Rmu_ssc0000119.1_g000006

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000119.1
OG0000159
Physical Location & Seq
Forward (+)
17797 .. 19716
1920 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000119.1_g000006.1.cds

Sequence Viewer

Length: 1920 bp
atgtgggtatgcgtctcagaaaactttgatatccatacattagttcgtggcattattgctgcaactaaacaagaatgtgccgatgaaagtttagatcttatgaaaagggggttgcaagatattttgagagataaaaagtttttgttagtgttggacgatgtatgggataaagagtcgacgggagttacacatcaaaaatggagcgagttaaaaactgtgttacaagttggagccaaagggagtaaaatcatcgtaacaacccgtaatgaatcagtcgcttcacttgtaaaccctgtacatatgcattctttagaaggtctttctcatgaggactccatgactttgtttaaaataaatgcatttaatgaaggagagggtcaacactatcaacatttgataaaaattggagaggacattgtgaagaagtgtggaggtgttcccttagcactaacaactctagggagtctgcttcactcgaaaagggaatcacatcactggttacaagtaagagatgatgaaatatggagtatgttagaaaacaacaccatcatggctgcactaaaattgagctacagtgcactgccacctcacttgaagccttgttttgccttttgttcactttaccccaaggattatgaatttgaaagtgaagaaatagtcccattatggatggcacagggcttcctcaagtcctcaaaagaaaatgaaaatattggcgagatgggcctcgactatataaggcagttttgttccaagtctttatttcaacttgacgttgatatgaagactactgtgcggttcaaaatccatgatttagtgcacgacttggcaatattagtggcacagatacagtgctccacagttaattttcgtccctctagcgctttagaaaaggtccggcacgtgtccatatcgggaaaagacttatccggagaaaaggcaggagtcccggcattccttctccagttggaaaaactacggaccattctaaatctagatagtgatgccgggatctccaatcaatattttctaaagacatgcatcttgaaattcaagtatctgcgtgccctagatgtgcgtggttctactcttcaggagctaccaaattccattggtaacttgattcatttaaggtatctcaacctggaccgaaatacaaagataaaacagcttcccagttccatttgcaagctcttgaatttgcagttcttaagccttgacggttgtgaggcacttgaggagttacccagaggcataggaaacctgatcaacctcagactgttgactataactacacagcagatgtattttccaaaaggattatttagacgcctctccttacttcagatttttgcgatttcgaggtgtgaaaatctaaaatctctgggcgaagagatcaaacacctcactaatcttcgtcaactggggatttttaactgtggaaatgtggagtccttgccacctaacatgaagaacttgactgcattgcatactttgatgatccttggttgtaagaagcttgagttaatgaggtcgggagaaggcatccaaggtcttcgatcattattgatccaaggtagcgcagatttggaggctttgcccaattggcttcaagagtctgcagacactttacagagcatgctaatcgcggagtgtgataatctcacagcacttccagagtggttacaaaatctcaccttgctggagcaactggcgattggggactgccccaaattgtctgctttgccgcaagggatgcattgcctcactgccttgagagaattggtcattggcgggtgtcctgaattgagcaaaagatgcaaaagggaaacaggagagggttggtccaagatcaaacatgtccaaaggattgaacttgacgactctgaggatgaagctgctgatgatatcgatggttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

639

Amino Acids

71.82

Weight (kDa)

6.06

Isoelectric Point (pI)

40.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 176
AccII CGCG 1 cut(s) 1649
AccIII TCCGGA 1 cut(s) 929
AciI CCGC 4 cut(s) 796, 1649, 1748, 1794
AclWI GGATC 3 cut(s) 1019, 1495, 1564
AcsI RAATTY 4 cut(s) 638, 1049, 1105, 1198
AcuI CTGAAG 2 cut(s) 1076, 1328
AcvI CACGTG 1 cut(s) 904
AcyI GRCGYC 1 cut(s) 1330
AfaI GTAC 1 cut(s) 297
AfeI AGCGCT 1 cut(s) 883
AflII CTTAAG 1 cut(s) 1210
AflIII ACRYGT 2 cut(s) 903, 1858
AgsI TTSAA 9 cut(s) 595, 644, 767, 802, 1048, 1054, 1198, 1613, 1874
AjnI CCWGG 1 cut(s) 1143
AjuI GAANNNNNNNTTGG 2 cut(s) 1773, 1805
AluBI AGCT 6 cut(s) 570, 1099, 1171, 1192, 1519, 1898
AluI AGCT 6 cut(s) 570, 1099, 1171, 1192, 1519, 1898
Alw21I GWGCWC 3 cut(s) 580, 822, 857
Alw26I GTCTC 1 cut(s) 19
Alw44I GTGCAC 2 cut(s) 576, 818
AlwI GGATC 3 cut(s) 1019, 1495, 1564
Aor13HI TCCGGA 1 cut(s) 929
Aor51HI AGCGCT 1 cut(s) 883
AoxI GGCC 1 cut(s) 724
ApaLI GTGCAC 2 cut(s) 576, 818
ApeKI GCWGC 3 cut(s) 59, 554, 1898
ApoI RAATTY 4 cut(s) 638, 1049, 1105, 1198
AspLEI GCGC 2 cut(s) 884, 1583
AspS9I GGNCC 5 cut(s) 724, 895, 981, 1147, 1845
AsuC2I CCSGG 2 cut(s) 950, 1009
AsuHPI GGTGA 1 cut(s) 1687
AvaII GGWCC 4 cut(s) 895, 981, 1147, 1845
BaeGI GKGCMC 3 cut(s) 580, 822, 1069
BbrPI CACGTG 1 cut(s) 904
BbsI GAAGAC 2 cut(s) 791, 1547
Bbv12I GWGCWC 3 cut(s) 580, 822, 857
BbvI GCAGC 3 cut(s) 46, 541, 1885
BccI CCATC 4 cut(s) 554, 664, 715, 1907
BcgI CGANNNNNNTGC 2 cut(s) 1627, 1661
BciT130I CCWGG 1 cut(s) 1145
BclI TGATCA 1 cut(s) 1266
BcnI CCSGG 2 cut(s) 950, 1009
BcoDI GTCTC 1 cut(s) 19
BfaI CTAG 4 cut(s) 458, 879, 995, 1070
BfmI CTRYAG 2 cut(s) 571, 1620
BfoI RGCGCY 1 cut(s) 885
BfrI CTTAAG 1 cut(s) 1210
BglI GCCNNNNNGGC 1 cut(s) 1606
BglII AGATCT 1 cut(s) 94
BisI GCNGC 4 cut(s) 60, 555, 1748, 1899
BlsI GCNGC 4 cut(s) 61, 556, 1749, 1900
Bme1390I CCNGG 3 cut(s) 950, 1009, 1145
Bme18I GGWCC 4 cut(s) 895, 981, 1147, 1845
BmgT120I GGNCC 5 cut(s) 724, 895, 981, 1147, 1845
BmiI GGNNCC 1 cut(s) 232
BmrFI CCNGG 3 cut(s) 950, 1009, 1145
BmrI ACTGGG 2 cut(s) 1170, 1433
BmsI GCATC 5 cut(s) 994, 1050, 1554, 1746, 1808
BmuI ACTGGG 2 cut(s) 1170, 1433
BpiI GAAGAC 2 cut(s) 791, 1547
BpmI CTGGAG 2 cut(s) 947, 1724
Bpu10I CCTNAGC 1 cut(s) 442
BpuEI CTTGAG 4 cut(s) 671, 1256, 1541, 1795
BpuMI CCSGG 2 cut(s) 950, 1009
Bsa29I ATCGAT 1 cut(s) 1911
BsaAI YACGTR 1 cut(s) 904
BsaHI GRCGYC 1 cut(s) 1330
BsaJI CCNNGG 4 cut(s) 627, 1504, 1549, 1573
BsaWI WCCGGW 1 cut(s) 929
Bse1I ACTGG 5 cut(s) 500, 964, 1176, 1428, 1716
Bse3DI GCAATG 2 cut(s) 1484, 1759
BseAI TCCGGA 1 cut(s) 929
BseBI CCWGG 1 cut(s) 1145
BseCI ATCGAT 1 cut(s) 1911
BseDI CCNNGG 4 cut(s) 627, 1504, 1549, 1573
BseGI GGATG 4 cut(s) 675, 1545, 1761, 1897
BseMI GCAATG 2 cut(s) 1484, 1759
BseMII CTCAG 3 cut(s) 30, 1288, 1878
BseNI ACTGG 5 cut(s) 500, 964, 1176, 1428, 1716
BseRI GAGGAG 1 cut(s) 1253
BseSI GKGCMC 3 cut(s) 580, 822, 1069
BseXI GCAGC 3 cut(s) 46, 541, 1885
BsgI GTGCAG 1 cut(s) 540
Bsh1236I CGCG 1 cut(s) 1649
BshFI GGCC 1 cut(s) 726
BshVI ATCGAT 1 cut(s) 1911
BsiHKAI GWGCWC 3 cut(s) 580, 822, 857
BsiSI CCGG 4 cut(s) 898, 930, 950, 1008
BslFI GGGAC 4 cut(s) 644, 858, 932, 1736
BsmAI GTCTC 1 cut(s) 19
BsmBI CGTCTC 1 cut(s) 19
BsmFI GGGAC 4 cut(s) 644, 858, 932, 1736
BsmI GAATGC 2 cut(s) 304, 953
BsnI GGCC 1 cut(s) 726
Bsp1286I GDGCHC 4 cut(s) 580, 822, 857, 1069
Bsp13I TCCGGA 1 cut(s) 929
Bsp1407I TGTACA 1 cut(s) 295
Bsp143I GATC 8 cut(s) 94, 1011, 1266, 1395, 1500, 1559, 1569, 1851
BspACI CCGC 4 cut(s) 796, 1649, 1748, 1794
BspANI GGCC 1 cut(s) 726
BspCNI CTCAG 3 cut(s) 29, 1287, 1879
BspDI ATCGAT 1 cut(s) 1911
BspEI TCCGGA 1 cut(s) 929
BspFNI CGCG 1 cut(s) 1649
BspHI TCATGA 1 cut(s) 325
BspLI GGNNCC 1 cut(s) 232
BspMAI CTGCAG 1 cut(s) 1624
BspPI GGATC 3 cut(s) 1019, 1495, 1564
BspTI CTTAAG 1 cut(s) 1210
BsrDI GCAATG 2 cut(s) 1484, 1759
BsrGI TGTACA 1 cut(s) 295
BsrI ACTGG 5 cut(s) 500, 964, 1176, 1428, 1716
BssECI CCNNGG 4 cut(s) 627, 1504, 1549, 1573
BssMI GATC 8 cut(s) 94, 1011, 1266, 1395, 1500, 1559, 1569, 1851
BssNI GRCGYC 1 cut(s) 1330
BssT1I CCWWGG 4 cut(s) 627, 1504, 1549, 1573
Bst2UI CCWGG 1 cut(s) 1145
Bst4CI ACNGT 8 cut(s) 217, 575, 793, 852, 862, 1223, 1281, 1439
Bst6I CTCTTC 2 cut(s) 1095, 1386
BstACI GRCGYC 1 cut(s) 1330
BstAFI CTTAAG 1 cut(s) 1210
BstAPI GCANNNNNTGC 2 cut(s) 1756, 1818
BstAUI TGTACA 1 cut(s) 295
BstBAI YACGTR 1 cut(s) 904
BstC8I GCNNGC 3 cut(s) 1065, 1190, 1640
BstDEI CTNAG 4 cut(s) 16, 442, 1274, 1887
BstF5I GGATG 4 cut(s) 675, 1545, 1761, 1897
BstFNI CGCG 1 cut(s) 1649
BstH2I RGCGCY 1 cut(s) 885
BstHHI GCGC 2 cut(s) 884, 1583
BstKTI GATC 8 cut(s) 97, 1014, 1269, 1398, 1503, 1562, 1572, 1854
BstMAI GTCTC 1 cut(s) 19
BstMBI GATC 8 cut(s) 94, 1011, 1266, 1395, 1500, 1559, 1569, 1851
BstMWI GCNNNNNNNGC 4 cut(s) 723, 1606, 1756, 1818
BstNI CCWGG 1 cut(s) 1145
BstNSI RCATGY 3 cut(s) 1041, 1642, 1862
BstSCI CCNGG 3 cut(s) 948, 1007, 1143
BstSFI CTRYAG 2 cut(s) 571, 1620
BstSLI GKGCMC 3 cut(s) 580, 822, 1069
BstUI CGCG 1 cut(s) 1649
BstV1I GCAGC 3 cut(s) 46, 541, 1885
BstV2I GAAGAC 2 cut(s) 791, 1547
BstX2I RGATCY 2 cut(s) 94, 1011
BstYI RGATCY 2 cut(s) 94, 1011
Bsu15I ATCGAT 1 cut(s) 1911
BsuRI GGCC 1 cut(s) 726
BsuTUI ATCGAT 1 cut(s) 1911
BtsCI GGATG 4 cut(s) 675, 1545, 1761, 1897
BtsI GCAGTG 2 cut(s) 578, 1767
BtsIMutI CAGTG 5 cut(s) 493, 578, 580, 857, 1767
Cac8I GCNNGC 3 cut(s) 1065, 1190, 1640
CciI TCATGA 1 cut(s) 325
CfoI GCGC 2 cut(s) 884, 1583
Cfr13I GGNCC 5 cut(s) 724, 895, 981, 1147, 1845
ClaI ATCGAT 1 cut(s) 1911
CseI GACGC 1 cut(s) 1338
Csp6I GTAC 1 cut(s) 296
CspCI CAANNNNNGTGG 4 cut(s) 573, 608, 819, 854
CviAII CATG 8 cut(s) 326, 337, 550, 809, 1038, 1468, 1639, 1859
CviQI GTAC 1 cut(s) 296
DdeI CTNAG 4 cut(s) 16, 442, 1274, 1887
DpnI GATC 8 cut(s) 96, 1013, 1268, 1397, 1502, 1561, 1571, 1853
DpnII GATC 8 cut(s) 94, 1011, 1266, 1395, 1500, 1559, 1569, 1851
DraI TTTAAA 1 cut(s) 349
Eam1104I CTCTTC 2 cut(s) 1095, 1386
EarI CTCTTC 2 cut(s) 1095, 1386
Eco130I CCWWGG 4 cut(s) 627, 1504, 1549, 1573
Eco32I GATATC 2 cut(s) 31, 1909
Eco47I GGWCC 4 cut(s) 895, 981, 1147, 1845
Eco47III AGCGCT 1 cut(s) 883
Eco57I CTGAAG 2 cut(s) 1076, 1328
Eco72I CACGTG 1 cut(s) 904
EcoRII CCWGG 1 cut(s) 1143
EcoRV GATATC 2 cut(s) 31, 1909
EcoT14I CCWWGG 4 cut(s) 627, 1504, 1549, 1573
EcoT22I ATGCAT 4 cut(s) 306, 361, 1043, 1761
ErhI CCWWGG 4 cut(s) 627, 1504, 1549, 1573
Esp3I CGTCTC 1 cut(s) 19
FaeI CATG 8 cut(s) 329, 340, 553, 812, 1041, 1471, 1642, 1862
FaqI GGGAC 4 cut(s) 644, 858, 932, 1736
FatI CATG 8 cut(s) 325, 336, 549, 808, 1037, 1467, 1638, 1858
FauI CCCGC 1 cut(s) 1787
FauNDI CATATG 1 cut(s) 300
FbaI TGATCA 1 cut(s) 1266
FblI GTMKAC 1 cut(s) 176
Fnu4HI GCNGC 4 cut(s) 60, 555, 1748, 1899
FokI GGATG 4 cut(s) 682, 1532, 1768, 1904
Fsp4HI GCNGC 4 cut(s) 60, 555, 1748, 1899
FspBI CTAG 4 cut(s) 458, 879, 995, 1070
GlaI GCGC 2 cut(s) 883, 1582
GluI GCNGC 4 cut(s) 60, 555, 1748, 1899
GsuI CTGGAG 2 cut(s) 947, 1724
HaeII RGCGCY 1 cut(s) 885
HaeIII GGCC 1 cut(s) 726
HapII CCGG 4 cut(s) 898, 930, 950, 1008
HgaI GACGC 1 cut(s) 1338
HhaI GCGC 2 cut(s) 884, 1583
Hin1I GRCGYC 1 cut(s) 1330
Hin1II CATG 8 cut(s) 329, 340, 553, 812, 1041, 1471, 1642, 1862
Hin6I GCGC 2 cut(s) 882, 1581
HinP1I GCGC 2 cut(s) 882, 1581
HincII GTYRAC 4 cut(s) 177, 380, 1284, 1421
HindII GTYRAC 4 cut(s) 177, 380, 1284, 1421
HindIII AAGCTT 1 cut(s) 1517
HpaII CCGG 4 cut(s) 898, 930, 950, 1008
HphI GGTGA 1 cut(s) 1687
Hpy166II GTNNAC 8 cut(s) 177, 289, 380, 578, 617, 820, 1284, 1421
Hpy188I TCNGA 4 cut(s) 19, 1277, 1347, 1888
Hpy8I GTNNAC 8 cut(s) 177, 289, 380, 578, 617, 820, 1284, 1421
Hpy99I CGWCG 1 cut(s) 181
HpyAV CCTTC 4 cut(s) 308, 362, 968, 1535
HpyCH4III ACNGT 8 cut(s) 217, 575, 793, 852, 862, 1223, 1281, 1439
HpyCH4IV ACGT 2 cut(s) 774, 903
HpyF10VI GCNNNNNNNGC 4 cut(s) 723, 1606, 1756, 1818
HpyF3I CTNAG 4 cut(s) 16, 442, 1274, 1887
HpySE526I ACGT 2 cut(s) 774, 903
Hsp92I GRCGYC 1 cut(s) 1330
Hsp92II CATG 8 cut(s) 329, 340, 553, 812, 1041, 1471, 1642, 1862
HspAI GCGC 2 cut(s) 882, 1581
Kpn2I TCCGGA 1 cut(s) 929
Ksp22I TGATCA 1 cut(s) 1266
Kzo9I GATC 8 cut(s) 94, 1011, 1266, 1395, 1500, 1559, 1569, 1851
LmnI GCTCC 5 cut(s) 201, 230, 860, 1096, 1705
Lsp1109I GCAGC 3 cut(s) 46, 541, 1885
LweI GCATC 5 cut(s) 994, 1050, 1554, 1746, 1808
MaeI CTAG 4 cut(s) 458, 879, 995, 1070
MaeII ACGT 2 cut(s) 774, 903
MaeIII GTNAC 7 cut(s) 184, 219, 253, 498, 1115, 1242, 1683
MalI GATC 8 cut(s) 96, 1013, 1268, 1397, 1502, 1561, 1571, 1853
MboI GATC 8 cut(s) 94, 1011, 1266, 1395, 1500, 1559, 1569, 1851
MboII GAAGA 8 cut(s) 433, 662, 796, 1082, 1403, 1406, 1483, 1547
MfeI CAATTG 1 cut(s) 1603
MflI RGATCY 2 cut(s) 94, 1011
MhlI GDGCHC 4 cut(s) 580, 822, 857, 1069
MlyI GAGTC 7 cut(s) 182, 326, 472, 954, 1460, 1625, 1877
MmeI TCCRAC 3 cut(s) 132, 208, 948
Mph1103I ATGCAT 4 cut(s) 306, 361, 1043, 1761
MroI TCCGGA 1 cut(s) 929
MseI TTAA 8 cut(s) 209, 348, 363, 864, 1130, 1211, 1434, 1526
MslI CAYNNNNRTG 1 cut(s) 548
MspCI CTTAAG 1 cut(s) 1210
MspI CCGG 4 cut(s) 898, 930, 950, 1008
MspR9I CCNGG 3 cut(s) 950, 1009, 1145
MunI CAATTG 1 cut(s) 1603
Mva1269I GAATGC 2 cut(s) 304, 953
MvaI CCWGG 1 cut(s) 1145
MvnI CGCG 1 cut(s) 1649
MwoI GCNNNNNNNGC 4 cut(s) 723, 1606, 1756, 1818
NciI CCSGG 2 cut(s) 950, 1009
NdeI CATATG 1 cut(s) 300
NdeII GATC 8 cut(s) 94, 1011, 1266, 1395, 1500, 1559, 1569, 1851
NlaIII CATG 8 cut(s) 329, 340, 553, 812, 1041, 1471, 1642, 1862
NlaIV GGNNCC 1 cut(s) 232
NsiI ATGCAT 4 cut(s) 306, 361, 1043, 1761
NspI RCATGY 3 cut(s) 1041, 1642, 1862
PaeI GCATGC 1 cut(s) 1642
PagI TCATGA 1 cut(s) 325
PciI ACATGT 1 cut(s) 1858
PctI GAATGC 2 cut(s) 304, 953
PfeI GAWTC 3 cut(s) 269, 485, 1123
PkrI GCNGC 4 cut(s) 61, 556, 1749, 1900
PleI GAGTC 7 cut(s) 181, 326, 471, 953, 1459, 1624, 1877
PmaCI CACGTG 1 cut(s) 904
PmlI CACGTG 1 cut(s) 904
PpsI GAGTC 7 cut(s) 181, 326, 471, 953, 1459, 1624, 1877
Ppu21I YACGTR 1 cut(s) 904
PscI ACATGT 1 cut(s) 1858
Psp6I CCWGG 1 cut(s) 1143
PspCI CACGTG 1 cut(s) 904
PspGI CCWGG 1 cut(s) 1143
PspN4I GGNNCC 1 cut(s) 232
PspPI GGNCC 5 cut(s) 724, 895, 981, 1147, 1845
PstI CTGCAG 1 cut(s) 1624
PsuI RGATCY 2 cut(s) 94, 1011
RsaI GTAC 1 cut(s) 297
RsaNI GTAC 1 cut(s) 296
RseI CAYNNNNRTG 1 cut(s) 548
SalI GTCGAC 1 cut(s) 175
SaqAI TTAA 8 cut(s) 209, 348, 363, 864, 1130, 1211, 1434, 1526
SatI GCNGC 4 cut(s) 60, 555, 1748, 1899
Sau3AI GATC 8 cut(s) 94, 1011, 1266, 1395, 1500, 1559, 1569, 1851
Sau96I GGNCC 5 cut(s) 724, 895, 981, 1147, 1845
SchI GAGTC 7 cut(s) 182, 326, 472, 954, 1460, 1625, 1877
ScrFI CCNGG 3 cut(s) 950, 1009, 1145
SduI GDGCHC 4 cut(s) 580, 822, 857, 1069
SfaNI GCATC 5 cut(s) 994, 1050, 1554, 1746, 1808
SfcI CTRYAG 2 cut(s) 571, 1620
SinI GGWCC 4 cut(s) 895, 981, 1147, 1845
SmiMI CAYNNNNRTG 1 cut(s) 548
SmlI CTYRAG 5 cut(s) 686, 1210, 1235, 1520, 1774
SmoI CTYRAG 5 cut(s) 686, 1210, 1235, 1520, 1774
SphI GCATGC 1 cut(s) 1642
SsiI CCGC 4 cut(s) 796, 1649, 1748, 1794
SspI AATATT 3 cut(s) 712, 834, 1025
SspMI CTAG 4 cut(s) 458, 879, 995, 1070
StyD4I CCNGG 3 cut(s) 948, 1007, 1143
StyI CCWWGG 4 cut(s) 627, 1504, 1549, 1573
TaaI ACNGT 8 cut(s) 217, 575, 793, 852, 862, 1223, 1281, 1439
TaiI ACGT 2 cut(s) 777, 906
TaqI TCGA 6 cut(s) 176, 476, 729, 1361, 1558, 1911
TaqII GACCGA 1 cut(s) 1164
TatI WGTACW 1 cut(s) 295
TauI GCSGC 1 cut(s) 1750
TfiI GAWTC 3 cut(s) 269, 485, 1123
Tru1I TTAA 8 cut(s) 209, 348, 363, 864, 1130, 1211, 1434, 1526
Tru9I TTAA 8 cut(s) 209, 348, 363, 864, 1130, 1211, 1434, 1526
TscAI CASTG 5 cut(s) 500, 580, 585, 857, 1774
TseI GCWGC 3 cut(s) 59, 554, 1898
TspGWI ACGGA 1 cut(s) 994
TspRI CASTG 5 cut(s) 500, 580, 585, 857, 1774
Vha464I CTTAAG 1 cut(s) 1210
VneI GTGCAC 2 cut(s) 576, 818
VpaK11BI GGWCC 4 cut(s) 895, 981, 1147, 1845
XapI RAATTY 4 cut(s) 638, 1049, 1105, 1198
XbaI TCTAGA 1 cut(s) 994
XceI RCATGY 3 cut(s) 1041, 1642, 1862
XmiI GTMKAC 1 cut(s) 176
XspI CTAG 4 cut(s) 458, 879, 995, 1070
Zsp2I ATGCAT 4 cut(s) 306, 361, 1043, 1761
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.