Rmu_ssc0000119.1_g000015

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000119.1
OG0000159
Physical Location & Seq
Forward (+)
52375 .. 54966
2592 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000119.1_g000015.1.cds

Sequence Viewer

Length: 2592 bp
atggaatttgccactagcgttgcagagagcgtcttgggtaggctagcctcttatgctgcccaagaaatctgcttggcatggggtgcccaacttgagttgcaaaagctcaaacagaccttgttagacatcaaagacgtcctccaggatgcggaggaaaagcaggtgaacaatcctgtaatcagccgttggttaggagaccttaaagatgtttgcaacgatgccgaggatgtattggacgaatttgagttccgaaagctccgactcgaagtgctcatcaacaaccaccggagagtcaaaggagaggtacaccaattcttctctcgttggaattccgttgtgtttaacttcaaattgggtcataaattaagacgcattagagaacgtctagttcaaattgataatgacggaaagaccaagttttctctcgttattaaagttgttcaacaaactgaagtttgtccggcacccttgaggccgactggtattaaaaaggagacagactctttacttgaaggtcctgttgttggaagagatggtgatagggaaaaaattatccatctctttgatgacaccctttcctccggtgttgataatgtttcagttatttccatctttgggttaggagggttgggaaaaactacacttgctaaatcagtgtataatgatgctatgttacaaaaaaaatttgcatatcaaatgtggatatgcgtctcagaaacctttgatatccatacattagttcgtggcattattgctgcaactaaacaagaatgtgctggtgaaagtttagatcttatgaaaagggggttgcaagatattttgagagataaaaagtttttgttagtgttggacgatgtctgggatacagagtcgataggagttacaaatcagaaatggagagagttaaaaactttgttagatgttggagccagaggaagtaaaatcatcgttacaacacgtaatgaatcagtagcttcacttgtacaccctatacataagcatcagttaagaggtctttctcaagaggattccatgactttgtttaaaaaaaatgcatttaacgaagcagaggagtcacactatcaacacttgataaaaattggagaggacattgtgcataagtgtggaggggttcccttggcactagctactctagggagtctgcttcgcttgaaaagggagccacaagactgggtacaagtaagagataataaaatatggaatatgtcaggaaatgacaacattatggctgcattaaaattgagctacaatgcactgccatctcacttgaaaccctgttttgccttttgttcactttaccccaaggattatcaatttgtaagtgaagaaataatcccattatggatggcacaaggcttcctcaagtccttgagagaaaatgaagattttaccgagatgggcctagactatataaggcagttttgttccaagtctttgtttcaacctgaagctgatttgaagactgctgtgcagttcaaaatccatgatttagtgcatgacttggcaatatcagtagcacgggtagattgctcctcaattaatttccgtccctccagtgcttttgaaaaagtccgacacgtgtcaatatcggaaaaagacttgtctggggatgtggtaggagtcccggcattcattctcctgtcggagaaactgcggaccattctaaatctagatagtgaagctgggatctccaatcaatattttctaaagacatgcatcttgagattcaagtatttgcgtgcgctagatgtgcgtggttctactcttgaggagctaccaagttccattggtaacttgattcatttaagatatctcaacctgggcggaaatgcaaagataaaacagcttcccagttccatttgcaagctcttgaatttgcagctcttaagccttgcccgttgtgaggcacttaaggagttacccaaaggcatagggaacctgatcaatctcagatttttgcatataactacacggcagatatattttccgaaaggagtatttagacgcctcacctttcttcaatccttgttcattggggattgtgcgaatctgaaatctctgggagaagagatccaatacctcactaaccttcgtcaactgtggatcggttactgtgaaaatctggagtccttgccacctaacatgaagaacttgactgcattccatactatggcgatctataattgtaagaagcttgagttaatgaggtcgggagaaggcatcaaaggtcttcgatcattatatatccaaggtagttcagatttggaggctttgcccaattggcttcaagagtctgcagacactttacagaacatggtgatcggagagtgtgataatctcacggcacttccagagtggttacaaaatctcaccttgctggagcaactgatgattgggtactgccccaaattgtctgctttgccgcaagggatgcatcgcctcactgcgctgagagaattgctgattggcgggtgtcctgaattgagtaaaagatgtaaaagggaaacaggagaggattggtccaagatcaaacatgtctcaaagattgtactcgacggaagatgcccatga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

863

Amino Acids

97.68

Weight (kDa)

8.21

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 151
AatII GACGTC 1 cut(s) 138
Acc36I ACCTGC 1 cut(s) 151
AccB1I GGYRCC 2 cut(s) 83, 463
AccB7I CCANNNNNTGG 1 cut(s) 2191
AciI CCGC 5 cut(s) 149, 1675, 1845, 2444, 2490
AclWI GGATC 3 cut(s) 1715, 2086, 2132
AcsI RAATTY 5 cut(s) 5, 239, 328, 683, 1894
AcuI CTGAAG 2 cut(s) 471, 1488
AcvI CACGTG 1 cut(s) 1600
AcyI GRCGYC 2 cut(s) 135, 2026
AfaI GTAC 5 cut(s) 306, 984, 1197, 2420, 2571
AfiI CCNNNNNNNGG 5 cut(s) 148, 524, 615, 1924, 2191
AflII CTTAAG 2 cut(s) 1906, 1931
AflIII ACRYGT 4 cut(s) 956, 1597, 1599, 2554
AjnI CCWGG 2 cut(s) 141, 1839
AjuI GAANNNNNNNTTGG 2 cut(s) 2469, 2501
Alw21I GWGCWC 1 cut(s) 273
Alw26I GTCTC 4 cut(s) 189, 488, 715, 2563
AlwI GGATC 3 cut(s) 1715, 2086, 2132
AoxI GGCC 2 cut(s) 473, 1420
ApeKI GCWGC 4 cut(s) 56, 755, 1250, 1900
ApoI RAATTY 5 cut(s) 5, 239, 328, 683, 1894
AseI ATTAAT 1 cut(s) 1560
AspLEI GCGC 2 cut(s) 1765, 2470
AspS9I GGNCC 4 cut(s) 515, 1420, 1677, 2541
AsuC2I CCSGG 1 cut(s) 1646
AsuHPI GGTGA 6 cut(s) 175, 548, 791, 2023, 2350, 2383
AsuNHI GCTAGC 1 cut(s) 43
AvaII GGWCC 3 cut(s) 515, 1677, 2541
BaeGI GKGCMC 1 cut(s) 88
BanI GGYRCC 2 cut(s) 83, 463
BbrPI CACGTG 1 cut(s) 1600
BbsI GAAGAC 2 cut(s) 1487, 2243
Bbv12I GWGCWC 1 cut(s) 273
BbvI GCAGC 4 cut(s) 43, 742, 1237, 1912
BccI CCATC 6 cut(s) 527, 564, 617, 1288, 1360, 1411
BceAI ACGGC 3 cut(s) 168, 2009, 2379
BciT130I CCWGG 2 cut(s) 143, 1841
BciVI GTATCC 1 cut(s) 856
BclI TGATCA 1 cut(s) 1962
BcnI CCSGG 1 cut(s) 1646
BcoDI GTCTC 4 cut(s) 189, 488, 715, 2563
BfaI CTAG 8 cut(s) 15, 44, 386, 1145, 1154, 1424, 1691, 1766
BfmI CTRYAG 1 cut(s) 2316
BfrI CTTAAG 2 cut(s) 1906, 1931
BfuAI ACCTGC 1 cut(s) 151
BfuI GTATCC 1 cut(s) 856
BglI GCCNNNNNGGC 1 cut(s) 2302
BglII AGATCT 1 cut(s) 790
BisI GCNGC 5 cut(s) 57, 756, 1251, 1901, 2444
BlsI GCNGC 5 cut(s) 58, 757, 1252, 1902, 2445
Bme1390I CCNGG 3 cut(s) 143, 1646, 1841
Bme18I GGWCC 3 cut(s) 515, 1677, 2541
BmgT120I GGNCC 4 cut(s) 515, 1420, 1677, 2541
BmiI GGNNCC 6 cut(s) 85, 465, 928, 1134, 1182, 1958
BmrFI CCNGG 3 cut(s) 143, 1646, 1841
BmrI ACTGGG 2 cut(s) 1201, 1866
BmsI GCATC 9 cut(s) 136, 208, 655, 1009, 1746, 2250, 2442, 2464, 2573
BmtI GCTAGC 1 cut(s) 47
BmuI ACTGGG 2 cut(s) 1201, 1866
BoxI GACNNNNGTC 1 cut(s) 1600
BpiI GAAGAC 2 cut(s) 1487, 2243
BplI GAGNNNNNCTC 2 cut(s) 485, 517
BpmI CTGGAG 4 cut(s) 125, 1558, 2165, 2420
BpuEI CTTGAG 8 cut(s) 113, 490, 1005, 1367, 1411, 1762, 1808, 2237
BpuMI CCSGG 1 cut(s) 1646
BsaAI YACGTR 2 cut(s) 959, 1600
BsaHI GRCGYC 2 cut(s) 135, 2026
BsaI GGTCTC 1 cut(s) 189
BsaJI CCNNGG 5 cut(s) 222, 1137, 1323, 1840, 2269
BsaWI WCCGGW 2 cut(s) 285, 581
Bsc4I CCNNNNNNNGG 5 cut(s) 148, 524, 615, 1924, 2191
Bse1I ACTGG 4 cut(s) 484, 1196, 1575, 1872
BseBI CCWGG 2 cut(s) 143, 1841
BseDI CCNNGG 5 cut(s) 222, 1137, 1323, 1840, 2269
BseGI GGATG 5 cut(s) 151, 232, 1371, 1636, 2457
BseLI CCNNNNNNNGG 5 cut(s) 148, 524, 615, 1924, 2191
BseMII CTCAG 3 cut(s) 726, 1984, 2462
BseNI ACTGG 4 cut(s) 484, 1196, 1575, 1872
BseRI GAGGAG 3 cut(s) 1085, 1543, 1805
BseSI GKGCMC 1 cut(s) 88
BseXI GCAGC 4 cut(s) 43, 742, 1237, 1912
BseYI CCCAGC 1 cut(s) 1703
BsgI GTGCAG 1 cut(s) 1511
BshFI GGCC 2 cut(s) 475, 1422
BshNI GGYRCC 2 cut(s) 83, 463
BsiHKAI GWGCWC 1 cut(s) 273
BsiSI CCGG 4 cut(s) 286, 461, 582, 1646
BslFI GGGAC 2 cut(s) 1554, 1628
BslI CCNNNNNNNGG 5 cut(s) 148, 524, 615, 1924, 2191
BsmAI GTCTC 4 cut(s) 189, 488, 715, 2563
BsmBI CGTCTC 1 cut(s) 715
BsmFI GGGAC 2 cut(s) 1554, 1628
BsmI GAATGC 2 cut(s) 1649, 2180
BsnI GGCC 2 cut(s) 475, 1422
Bso31I GGTCTC 1 cut(s) 189
Bsp1286I GDGCHC 2 cut(s) 88, 273
Bsp1407I TGTACA 1 cut(s) 982
Bsp143I GATC 9 cut(s) 790, 1707, 1962, 2091, 2124, 2196, 2255, 2340, 2547
BspACI CCGC 5 cut(s) 149, 1675, 1845, 2444, 2490
BspANI GGCC 2 cut(s) 475, 1422
BspCNI CTCAG 3 cut(s) 725, 1983, 2463
BspLI GGNNCC 6 cut(s) 85, 465, 928, 1134, 1182, 1958
BspMAI CTGCAG 1 cut(s) 2320
BspMI ACCTGC 1 cut(s) 151
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 3 cut(s) 1715, 2086, 2132
BspT107I GGYRCC 2 cut(s) 83, 463
BspTI CTTAAG 2 cut(s) 1906, 1931
BspTNI GGTCTC 1 cut(s) 189
BsrGI TGTACA 1 cut(s) 982
BsrI ACTGG 4 cut(s) 484, 1196, 1575, 1872
BssECI CCNNGG 5 cut(s) 222, 1137, 1323, 1840, 2269
BssMI GATC 9 cut(s) 790, 1707, 1962, 2091, 2124, 2196, 2255, 2340, 2547
BssNI GRCGYC 2 cut(s) 135, 2026
BssT1I CCWWGG 3 cut(s) 1137, 1323, 2269
Bst2UI CCWGG 2 cut(s) 143, 1841
Bst4CI ACNGT 2 cut(s) 2121, 2135
Bst6I CTCTTC 2 cut(s) 523, 2082
BstACI GRCGYC 2 cut(s) 135, 2026
BstAFI CTTAAG 2 cut(s) 1906, 1931
BstAPI GCANNNNNTGC 2 cut(s) 83, 2452
BstAUI TGTACA 1 cut(s) 982
BstBAI YACGTR 2 cut(s) 959, 1600
BstC8I GCNNGC 3 cut(s) 45, 1761, 1886
BstDEI CTNAG 3 cut(s) 712, 1970, 2471
BstF5I GGATG 5 cut(s) 151, 232, 1371, 1636, 2457
BstHHI GCGC 2 cut(s) 1765, 2470
BstKTI GATC 9 cut(s) 793, 1710, 1965, 2094, 2127, 2199, 2258, 2343, 2550
BstMAI GTCTC 4 cut(s) 189, 488, 715, 2563
BstMBI GATC 9 cut(s) 790, 1707, 1962, 2091, 2124, 2196, 2255, 2340, 2547
BstMWI GCNNNNNNNGC 5 cut(s) 53, 83, 1771, 2302, 2452
BstNI CCWGG 2 cut(s) 143, 1841
BstNSI RCATGY 2 cut(s) 1737, 2558
BstPAI GACNNNNGTC 1 cut(s) 1600
BstSCI CCNGG 3 cut(s) 141, 1644, 1839
BstSFI CTRYAG 1 cut(s) 2316
BstSLI GKGCMC 1 cut(s) 88
BstV1I GCAGC 4 cut(s) 43, 742, 1237, 1912
BstV2I GAAGAC 2 cut(s) 1487, 2243
BstX2I RGATCY 3 cut(s) 790, 1707, 2091
BstXI CCANNNNNNTGG 1 cut(s) 1191
BstYI RGATCY 3 cut(s) 790, 1707, 2091
BsuI GTATCC 1 cut(s) 856
BsuRI GGCC 2 cut(s) 475, 1422
BtgZI GCGATG 1 cut(s) 2441
BtsCI GGATG 5 cut(s) 151, 232, 1371, 1636, 2457
BtsI GCAGTG 2 cut(s) 1274, 2463
BtsIMutI CAGTG 4 cut(s) 660, 1274, 1582, 2463
BveI ACCTGC 1 cut(s) 151
Cac8I GCNNGC 3 cut(s) 45, 1761, 1886
CfoI GCGC 2 cut(s) 1765, 2470
Cfr13I GGNCC 4 cut(s) 515, 1420, 1677, 2541
CseI GACGC 4 cut(s) 19, 378, 697, 2034
Csp6I GTAC 5 cut(s) 305, 983, 1196, 2419, 2570
CspCI CAANNNNNGTGG 1 cut(s) 36
CviAII CATG 9 cut(s) 78, 1033, 1505, 1517, 1734, 2164, 2335, 2555, 2589
CviQI GTAC 5 cut(s) 305, 983, 1196, 2419, 2570
DdeI CTNAG 3 cut(s) 712, 1970, 2471
DpnI GATC 9 cut(s) 792, 1709, 1964, 2093, 2126, 2198, 2257, 2342, 2549
DpnII GATC 9 cut(s) 790, 1707, 1962, 2091, 2124, 2196, 2255, 2340, 2547
DraI TTTAAA 1 cut(s) 1045
Eam1104I CTCTTC 2 cut(s) 523, 2082
EarI CTCTTC 2 cut(s) 523, 2082
EciI GGCGGA 1 cut(s) 1860
Eco130I CCWWGG 3 cut(s) 1137, 1323, 2269
Eco31I GGTCTC 1 cut(s) 189
Eco32I GATATC 2 cut(s) 727, 1832
Eco47I GGWCC 3 cut(s) 515, 1677, 2541
Eco57I CTGAAG 2 cut(s) 471, 1488
Eco72I CACGTG 1 cut(s) 1600
EcoO109I RGGNCCY 1 cut(s) 515
EcoRI GAATTC 1 cut(s) 328
EcoRII CCWGG 2 cut(s) 141, 1839
EcoRV GATATC 2 cut(s) 727, 1832
EcoT14I CCWWGG 3 cut(s) 1137, 1323, 2269
EcoT22I ATGCAT 3 cut(s) 1057, 1739, 2457
ErhI CCWWGG 3 cut(s) 1137, 1323, 2269
Esp3I CGTCTC 1 cut(s) 715
FaeI CATG 9 cut(s) 81, 1036, 1508, 1520, 1737, 2167, 2338, 2558, 2592
FaqI GGGAC 2 cut(s) 1554, 1628
FatI CATG 9 cut(s) 77, 1032, 1504, 1516, 1733, 2163, 2334, 2554, 2588
FauI CCCGC 1 cut(s) 2483
FbaI TGATCA 1 cut(s) 1962
Fnu4HI GCNGC 5 cut(s) 57, 756, 1251, 1901, 2444
FokI GGATG 5 cut(s) 158, 239, 1378, 1643, 2464
Fsp4HI GCNGC 5 cut(s) 57, 756, 1251, 1901, 2444
FspBI CTAG 8 cut(s) 15, 44, 386, 1145, 1154, 1424, 1691, 1766
GlaI GCGC 2 cut(s) 1764, 2469
GluI GCNGC 5 cut(s) 57, 756, 1251, 1901, 2444
GsaI CCCAGC 1 cut(s) 1707
GsuI CTGGAG 4 cut(s) 125, 1558, 2165, 2420
HaeIII GGCC 2 cut(s) 475, 1422
HapII CCGG 4 cut(s) 286, 461, 582, 1646
HgaI GACGC 4 cut(s) 19, 378, 697, 2034
HhaI GCGC 2 cut(s) 1765, 2470
Hin1I GRCGYC 2 cut(s) 135, 2026
Hin1II CATG 9 cut(s) 81, 1036, 1508, 1520, 1737, 2167, 2338, 2558, 2592
Hin6I GCGC 2 cut(s) 1763, 2468
HinP1I GCGC 2 cut(s) 1763, 2468
HincII GTYRAC 1 cut(s) 2117
HindII GTYRAC 1 cut(s) 2117
HindIII AAGCTT 1 cut(s) 2213
HpaII CCGG 4 cut(s) 286, 461, 582, 1646
HphI GGTGA 6 cut(s) 175, 548, 791, 2023, 2350, 2383
Hpy166II GTNNAC 5 cut(s) 166, 307, 985, 1313, 2117
Hpy8I GTNNAC 5 cut(s) 166, 307, 985, 1313, 2117
Hpy99I CGWCG 1 cut(s) 2579
HpyAV CCTTC 3 cut(s) 506, 2120, 2231
HpyCH4III ACNGT 2 cut(s) 2121, 2135
HpyCH4IV ACGT 4 cut(s) 135, 382, 958, 1599
HpyF10VI GCNNNNNNNGC 5 cut(s) 53, 83, 1771, 2302, 2452
HpyF3I CTNAG 3 cut(s) 712, 1970, 2471
HpySE526I ACGT 4 cut(s) 135, 382, 958, 1599
Hsp92I GRCGYC 2 cut(s) 135, 2026
Hsp92II CATG 9 cut(s) 81, 1036, 1508, 1520, 1737, 2167, 2338, 2558, 2592
HspAI GCGC 2 cut(s) 1763, 2468
Ksp22I TGATCA 1 cut(s) 1962
Kzo9I GATC 9 cut(s) 790, 1707, 1962, 2091, 2124, 2196, 2255, 2340, 2547
LmnI GCTCC 6 cut(s) 261, 926, 1180, 1556, 1792, 2401
Lsp1109I GCAGC 4 cut(s) 43, 742, 1237, 1912
LweI GCATC 9 cut(s) 136, 208, 655, 1009, 1746, 2250, 2442, 2464, 2573
MaeI CTAG 8 cut(s) 15, 44, 386, 1145, 1154, 1424, 1691, 1766
MaeII ACGT 4 cut(s) 135, 382, 958, 1599
MaeIII GTNAC 8 cut(s) 672, 880, 949, 1074, 1811, 1938, 2129, 2379
MalI GATC 9 cut(s) 792, 1709, 1964, 2093, 2126, 2198, 2257, 2342, 2549
MboI GATC 9 cut(s) 790, 1707, 1962, 2091, 2124, 2196, 2255, 2340, 2547
MfeI CAATTG 1 cut(s) 2299
MflI RGATCY 3 cut(s) 790, 1707, 2091
MhlI GDGCHC 2 cut(s) 88, 273
MlyI GAGTC 9 cut(s) 255, 300, 494, 878, 1082, 1168, 1650, 2156, 2321
MmeI TCCRAC 7 cut(s) 283, 305, 505, 828, 904, 1618, 1644
Mph1103I ATGCAT 3 cut(s) 1057, 1739, 2457
MslI CAYNNNNRTG 1 cut(s) 1122
MspCI CTTAAG 2 cut(s) 1906, 1931
MspI CCGG 4 cut(s) 286, 461, 582, 1646
MspR9I CCNGG 3 cut(s) 143, 1646, 1841
MunI CAATTG 1 cut(s) 2299
Mva1269I GAATGC 2 cut(s) 1649, 2180
MvaI CCWGG 2 cut(s) 143, 1841
MwoI GCNNNNNNNGC 5 cut(s) 53, 83, 1771, 2302, 2452
NciI CCSGG 1 cut(s) 1646
NdeII GATC 9 cut(s) 790, 1707, 1962, 2091, 2124, 2196, 2255, 2340, 2547
NheI GCTAGC 1 cut(s) 43
NlaIII CATG 9 cut(s) 81, 1036, 1508, 1520, 1737, 2167, 2338, 2558, 2592
NlaIV GGNNCC 6 cut(s) 85, 465, 928, 1134, 1182, 1958
NmeAIII GCCGAG 1 cut(s) 247
NmuCI GTSAC 1 cut(s) 1074
NsiI ATGCAT 3 cut(s) 1057, 1739, 2457
NspI RCATGY 2 cut(s) 1737, 2558
PaqCI CACCTGC 1 cut(s) 151
PciI ACATGT 1 cut(s) 2554
PctI GAATGC 2 cut(s) 1649, 2180
PfeI GAWTC 5 cut(s) 965, 1028, 1746, 1819, 2068
PflFI GACNNNGTC 1 cut(s) 854
PflMI CCANNNNNTGG 1 cut(s) 2191
PfoI TCCNGGA 1 cut(s) 141
PkrI GCNGC 5 cut(s) 58, 757, 1252, 1902, 2445
PleI GAGTC 9 cut(s) 255, 299, 494, 877, 1081, 1167, 1649, 2155, 2320
PmaCI CACGTG 1 cut(s) 1600
PmlI CACGTG 1 cut(s) 1600
PpsI GAGTC 9 cut(s) 255, 299, 494, 877, 1081, 1167, 1649, 2155, 2320
Ppu21I YACGTR 2 cut(s) 959, 1600
PpuMI RGGWCCY 1 cut(s) 515
PscI ACATGT 1 cut(s) 2554
PshAI GACNNNNGTC 1 cut(s) 1600
PshBI ATTAAT 1 cut(s) 1560
Psp5II RGGWCCY 1 cut(s) 515
Psp6I CCWGG 2 cut(s) 141, 1839
PspCI CACGTG 1 cut(s) 1600
PspFI CCCAGC 1 cut(s) 1703
PspGI CCWGG 2 cut(s) 141, 1839
PspN4I GGNNCC 6 cut(s) 85, 465, 928, 1134, 1182, 1958
PspPI GGNCC 4 cut(s) 515, 1420, 1677, 2541
PspPPI RGGWCCY 1 cut(s) 515
PstI CTGCAG 1 cut(s) 2320
PsuI RGATCY 3 cut(s) 790, 1707, 2091
PsyI GACNNNGTC 1 cut(s) 854
RsaI GTAC 5 cut(s) 306, 984, 1197, 2420, 2571
RsaNI GTAC 5 cut(s) 305, 983, 1196, 2419, 2570
RseI CAYNNNNRTG 1 cut(s) 1122
SatI GCNGC 5 cut(s) 57, 756, 1251, 1901, 2444
Sau3AI GATC 9 cut(s) 790, 1707, 1962, 2091, 2124, 2196, 2255, 2340, 2547
Sau96I GGNCC 4 cut(s) 515, 1420, 1677, 2541
SchI GAGTC 9 cut(s) 255, 300, 494, 878, 1082, 1168, 1650, 2156, 2321
ScrFI CCNGG 3 cut(s) 143, 1646, 1841
SduI GDGCHC 2 cut(s) 88, 273
SfaNI GCATC 9 cut(s) 136, 208, 655, 1009, 1746, 2250, 2442, 2464, 2573
SfcI CTRYAG 1 cut(s) 2316
SinI GGWCC 3 cut(s) 515, 1677, 2541
SmiMI CAYNNNNRTG 1 cut(s) 1122
SsiI CCGC 5 cut(s) 149, 1675, 1845, 2444, 2490
SspI AATATT 1 cut(s) 1721
SspMI CTAG 8 cut(s) 15, 44, 386, 1145, 1154, 1424, 1691, 1766
StyD4I CCNGG 3 cut(s) 141, 1644, 1839
StyI CCWWGG 3 cut(s) 1137, 1323, 2269
TaaI ACNGT 2 cut(s) 2121, 2135
TaiI ACGT 4 cut(s) 138, 385, 961, 1602
TaqI TCGA 4 cut(s) 264, 872, 2254, 2574
TatI WGTACW 2 cut(s) 982, 2569
TauI GCSGC 1 cut(s) 2446
TfiI GAWTC 5 cut(s) 965, 1028, 1746, 1819, 2068
TscAI CASTG 4 cut(s) 660, 1281, 1582, 2470
TseFI GTSAC 1 cut(s) 1074
TseI GCWGC 4 cut(s) 56, 755, 1250, 1900
Tsp45I GTSAC 1 cut(s) 1074
TspDTI ATGAA 7 cut(s) 812, 978, 1416, 1642, 1811, 2041, 2180
TspGWI ACGGA 4 cut(s) 322, 420, 1556, 2592
TspRI CASTG 4 cut(s) 660, 1281, 1582, 2470
Tth111I GACNNNGTC 1 cut(s) 854
Van91I CCANNNNNTGG 1 cut(s) 2191
Vha464I CTTAAG 2 cut(s) 1906, 1931
VpaK11BI GGWCC 3 cut(s) 515, 1677, 2541
VspI ATTAAT 1 cut(s) 1560
XapI RAATTY 5 cut(s) 5, 239, 328, 683, 1894
XbaI TCTAGA 1 cut(s) 1690
XceI RCATGY 2 cut(s) 1737, 2558
XspI CTAG 8 cut(s) 15, 44, 386, 1145, 1154, 1424, 1691, 1766
ZraI GACGTC 1 cut(s) 136
Zsp2I ATGCAT 3 cut(s) 1057, 1739, 2457
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.