) 24, 222, 706, 781, 973, 1805, 2087, 2303, 2415
BstF5I GGATG 6 cut(s) 232, 394, 1206, 1471, 2289, 2425
BstH2I RGCGCY 1 cut(s) 1766
BstHHI GCGC 2 cut(s) 1600, 1765
BstKTI GATC 8 cut(s) 787, 1545, 1800, 1929, 1962, 2034, 2093, 2382
BstMAI GTCTC 5 cut(s) 20, 482, 709, 2090, 2395
BstMBI GATC 8 cut(s) 784, 1542, 1797, 1926, 1959, 2031, 2090, 2379
BstMWI GCNNNNNNNGC 6 cut(s) 53, 83, 103, 1606, 2134, 2284
BstNI CCWGG 2 cut(s) 1259, 1676
BstNSI RCATGY 4 cut(s) 476, 1572, 2170, 2390
BstPAI GACNNNNGTC 1 cut(s) 1435
BstSCI CCNGG 3 cut(s) 1257, 1479, 1674
BstSFI CTRYAG 1 cut(s) 2148
BstSLI GKGCMC 3 cut(s) 88, 472, 822
BstV1I GCAGC 2 cut(s) 43, 736
BstV2I GAAGAC 2 cut(s) 948, 1322
BstX2I RGATCY 3 cut(s) 784, 1542, 1926
BstYI RGATCY 3 cut(s) 784, 1542, 1926
BsuRI GGCC 1 cut(s) 1257
BtgZI GCGATG 2 cut(s) 2273, 2283
BtsCI GGATG 6 cut(s) 232, 394, 1206, 1471, 2289, 2425
BtsIMutI CAGTG 2 cut(s) 654, 1374
Cac8I GCNNGC 4 cut(s) 45, 807, 1721, 2168
CfoI GCGC 2 cut(s) 1600, 1765
Cfr13I GGNCC 3 cut(s) 1255, 1512, 2373
CseI GACGC 3 cut(s) 691, 1598, 1869
Csp6I GTAC 4 cut(s) 137, 230, 305, 2402
CspCI CAANNNNNGTGG 4 cut(s) 1104, 1139, 1350, 1385
CviAII CATG 9 cut(s) 473, 512, 868, 1340, 1352, 1569, 1999, 2167, 2387
CviQI GTAC 4 cut(s) 137, 230, 305, 2402
DdeI CTNAG 9 cut(s) 24, 222, 706, 781, 973, 1805, 2087, 2303, 2415
DpnI GATC 8 cut(s) 786, 1544, 1799, 1928, 1961, 2033, 2092, 2381
DpnII GATC 8 cut(s) 784, 1542, 1797, 1926, 1959, 2031, 2090, 2379
DraI TTTAAA 2 cut(s) 349, 880
Eam1104I CTCTTC 2 cut(s) 517, 1917
EarI CTCTTC 2 cut(s) 517, 1917
Eco130I CCWWGG 2 cut(s) 1158, 1747
Eco24I GRGCYC 1 cut(s) 462
Eco31I GGTCTC 1 cut(s) 2090
Eco32I GATATC 3 cut(s) 721, 1667, 2437
Eco47I GGWCC 2 cut(s) 1512, 2373
Eco72I CACGTG 1 cut(s) 1435
EcoRII CCWGG 2 cut(s) 1257, 1674
EcoRV GATATC 3 cut(s) 721, 1667, 2437
EcoT14I CCWWGG 2 cut(s) 1158, 1747
EcoT22I ATGCAT 4 cut(s) 892, 1171, 1574, 2289
EcoT38I GRGCYC 1 cut(s) 462
ErhI CCWWGG 2 cut(s) 1158, 1747
Esp3I CGTCTC 1 cut(s) 709
FaeI CATG 9 cut(s) 476, 515, 871, 1343, 1355, 1572, 2002, 2170, 2390
FalI AAGNNNNNCTT 2 cut(s) 1118, 1150
FaqI GGGAC 3 cut(s) 1389, 1463, 1906
FatI CATG 9 cut(s) 472, 511, 867, 1339, 1351, 1568, 1998, 2166, 2386
FauI CCCGC 1 cut(s) 2315
FbaI TGATCA 1 cut(s) 1797
Fnu4HI GCNGC 3 cut(s) 57, 750, 2276
FokI GGATG 6 cut(s) 239, 401, 1213, 1478, 2296, 2432
FriOI GRGCYC 1 cut(s) 462
Fsp4HI GCNGC 3 cut(s) 57, 750, 2276
FspBI CTAG 8 cut(s) 44, 191, 440, 980, 989, 1410, 1526, 1601
GlaI GCGC 2 cut(s) 1599, 1764
GluI GCNGC 3 cut(s) 57, 750, 2276
GsaI CCCAGC 1 cut(s) 1542
GsuI CTGGAG 3 cut(s) 1478, 2000, 2252
HaeII RGCGCY 1 cut(s) 1766
HaeIII GGCC 1 cut(s) 1257
HapII CCGG 2 cut(s) 286, 1481
HgaI GACGC 3 cut(s) 691, 1598, 1869
HhaI GCGC 2 cut(s) 1600, 1765
Hin1I GRCGYC 2 cut(s) 1021, 1861
Hin1II CATG 9 cut(s) 476, 515, 871, 1343, 1355, 1572, 2002, 2170, 2390
Hin6I GCGC 2 cut(s) 1598, 1763
HinP1I GCGC 2 cut(s) 1598, 1763
HincII GTYRAC 1 cut(s) 1952
HindII GTYRAC 1 cut(s) 1952
HindIII AAGCTT 2 cut(s) 778, 2048
HpaII CCGG 2 cut(s) 286, 1481
HphI GGTGA 6 cut(s) 265, 467, 1319, 1858, 2215, 2254
Hpy166II GTNNAC 5 cut(s) 307, 820, 998, 1148, 1952
Hpy8I GTNNAC 5 cut(s) 307, 820, 998, 1148, 1952
Hpy99I CGWCG 5 cut(s) 239, 1023, 1026, 1614, 2411
HpyAV CCTTC 6 cut(s) 500, 560, 839, 1298, 1955, 2066
HpyCH4III ACNGT 3 cut(s) 31, 1324, 1970
HpyCH4IV ACGT 2 cut(s) 1021, 1434
HpyF10VI GCNNNNNNNGC 6 cut(s) 53, 83, 103, 1606, 2134, 2284
HpyF3I CTNAG 9 cut(s) 24, 222, 706, 781, 973, 1805, 2087, 2303, 2415
HpySE526I ACGT 2 cut(s) 1021, 1434
Hsp92I GRCGYC 2 cut(s) 1021, 1861
Hsp92II CATG 9 cut(s) 476, 515, 871, 1343, 1355, 1572, 2002, 2170, 2390
HspAI GCGC 2 cut(s) 1598, 1763
Ksp22I TGATCA 1 cut(s) 1797
Kzo9I GATC 8 cut(s) 784, 1542, 1797, 1926, 1959, 2031, 2090, 2379
LmnI GCTCC 5 cut(s) 261, 1015, 1391, 1627, 2233
Lsp1109I GCAGC 2 cut(s) 43, 736
LweI GCATC 8 cut(s) 208, 388, 844, 1581, 2085, 2274, 2296, 2416
MaeI CTAG 8 cut(s) 44, 191, 440, 980, 989, 1410, 1526, 1601
MaeII ACGT 2 cut(s) 1021, 1434
MaeIII GTNAC 3 cut(s) 1646, 1773, 1964
MalI GATC 8 cut(s) 786, 1544, 1799, 1928, 1961, 2033, 2092, 2381
MboI GATC 8 cut(s) 784, 1542, 1797, 1926, 1959, 2031, 2090, 2379
MfeI CAATTG 1 cut(s) 2131
MflI RGATCY 3 cut(s) 784, 1542, 1926
MhlI GDGCHC 6 cut(s) 88, 273, 462, 472, 822, 1388
MlyI GAGTC 7 cut(s) 255, 488, 917, 1485, 1991, 2153, 2405
MmeI TCCRAC 5 cut(s) 283, 305, 499, 1453, 1479
Mph1103I ATGCAT 4 cut(s) 892, 1171, 1574, 2289
MslI CAYNNNNRTG 1 cut(s) 288
MspCI CTTAAG 2 cut(s) 98, 1741
MspI CCGG 2 cut(s) 286, 1481
MspR9I CCNGG 3 cut(s) 1259, 1481, 1676
MunI CAATTG 1 cut(s) 2131
Mva1269I GAATGC 2 cut(s) 1484, 2015
MvaI CCWGG 2 cut(s) 1259, 1676
MwoI GCNNNNNNNGC 6 cut(s) 53, 83, 103, 1606, 2134, 2284
NciI CCSGG 1 cut(s) 1481
NdeII GATC 8 cut(s) 784, 1542, 1797, 1926, 1959, 2031, 2090, 2379
NheI GCTAGC 1 cut(s) 43
NlaIII CATG 9 cut(s) 476, 515, 871, 1343, 1355, 1572, 2002, 2170, 2390
NlaIV GGNNCC 3 cut(s) 85, 969, 1793
NsiI ATGCAT 4 cut(s) 892, 1171, 1574, 2289
NspI RCATGY 4 cut(s) 476, 1572, 2170, 2390
OliI CACNNNNGTG 1 cut(s) 288
PaeI GCATGC 1 cut(s) 2170
PciI ACATGT 2 cut(s) 472, 2386
PctI GAATGC 2 cut(s) 1484, 2015
PfeI GAWTC 5 cut(s) 328, 863, 1581, 1654, 1903
PflFI GACNNNGTC 1 cut(s) 118
PflMI CCANNNNNTGG 1 cut(s) 2026
PkrI GCNGC 3 cut(s) 58, 751, 2277
PleI GAGTC 7 cut(s) 255, 488, 916, 1484, 1990, 2152, 2405
PmaCI CACGTG 1 cut(s) 1435
PmlI CACGTG 1 cut(s) 1435
PpsI GAGTC 7 cut(s) 255, 488, 916, 1484, 1990, 2152, 2405
Ppu21I YACGTR 1 cut(s) 1435
PscI ACATGT 2 cut(s) 472, 2386
PshAI GACNNNNGTC 1 cut(s) 1435
PshBI ATTAAT 1 cut(s) 1395
Psp6I CCWGG 2 cut(s) 1257, 1674
PspCI CACGTG 1 cut(s) 1435
PspFI CCCAGC 1 cut(s) 1538
PspGI CCWGG 2 cut(s) 1257, 1674
PspN4I GGNNCC 3 cut(s) 85, 969, 1793
PspPI GGNCC 3 cut(s) 1255, 1512, 2373
PstI CTGCAG 1 cut(s) 2152
PsuI RGATCY 3 cut(s) 784, 1542, 1926
PsyI GACNNNGTC 1 cut(s) 118
RsaI GTAC 4 cut(s) 138, 231, 306, 2403
RsaNI GTAC 4 cut(s) 137, 230, 305, 2402
RseI CAYNNNNRTG 1 cut(s) 288
SatI GCNGC 3 cut(s) 57, 750, 2276
Sau3AI GATC 8 cut(s) 784, 1542, 1797, 1926, 1959, 2031, 2090, 2379
Sau96I GGNCC 3 cut(s) 1255, 1512, 2373
SchI GAGTC 7 cut(s) 255, 488, 917, 1485, 1991, 2153, 2405
ScrFI CCNGG 3 cut(s) 1259, 1481, 1676
SduI GDGCHC 6 cut(s) 88, 273, 462, 472, 822, 1388
SfaNI GCATC 8 cut(s) 208, 388, 844, 1581, 2085, 2274, 2296, 2416
SfcI CTRYAG 1 cut(s) 2148
SinI GGWCC 2 cut(s) 1512, 2373
SmiMI CAYNNNNRTG 1 cut(s) 288
SpeI ACTAGT 1 cut(s) 439
SphI GCATGC 1 cut(s) 2170
SsiI CCGC 5 cut(s) 665, 1327, 1510, 2276, 2322
SspI AATATT 1 cut(s) 1556
SspMI CTAG 8 cut(s) 44, 191, 440, 980, 989, 1410, 1526, 1601
StyD4I CCNGG 3 cut(s) 1257, 1479, 1674
StyI CCWWGG 2 cut(s) 1158, 1747
TaaI ACNGT 3 cut(s) 31, 1324, 1970
TaiI ACGT 2 cut(s) 1024, 1437
TaqI TCGA 4 cut(s) 234, 264, 582, 2406
TatI WGTACW 3 cut(s) 136, 229, 2401
TauI GCSGC 1 cut(s) 2278
TfiI GAWTC 5 cut(s) 328, 863, 1581, 1654, 1903
TscAI CASTG 2 cut(s) 654, 1374
TseI GCWGC 2 cut(s) 56, 749
TspDTI ATGAA 8 cut(s) 806, 1062, 1251, 1477, 1646, 1876, 2015, 2436
TspGWI ACGGA 2 cut(s) 1391, 1583
TspRI CASTG 2 cut(s) 654, 1374
Tth111I GACNNNGTC 1 cut(s) 118
Van91I CCANNNNNTGG 1 cut(s) 2026
Vha464I CTTAAG 2 cut(s) 98, 1741
VneI GTGCAC 1 cut(s) 818
VpaK11BI GGWCC 2 cut(s) 1512, 2373
VspI ATTAAT 1 cut(s) 1395
XapI RAATTY 2 cut(s) 239, 1729
XbaI TCTAGA 1 cut(s) 1525
XceI RCATGY 4 cut(s) 476, 1572, 2170, 2390
XspI CTAG 8 cut(s) 44, 191, 440, 980, 989, 1410, 1526, 1601
ZraI GACGTC 1 cut(s) 1022
Zsp2I ATGCAT 4 cut(s) 892, 1171, 1574, 2289
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.