Rw2G020740

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
Physical Location & Seq
Forward (+)
28349729 .. 28352422
2694 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G020740.1

Sequence Viewer

Length: 2694 bp
ATGGAGTTCGTCTACAGCATAGCCGAGACAGTCTTGGGTAGGCTAACTTCCTATGCTTCCCAAGAAGTCTACTTGGCATGGGGTGCCAACCTTGAGCTCACCAAGCTCAACAAGACCTTATCTGCCATCAAATTAGTACTCGAGGATGCAGAGAAGAAGCAAGTGAGGAATCCCCAAATCACTCGTTGGTTGGGAAATCTCAAAGATGTTTGCCATGACGTTGATGATGTCTTGGATGAACTGGAGTTCCAAAAGTTGTGGTTGAAAGTGGAGGTCGACAATTGTGGGAAGATCAAAGGAAAGGTACGCCAATTTTTTTCCCCTTGGAATCCAGTAGTGTTTAACTTCAAAATGGGACATAAAGTGAAAGAGATTAGAGAACGACTGGTTGAAATTGATAATGAAAAGAGAGAGTTTGCTCTCCTTGAGATTGCTAAGATAGTTGAAGATCATCGTGCGCCCCAAGGGATGCACAATAATAAAAGAGAGACTGACTCTTTAGTGGAGCCTTCAGATGTTATTGGGAGAGATGATGATAAAAAACAGATTGTTAGTTATCTCTTAAATAACACTGATATCTCTAGTGGGGAGAATGTTTCAGTTATTTCCATCCTTGGGTTAGGAGGGTTGGGAAAGACAACTCTCGCTAAATTAGTGTATAATGATAGCATGGTAGATGAGAAATTTGAGATGAAAATGTGGATATGCGTCTCAGACAACTTTGATATCCAAACATCAATTCGCGGAATTATTAGTGCTGCAATTAAACAAAAATGTGAGGATGAAAGTTTGGACCTTCTGAAAAGCAGATTGCAAGGTACTTTGCGAGGTAGAAGATTTTTGTTAGTGTTGGATGATGTCTGGGATACGGAGTTGATTGGAATAACAATTGAAAAATGGAATGATCTAAAAGGCTTGCTAAATGTGGGAGCTAGTGGAAGTAAAATCATCATAACAACACGAAATAGATCAGTTGCTTTACTTGTGAGTCCCTTATACATGCATTCTTTAGAAGGTCTTCTCCACAAATACTGCATGTCATTGTTTATCAAAAGGGCATTTAAGAAAGGAGAGGAGCAACGTTATCCACATTTGATAGAAATTGGAGAGGATATTGTGAAGAAGTGTGGAGGACTTCCTTTAGCGGTAGCTACTGTTGGGAGCATGCTCTATTTGAAAACAGATGAACACCAATGGTTGAGTGTCAGAGATGATGACATGTGGAGCATAAGGAATGACAATATTCTACCTGCACTCAAATTGAGCTATGATGCATTGCCACAACACTTGAAACCGTGTTTTGCATTTTGTTCACTTTTCCCAAAGGATTATGAATTCAAAAGTGCAATGTTGGTTCCACTGTGGACAGCACAAGGATACCTCAAGACATCTAAGAAAAATGAAGATTATGAACAGATGGGTGTAGACTATATAAGGGAGTTTTGCTCTAGATCTTTGTTTCAAGTGGAGGGGGATATCAAAACATTCATAATTTTTAAAATACATGATCTAGTTCATGATTTAGCAATTTCAGTGGCACAAGTAGAGTACTCCACAGTCAATTTTCGTTCCTCTAGTGCTTTGGAAATGGTTCGACATGTGTCAATATCCAAAAAAGACTTGCTTGGAGAAGAGGCACAAGTTCCTGATTTCATGCTCAAGTCTAAGAAACTGCGAACCATTTTAATTCCTAGAGCAGATTGCCAGATGATGAATCAACGTTTTGTGAAGACATGCATCTCGAGATTCAAATATATGCGGGTGCTAGATCTCAGTGGGTCGCCTCTTGAGGAGCTACCAAGTGCCATTGGTAGTTGGTTTCATTTGAGATTCCTCGACTTGTCTTATAATAGGAAGATAAAAAGGCTTCCCAATTCCATCAGTAAGCTGCTGAATTTGGAGAGCTTGTACTTTGGGCGTTGTGACGCACTTGAGGAGATACCCAAAGACATAGGGAACCTGATCAACCTCCGAAGCTTGGTGATAACAACACAACAGACGTATTTGCCAAAAGGAATCAGACGCCTCACCTCACTTCAATCTTTATATTTTGATGGATGTGTCAATCTTAAATCTTTGGGCAAAGAGATCGAATTCCTCAATAACCTTCGCAGATTGTGGATTATCAGTTGTAATAATTTGGAATGCTTGCCACCAAATATGAAAAACATGACCGCTTTAGATACTTTGAGTGTCGCTGATTGCCCGATGCTTCAGTTGATGATGAGATCAGGGGAAGGTCCTCAACGTCTTCGATCATTGCTTATCGTGAAATCAAGTTTGGAGGCGTTGCCCCCTTGGCTTGAAGATTCTGCAGGCACTCTACAGAGCATAGCACTTGGTGGATGTCATCATCTCACGGCACTTCCGGAGTTGATAAACTTCAGATTCCTCGAGCAACTACGCATTGAAGAATGCTCAAAATTGTCGGCTTTGCCGCAAGGGTTGCATTGCCTTACTGAGTTGAGAGGATTGGCGATTGAAGACTGTCCTGAATTGAGCAAAAGCTGCAAAAGGCAATTAAAAGGTGAGGAGTGGTCAAAGATGGCACGTCAGGTGAAGATTACACTCGACGACTCAGATGATGAAGAAGATGAAGCCGACAATGCCGTTAGTCACCTCAATGATGAAGGAGGAGTCCGCCTCCAATCGGTCGCGTACCTCACAACGCGCCACCAGCGACGACGCCATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

897

Amino Acids

102.38

Weight (kDa)

6.85

Isoelectric Point (pI)

47.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 9 - 90 1.1e-19 Rx N-terminal domain
NB-ARC PF00931 181 - 356 2.4e-29 NB-ARC domain
WHD_DRP PF23559 439 - 509 4.4e-20 Disease resistance protein Winged helix domain
LRR_14 PF23598 559 - 771 4.2e-25 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1848
Acc36I ACCTGC 1 cut(s) 1258
AccB1I GGYRCC 1 cut(s) 83
AccI GTMKAC 4 cut(s) 12, 69, 276, 1425
AccII CGCG 3 cut(s) 744, 2657, 2671
AccIII TCCGGA 1 cut(s) 2368
AciI CCGC 6 cut(s) 744, 1145, 1759, 2175, 2438, 2641
AclI AACGTT 2 cut(s) 1081, 1720
AcsI RAATTY 4 cut(s) 683, 1334, 1894, 2093
AcuI CTGAAG 3 cut(s) 495, 2198, 2368
AcyI GRCGYC 2 cut(s) 2023, 2686
AdeI CACNNNGTG 1 cut(s) 2342
AfaI GTAC 6 cut(s) 138, 306, 820, 1550, 1910, 2660
AfiI CCNNNNNNNGG 3 cut(s) 615, 1978, 2650
AflIII ACRYGT 2 cut(s) 1218, 1597
AjiI CACGTC 1 cut(s) 2552
AjuI GAANNNNNNNTTGG 4 cut(s) 723, 755, 2264, 2296
AloI GAACNNNNNNTCC 2 cut(s) 231, 263
Alw21I GWGCWC 1 cut(s) 99
Alw26I GTCTC 3 cut(s) 20, 482, 715
Ama87I CYCGRG 3 cut(s) 140, 1741, 2393
Aor13HI TCCGGA 1 cut(s) 2368
ApeKI GCWGC 3 cut(s) 758, 1888, 2508
ApoI RAATTY 4 cut(s) 683, 1334, 1894, 2093
Asp700I GAANNNNTTC 2 cut(s) 1017, 1590
AspLEI GCGC 2 cut(s) 460, 2673
AspS9I GGNCC 2 cut(s) 793, 2240
AsuHPI GGTGA 6 cut(s) 91, 1993, 2020, 2540, 2569, 2609
AvaI CYCGRG 3 cut(s) 140, 1741, 2393
AvaII GGWCC 2 cut(s) 793, 2240
BanI GGYRCC 1 cut(s) 83
BanII GRGCYC 1 cut(s) 99
BarI GAAGNNNNNNTAC 2 cut(s) 31, 63
BbsI GAAGAC 4 cut(s) 1010, 1736, 2243, 2490
Bbv12I GWGCWC 1 cut(s) 99
BbvI GCAGC 3 cut(s) 745, 1875, 2495
BccI CCATC 6 cut(s) 134, 617, 1411, 1886, 2048, 2539
BceAI ACGGC 2 cut(s) 2376, 2594
BcgI CGANNNNNNTGC 2 cut(s) 2071, 2105
BciVI GTATCC 2 cut(s) 859, 1370
BclI TGATCA 1 cut(s) 1962
BcoDI GTCTC 3 cut(s) 20, 482, 715
BfaI CTAG 7 cut(s) 582, 933, 1449, 1511, 1575, 1692, 1766
BfmI CTRYAG 3 cut(s) 13, 2313, 2324
BfuAI ACCTGC 1 cut(s) 1258
BfuI GTATCC 2 cut(s) 859, 1370
BglI GCCNNNNNGGC 1 cut(s) 2299
BglII AGATCT 2 cut(s) 1451, 1768
BisI GCNGC 4 cut(s) 759, 1889, 2438, 2509
BlsI GCNGC 4 cut(s) 760, 1890, 2439, 2510
BmcAI AGTACT 2 cut(s) 138, 1550
Bme18I GGWCC 2 cut(s) 793, 2240
BmeT110I CYCGRG 3 cut(s) 140, 1741, 2393
BmgBI CACGTC 1 cut(s) 2552
BmgT120I GGNCC 2 cut(s) 793, 2240
BmiI GGNNCC 4 cut(s) 85, 507, 1356, 1958
BmsI GCATC 5 cut(s) 136, 459, 1261, 1746, 2199
BoxI GACNNNNGTC 1 cut(s) 1600
BpiI GAAGAC 4 cut(s) 1010, 1736, 2243, 2490
BplI GAGNNNNNCTC 6 cut(s) 479, 511, 1430, 1462, 2628, 2660
BpmI CTGGAG 1 cut(s) 263
BpuEI CTTGAG 6 cut(s) 113, 446, 1367, 1643, 1808, 1952
BsaHI GRCGYC 2 cut(s) 2023, 2686
BsaJI CCNNGG 4 cut(s) 323, 463, 613, 2297
BsaWI WCCGGW 1 cut(s) 2368
BsaXI ACNNNNNCTCC 2 cut(s) 1892, 1922
Bsc4I CCNNNNNNNGG 3 cut(s) 615, 1978, 2650
Bse1I ACTGG 3 cut(s) 246, 332, 390
Bse3DI GCAATG 4 cut(s) 1274, 1353, 2258, 2449
BseAI TCCGGA 1 cut(s) 2368
BseDI CCNNGG 4 cut(s) 323, 463, 613, 2297
BseGI GGATG 8 cut(s) 151, 241, 474, 609, 787, 859, 2063, 2351
BseLI CCNNNNNNNGG 3 cut(s) 615, 1978, 2650
BseMI GCAATG 4 cut(s) 1274, 1353, 2258, 2449
BseMII CTCAG 4 cut(s) 726, 1786, 2451, 2592
BseNI ACTGG 3 cut(s) 246, 332, 390
BseRI GAGGAG 5 cut(s) 1088, 1805, 1949, 2546, 2649
BseXI GCAGC 3 cut(s) 745, 1875, 2495
BsgI GTGCAG 1 cut(s) 1236
Bsh1236I CGCG 3 cut(s) 744, 2657, 2671
Bsh1285I CGRYCG 1 cut(s) 2655
BshNI GGYRCC 1 cut(s) 83
BsiEI CGRYCG 1 cut(s) 2655
BsiHKAI GWGCWC 1 cut(s) 99
BsiHKCI CYCGRG 3 cut(s) 140, 1741, 2393
BsiSI CCGG 1 cut(s) 2369
BslFI GGGAC 2 cut(s) 369, 975
BslI CCNNNNNNNGG 3 cut(s) 615, 1978, 2650
BsmAI GTCTC 3 cut(s) 20, 482, 715
BsmBI CGTCTC 1 cut(s) 715
BsmFI GGGAC 2 cut(s) 369, 975
BsmI GAATGC 3 cut(s) 1003, 2150, 2420
BsoBI CYCGRG 3 cut(s) 140, 1741, 2393
Bsp1286I GDGCHC 1 cut(s) 99
Bsp13I TCCGGA 1 cut(s) 2368
BspACI CCGC 6 cut(s) 744, 1145, 1759, 2175, 2438, 2641
BspCNI CTCAG 4 cut(s) 725, 1785, 2452, 2591
BspEI TCCGGA 1 cut(s) 2368
BspFNI CGCG 3 cut(s) 744, 2657, 2671
BspHI TCATGA 1 cut(s) 1516
BspLI GGNNCC 4 cut(s) 85, 507, 1356, 1958
BspMAI CTGCAG 1 cut(s) 2317
BspMI ACCTGC 1 cut(s) 1258
BspT107I GGYRCC 1 cut(s) 83
BsrDI GCAATG 4 cut(s) 1274, 1353, 2258, 2449
BsrI ACTGG 3 cut(s) 246, 332, 390
BssECI CCNNGG 4 cut(s) 323, 463, 613, 2297
BssNI GRCGYC 2 cut(s) 2023, 2686
BssT1I CCWWGG 4 cut(s) 323, 463, 613, 2297
Bst4CI ACNGT 6 cut(s) 31, 1156, 1296, 1362, 1558, 2489
Bst6I CTCTTC 1 cut(s) 1626
BstACI GRCGYC 2 cut(s) 2023, 2686
BstAPI GCANNNNNTGC 3 cut(s) 83, 2446, 2508
BstC8I GCNNGC 4 cut(s) 917, 1166, 2150, 2317
BstDEI CTNAG 7 cut(s) 435, 712, 1392, 1665, 1772, 2460, 2578
BstF5I GGATG 8 cut(s) 151, 241, 474, 609, 787, 859, 2063, 2351
BstFNI CGCG 3 cut(s) 744, 2657, 2671
BstHHI GCGC 2 cut(s) 460, 2673
BstMAI GTCTC 3 cut(s) 20, 482, 715
BstMCI CGRYCG 1 cut(s) 2655
BstMWI GCNNNNNNNGC 7 cut(s) 83, 103, 2299, 2446, 2508, 2606, 2677
BstNSI RCATGY 6 cut(s) 1003, 1039, 1168, 1222, 1601, 1737
BstPAI GACNNNNGTC 1 cut(s) 1600
BstSFI CTRYAG 3 cut(s) 13, 2313, 2324
BstUI CGCG 3 cut(s) 744, 2657, 2671
BstV1I GCAGC 3 cut(s) 745, 1875, 2495
BstV2I GAAGAC 4 cut(s) 1010, 1736, 2243, 2490
BstX2I RGATCY 2 cut(s) 1451, 1768
BstYI RGATCY 2 cut(s) 1451, 1768
BsuI GTATCC 2 cut(s) 859, 1370
BtrI CACGTC 1 cut(s) 2552
BtsCI GGATG 8 cut(s) 151, 241, 474, 609, 787, 859, 2063, 2351
BtsIMutI CAGTG 4 cut(s) 570, 1358, 1539, 1780
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 4 cut(s) 917, 1166, 2150, 2317
CciI TCATGA 1 cut(s) 1516
CfoI GCGC 2 cut(s) 460, 2673
Cfr13I GGNCC 2 cut(s) 793, 2240
CseI GACGC 3 cut(s) 697, 1934, 2031
Csp6I GTAC 6 cut(s) 137, 305, 819, 1549, 1909, 2659
CspCI CAANNNNNGTGG 6 cut(s) 239, 274, 1269, 1304, 1515, 1550
CviQI GTAC 6 cut(s) 137, 305, 819, 1549, 1909, 2659
DdeI CTNAG 7 cut(s) 435, 712, 1392, 1665, 1772, 2460, 2578
DraI TTTAAA 1 cut(s) 1498
DraIII CACNNNGTG 1 cut(s) 2342
Eam1104I CTCTTC 1 cut(s) 1626
EarI CTCTTC 1 cut(s) 1626
EciI GGCGGA 1 cut(s) 2630
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 4 cut(s) 323, 463, 613, 2297
Eco24I GRGCYC 1 cut(s) 99
Eco32I GATATC 3 cut(s) 577, 727, 1477
Eco47I GGWCC 2 cut(s) 793, 2240
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 3 cut(s) 495, 2198, 2368
Eco88I CYCGRG 3 cut(s) 140, 1741, 2393
EcoICRI GAGCTC 1 cut(s) 97
EcoO109I RGGNCCY 1 cut(s) 2240
EcoRI GAATTC 2 cut(s) 1334, 2093
EcoRV GATATC 3 cut(s) 577, 727, 1477
EcoT14I CCWWGG 4 cut(s) 323, 463, 613, 2297
EcoT22I ATGCAT 3 cut(s) 1005, 1276, 1739
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 4 cut(s) 323, 463, 613, 2297
Esp3I CGTCTC 1 cut(s) 715
FalI AAGNNNNNCTT 2 cut(s) 1608, 1640
FaqI GGGAC 2 cut(s) 369, 975
FauI CCCGC 1 cut(s) 1752
FbaI TGATCA 1 cut(s) 1962
FblI GTMKAC 4 cut(s) 12, 69, 276, 1425
Fnu4HI GCNGC 4 cut(s) 759, 1889, 2438, 2509
FokI GGATG 8 cut(s) 158, 248, 481, 596, 794, 866, 2070, 2358
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 4 cut(s) 759, 1889, 2438, 2509
FspBI CTAG 7 cut(s) 582, 933, 1449, 1511, 1575, 1692, 1766
GlaI GCGC 2 cut(s) 459, 2672
GluI GCNGC 4 cut(s) 759, 1889, 2438, 2509
GsuI CTGGAG 1 cut(s) 263
HapII CCGG 1 cut(s) 2369
HgaI GACGC 3 cut(s) 697, 1934, 2031
HhaI GCGC 2 cut(s) 460, 2673
Hin1I GRCGYC 2 cut(s) 2023, 2686
Hin6I GCGC 2 cut(s) 458, 2671
HinP1I GCGC 2 cut(s) 458, 2671
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HindIII AAGCTT 1 cut(s) 1975
HpaII CCGG 1 cut(s) 2369
HphI GGTGA 6 cut(s) 91, 1993, 2020, 2540, 2569, 2609
Hpy166II GTNNAC 6 cut(s) 13, 70, 277, 1313, 1365, 1426
Hpy188I TCNGA 8 cut(s) 514, 715, 801, 1208, 1973, 2021, 2387, 2581
Hpy8I GTNNAC 6 cut(s) 13, 70, 277, 1313, 1365, 1426
Hpy99I CGWCG 3 cut(s) 2576, 2685, 2688
HpyAV CCTTC 6 cut(s) 519, 806, 1007, 2117, 2231, 2624
HpyCH4III ACNGT 6 cut(s) 31, 1156, 1296, 1362, 1558, 2489
HpyCH4IV ACGT 6 cut(s) 219, 1081, 1720, 2000, 2248, 2551
HpyF10VI GCNNNNNNNGC 7 cut(s) 83, 103, 2299, 2446, 2508, 2606, 2677
HpyF3I CTNAG 7 cut(s) 435, 712, 1392, 1665, 1772, 2460, 2578
HpySE526I ACGT 6 cut(s) 219, 1081, 1720, 2000, 2248, 2551
Hsp92I GRCGYC 2 cut(s) 2023, 2686
HspAI GCGC 2 cut(s) 458, 2671
Kpn2I TCCGGA 1 cut(s) 2368
Ksp22I TGATCA 1 cut(s) 1962
LmnI GCTCC 6 cut(s) 505, 929, 1075, 1161, 1224, 1792
Lsp1109I GCAGC 3 cut(s) 745, 1875, 2495
LweI GCATC 5 cut(s) 136, 459, 1261, 1746, 2199
MaeI CTAG 7 cut(s) 582, 933, 1449, 1511, 1575, 1692, 1766
MaeII ACGT 6 cut(s) 219, 1081, 1720, 2000, 2248, 2551
MaeIII GTNAC 2 cut(s) 1922, 2615
MfeI CAATTG 2 cut(s) 280, 888
MflI RGATCY 2 cut(s) 1451, 1768
MhlI GDGCHC 1 cut(s) 99
MlyI GAGTC 4 cut(s) 488, 997, 2570, 2646
MmeI TCCRAC 1 cut(s) 831
Mph1103I ATGCAT 3 cut(s) 1005, 1276, 1739
MroI TCCGGA 1 cut(s) 2368
MroXI GAANNNNTTC 2 cut(s) 1017, 1590
MseI TTAA 8 cut(s) 342, 563, 765, 1062, 1497, 1685, 2070, 2522
MslI CAYNNNNRTG 1 cut(s) 2622
MspI CCGG 1 cut(s) 2369
MunI CAATTG 2 cut(s) 280, 888
Mva1269I GAATGC 3 cut(s) 1003, 2150, 2420
MvnI CGCG 3 cut(s) 744, 2657, 2671
MwoI GCNNNNNNNGC 7 cut(s) 83, 103, 2299, 2446, 2508, 2606, 2677
NlaIV GGNNCC 4 cut(s) 85, 507, 1356, 1958
NmeAIII GCCGAG 1 cut(s) 49
NmuCI GTSAC 2 cut(s) 1922, 2615
NsiI ATGCAT 3 cut(s) 1005, 1276, 1739
NspI RCATGY 6 cut(s) 1003, 1039, 1168, 1222, 1601, 1737
PaeI GCATGC 1 cut(s) 1168
PaeR7I CTCGAG 3 cut(s) 140, 1741, 2393
PagI TCATGA 1 cut(s) 1516
PciI ACATGT 2 cut(s) 1218, 1597
PctI GAATGC 3 cut(s) 1003, 2150, 2420
PdmI GAANNNNTTC 2 cut(s) 1017, 1590
PfeI GAWTC 8 cut(s) 169, 328, 1714, 1746, 1830, 2016, 2309, 2388
PkrI GCNGC 4 cut(s) 760, 1890, 2439, 2510
PleI GAGTC 4 cut(s) 488, 996, 2570, 2645
PpsI GAGTC 4 cut(s) 488, 996, 2570, 2645
PpuMI RGGWCCY 1 cut(s) 2240
PscI ACATGT 2 cut(s) 1218, 1597
PshAI GACNNNNGTC 1 cut(s) 1600
PsiI TTATAA 1 cut(s) 1848
Psp124BI GAGCTC 1 cut(s) 99
Psp1406I AACGTT 2 cut(s) 1081, 1720
Psp5II RGGWCCY 1 cut(s) 2240
PspN4I GGNNCC 4 cut(s) 85, 507, 1356, 1958
PspPI GGNCC 2 cut(s) 793, 2240
PspPPI RGGWCCY 1 cut(s) 2240
PspXI VCTCGAGB 2 cut(s) 140, 2393
PstI CTGCAG 1 cut(s) 2317
PsuI RGATCY 2 cut(s) 1451, 1768
RsaI GTAC 6 cut(s) 138, 306, 820, 1550, 1910, 2660
RsaNI GTAC 6 cut(s) 137, 305, 819, 1549, 1909, 2659
RseI CAYNNNNRTG 1 cut(s) 2622
SacI GAGCTC 1 cut(s) 99
SalI GTCGAC 1 cut(s) 275
SaqAI TTAA 8 cut(s) 342, 563, 765, 1062, 1497, 1685, 2070, 2522
SatI GCNGC 4 cut(s) 759, 1889, 2438, 2509
Sau96I GGNCC 2 cut(s) 793, 2240
ScaI AGTACT 2 cut(s) 138, 1550
SchI GAGTC 4 cut(s) 488, 997, 2570, 2646
SduI GDGCHC 1 cut(s) 99
SfaNI GCATC 5 cut(s) 136, 459, 1261, 1746, 2199
SfcI CTRYAG 3 cut(s) 13, 2313, 2324
Sfr274I CTCGAG 3 cut(s) 140, 1741, 2393
SinI GGWCC 2 cut(s) 793, 2240
SlaI CTCGAG 3 cut(s) 140, 1741, 2393
SmiMI CAYNNNNRTG 1 cut(s) 2622
SmlI CTYRAG 9 cut(s) 92, 140, 425, 1382, 1658, 1741, 1787, 1931, 2393
SmoI CTYRAG 9 cut(s) 92, 140, 425, 1382, 1658, 1741, 1787, 1931, 2393
SphI GCATGC 1 cut(s) 1168
SsiI CCGC 6 cut(s) 744, 1145, 1759, 2175, 2438, 2641
SspI AATATT 1 cut(s) 1243
SspMI CTAG 7 cut(s) 582, 933, 1449, 1511, 1575, 1692, 1766
SstI GAGCTC 1 cut(s) 99
StyI CCWWGG 4 cut(s) 323, 463, 613, 2297
TaaI ACNGT 6 cut(s) 31, 1156, 1296, 1362, 1558, 2489
TaiI ACGT 6 cut(s) 222, 1084, 1723, 2003, 2251, 2554
TaqI TCGA 9 cut(s) 141, 276, 1594, 1742, 1836, 2091, 2254, 2394, 2571
TaqII GACCGA 1 cut(s) 2641
TatI WGTACW 3 cut(s) 136, 1548, 1908
TauI GCSGC 1 cut(s) 2440
TfiI GAWTC 8 cut(s) 169, 328, 1714, 1746, 1830, 2016, 2309, 2388
Tru1I TTAA 8 cut(s) 342, 563, 765, 1062, 1497, 1685, 2070, 2522
Tru9I TTAA 8 cut(s) 342, 563, 765, 1062, 1497, 1685, 2070, 2522
TscAI CASTG 4 cut(s) 577, 1365, 1539, 1780
TseFI GTSAC 2 cut(s) 1922, 2615
TseI GCWGC 3 cut(s) 758, 1888, 2508
Tsp45I GTSAC 2 cut(s) 1922, 2615
TspGWI ACGGA 1 cut(s) 884
TspRI CASTG 4 cut(s) 577, 1365, 1539, 1780
VpaK11BI GGWCC 2 cut(s) 793, 2240
XapI RAATTY 4 cut(s) 683, 1334, 1894, 2093
XbaI TCTAGA 1 cut(s) 1448
XceI RCATGY 6 cut(s) 1003, 1039, 1168, 1222, 1601, 1737
XhoI CTCGAG 3 cut(s) 140, 1741, 2393
XmiI GTMKAC 4 cut(s) 12, 69, 276, 1425
XmnI GAANNNNTTC 2 cut(s) 1017, 1590
XspI CTAG 7 cut(s) 582, 933, 1449, 1511, 1575, 1692, 1766
ZrmI AGTACT 2 cut(s) 138, 1550
Zsp2I ATGCAT 3 cut(s) 1005, 1276, 1739
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.