Rw2G020920

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Reverse (-)
28712739 .. 28715384
2646 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G020920.1

Sequence Viewer

Length: 2646 bp
ATGGAGTTTGCCAGCAGCATTGCAGAGAATGTCTTGGATAGGCTAGCTTCACATGCTTCCCAAGAGATCTCCTTGGCATGGAGTGCCCAACTTGAGCTCACCAAGCTCAACAACACCTTATCTACCATCAAACTAGTGCTTGAGGATGCAGAGAAGAAGCAACTGAGAAATCCCCTAATCACTCGTTGGTTGGGAAATCTCAAAGATGTTTGCCATGACGTTGATGATGTCTTGGACAAACTGGAGTTCCAAAAGTTGCGGTTGAAAGTGGAGGTCGACAACAGTGGGAAGATCAAAGGAAAGGTACGCCAATTTTTTTCCCGATGGAATCCAGTAGTGTTTAACTTCAAAATGGGACATAAAGTGAAAGAGATTAGAGAAAGACTAGCTGAAATTGATAATGAAAGGAGAGAGTTTGCTCTCTTTGAGGTTGCTAAGATAGCTGAAGATCCTCATGTGCTCCAAAGGATGCACGATAACAAAAAAGAGACCGACTCTTTGGTGGAGGCTTCAGATGTTATTGGAAGAGATGATGATAAAAAACAGATTATTAGTCATCTCTTAAATAACACTGATATCTCTGGTAAGGAGAATGTTTCTGTTATTTCCATCCTTGGGTTAGGAGGGTTGGGAAAGACAACTCTCGCTAAATTAGTATATAACGATAGCATGGTAGAGGAGAAATTTGAGATGAAAATGTGGATATGTGTCTCAGATAACTTTGATATCCAAACATTAATTCGCGGCATTATCAATGCTGCAATTAAACAAAAATGTGAGGATGAAAGCTTGGACCTTATGAAAAGAAGATTGCAAGATACTTTGCAAGGTAGAAAGTTTTTGTTAGTGTTGGATGATGTCTGGGATACGGGGCTGATTGGAATAACAATTGAAAAATGGAATGATCTAAAATGCTTGTTAAATGTGGGAGCTAATGGAAGTAAAATCATCATAACAACGCGAAATAGATCAGTTGCCTTACTTGTGAATCCCTTATACTTGCATTTTTTAGAAGGTCTTCCCCACAACGATTGCATATCATTGTTTATCAAAAGGGCATTTAAGAAAGGAGAGGAGCAACACTATCAACATTTGATAGAAATTGGAGAGAATATTGTGAAGAAGTGTGGAGGAGTTCCTTTAGCAGTTGCTACTATAGGGAGCATGCTCTATTTGAATACAGATGAACACCAATGGTCTAGTATCAGAGATGATGACATGTGGAGTATAGGGAATGACGAGATTCTACCTGCACTCAAATTGAGCTATGATGCATTGCCACAACACGTGAAACCATGTTTTGCATTTTGTTCACTTTTCCCAAAGGATTTTGAATTCAGTAGTGCAATGTTGATTCCATTGTGGATAGCACAAGGCTACCTCAAGACATCTAAGAAAAATGAAGATTTTGAACAGGTGGGTATAGACTATATAAGGCAAGTTTGCTCTAGATCTTTGTTTCAAGTTGAGGTGGATCTCAAAACAACTATATTATTTAAAATACATGATCTCGTTCATGATTTAGCAATTTCAGTGGCACAAGTAGAGTACTCCACAGTCAATTTTCGTCCCACTAGTGCTTTTGAAATGGTTCGACATGTATCAATATCTAAAAAGGACTTGCTTGGAGAAGAGGCACAAGTTCCCGATTTCATGCTCAAGTCAAAGAAATTACGAACCATTCTAGTTTCTGAAGATGGTCAGATAAGTCAACATTTTGTGAAGACATGCATCTCGAGATTCAAATATATGCGGGTGCTAGATCTCAGTGGTTCGCCTGTTGAGGAGCTACCAAGTTCCATTGGTAGTTTGTTTTATTTGAGATTTCTCAGCTTGTCTGAAAATAGGAAGATAAAAAGGCTTCCCAATTCCATCAGTAAGCTGCTGAATTTGGAGACCTTGTACCTTTCGGGTTGTGACGCACTTGAGGAGATACCCAAAGACATAGGGAACCTGATCAACCTCCGAAGCTTGGACATAACAACACAACTGACGTATTTGCCAAAAGGAATTAGACGCCTCACCAACCTTCAATTTTTATATTTTAAAGGATGTGTCAATCTTAAATCTTTGGGCGAAGAGATCCAATTCCTCAACAACCTTCGTATACTGGCGATTAGCAGTTGTAATAATTTGGAATGCTTGCCACCAAATATGAAACACATGACCGCTTTAGATACTTTGGGTGTCGATGATTGCCCGATGCTTCAGTTGATGAGATCAGGGGAAGGTCCTCAACGTCTTCGATCATTGATGATCGGGGATTCAAGTTTGGAGGCTTTGCCCCCTTGGCTCATTGAAGATTCTTCAGACACTCTACAGAGCATATGGCTTGGTGAATGTCATAATCTCACGGCACTTGCGGAGTTGCTGAACTTCAGATTCCTCGAGCAACTACACATTGAAGAATGCTCCAAATTGTCGGCTTTGCCGCAAGAGTTGCATTGCCTTACTGAGTTGAGAGAATTGGAGATCATTGGTTGTCCTGAATTGAGCAAAAGCTGCAAAAGGCAATTAAAAGGTGAGGAGTGGTCAAAGATGGCACGTCAGGTGAAGATTACACTCGACGCTGATGATGAAGAAGATGAAGCCCACAATCGCTTGGCCAACGGTAGGATCGCGTACCACACGCGACGACGCCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

881

Amino Acids

100.5

Weight (kDa)

6.06

Isoelectric Point (pI)

45.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 9 - 93 1.4e-18 Rx N-terminal domain
NB-ARC PF00931 177 - 356 5e-32 NB-ARC domain
WHD_DRP PF23559 439 - 509 7.6e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 576 - 777 8.8e-26 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1258
AccI GTMKAC 2 cut(s) 276, 2107
AccII CGCG 4 cut(s) 744, 961, 2621, 2632
AciI CCGC 6 cut(s) 259, 744, 1753, 2169, 2363, 2432
AclWI GGATC 4 cut(s) 443, 1482, 2077, 2624
AcoI YGGCCR 1 cut(s) 2604
AcsI RAATTY 3 cut(s) 683, 1334, 1888
AcuI CTGAAG 6 cut(s) 465, 495, 1713, 2192, 2292, 2362
AcvI CACGTG 1 cut(s) 1288
AcyI GRCGYC 2 cut(s) 2017, 2638
AfaI GTAC 4 cut(s) 306, 1550, 1904, 2624
AfiI CCNNNNNNNGG 4 cut(s) 78, 615, 1972, 2613
AflIII ACRYGT 3 cut(s) 1218, 1285, 1597
AhlI ACTAGT 2 cut(s) 133, 1574
AjiI CACGTC 1 cut(s) 2546
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
Alw21I GWGCWC 2 cut(s) 99, 462
Alw26I GTCTC 3 cut(s) 482, 715, 1889
AlwI GGATC 4 cut(s) 443, 1482, 2077, 2624
Ama87I CYCGRG 2 cut(s) 1735, 2387
AoxI GGCC 1 cut(s) 2604
ApeKI GCWGC 4 cut(s) 15, 758, 1882, 2502
ApoI RAATTY 3 cut(s) 683, 1334, 1888
ArsI GACNNNNNNTTYG 2 cut(s) 481, 513
AseI ATTAAT 1 cut(s) 737
Asp700I GAANNNNTTC 2 cut(s) 1017, 1590
AspS9I GGNCC 2 cut(s) 793, 2231
AsuHPI GGTGA 5 cut(s) 91, 2014, 2348, 2534, 2563
AsuNHI GCTAGC 1 cut(s) 43
AvaI CYCGRG 2 cut(s) 1735, 2387
AvaII GGWCC 2 cut(s) 793, 2231
BaeGI GKGCMC 1 cut(s) 88
BalI TGGCCA 1 cut(s) 2606
BanII GRGCYC 1 cut(s) 99
BbrPI CACGTG 1 cut(s) 1288
BbsI GAAGAC 3 cut(s) 1010, 1730, 2234
Bbv12I GWGCWC 2 cut(s) 99, 462
BbvI GCAGC 4 cut(s) 27, 745, 1869, 2489
BccI CCATC 6 cut(s) 134, 318, 617, 1691, 1880, 2533
BceAI ACGGC 2 cut(s) 2370, 2625
BciVI GTATCC 1 cut(s) 859
BclI TGATCA 1 cut(s) 1956
BcoDI GTCTC 3 cut(s) 482, 715, 1889
BcuI ACTAGT 2 cut(s) 133, 1574
BfaI CTAG 8 cut(s) 44, 134, 386, 1200, 1449, 1575, 1685, 1760
BfmI CTRYAG 2 cut(s) 1155, 2318
BfuAI ACCTGC 1 cut(s) 1258
BfuI GTATCC 1 cut(s) 859
BglI GCCNNNNNGGC 1 cut(s) 2290
BglII AGATCT 3 cut(s) 66, 1451, 1762
BisI GCNGC 6 cut(s) 16, 745, 759, 1883, 2432, 2503
BlsI GCNGC 6 cut(s) 17, 746, 760, 1884, 2433, 2504
BmcAI AGTACT 1 cut(s) 1550
Bme18I GGWCC 2 cut(s) 793, 2231
BmeT110I CYCGRG 2 cut(s) 1735, 2387
BmgBI CACGTC 1 cut(s) 2546
BmgT120I GGNCC 2 cut(s) 793, 2231
BmiI GGNNCC 1 cut(s) 1952
BmsI GCATC 5 cut(s) 136, 459, 1261, 1740, 2193
BmtI GCTAGC 1 cut(s) 47
BpiI GAAGAC 3 cut(s) 1010, 1730, 2234
BplI GAGNNNNNCTC 2 cut(s) 479, 511
BpmI CTGGAG 1 cut(s) 263
BpuEI CTTGAG 5 cut(s) 113, 161, 1367, 1643, 1946
BsaAI YACGTR 1 cut(s) 1288
BsaHI GRCGYC 2 cut(s) 2017, 2638
BsaI GGTCTC 2 cut(s) 482, 1889
BsaJI CCNNGG 3 cut(s) 72, 613, 2288
BsaXI ACNNNNNCTCC 2 cut(s) 1886, 1916
Bsc4I CCNNNNNNNGG 4 cut(s) 78, 615, 1972, 2613
Bse1I ACTGG 3 cut(s) 246, 332, 2115
Bse3DI GCAATG 4 cut(s) 18, 1274, 1353, 2443
BseDI CCNNGG 3 cut(s) 72, 613, 2288
BseGI GGATG 6 cut(s) 151, 474, 609, 787, 859, 2057
BseLI CCNNNNNNNGG 4 cut(s) 78, 615, 1972, 2613
BseMI GCAATG 4 cut(s) 18, 1274, 1353, 2443
BseMII CTCAG 5 cut(s) 155, 726, 1780, 1843, 2445
BseNI ACTGG 3 cut(s) 246, 332, 2115
BseRI GAGGAG 6 cut(s) 692, 1088, 1146, 1799, 1943, 2540
BseSI GKGCMC 1 cut(s) 88
BseXI GCAGC 4 cut(s) 27, 745, 1869, 2489
BsgI GTGCAG 1 cut(s) 1236
Bsh1236I CGCG 4 cut(s) 744, 961, 2621, 2632
BshFI GGCC 1 cut(s) 2606
BsiHKAI GWGCWC 2 cut(s) 99, 462
BsiHKCI CYCGRG 2 cut(s) 1735, 2387
BslFI GGGAC 2 cut(s) 369, 1554
BslI CCNNNNNNNGG 4 cut(s) 78, 615, 1972, 2613
BsmAI GTCTC 3 cut(s) 482, 715, 1889
BsmFI GGGAC 2 cut(s) 369, 1554
BsmI GAATGC 2 cut(s) 2144, 2414
BsnI GGCC 1 cut(s) 2606
Bso31I GGTCTC 2 cut(s) 482, 1889
BsoBI CYCGRG 2 cut(s) 1735, 2387
Bsp1286I GDGCHC 3 cut(s) 88, 99, 462
BspACI CCGC 6 cut(s) 259, 744, 1753, 2169, 2363, 2432
BspANI GGCC 1 cut(s) 2606
BspCNI CTCAG 5 cut(s) 156, 725, 1779, 1842, 2446
BspFNI CGCG 4 cut(s) 744, 961, 2621, 2632
BspHI TCATGA 1 cut(s) 1516
BspLI GGNNCC 1 cut(s) 1952
BspMI ACCTGC 1 cut(s) 1258
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 4 cut(s) 443, 1482, 2077, 2624
BspTNI GGTCTC 2 cut(s) 482, 1889
BsrDI GCAATG 4 cut(s) 18, 1274, 1353, 2443
BsrI ACTGG 3 cut(s) 246, 332, 2115
BssECI CCNNGG 3 cut(s) 72, 613, 2288
BssNAI GTATAC 1 cut(s) 2108
BssNI GRCGYC 2 cut(s) 2017, 2638
BssT1I CCWWGG 3 cut(s) 72, 613, 2288
Bst1107I GTATAC 1 cut(s) 2108
Bst4CI ACNGT 3 cut(s) 284, 1558, 2612
Bst6I CTCTTC 3 cut(s) 520, 1626, 2073
BstACI GRCGYC 2 cut(s) 2017, 2638
BstAPI GCANNNNNTGC 3 cut(s) 83, 2440, 2502
BstBAI YACGTR 1 cut(s) 1288
BstC8I GCNNGC 4 cut(s) 13, 45, 1166, 2144
BstDEI CTNAG 7 cut(s) 164, 435, 712, 1392, 1766, 1829, 2454
BstF5I GGATG 6 cut(s) 151, 474, 609, 787, 859, 2057
BstFNI CGCG 4 cut(s) 744, 961, 2621, 2632
BstMAI GTCTC 3 cut(s) 482, 715, 1889
BstMWI GCNNNNNNNGC 7 cut(s) 53, 83, 103, 440, 2290, 2440, 2502
BstNSI RCATGY 5 cut(s) 56, 1168, 1222, 1601, 1731
BstSFI CTRYAG 2 cut(s) 1155, 2318
BstSLI GKGCMC 1 cut(s) 88
BstUI CGCG 4 cut(s) 744, 961, 2621, 2632
BstV1I GCAGC 4 cut(s) 27, 745, 1869, 2489
BstV2I GAAGAC 3 cut(s) 1010, 1730, 2234
BstX2I RGATCY 6 cut(s) 66, 448, 1451, 1474, 1762, 2082
BstYI RGATCY 6 cut(s) 66, 448, 1451, 1474, 1762, 2082
BstZ17I GTATAC 1 cut(s) 2108
BsuI GTATCC 1 cut(s) 859
BsuRI GGCC 1 cut(s) 2606
BtrI CACGTC 1 cut(s) 2546
BtsCI GGATG 6 cut(s) 151, 474, 609, 787, 859, 2057
BtsIMutI CAGTG 4 cut(s) 289, 570, 1539, 1774
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 4 cut(s) 13, 45, 1166, 2144
CciI TCATGA 1 cut(s) 1516
Cfr13I GGNCC 2 cut(s) 793, 2231
CseI GACGC 3 cut(s) 1928, 2025, 2576
Csp6I GTAC 4 cut(s) 305, 1549, 1903, 2623
CspCI CAANNNNNGTGG 4 cut(s) 1013, 1048, 1515, 1550
CviQI GTAC 4 cut(s) 305, 1549, 1903, 2623
DdeI CTNAG 7 cut(s) 164, 435, 712, 1392, 1766, 1829, 2454
DraI TTTAAA 2 cut(s) 1498, 2047
EaeI YGGCCR 1 cut(s) 2604
Eam1104I CTCTTC 3 cut(s) 520, 1626, 2073
EarI CTCTTC 3 cut(s) 520, 1626, 2073
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 3 cut(s) 72, 613, 2288
Eco24I GRGCYC 1 cut(s) 99
Eco31I GGTCTC 2 cut(s) 482, 1889
Eco32I GATATC 2 cut(s) 577, 727
Eco47I GGWCC 2 cut(s) 793, 2231
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 6 cut(s) 465, 495, 1713, 2192, 2292, 2362
Eco72I CACGTG 1 cut(s) 1288
Eco88I CYCGRG 2 cut(s) 1735, 2387
EcoICRI GAGCTC 1 cut(s) 97
EcoO109I RGGNCCY 1 cut(s) 2231
EcoRI GAATTC 1 cut(s) 1334
EcoRV GATATC 2 cut(s) 577, 727
EcoT14I CCWWGG 3 cut(s) 72, 613, 2288
EcoT22I ATGCAT 2 cut(s) 1276, 1733
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 3 cut(s) 72, 613, 2288
FaqI GGGAC 2 cut(s) 369, 1554
FauI CCCGC 1 cut(s) 1746
FauNDI CATATG 1 cut(s) 2327
FbaI TGATCA 1 cut(s) 1956
FblI GTMKAC 2 cut(s) 276, 2107
Fnu4HI GCNGC 6 cut(s) 16, 745, 759, 1883, 2432, 2503
FokI GGATG 6 cut(s) 158, 481, 596, 794, 866, 2064
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 6 cut(s) 16, 745, 759, 1883, 2432, 2503
FspBI CTAG 8 cut(s) 44, 134, 386, 1200, 1449, 1575, 1685, 1760
GluI GCNGC 6 cut(s) 16, 745, 759, 1883, 2432, 2503
GsuI CTGGAG 1 cut(s) 263
HaeIII GGCC 1 cut(s) 2606
HgaI GACGC 3 cut(s) 1928, 2025, 2576
Hin1I GRCGYC 2 cut(s) 2017, 2638
HincII GTYRAC 2 cut(s) 277, 1712
HindII GTYRAC 2 cut(s) 277, 1712
HindIII AAGCTT 2 cut(s) 787, 1969
HinfI GANTC 9 cut(s) 328, 494, 988, 1243, 1354, 1740, 2264, 2303, 2382
HphI GGTGA 5 cut(s) 91, 2014, 2348, 2534, 2563
Hpy166II GTNNAC 4 cut(s) 277, 1313, 1712, 2108
Hpy188I TCNGA 9 cut(s) 514, 715, 1208, 1693, 1704, 1840, 1967, 2311, 2381
Hpy188III TCNNGA 8 cut(s) 321, 1384, 1449, 1517, 1646, 1735, 1737, 2486
Hpy8I GTNNAC 4 cut(s) 277, 1313, 1712, 2108
Hpy99I CGWCG 3 cut(s) 2570, 2637, 2640
HpyAV CCTTC 4 cut(s) 1007, 2039, 2111, 2222
HpyCH4III ACNGT 3 cut(s) 284, 1558, 2612
HpyCH4IV ACGT 5 cut(s) 219, 1287, 1994, 2239, 2545
HpyF10VI GCNNNNNNNGC 7 cut(s) 53, 83, 103, 440, 2290, 2440, 2502
HpyF3I CTNAG 7 cut(s) 164, 435, 712, 1392, 1766, 1829, 2454
HpySE526I ACGT 5 cut(s) 219, 1287, 1994, 2239, 2545
Hsp92I GRCGYC 2 cut(s) 2017, 2638
Ksp22I TGATCA 1 cut(s) 1956
LmnI GCTCC 6 cut(s) 465, 929, 1075, 1161, 1786, 2417
Lsp1109I GCAGC 4 cut(s) 27, 745, 1869, 2489
LweI GCATC 5 cut(s) 136, 459, 1261, 1740, 2193
MaeI CTAG 8 cut(s) 44, 134, 386, 1200, 1449, 1575, 1685, 1760
MaeII ACGT 5 cut(s) 219, 1287, 1994, 2239, 2545
MaeIII GTNAC 1 cut(s) 1916
MfeI CAATTG 1 cut(s) 888
MflI RGATCY 6 cut(s) 66, 448, 1451, 1474, 1762, 2082
MhlI GDGCHC 3 cut(s) 88, 99, 462
MlsI TGGCCA 1 cut(s) 2606
MluNI TGGCCA 1 cut(s) 2606
MlyI GAGTC 1 cut(s) 488
MmeI TCCRAC 1 cut(s) 831
Mox20I TGGCCA 1 cut(s) 2606
Mph1103I ATGCAT 2 cut(s) 1276, 1733
MroXI GAANNNNTTC 2 cut(s) 1017, 1590
MscI TGGCCA 1 cut(s) 2606
Msp20I TGGCCA 1 cut(s) 2606
MunI CAATTG 1 cut(s) 888
Mva1269I GAATGC 2 cut(s) 2144, 2414
MvnI CGCG 4 cut(s) 744, 961, 2621, 2632
MwoI GCNNNNNNNGC 7 cut(s) 53, 83, 103, 440, 2290, 2440, 2502
NdeI CATATG 1 cut(s) 2327
NheI GCTAGC 1 cut(s) 43
NlaIV GGNNCC 1 cut(s) 1952
NmuCI GTSAC 1 cut(s) 1916
NsiI ATGCAT 2 cut(s) 1276, 1733
NspI RCATGY 5 cut(s) 56, 1168, 1222, 1601, 1731
PaeI GCATGC 1 cut(s) 1168
PaeR7I CTCGAG 2 cut(s) 1735, 2387
PagI TCATGA 1 cut(s) 1516
PciI ACATGT 2 cut(s) 1218, 1597
PctI GAATGC 2 cut(s) 2144, 2414
PdmI GAANNNNTTC 2 cut(s) 1017, 1590
PfeI GAWTC 8 cut(s) 328, 988, 1243, 1354, 1740, 2264, 2303, 2382
PkrI GCNGC 6 cut(s) 17, 746, 760, 1884, 2433, 2504
PleI GAGTC 1 cut(s) 488
PmaCI CACGTG 1 cut(s) 1288
PmlI CACGTG 1 cut(s) 1288
PpsI GAGTC 1 cut(s) 488
Ppu21I YACGTR 1 cut(s) 1288
PpuMI RGGWCCY 1 cut(s) 2231
PscI ACATGT 2 cut(s) 1218, 1597
PshBI ATTAAT 1 cut(s) 737
Psp124BI GAGCTC 1 cut(s) 99
Psp5II RGGWCCY 1 cut(s) 2231
PspCI CACGTG 1 cut(s) 1288
PspN4I GGNNCC 1 cut(s) 1952
PspPI GGNCC 2 cut(s) 793, 2231
PspPPI RGGWCCY 1 cut(s) 2231
PspXI VCTCGAGB 1 cut(s) 2387
PsuI RGATCY 6 cut(s) 66, 448, 1451, 1474, 1762, 2082
RsaI GTAC 4 cut(s) 306, 1550, 1904, 2624
RsaNI GTAC 4 cut(s) 305, 1549, 1903, 2623
SacI GAGCTC 1 cut(s) 99
SalI GTCGAC 1 cut(s) 275
SatI GCNGC 6 cut(s) 16, 745, 759, 1883, 2432, 2503
Sau96I GGNCC 2 cut(s) 793, 2231
ScaI AGTACT 1 cut(s) 1550
SchI GAGTC 1 cut(s) 488
SduI GDGCHC 3 cut(s) 88, 99, 462
SfaNI GCATC 5 cut(s) 136, 459, 1261, 1740, 2193
SfcI CTRYAG 2 cut(s) 1155, 2318
Sfr274I CTCGAG 2 cut(s) 1735, 2387
SinI GGWCC 2 cut(s) 793, 2231
SlaI CTCGAG 2 cut(s) 1735, 2387
SmlI CTYRAG 7 cut(s) 92, 140, 1382, 1658, 1735, 1925, 2387
SmoI CTYRAG 7 cut(s) 92, 140, 1382, 1658, 1735, 1925, 2387
SpeI ACTAGT 2 cut(s) 133, 1574
SphI GCATGC 1 cut(s) 1168
SsiI CCGC 6 cut(s) 259, 744, 1753, 2169, 2363, 2432
SspI AATATT 1 cut(s) 1114
SspMI CTAG 8 cut(s) 44, 134, 386, 1200, 1449, 1575, 1685, 1760
SstI GAGCTC 1 cut(s) 99
StyI CCWWGG 3 cut(s) 72, 613, 2288
TaaI ACNGT 3 cut(s) 284, 1558, 2612
TaiI ACGT 5 cut(s) 222, 1290, 1997, 2242, 2548
TaqI TCGA 7 cut(s) 276, 1594, 1736, 2190, 2245, 2388, 2565
TaqII GACCGA 1 cut(s) 506
TatI WGTACW 1 cut(s) 1548
TauI GCSGC 2 cut(s) 747, 2434
TfiI GAWTC 8 cut(s) 328, 988, 1243, 1354, 1740, 2264, 2303, 2382
TscAI CASTG 4 cut(s) 289, 577, 1539, 1774
TseFI GTSAC 1 cut(s) 1916
TseI GCWGC 4 cut(s) 15, 758, 1882, 2502
Tsp45I GTSAC 1 cut(s) 1916
TspRI CASTG 4 cut(s) 289, 577, 1539, 1774
VpaK11BI GGWCC 2 cut(s) 793, 2231
VspI ATTAAT 1 cut(s) 737
XapI RAATTY 3 cut(s) 683, 1334, 1888
XbaI TCTAGA 1 cut(s) 1448
XceI RCATGY 5 cut(s) 56, 1168, 1222, 1601, 1731
XhoI CTCGAG 2 cut(s) 1735, 2387
XmiI GTMKAC 2 cut(s) 276, 2107
XmnI GAANNNNTTC 2 cut(s) 1017, 1590
XspI CTAG 8 cut(s) 44, 134, 386, 1200, 1449, 1575, 1685, 1760
ZrmI AGTACT 1 cut(s) 1550
Zsp2I ATGCAT 2 cut(s) 1276, 1733
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.