FvH4_1g23030

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
Physical Location & Seq
Reverse (-)
14892210 .. 14895236
3027 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g23030.t1

Sequence Viewer

Length: 2391 bp
ATGGAGTTTGCCACCAGCATTGCAGAGAACGTCTTGGGTAGGCTAGCTTTTTATGCTTCCCAAAAGATATCCTTGGCATGGGGTGCCCAACTTGAGCTCACCAAGCTCAACAAGACTTTATCTACCATCAATCTAGTGCTTCAAGATGCAGAGAAGAAGCAAGTGAAGAATCCCTTAATCACTCATTGGTTGGGAAAGCTCAAAGATGTTTGTTACGACGTTGATGATGTCCTTGACGAACTGGAGTTTCGAAAGCTGCGGAAGAAACTGCTGGTCAACAATCATGGGATTGTCAAAGGAAAGGTACGCCAATTTTTTTCGCGTCGGAATCCAATAGTGTTCAACTTTAAAATGGGGCATAAAGTGAAAGAGATTAGAGAACGACTTGTTGAGATTGATAATGAAAAGAGAGAGTTTTCTCTTATTCAAGTCGCTCAACTGGCCGAAGATCATTGTGCGCCCAGACGAGTGCATGATGACAGAAGGATCACAACTTCCACAGTTGAGGCTTCAAGTGTTATTGGGAGAGAAGGTGACAAACAACAGATTCTCAAGCATCTGTTGAATGACACTGATTTCTCCAGTGAGGAGAATGTGTCTGTTATTTCCATTGTTGGATTAGGAGGGTTGGGGAAAACAACACTTGCTAAATTGGTGTATAATGAGAGCATGGTAAAAGAAAATTTTGAGAAGAGGATGTGGATATGCGTCTCAGACAACTTTGATATCCAAACATTAGTTAAAGGCATTACTAGTGCTGCTGGTGGACCAAAATGTGAGGATGAGAGTTTGGATATTATGGAAACAATGTTGCAAGATACTCTCAGGAGTAAAAAGTTTTTGTTGGTGTTGGATGATGTCTGGGATACAGAGTTGATTGGAGTAACACGAGAAAAATGGATTGTTTTAAAGACTCTGTTAAATGTGGGAGCTAATGGAAGTAAAATCATCGTAACAACACGAAACAATCAAGTTGCTTCAATTGTGAATTCCTCATACAAGCATCCTTTAGAAGGTCTTCCTCATGAAGACAGCATGTCCTTGTTCATCCAAAGAGCATTTAAGAAAGGAGAGGAGCACCGGTACCCACACTTGATAGAAATTGGAAAGGATATTGTGAAGAAGTGTGGAGGAGTTCCTTTAGCTGTAGCTACTCTAGGGAGCATGCTCTATTTAAATACAGAGCGGCACAAATGGGAAAGTGTTAGAGATAATGACATGTGGAGTATAGGAAATGACAATATTCTACCTGCACTCAAATTGAGCTATGATGCATTACCACAACACTTGAAACCATGTTTTGCTTTTTGTTCACTTTTCCCAAAAGATTATATATTCAACAGTGAAGATTTGGTTTCATTGTGGACAGCACAAGGCTACCTCAAATGTAAGAAAAATGAAGATTTTGAGCAAATAGGTATAAACTATGTAAGGGAGTTTTCCTTTAGATCTTTGTTTCAAATCGAGCTTGAAATGAAAACCGATATAATGTTTAAAATACATGATCTAGTTCATGATTTAGCAATTTCGGTGGCACAAGTAGAGTACTCCACAGTCAATTCTCGTCCCTCTAGTGGTTTTGATATCGTTCGACATGTGTCAGTCTCTAAAAAGGACTTGTTTGGAGAAGAGGCAAAAATGCCTGATTTCATATTCAAGTTAACCAAATTGCGAACCTGTCTAATTCCTGATATTTGCAAGATGAATCAACATTTTGTGAAGACATGCATCTTGATATTTAAATATATGCGGGTGCTAGATCTCAGAGAGTCGGCTCTTGAGGAGATACCAAGTTCTATTGAGATCCAATTCCTCACCAACCTTCGTCGATTGTGGATTTATTCCTGTGCAAATTTGGAATCCTTGCCACCAAATATGAAACTCTTGACCGCTCTGCATACTCTGATTATTGATGAGTGTGAAAAACTTGATTTGATGAAAACCACAGAAGGCCCTCAAGGTCTTAGATCATTTGTGCTCAGGAAATCAGATTTGGAGGTTTTGCCTCCTTGGCTTGAAGATTCAGCGAAAGTTCTGCAGAGCATAGAACTCGCCGACTGTGATAATCTAACTGAAATTCTGGAATTGCAAAAATTCACATTCCTTGAACAACTAAGGATTGACTACTGTTCCAATCTGTTAGCTTTGCCGGAAGGGTTGCATTGCCTTAGTGAGTTTAGAGAATTAGAGATTAATAATTGTCCGAAACTGAGCGAGAGTTGCAAAAGGCAATTAAAAGGCCAGGATTGGTCCAAGTTTGCACGTGAGGCAAAGATTAAGATCTACCCTGATATGGATACAGACGAAGATGATGATGAAGGTGCTTTCGACGATCACAATGCTATATCAACTGATAGATACTCAGATCAGTTGCAACAGAAGTGCGGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

797

Amino Acids

91.23

Weight (kDa)

5.85

Isoelectric Point (pI)

40.12

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 9 - 98 2e-20 Rx N-terminal domain
NB-ARC PF00931 178 - 356 2.8e-33 NB-ARC domain
WHD_DRP PF23559 439 - 508 9.6e-20 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1258
Acc65I GGTACC 1 cut(s) 1083
AccB1I GGYRCC 2 cut(s) 83, 1083
AccBSI CCGCTC 2 cut(s) 1186, 1892
AccII CGCG 1 cut(s) 322
AciI CCGC 5 cut(s) 259, 1186, 1750, 1890, 2385
AclWI GGATC 2 cut(s) 494, 1798
AcoI YGGCCR 1 cut(s) 441
AcsI RAATTY 5 cut(s) 682, 988, 1852, 2076, 2093
AcvI CACGTG 1 cut(s) 2264
AfaI GTAC 3 cut(s) 306, 1085, 1547
AfiI CCNNNNNNNGG 4 cut(s) 78, 1013, 1574, 2293
AflIII ACRYGT 2 cut(s) 1218, 1594
AgeI ACCGGT 1 cut(s) 1080
AhdI GACNNNNNGTC 1 cut(s) 1036
AhlI ACTAGT 1 cut(s) 752
AjnI CCWGG 1 cut(s) 2241
AjuI GAANNNNNNNTTGG 2 cut(s) 1976, 2008
Alw21I GWGCWC 3 cut(s) 99, 1080, 1980
Alw26I GTCTC 2 cut(s) 715, 1609
AlwI GGATC 2 cut(s) 494, 1798
AoxI GGCC 3 cut(s) 441, 1951, 2239
ApeKI GCWGC 2 cut(s) 256, 758
ApoI RAATTY 5 cut(s) 682, 988, 1852, 2076, 2093
AseI ATTAAT 1 cut(s) 2193
AsiGI ACCGGT 1 cut(s) 1080
Asp700I GAANNNNTTC 1 cut(s) 1017
Asp718I GGTACC 1 cut(s) 1083
AspLEI GCGC 1 cut(s) 460
AspS9I GGNCC 3 cut(s) 767, 1952, 2250
AsuHPI GGTGA 3 cut(s) 91, 545, 1807
AsuII TTCGAA 1 cut(s) 250
AsuNHI GCTAGC 1 cut(s) 43
AvaII GGWCC 2 cut(s) 767, 2250
BaeGI GKGCMC 1 cut(s) 88
BanI GGYRCC 2 cut(s) 83, 1083
BanII GRGCYC 1 cut(s) 99
BauI CACGAG 1 cut(s) 888
BbrPI CACGTG 1 cut(s) 2264
BbsI GAAGAC 3 cut(s) 1010, 1035, 1727
Bbv12I GWGCWC 3 cut(s) 99, 1080, 1980
BbvI GCAGC 2 cut(s) 243, 745
BccI CCATC 1 cut(s) 134
BcgI CGANNNNNNTGC 6 cut(s) 2017, 2032, 2051, 2066, 2321, 2355
BciT130I CCWGG 1 cut(s) 2243
BciVI GTATCC 2 cut(s) 859, 2290
BcoDI GTCTC 2 cut(s) 715, 1609
BcuI ACTAGT 1 cut(s) 752
BfaI CTAG 8 cut(s) 44, 134, 753, 1157, 1508, 1572, 1757, 2389
BfmI CTRYAG 2 cut(s) 1146, 2036
BfuAI ACCTGC 1 cut(s) 1258
BfuI GTATCC 2 cut(s) 859, 2290
BglI GCCNNNNNGGC 1 cut(s) 2011
BglII AGATCT 3 cut(s) 1448, 1759, 2280
BisI GCNGC 4 cut(s) 257, 759, 1187, 2386
BlsI GCNGC 4 cut(s) 258, 760, 1188, 2387
BmcAI AGTACT 1 cut(s) 1547
Bme1390I CCNGG 1 cut(s) 2243
Bme18I GGWCC 2 cut(s) 767, 2250
BmeRI GACNNNNNGTC 1 cut(s) 1036
BmgT120I GGNCC 3 cut(s) 767, 1952, 2250
BmiI GGNNCC 2 cut(s) 85, 1085
BmrFI CCNGG 1 cut(s) 2243
BmsI GCATC 5 cut(s) 136, 565, 1012, 1261, 1737
BmtI GCTAGC 1 cut(s) 47
BoxI GACNNNNGTC 1 cut(s) 1597
BpiI GAAGAC 3 cut(s) 1010, 1035, 1727
BpmI CTGGAG 2 cut(s) 263, 565
Bpu10I CCTNAGC 1 cut(s) 1979
Bpu14I TTCGAA 1 cut(s) 250
BpuEI CTTGAG 4 cut(s) 113, 536, 1799, 1941
BsaAI YACGTR 1 cut(s) 2264
BsaBI GATNNNNATC 1 cut(s) 2279
BsaJI CCNNGG 2 cut(s) 72, 2009
BsaWI WCCGGW 1 cut(s) 1080
BsaXI ACNNNNNCTCC 6 cut(s) 517, 547, 581, 611, 1067, 1097
Bsc4I CCNNNNNNNGG 4 cut(s) 78, 1013, 1574, 2293
Bse118I RCCGGY 1 cut(s) 1080
Bse1I ACTGG 3 cut(s) 246, 444, 582
Bse3DI GCAATG 2 cut(s) 18, 2161
Bse8I GATNNNNATC 1 cut(s) 2279
BseBI CCWGG 1 cut(s) 2243
BseDI CCNNGG 2 cut(s) 72, 2009
BseGI GGATG 5 cut(s) 702, 787, 859, 1003, 1047
BseJI GATNNNNATC 1 cut(s) 2279
BseLI CCNNNNNNNGG 4 cut(s) 78, 1013, 1574, 2293
BseMI GCAATG 2 cut(s) 18, 2161
BseMII CTCAG 6 cut(s) 726, 838, 1777, 1993, 2201, 2376
BseNI ACTGG 3 cut(s) 246, 444, 582
BseRI GAGGAG 4 cut(s) 602, 1088, 1146, 1796
BseSI GKGCMC 1 cut(s) 88
BseXI GCAGC 2 cut(s) 243, 745
BsgI GTGCAG 1 cut(s) 1236
Bsh1236I CGCG 1 cut(s) 322
BshFI GGCC 3 cut(s) 443, 1953, 2241
BshNI GGYRCC 2 cut(s) 83, 1083
BshTI ACCGGT 1 cut(s) 1080
BsiHKAI GWGCWC 3 cut(s) 99, 1080, 1980
BsiSI CCGG 2 cut(s) 1081, 2150
BslFI GGGAC 1 cut(s) 1551
BslI CCNNNNNNNGG 4 cut(s) 78, 1013, 1574, 2293
BsmAI GTCTC 2 cut(s) 715, 1609
BsmBI CGTCTC 1 cut(s) 715
BsmFI GGGAC 1 cut(s) 1551
BsnI GGCC 3 cut(s) 443, 1953, 2241
Bsp119I TTCGAA 1 cut(s) 250
Bsp1286I GDGCHC 4 cut(s) 88, 99, 1080, 1980
BspACI CCGC 5 cut(s) 259, 1186, 1750, 1890, 2385
BspANI GGCC 3 cut(s) 443, 1953, 2241
BspCNI CTCAG 6 cut(s) 725, 837, 1776, 1992, 2202, 2375
BspFNI CGCG 1 cut(s) 322
BspHI TCATGA 2 cut(s) 1024, 1513
BspLI GGNNCC 2 cut(s) 85, 1085
BspMAI CTGCAG 1 cut(s) 2040
BspMI ACCTGC 1 cut(s) 1258
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 2 cut(s) 494, 1798
BspT104I TTCGAA 1 cut(s) 250
BspT107I GGYRCC 2 cut(s) 83, 1083
BsrBI CCGCTC 2 cut(s) 1186, 1892
BsrDI GCAATG 2 cut(s) 18, 2161
BsrFI RCCGGY 1 cut(s) 1080
BsrI ACTGG 3 cut(s) 246, 444, 582
BssAI RCCGGY 1 cut(s) 1080
BssECI CCNNGG 2 cut(s) 72, 2009
BssSI CACGAG 1 cut(s) 888
BssT1I CCWWGG 2 cut(s) 72, 2009
Bst2BI CACGAG 1 cut(s) 888
Bst2UI CCWGG 1 cut(s) 2243
Bst4CI ACNGT 5 cut(s) 502, 1343, 1555, 2060, 2129
Bst6I CTCTTC 2 cut(s) 686, 1623
BstAPI GCANNNNNTGC 1 cut(s) 83
BstBAI YACGTR 1 cut(s) 2264
BstBI TTCGAA 1 cut(s) 250
BstC8I GCNNGC 2 cut(s) 45, 1166
BstDEI CTNAG 9 cut(s) 712, 824, 1763, 1964, 1979, 2114, 2168, 2210, 2362
BstENI CCTNNNNNAGG 1 cut(s) 1011
BstF5I GGATG 5 cut(s) 702, 787, 859, 1003, 1047
BstFNI CGCG 1 cut(s) 322
BstHHI GCGC 1 cut(s) 460
BstMAI GTCTC 2 cut(s) 715, 1609
BstMWI GCNNNNNNNGC 7 cut(s) 53, 83, 103, 440, 2011, 2220, 2267
BstNI CCWGG 1 cut(s) 2243
BstNSI RCATGY 5 cut(s) 1039, 1168, 1222, 1598, 1728
BstPAI GACNNNNGTC 1 cut(s) 1597
BstSCI CCNGG 1 cut(s) 2241
BstSFI CTRYAG 2 cut(s) 1146, 2036
BstSLI GKGCMC 1 cut(s) 88
BstUI CGCG 1 cut(s) 322
BstV1I GCAGC 2 cut(s) 243, 745
BstV2I GAAGAC 3 cut(s) 1010, 1035, 1727
BstX2I RGATCY 4 cut(s) 1448, 1759, 1803, 2280
BstYI RGATCY 4 cut(s) 1448, 1759, 1803, 2280
BsuI GTATCC 2 cut(s) 859, 2290
BsuRI GGCC 3 cut(s) 443, 1953, 2241
BtsCI GGATG 5 cut(s) 702, 787, 859, 1003, 1047
BtsIMutI CAGTG 3 cut(s) 570, 589, 1348
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 2 cut(s) 45, 1166
CciI TCATGA 2 cut(s) 1024, 1513
CfoI GCGC 1 cut(s) 460
Cfr10I RCCGGY 1 cut(s) 1080
Cfr13I GGNCC 3 cut(s) 767, 1952, 2250
CseI GACGC 2 cut(s) 311, 697
Csp6I GTAC 3 cut(s) 305, 1084, 1546
CspAI ACCGGT 1 cut(s) 1080
CspCI CAANNNNNGTGG 5 cut(s) 36, 1269, 1304, 1512, 1547
CviQI GTAC 3 cut(s) 305, 1084, 1546
DdeI CTNAG 9 cut(s) 712, 824, 1763, 1964, 1979, 2114, 2168, 2210, 2362
DraI TTTAAA 5 cut(s) 349, 909, 1176, 1495, 1741
DriI GACNNNNNGTC 1 cut(s) 1036
EaeI YGGCCR 1 cut(s) 441
Eam1104I CTCTTC 2 cut(s) 686, 1623
Eam1105I GACNNNNNGTC 1 cut(s) 1036
EarI CTCTTC 2 cut(s) 686, 1623
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 2 cut(s) 72, 2009
Eco24I GRGCYC 1 cut(s) 99
Eco32I GATATC 3 cut(s) 69, 727, 1585
Eco47I GGWCC 2 cut(s) 767, 2250
Eco53kI GAGCTC 1 cut(s) 97
Eco72I CACGTG 1 cut(s) 2264
EcoICRI GAGCTC 1 cut(s) 97
EcoNI CCTNNNNNAGG 1 cut(s) 1011
EcoO109I RGGNCCY 1 cut(s) 1952
EcoRI GAATTC 1 cut(s) 988
EcoRII CCWGG 1 cut(s) 2241
EcoRV GATATC 3 cut(s) 69, 727, 1585
EcoT14I CCWWGG 2 cut(s) 72, 2009
EcoT22I ATGCAT 2 cut(s) 1276, 1730
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 2 cut(s) 72, 2009
Esp3I CGTCTC 1 cut(s) 715
FalI AAGNNNNNCTT 4 cut(s) 56, 88, 158, 190
FaqI GGGAC 1 cut(s) 1551
FauI CCCGC 1 cut(s) 1743
Fnu4HI GCNGC 4 cut(s) 257, 759, 1187, 2386
FokI GGATG 5 cut(s) 709, 794, 866, 990, 1034
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 4 cut(s) 257, 759, 1187, 2386
FspBI CTAG 8 cut(s) 44, 134, 753, 1157, 1508, 1572, 1757, 2389
GlaI GCGC 1 cut(s) 459
GluI GCNGC 4 cut(s) 257, 759, 1187, 2386
GsuI CTGGAG 2 cut(s) 263, 565
HaeIII GGCC 3 cut(s) 443, 1953, 2241
HapII CCGG 2 cut(s) 1081, 2150
HgaI GACGC 2 cut(s) 311, 697
HhaI GCGC 1 cut(s) 460
Hin6I GCGC 1 cut(s) 458
HinP1I GCGC 1 cut(s) 458
HincII GTYRAC 2 cut(s) 277, 1662
HindII GTYRAC 2 cut(s) 277, 1662
HinfI GANTC 8 cut(s) 169, 328, 547, 913, 1705, 1769, 1859, 2021
HpaI GTTAAC 1 cut(s) 1662
HpaII CCGG 2 cut(s) 1081, 2150
HphI GGTGA 3 cut(s) 91, 545, 1807
Hpy166II GTNNAC 5 cut(s) 277, 767, 1313, 1365, 1662
Hpy188I TCNGA 7 cut(s) 327, 715, 1766, 1905, 1990, 2205, 2365
Hpy8I GTNNAC 5 cut(s) 277, 767, 1313, 1365, 1662
Hpy99I CGWCG 4 cut(s) 221, 327, 1830, 2333
HpyAV CCTTC 7 cut(s) 477, 524, 1007, 1832, 1943, 2147, 2312
HpyCH4III ACNGT 5 cut(s) 502, 1343, 1555, 2060, 2129
HpyCH4IV ACGT 3 cut(s) 30, 219, 2263
HpyF10VI GCNNNNNNNGC 7 cut(s) 53, 83, 103, 440, 2011, 2220, 2267
HpyF3I CTNAG 9 cut(s) 712, 824, 1763, 1964, 1979, 2114, 2168, 2210, 2362
HpySE526I ACGT 3 cut(s) 30, 219, 2263
HspAI GCGC 1 cut(s) 458
KpnI GGTACC 1 cut(s) 1087
KspAI GTTAAC 1 cut(s) 1662
LmnI GCTCC 3 cut(s) 929, 1075, 1161
Lsp1109I GCAGC 2 cut(s) 243, 745
LweI GCATC 5 cut(s) 136, 565, 1012, 1261, 1737
MaeI CTAG 8 cut(s) 44, 134, 753, 1157, 1508, 1572, 1757, 2389
MaeII ACGT 3 cut(s) 30, 219, 2263
MaeIII GTNAC 4 cut(s) 212, 533, 883, 952
MbiI CCGCTC 2 cut(s) 1186, 1892
MfeI CAATTG 1 cut(s) 981
MflI RGATCY 4 cut(s) 1448, 1759, 1803, 2280
MhlI GDGCHC 4 cut(s) 88, 99, 1080, 1980
MlyI GAGTC 2 cut(s) 907, 1778
MmeI TCCRAC 3 cut(s) 305, 595, 831
Mph1103I ATGCAT 2 cut(s) 1276, 1730
MroXI GAANNNNTTC 1 cut(s) 1017
MspI CCGG 2 cut(s) 1081, 2150
MspR9I CCNGG 1 cut(s) 2243
MunI CAATTG 1 cut(s) 981
MvaI CCWGG 1 cut(s) 2243
MvnI CGCG 1 cut(s) 322
MwoI GCNNNNNNNGC 7 cut(s) 53, 83, 103, 440, 2011, 2220, 2267
NheI GCTAGC 1 cut(s) 43
NlaIV GGNNCC 2 cut(s) 85, 1085
NmuCI GTSAC 1 cut(s) 533
NsiI ATGCAT 2 cut(s) 1276, 1730
NspI RCATGY 5 cut(s) 1039, 1168, 1222, 1598, 1728
NspV TTCGAA 1 cut(s) 250
PaeI GCATGC 1 cut(s) 1168
PagI TCATGA 2 cut(s) 1024, 1513
PciI ACATGT 2 cut(s) 1218, 1594
PdmI GAANNNNTTC 1 cut(s) 1017
PfeI GAWTC 6 cut(s) 169, 328, 547, 1705, 1859, 2021
PinAI ACCGGT 1 cut(s) 1080
PkrI GCNGC 4 cut(s) 258, 760, 1188, 2387
PleI GAGTC 2 cut(s) 907, 1777
PmaCI CACGTG 1 cut(s) 2264
PmlI CACGTG 1 cut(s) 2264
PpsI GAGTC 2 cut(s) 907, 1777
Ppu21I YACGTR 1 cut(s) 2264
PscI ACATGT 2 cut(s) 1218, 1594
PshAI GACNNNNGTC 1 cut(s) 1597
PshBI ATTAAT 1 cut(s) 2193
Psp124BI GAGCTC 1 cut(s) 99
Psp6I CCWGG 1 cut(s) 2241
PspCI CACGTG 1 cut(s) 2264
PspGI CCWGG 1 cut(s) 2241
PspN4I GGNNCC 2 cut(s) 85, 1085
PspPI GGNCC 3 cut(s) 767, 1952, 2250
PstI CTGCAG 1 cut(s) 2040
PsuI RGATCY 4 cut(s) 1448, 1759, 1803, 2280
RsaI GTAC 3 cut(s) 306, 1085, 1547
RsaNI GTAC 3 cut(s) 305, 1084, 1546
SacI GAGCTC 1 cut(s) 99
SatI GCNGC 4 cut(s) 257, 759, 1187, 2386
Sau96I GGNCC 3 cut(s) 767, 1952, 2250
ScaI AGTACT 1 cut(s) 1547
SchI GAGTC 2 cut(s) 907, 1778
ScrFI CCNGG 1 cut(s) 2243
SduI GDGCHC 4 cut(s) 88, 99, 1080, 1980
SfaNI GCATC 5 cut(s) 136, 565, 1012, 1261, 1737
SfcI CTRYAG 2 cut(s) 1146, 2036
SfuI TTCGAA 1 cut(s) 250
SinI GGWCC 2 cut(s) 767, 2250
SmiI ATTTAAAT 2 cut(s) 1176, 1741
SmlI CTYRAG 4 cut(s) 92, 551, 1778, 1956
SmoI CTYRAG 4 cut(s) 92, 551, 1778, 1956
SpeI ACTAGT 1 cut(s) 752
SphI GCATGC 1 cut(s) 1168
SsiI CCGC 5 cut(s) 259, 1186, 1750, 1890, 2385
SspI AATATT 1 cut(s) 1243
SspMI CTAG 8 cut(s) 44, 134, 753, 1157, 1508, 1572, 1757, 2389
SstI GAGCTC 1 cut(s) 99
StyD4I CCNGG 1 cut(s) 2241
StyI CCWWGG 2 cut(s) 72, 2009
SwaI ATTTAAAT 2 cut(s) 1176, 1741
TaaI ACNGT 5 cut(s) 502, 1343, 1555, 2060, 2129
TaiI ACGT 3 cut(s) 33, 222, 2266
TaqI TCGA 5 cut(s) 250, 1464, 1591, 1828, 2328
TatI WGTACW 1 cut(s) 1545
TauI GCSGC 2 cut(s) 1189, 2388
TfiI GAWTC 6 cut(s) 169, 328, 547, 1705, 1859, 2021
TscAI CASTG 3 cut(s) 577, 589, 1348
TseFI GTSAC 1 cut(s) 533
TseI GCWGC 2 cut(s) 256, 758
Tsp45I GTSAC 1 cut(s) 533
TspRI CASTG 3 cut(s) 577, 589, 1348
VpaK11BI GGWCC 2 cut(s) 767, 2250
VspI ATTAAT 1 cut(s) 2193
XagI CCTNNNNNAGG 1 cut(s) 1011
XapI RAATTY 5 cut(s) 682, 988, 1852, 2076, 2093
XceI RCATGY 5 cut(s) 1039, 1168, 1222, 1598, 1728
XmnI GAANNNNTTC 1 cut(s) 1017
XspI CTAG 8 cut(s) 44, 134, 753, 1157, 1508, 1572, 1757, 2389
ZrmI AGTACT 1 cut(s) 1547
Zsp2I ATGCAT 2 cut(s) 1276, 1730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.