Rmu_sc0002983.1_g000027

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002983.1
Physical Location & Seq
Forward (+)
108397 .. 113881
5485 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002983.1_g000027.1.cds

Sequence Viewer

Length: 2946 bp
atggagtttgtctacggcatagctgagacagtcttgggtaggctagcttcacatgcttcccaagaagtctccttggcatggggtgcccaacttgagctcaccaagctcaacaagaccttatctgccatcaaactagtgctcgaggatgctgagaagaagcaagtgaggaatcccctaatcactcgttggttaggaaatctcaaagatgtttgccatgacgttgatgatgtcttggacgaactggagttccaaaagttgtggttgaaagtggagctcgataactgtgggaagatcaaaggaaaggtacgccaatctttttcccgttggaatccagtagtgtttaacttcaaaatgggacataaagtgaaagagattagaaaacgactggttgaaattgataatgaaaagagagagtttgctctccttgaggttgctaagatagttgaagatcatcatgtgccccaagggatgcactataataaaagagagactgactctttagtggaggcctcagatgttattgggagagataatgataaaaaacaaattatcagccatctcttacataacactgatatctctagtgaggagaatatttctattatttctatcctgggtttaggagggttgggaaagacaactcttgctaaattagtgtataatgatagcatggtagaggagaattttgagatgaaaatgtggatatgtgtctcagaaaactttgatatccgaacattaattcgtggcattatcaatgctgcaattaaccaaaaatgtgaggatgaaagtttggaccttatgaaaaaaagattgcaagatactttgcgaggtagaaagtttttgttagtgttggatgatgtttgggatacggagttaattggagtaacgatagaaaaatggattggtttaaaaaatctgttaaatgtgggagctaatggaagtagaatcatcataacaacacgaaatagttcagttgctttacttgtgaatcctgcatacatgcaccccttagaaggtctttcccacaaagaatgcatgtccttgttcattaaaagggtatttaagaaaggagaggagcaacgctatcaacatttgatagaaattggaaaggatattgtgaagaagtgtggaggagttcctttagcagtagctactgtagggagcatgctctatttgaaaacagagcaacaccattggttgcgtgttagagatgatgacatgtggagcataaggaatgacaatattctacctgcactcaaattgagctatgacgcattgccacaacacttgaaactgtgttttgcattttgttcactttttccaaaggattatttattccagggtcaccttttggttccactgtggatagcacaaggctacctcaagacagctgagaaaaatgaagattttgaacatatgggtatagactatataaggcagttttgctctagatctttgtttcaagtggagatggatctcaaaacaaccataagttttaaaatacatgatctagttcatgatttagcaatttcagtggcacaagtagagtactccacaatcaatttccgtccctctagtgctttggaaatggttagacatgtgtcaatatcagaaaaagacttacttggagaagaggcacaagttcctgatttcatgctcaagtcaaagaaattacgaaccattctaattcctgaagatggccagatgaatcaacattttgtgaagacatgcatctcaagattcaaatatatgcgggtgctagatctcagtggttcacctcttgaggagctaccaagttccattggtagtttgcttcatttgagatttctcaacttgtcttctaatagtaagataaaaaggcttcccaattccatcagtaagctgctgaatttggagaccttgtccttttggggttgtgaagcacttgagaagatgcccaaagacataggaaacctgatcaaccttcgaagcttggtgataactacacaacaaatgtatttgccgaaaggaattagacatctcaccttacttcaatttttatattttcatggatgtgtcaatcttaaatctttgggagaagagatcgaattcctcaacaaccttcgcaatttgtggattagcagttgtaataatttggaatccttgccaccaaatatgaaacgcatgactactttagatactttgactatcgatgattgcgaggagcttcagttgatgatgagatcaggggaaggtcctcaaggtcttcgatcattgattataatgaaatcaagtttggaggctttgcccctttggcttgaagattctagagacactctacagagcatagccgtttctgaatgtcataatctcacggcacttccggagttgataaacttcaaattcctcgagcaactacgcattgaagaatgctccaaattgtcagctttgccgcatgggttgcagtgccttactgagttgagagaattgaacattaaagggtgtactgaattgagcaaaagatgcaagaggcaattaaaaggtgagaattggttgtcaaagatgtcacgtcatgcaaagattacactcgactttgatgtggatactgatgatgaagaagacgaagatgaaggattgttctggcaacggttatttggtactcatcacctcaatttagcacttctcgcatccacttggcttctagcggtggcggcgactgcagcggcggcagcggctatgttaatcgagggtgggcaggctgtaggcttgctgcgctgggtgggctgcgcaagagcaggcgtgggacgcgggcccagggctgctgatgctggggcaatagcgcggagggagatgtacgcgcagagggggggtaggcgaggctgctggtctggcggggtagacgtggggctgctggaaccagcgctcggcctggtgtgctcgtctggccagctgtggggcttcaactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

981

Amino Acids

111.18

Weight (kDa)

6.57

Isoelectric Point (pI)

48.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2261
Acc16I TGCGCA 1 cut(s) 2767
Acc36I ACCTGC 1 cut(s) 1258
AccB1I GGYRCC 1 cut(s) 83
AccI GTMKAC 2 cut(s) 12, 2877
AccII CGCG 3 cut(s) 2787, 2821, 2837
AccIII TCCGGA 1 cut(s) 2362
AclWI GGATC 1 cut(s) 1482
AcoI YGGCCR 2 cut(s) 1699, 2923
AcsI RAATTY 4 cut(s) 682, 1888, 2087, 2381
AcuI CTGAAG 2 cut(s) 1713, 2192
AfaI GTAC 5 cut(s) 306, 1550, 2485, 2638, 2834
AfeI AGCGCT 1 cut(s) 2901
AfiI CCNNNNNNNGG 5 cut(s) 78, 1013, 1697, 2903, 2932
AflIII ACRYGT 2 cut(s) 1218, 1597
AhlI ACTAGT 1 cut(s) 133
AjiI CACGTC 2 cut(s) 2549, 2881
AjnI CCWGG 4 cut(s) 612, 1338, 2792, 2907
AjuI GAANNNNNNNTTGG 4 cut(s) 885, 917, 2258, 2290
AloI GAACNNNNNNTCC 2 cut(s) 231, 263
Alw21I GWGCWC 4 cut(s) 99, 141, 276, 2918
Alw26I GTCTC 6 cut(s) 20, 73, 482, 715, 1889, 2304
AlwI GGATC 1 cut(s) 1482
Ama87I CYCGRG 2 cut(s) 140, 2387
Aor13HI TCCGGA 1 cut(s) 2362
Aor51HI AGCGCT 1 cut(s) 2901
AoxI GGCC 5 cut(s) 507, 1699, 2789, 2905, 2923
ApaI GGGCCC 1 cut(s) 2793
ApeKI GCWGC 9 cut(s) 758, 1882, 2699, 2708, 2749, 2763, 2798, 2859, 2887
ApoI RAATTY 4 cut(s) 682, 1888, 2087, 2381
AseI ATTAAT 1 cut(s) 737
Asp700I GAANNNNTTC 1 cut(s) 967
AspLEI GCGC 5 cut(s) 2754, 2768, 2821, 2839, 2902
AspS9I GGNCC 4 cut(s) 793, 2234, 2789, 2790
AsuHPI GGTGA 7 cut(s) 91, 1337, 1767, 1987, 2014, 2534, 2636
AsuII TTCGAA 1 cut(s) 1966
AsuNHI GCTAGC 1 cut(s) 43
AvaI CYCGRG 2 cut(s) 140, 2387
AvaII GGWCC 2 cut(s) 793, 2234
BaeGI GKGCMC 3 cut(s) 88, 462, 2793
BalI TGGCCA 2 cut(s) 1701, 2925
BanI GGYRCC 1 cut(s) 83
BanII GRGCYC 3 cut(s) 99, 276, 2793
BarI GAAGNNNNNNTAC 2 cut(s) 31, 63
BbsI GAAGAC 4 cut(s) 1730, 1830, 2237, 2604
Bbv12I GWGCWC 4 cut(s) 99, 141, 276, 2918
BbvI GCAGC 9 cut(s) 745, 1869, 2711, 2720, 2736, 2750, 2785, 2846, 2874
BccI CCATC 5 cut(s) 134, 564, 1465, 1691, 1880
BceAI ACGGC 3 cut(s) 31, 2315, 2370
BciT130I CCWGG 4 cut(s) 614, 1340, 2794, 2909
BciVI GTATCC 2 cut(s) 859, 2575
BclI TGATCA 1 cut(s) 1956
BcoDI GTCTC 6 cut(s) 20, 73, 482, 715, 1889, 2304
BcuI ACTAGT 1 cut(s) 133
BfmI CTRYAG 4 cut(s) 1155, 2318, 2697, 2739
BfoI RGCGCY 1 cut(s) 2903
BfuAI ACCTGC 1 cut(s) 1258
BfuI GTATCC 2 cut(s) 859, 2575
BglI GCCNNNNNGGC 1 cut(s) 2293
BglII AGATCT 2 cut(s) 1451, 1762
BmcAI AGTACT 1 cut(s) 1550
Bme1390I CCNGG 4 cut(s) 614, 1340, 2794, 2909
Bme18I GGWCC 2 cut(s) 793, 2234
BmeT110I CYCGRG 2 cut(s) 140, 2387
BmgBI CACGTC 2 cut(s) 2549, 2881
BmgT120I GGNCC 4 cut(s) 793, 2234, 2789, 2790
BmiI GGNNCC 4 cut(s) 85, 1356, 2791, 2895
BmrFI CCNGG 4 cut(s) 614, 1340, 2794, 2909
BmsI GCATC 7 cut(s) 136, 459, 1740, 1923, 2492, 2675, 2794
BmtI GCTAGC 1 cut(s) 47
BoxI GACNNNNGTC 1 cut(s) 1600
BpiI GAAGAC 4 cut(s) 1730, 1830, 2237, 2604
BplI GAGNNNNNCTC 2 cut(s) 479, 511
BpmI CTGGAG 1 cut(s) 263
Bpu14I TTCGAA 1 cut(s) 1966
BpuEI CTTGAG 8 cut(s) 113, 446, 1367, 1643, 1720, 1802, 1946, 2223
Bsa29I ATCGAT 1 cut(s) 2190
BsaI GGTCTC 1 cut(s) 1889
BsaJI CCNNGG 6 cut(s) 72, 463, 613, 1339, 2792, 2793
BsaWI WCCGGW 1 cut(s) 2362
BsaXI ACNNNNNCTCC 4 cut(s) 1886, 1916, 2195, 2225
Bsc4I CCNNNNNNNGG 5 cut(s) 78, 1013, 1697, 2903, 2932
Bse1I ACTGG 3 cut(s) 246, 332, 390
Bse3DI GCAATG 1 cut(s) 1274
BseAI TCCGGA 1 cut(s) 2362
BseBI CCWGG 4 cut(s) 614, 1340, 2794, 2909
BseCI ATCGAT 1 cut(s) 2190
BseDI CCNNGG 6 cut(s) 72, 463, 613, 1339, 2792, 2793
BseGI GGATG 6 cut(s) 151, 474, 787, 859, 2057, 2666
BseLI CCNNNNNNNGG 5 cut(s) 78, 1013, 1697, 2903, 2932
BseMI GCAATG 1 cut(s) 1274
BseMII CTCAG 7 cut(s) 15, 141, 525, 726, 1383, 1780, 2445
BseNI ACTGG 3 cut(s) 246, 332, 390
BseRI GAGGAG 6 cut(s) 602, 692, 1088, 1146, 1799, 2216
BseSI GKGCMC 3 cut(s) 88, 462, 2793
BseXI GCAGC 9 cut(s) 745, 1869, 2711, 2720, 2736, 2750, 2785, 2846, 2874
BseYI CCCAGC 2 cut(s) 2754, 2807
BsgI GTGCAG 1 cut(s) 1236
Bsh1236I CGCG 3 cut(s) 2787, 2821, 2837
BshFI GGCC 5 cut(s) 509, 1701, 2791, 2907, 2925
BshNI GGYRCC 1 cut(s) 83
BshVI ATCGAT 1 cut(s) 2190
BsiHKAI GWGCWC 4 cut(s) 99, 141, 276, 2918
BsiHKCI CYCGRG 2 cut(s) 140, 2387
BsiSI CCGG 1 cut(s) 2363
BslFI GGGAC 3 cut(s) 369, 1554, 2796
BslI CCNNNNNNNGG 5 cut(s) 78, 1013, 1697, 2903, 2932
BsmAI GTCTC 6 cut(s) 20, 73, 482, 715, 1889, 2304
BsmFI GGGAC 3 cut(s) 369, 1554, 2796
BsmI GAATGC 2 cut(s) 1037, 2414
BsnI GGCC 5 cut(s) 509, 1701, 2791, 2907, 2925
Bso31I GGTCTC 1 cut(s) 1889
BsoBI CYCGRG 2 cut(s) 140, 2387
Bsp119I TTCGAA 1 cut(s) 1966
Bsp120I GGGCCC 1 cut(s) 2789
Bsp1286I GDGCHC 7 cut(s) 88, 99, 141, 276, 462, 2793, 2918
Bsp13I TCCGGA 1 cut(s) 2362
BspANI GGCC 5 cut(s) 509, 1701, 2791, 2907, 2925
BspCNI CTCAG 7 cut(s) 16, 142, 524, 725, 1384, 1779, 2446
BspDI ATCGAT 1 cut(s) 2190
BspEI TCCGGA 1 cut(s) 2362
BspFNI CGCG 3 cut(s) 2787, 2821, 2837
BspHI TCATGA 1 cut(s) 1516
BspLI GGNNCC 4 cut(s) 85, 1356, 2791, 2895
BspMAI CTGCAG 1 cut(s) 2701
BspMI ACCTGC 1 cut(s) 1258
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 1 cut(s) 1482
BspT104I TTCGAA 1 cut(s) 1966
BspT107I GGYRCC 1 cut(s) 83
BspTNI GGTCTC 1 cut(s) 1889
BsrDI GCAATG 1 cut(s) 1274
BsrI ACTGG 3 cut(s) 246, 332, 390
BssECI CCNNGG 6 cut(s) 72, 463, 613, 1339, 2792, 2793
BssT1I CCWWGG 2 cut(s) 72, 463
Bst2UI CCWGG 4 cut(s) 614, 1340, 2794, 2909
Bst4CI ACNGT 6 cut(s) 31, 284, 1156, 1296, 1362, 2628
Bst6I CTCTTC 2 cut(s) 1626, 2073
BstAPI GCANNNNNTGC 3 cut(s) 83, 2440, 2502
BstBI TTCGAA 1 cut(s) 1966
BstC8I GCNNGC 7 cut(s) 45, 1166, 2736, 2747, 2776, 2789, 2927
BstDEI CTNAG 9 cut(s) 24, 150, 435, 511, 712, 1009, 1392, 1766, 2454
BstEII GGTNACC 1 cut(s) 1343
BstF5I GGATG 6 cut(s) 151, 474, 787, 859, 2057, 2666
BstFNI CGCG 3 cut(s) 2787, 2821, 2837
BstH2I RGCGCY 1 cut(s) 2903
BstHHI GCGC 5 cut(s) 2754, 2768, 2821, 2839, 2902
BstMAI GTCTC 6 cut(s) 20, 73, 482, 715, 1889, 2304
BstNI CCWGG 4 cut(s) 614, 1340, 2794, 2909
BstNSI RCATGY 7 cut(s) 56, 1003, 1039, 1168, 1222, 1601, 1731
BstPAI GACNNNNGTC 1 cut(s) 1600
BstPI GGTNACC 1 cut(s) 1343
BstSCI CCNGG 4 cut(s) 612, 1338, 2792, 2907
BstSFI CTRYAG 4 cut(s) 1155, 2318, 2697, 2739
BstSLI GKGCMC 3 cut(s) 88, 462, 2793
BstUI CGCG 3 cut(s) 2787, 2821, 2837
BstV1I GCAGC 9 cut(s) 745, 1869, 2711, 2720, 2736, 2750, 2785, 2846, 2874
BstV2I GAAGAC 4 cut(s) 1730, 1830, 2237, 2604
BstX2I RGATCY 3 cut(s) 1451, 1474, 1762
BstYI RGATCY 3 cut(s) 1451, 1474, 1762
Bsu15I ATCGAT 1 cut(s) 2190
BsuI GTATCC 2 cut(s) 859, 2575
BsuRI GGCC 5 cut(s) 509, 1701, 2791, 2907, 2925
BsuTUI ATCGAT 1 cut(s) 2190
BtrI CACGTC 2 cut(s) 2549, 2881
BtsCI GGATG 6 cut(s) 151, 474, 787, 859, 2057, 2666
BtsI GCAGTG 1 cut(s) 2450
BtsIMutI CAGTG 5 cut(s) 570, 1358, 1539, 1774, 2450
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 7 cut(s) 45, 1166, 2736, 2747, 2776, 2789, 2927
CciI TCATGA 1 cut(s) 1516
CfoI GCGC 5 cut(s) 2754, 2768, 2821, 2839, 2902
Cfr13I GGNCC 4 cut(s) 793, 2234, 2789, 2790
ClaI ATCGAT 1 cut(s) 2190
CseI GACGC 2 cut(s) 1280, 2793
Csp6I GTAC 5 cut(s) 305, 1549, 2484, 2637, 2833
CspCI CAANNNNNGTGG 6 cut(s) 239, 274, 1269, 1304, 1515, 1550
CviQI GTAC 5 cut(s) 305, 1549, 2484, 2637, 2833
DdeI CTNAG 9 cut(s) 24, 150, 435, 511, 712, 1009, 1392, 1766, 2454
DraI TTTAAA 2 cut(s) 909, 1498
EaeI YGGCCR 2 cut(s) 1699, 2923
Eam1104I CTCTTC 2 cut(s) 1626, 2073
EarI CTCTTC 2 cut(s) 1626, 2073
Ecl136II GAGCTC 2 cut(s) 97, 274
Eco130I CCWWGG 2 cut(s) 72, 463
Eco147I AGGCCT 1 cut(s) 509
Eco24I GRGCYC 3 cut(s) 99, 276, 2793
Eco31I GGTCTC 1 cut(s) 1889
Eco32I GATATC 2 cut(s) 577, 727
Eco47I GGWCC 2 cut(s) 793, 2234
Eco47III AGCGCT 1 cut(s) 2901
Eco53kI GAGCTC 2 cut(s) 97, 274
Eco57I CTGAAG 2 cut(s) 1713, 2192
Eco88I CYCGRG 2 cut(s) 140, 2387
Eco91I GGTNACC 1 cut(s) 1343
EcoICRI GAGCTC 2 cut(s) 97, 274
EcoO109I RGGNCCY 1 cut(s) 2234
EcoO65I GGTNACC 1 cut(s) 1343
EcoRI GAATTC 1 cut(s) 2087
EcoRII CCWGG 4 cut(s) 612, 1338, 2792, 2907
EcoRV GATATC 2 cut(s) 577, 727
EcoT14I CCWWGG 2 cut(s) 72, 463
EcoT22I ATGCAT 2 cut(s) 1037, 1733
EcoT38I GRGCYC 3 cut(s) 99, 276, 2793
ErhI CCWWGG 2 cut(s) 72, 463
FalI AAGNNNNNCTT 2 cut(s) 1608, 1640
FaqI GGGAC 3 cut(s) 369, 1554, 2796
FauI CCCGC 3 cut(s) 1746, 2780, 2864
FauNDI CATATG 1 cut(s) 1416
FbaI TGATCA 1 cut(s) 1956
FblI GTMKAC 2 cut(s) 12, 2877
FokI GGATG 6 cut(s) 158, 481, 794, 866, 2064, 2653
FriOI GRGCYC 3 cut(s) 99, 276, 2793
FspI TGCGCA 1 cut(s) 2767
GlaI GCGC 5 cut(s) 2753, 2767, 2820, 2838, 2901
GsaI CCCAGC 2 cut(s) 2758, 2811
GsuI CTGGAG 1 cut(s) 263
HaeII RGCGCY 1 cut(s) 2903
HaeIII GGCC 5 cut(s) 509, 1701, 2791, 2907, 2925
HapII CCGG 1 cut(s) 2363
HgaI GACGC 2 cut(s) 1280, 2793
HhaI GCGC 5 cut(s) 2754, 2768, 2821, 2839, 2902
Hin6I GCGC 5 cut(s) 2752, 2766, 2819, 2837, 2900
HinP1I GCGC 5 cut(s) 2752, 2766, 2819, 2837, 2900
HindIII AAGCTT 1 cut(s) 1969
HinfI GANTC 9 cut(s) 169, 328, 494, 945, 988, 1708, 1740, 2138, 2303
HpaII CCGG 1 cut(s) 2363
HphI GGTGA 7 cut(s) 91, 1337, 1767, 1987, 2014, 2534, 2636
Hpy166II GTNNAC 5 cut(s) 13, 1313, 1775, 2484, 2878
Hpy188I TCNGA 5 cut(s) 514, 715, 731, 1612, 2338
Hpy188III TCNNGA 9 cut(s) 1384, 1449, 1517, 1646, 1691, 1737, 1781, 2307, 2363
Hpy8I GTNNAC 5 cut(s) 13, 1313, 1775, 2484, 2878
HpyAV CCTTC 5 cut(s) 1007, 1973, 2111, 2225, 2603
HpyCH4III ACNGT 6 cut(s) 31, 284, 1156, 1296, 1362, 2628
HpyCH4IV ACGT 3 cut(s) 219, 2548, 2880
HpyF3I CTNAG 9 cut(s) 24, 150, 435, 511, 712, 1009, 1392, 1766, 2454
HpySE526I ACGT 3 cut(s) 219, 2548, 2880
HspAI GCGC 5 cut(s) 2752, 2766, 2819, 2837, 2900
Kpn2I TCCGGA 1 cut(s) 2362
Ksp22I TGATCA 1 cut(s) 1956
LmnI GCTCC 8 cut(s) 271, 929, 1075, 1161, 1224, 1786, 2203, 2417
Lsp1109I GCAGC 9 cut(s) 745, 1869, 2711, 2720, 2736, 2750, 2785, 2846, 2874
LweI GCATC 7 cut(s) 136, 459, 1740, 1923, 2492, 2675, 2794
MaeII ACGT 3 cut(s) 219, 2548, 2880
MaeIII GTNAC 3 cut(s) 883, 1343, 2544
MflI RGATCY 3 cut(s) 1451, 1474, 1762
MhlI GDGCHC 7 cut(s) 88, 99, 141, 276, 462, 2793, 2918
MlsI TGGCCA 2 cut(s) 1701, 2925
MluNI TGGCCA 2 cut(s) 1701, 2925
MlyI GAGTC 1 cut(s) 488
MmeI TCCRAC 2 cut(s) 305, 831
Mox20I TGGCCA 2 cut(s) 1701, 2925
Mph1103I ATGCAT 2 cut(s) 1037, 1733
MroI TCCGGA 1 cut(s) 2362
MroXI GAANNNNTTC 1 cut(s) 967
MscI TGGCCA 2 cut(s) 1701, 2925
MslI CAYNNNNRTG 1 cut(s) 2052
Msp20I TGGCCA 2 cut(s) 1701, 2925
MspA1I CMGCKG 4 cut(s) 1391, 2702, 2711, 2929
MspI CCGG 1 cut(s) 2363
MspR9I CCNGG 4 cut(s) 614, 1340, 2794, 2909
Mva1269I GAATGC 2 cut(s) 1037, 2414
MvaI CCWGG 4 cut(s) 614, 1340, 2794, 2909
MvnI CGCG 3 cut(s) 2787, 2821, 2837
NdeI CATATG 1 cut(s) 1416
NheI GCTAGC 1 cut(s) 43
NlaIV GGNNCC 4 cut(s) 85, 1356, 2791, 2895
NmeAIII GCCGAG 1 cut(s) 2883
NmuCI GTSAC 2 cut(s) 1343, 2544
NsbI TGCGCA 1 cut(s) 2767
NsiI ATGCAT 2 cut(s) 1037, 1733
NspI RCATGY 7 cut(s) 56, 1003, 1039, 1168, 1222, 1601, 1731
NspV TTCGAA 1 cut(s) 1966
PaeI GCATGC 1 cut(s) 1168
PaeR7I CTCGAG 2 cut(s) 140, 2387
PagI TCATGA 1 cut(s) 1516
PasI CCCWGGG 1 cut(s) 2793
PceI AGGCCT 1 cut(s) 509
PciI ACATGT 2 cut(s) 1218, 1597
PcsI WCGNNNNNNNCGW 1 cut(s) 2196
PctI GAATGC 2 cut(s) 1037, 2414
PdmI GAANNNNTTC 1 cut(s) 967
PfeI GAWTC 8 cut(s) 169, 328, 945, 988, 1708, 1740, 2138, 2303
PflFI GACNNNGTC 1 cut(s) 1900
PleI GAGTC 1 cut(s) 488
PpsI GAGTC 1 cut(s) 488
PpuMI RGGWCCY 1 cut(s) 2234
PscI ACATGT 2 cut(s) 1218, 1597
PshAI GACNNNNGTC 1 cut(s) 1600
PshBI ATTAAT 1 cut(s) 737
PsiI TTATAA 1 cut(s) 2261
Psp124BI GAGCTC 2 cut(s) 99, 276
Psp5II RGGWCCY 1 cut(s) 2234
Psp6I CCWGG 4 cut(s) 612, 1338, 2792, 2907
PspEI GGTNACC 1 cut(s) 1343
PspFI CCCAGC 2 cut(s) 2754, 2807
PspGI CCWGG 4 cut(s) 612, 1338, 2792, 2907
PspN4I GGNNCC 4 cut(s) 85, 1356, 2791, 2895
PspOMI GGGCCC 1 cut(s) 2789
PspPI GGNCC 4 cut(s) 793, 2234, 2789, 2790
PspPPI RGGWCCY 1 cut(s) 2234
PspXI VCTCGAGB 2 cut(s) 140, 2387
PstI CTGCAG 1 cut(s) 2701
PsuI RGATCY 3 cut(s) 1451, 1474, 1762
PsyI GACNNNGTC 1 cut(s) 1900
PvuII CAGCTG 2 cut(s) 1391, 2929
RsaI GTAC 5 cut(s) 306, 1550, 2485, 2638, 2834
RsaNI GTAC 5 cut(s) 305, 1549, 2484, 2637, 2833
RseI CAYNNNNRTG 1 cut(s) 2052
SacI GAGCTC 2 cut(s) 99, 276
Sau96I GGNCC 4 cut(s) 793, 2234, 2789, 2790
ScaI AGTACT 1 cut(s) 1550
SchI GAGTC 1 cut(s) 488
ScrFI CCNGG 4 cut(s) 614, 1340, 2794, 2909
SduI GDGCHC 7 cut(s) 88, 99, 141, 276, 462, 2793, 2918
SfaNI GCATC 7 cut(s) 136, 459, 1740, 1923, 2492, 2675, 2794
SfcI CTRYAG 4 cut(s) 1155, 2318, 2697, 2739
Sfr274I CTCGAG 2 cut(s) 140, 2387
SfuI TTCGAA 1 cut(s) 1966
SinI GGWCC 2 cut(s) 793, 2234
SlaI CTCGAG 2 cut(s) 140, 2387
SmiMI CAYNNNNRTG 1 cut(s) 2052
SpeI ACTAGT 1 cut(s) 133
SphI GCATGC 1 cut(s) 1168
SseBI AGGCCT 1 cut(s) 509
SspI AATATT 2 cut(s) 595, 1243
SstI GAGCTC 2 cut(s) 99, 276
StuI AGGCCT 1 cut(s) 509
StyD4I CCNGG 4 cut(s) 612, 1338, 2792, 2907
StyI CCWWGG 2 cut(s) 72, 463
TaaI ACNGT 6 cut(s) 31, 284, 1156, 1296, 1362, 2628
TaiI ACGT 3 cut(s) 222, 2551, 2883
TaqI TCGA 9 cut(s) 141, 276, 1966, 2085, 2190, 2248, 2388, 2568, 2724
TatI WGTACW 2 cut(s) 1548, 2483
TauI GCSGC 5 cut(s) 2434, 2693, 2705, 2708, 2714
TfiI GAWTC 8 cut(s) 169, 328, 945, 988, 1708, 1740, 2138, 2303
TscAI CASTG 5 cut(s) 577, 1365, 1539, 1774, 2450
TseFI GTSAC 2 cut(s) 1343, 2544
TseI GCWGC 9 cut(s) 758, 1882, 2699, 2708, 2749, 2763, 2798, 2859, 2887
Tsp45I GTSAC 2 cut(s) 1343, 2544
TspGWI ACGGA 2 cut(s) 884, 1556
TspRI CASTG 5 cut(s) 577, 1365, 1539, 1774, 2450
Tth111I GACNNNGTC 1 cut(s) 1900
VpaK11BI GGWCC 2 cut(s) 793, 2234
VspI ATTAAT 1 cut(s) 737
XapI RAATTY 4 cut(s) 682, 1888, 2087, 2381
XbaI TCTAGA 2 cut(s) 1448, 2306
XceI RCATGY 7 cut(s) 56, 1003, 1039, 1168, 1222, 1601, 1731
XhoI CTCGAG 2 cut(s) 140, 2387
XmiI GTMKAC 2 cut(s) 12, 2877
XmnI GAANNNNTTC 1 cut(s) 967
ZrmI AGTACT 1 cut(s) 1550
Zsp2I ATGCAT 2 cut(s) 1037, 1733
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.