Rh7BG030100

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
Physical Location & Seq
Forward (+)
2025176 .. 2028574
3399 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG030100.1

Sequence Viewer

Length: 2607 bp
ATGGAGTTTGCCTCTGGCATTGCTGAGACAGTCTTGGTTAGGCTAGCCTCCTATGCTGCCCAAGAAGTTTGCTTGGCTTGGGGTGCCCAACTTGAGCTCAAGAAGCTCAATAAGACCTTGTTAGCCATCAAACTTGTACTCCAGGATGCAGAGAGGAAGCAAATGCAAAACCCCCTCATCACTCATTGGCTAGGAAACCTCAAAGATGTTTGCAACGATGCTGAGGATGTACTTGACGAATTTGAGTTCCGAAAACTCCGACTCGAAGTGCTCACCAACGACCACCGGAGTGTCAAAGCAAAGGTACACCAATTCTTCTCCCGTTGGAATCCAGTCGTGTTTAACTTCAAAATGGGTCATAAAATCAAAGAGATTAGAGAAAAACTAGATGAGATTGATGCTGAAAAGACAAAGTTTTCTCTCATTCAAGTTGCTGAACTAGTTGATGATCGTGGTGCGCCTCAAAGGGCTCATAATAATAAAAGGGAGACAGACTCTTTACTAGAAGGTCATGTTGTTGGAAGAGATGGTGATAAGGAAAAAATTATCCTTCTCTTTGATGACACCGGTTCCTCCAGTGTCATTAATGTTTCAGTCATTTCCATCTTCGGGTTAGGAGGGTTGGGAAAAACTACACTTGCTAAATCGGTGTATAATGATGCTATGATAGAGAACAAATTTGATATGAGAATGTGGGTATGTGTCTCAGAGAACTTTGATATCCATACATTAGTTCATGGCATTATTGCTGCAACTAAACAAGAATGTGCCGGTGAAAGTTTGGATCTTATGAAAAGGGGGTTGCAAGATATTTTGAGAGATAAAAAGTTTTTGTTAGTGTTGGACGATGTATGGGATAAAGGGTCAACGGGAGTTACGCATCAAAAATGGAGTGAGTTAAAAATTGTGTTAGATGTTGGAGCCAAAGGGAGTAAAATCATTGTAACAACCCGTAATGAATCAGTCGCTTCACTTGTAAACCCTGTACATATGCATTCTTTAGAAAGTCTTTCTCATGAAGACTCCATGACTTTGTTTAAAATAAATGCATTTAATGAAGGAGAGGATCAACGCTATCAACACTTAATAAAAATTGGAGAGGACATTGTGAAGAAGTGTGGAGGGGTTCCCTTAGCACTAGCTACTCTAGGGAGTCTGCTTCGCTCTAAAAGGGAGCGACATCATTGGTTACAAGTAAGAGATGATGAAATATGGAGTATGTCAGAAAACAACAACATTATGGCTGCACTAAAACTGAGCTACAATGCACTGCCACCTCATTTGAAGCCTTGTTTTGCCTTTTGTTCACTTTACCCCAAGGATTATGAATTTGAAAGTGAAGAAATTGTCCAATTATGGATGGCACAAGGCTTCCTCAAGTGCTCAAGAGAAAATGAAGATTTTGGTGAGATGGGCCTGGATTATATAAGGCAGTTTTGTTCCAAGTCTTTGTTTCAAGTTGAGATGGATTCGAAGACTCGTCTAATGTTCAAAATCCATGATTTAGTGCACGATTTAGCAATATCAGTGGCACGGGTAGAGTACTCCACAATTAATTTTCGTCCCTCTACAGCTATTGAAAAAGTCCGACACGTGTCAATATCGGAAAAAGACTTGTCCGGGGAAGTGGCAGGAGTCCCGACATTCATTCTCCAGTCGGAGAAATTGCGGACCATTCTAAGTCTAGATAGTGAAGTTGGGATCTCCAATCAAGATTTTCTAAAGACATGCATCTTGAGATTCAAGTATCTGCGTGCGCTAGATCTGCGTCATTCTACTCTTGAGGGGCTACCAAGTTCCATTGGTAACTTGATTCATTTAAGATATCTCAACCTGGATTTTAATGAGAAGATAAAACAGCTTCCCAGTTCCGTTTGCAAGCTCTTGAATTTGCAGTTCTTAAGCCTTGATGGTTGTCAGGCACTTGAGGAGTTACCCAAAGGTATAGGGAACCTGATCAACCTCAGATTTTTGCTTATAACTACACAGCAGGTGGATTTCCCTAAAGGAGTATTTAGACGCCTCACCTTACTTCAATTTTTAATCATTTCGAAGTGTGAGAATCTGAAATCTCTGGGCAAAGAGATCGAATACCTCACTAATCTTCGTCTACTGGGGATTGGTGACTGTGGAAATGTGGAGTCCTTGCCACCTAACATGAAGAACTTGAGTGCATTACATACTTTGGCGATCGATGATTGTAAGAAGCTTGAGTTAATAAGGTCGGGAGAAGGCATCAGTGGTCTCAGATCATTCATTGTCGCCACATCAGATTTGGAGGCTTTGCCCAATTGGCTTCAAGAGTCTGCAGACACTTTACAGAGCATTGCAATCGTAGAGTGTGATAATCTCACGGCACTTCCAGAGTGGTTACAAAATCTCACCTTGCTGGAGCAACTAGTGATTCGGGACTGCCCCAAATTGTCTGCTTTGCCGCAAGGGATGCATTGCCTCACTGCCTTGAGAGAATTGACCATTGGCGGGTGTCCTGAATTGAGCAAAAGATGCAAAAGGGAAACAGGAGAGGATTGGTCCAAGATCAAACATGTCCAAAAGATTGAACTTGACGACTCTGAGGATGAAGCTGCTGATGATATCGATGTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

868

Amino Acids

98.05

Weight (kDa)

5.77

Isoelectric Point (pI)

39.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 9 - 95 1.6e-20 Rx N-terminal domain
NB-ARC PF00931 196 - 353 8.2e-35 NB-ARC domain
WHD_DRP PF23559 437 - 507 4.2e-21 Disease resistance protein Winged helix domain
LRR_14 PF23598 578 - 776 1.2e-25 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1979
AarI CACCTGC 1 cut(s) 1981
Acc36I ACCTGC 1 cut(s) 1981
AccB1I GGYRCC 1 cut(s) 83
AccI GTMKAC 1 cut(s) 2110
AciI CCGC 3 cut(s) 1669, 2435, 2481
AclWI GGATC 3 cut(s) 792, 1074, 1709
AcsI RAATTY 4 cut(s) 239, 677, 1328, 1888
AcvI CACGTG 1 cut(s) 1594
AcyI GRCGYC 1 cut(s) 2020
AfaI GTAC 5 cut(s) 138, 231, 306, 987, 1544
AfiI CCNNNNNNNGG 2 cut(s) 609, 2481
AflII CTTAAG 1 cut(s) 1900
AflIII ACRYGT 3 cut(s) 1591, 1593, 2545
AgeI ACCGGT 1 cut(s) 566
AhlI ACTAGT 2 cut(s) 439, 2398
AjnI CCWGG 3 cut(s) 141, 1416, 1833
AjuI GAANNNNNNNTTGG 2 cut(s) 2460, 2492
AleI CACNNNNGTG 1 cut(s) 288
AluBI AGCT 9 cut(s) 97, 106, 1142, 1260, 1574, 1861, 1882, 2209, 2585
AluI AGCT 9 cut(s) 97, 106, 1142, 1260, 1574, 1861, 1882, 2209, 2585
Alw21I GWGCWC 4 cut(s) 99, 273, 1385, 1512
Alw26I GTCTC 4 cut(s) 20, 482, 709, 2249
Alw44I GTGCAC 1 cut(s) 1508
AlwI GGATC 3 cut(s) 792, 1074, 1709
AoxI GGCC 1 cut(s) 1414
ApaLI GTGCAC 1 cut(s) 1508
ApeKI GCWGC 4 cut(s) 56, 749, 1244, 2585
ApoI RAATTY 4 cut(s) 239, 677, 1328, 1888
AseI ATTAAT 2 cut(s) 585, 1554
AsiGI ACCGGT 1 cut(s) 566
AspLEI GCGC 2 cut(s) 460, 1759
AspS9I GGNCC 3 cut(s) 1414, 1671, 2532
AsuC2I CCSGG 1 cut(s) 1621
AsuHPI GGTGA 7 cut(s) 265, 542, 785, 1418, 2017, 2135, 2374
AsuII TTCGAA 2 cut(s) 1472, 2051
AsuNHI GCTAGC 1 cut(s) 43
AvaII GGWCC 2 cut(s) 1671, 2532
BaeGI GKGCMC 2 cut(s) 88, 1512
BanI GGYRCC 1 cut(s) 83
BanII GRGCYC 2 cut(s) 99, 472
BbrPI CACGTG 1 cut(s) 1594
BbsI GAAGAC 2 cut(s) 1026, 1481
Bbv12I GWGCWC 4 cut(s) 99, 273, 1385, 1512
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 4 cut(s) 43, 736, 1231, 2572
BccI CCATC 7 cut(s) 134, 521, 611, 1354, 1405, 1459, 1904
BceAI ACGGC 1 cut(s) 2370
BcgI CGANNNNNNTGC 4 cut(s) 2068, 2102, 2314, 2348
BciT130I CCWGG 3 cut(s) 143, 1418, 1835
BclI TGATCA 1 cut(s) 1956
BcnI CCSGG 1 cut(s) 1621
BcoDI GTCTC 4 cut(s) 20, 482, 709, 2249
BcuI ACTAGT 2 cut(s) 439, 2398
BfmI CTRYAG 2 cut(s) 1569, 2307
BfrI CTTAAG 1 cut(s) 1900
BfuAI ACCTGC 1 cut(s) 1981
BglI GCCNNNNNGGC 1 cut(s) 2293
BglII AGATCT 1 cut(s) 1762
BisI GCNGC 5 cut(s) 57, 750, 1245, 2435, 2586
BlsI GCNGC 5 cut(s) 58, 751, 1246, 2436, 2587
BmcAI AGTACT 1 cut(s) 1544
Bme1390I CCNGG 4 cut(s) 143, 1418, 1621, 1835
Bme18I GGWCC 2 cut(s) 1671, 2532
BmgT120I GGNCC 3 cut(s) 1414, 1671, 2532
BmiI GGNNCC 5 cut(s) 85, 571, 922, 1128, 1952
BmrFI CCNGG 4 cut(s) 143, 1418, 1621, 1835
BmrI ACTGGG 2 cut(s) 1860, 2123
BmsI GCATC 9 cut(s) 136, 208, 388, 649, 889, 1740, 2244, 2433, 2495
BmtI GCTAGC 1 cut(s) 47
BmuI ACTGGG 2 cut(s) 1860, 2123
BoxI GACNNNNGTC 1 cut(s) 1594
BpiI GAAGAC 2 cut(s) 1026, 1481
BplI GAGNNNNNCTC 3 cut(s) 28, 479, 511
BpmI CTGGAG 4 cut(s) 125, 559, 1637, 2411
Bpu10I CCTNAGC 2 cut(s) 222, 1132
Bpu14I TTCGAA 2 cut(s) 1472, 2051
BpuMI CCSGG 1 cut(s) 1621
Bsa29I ATCGAT 2 cut(s) 2193, 2598
BsaAI YACGTR 1 cut(s) 1594
BsaHI GRCGYC 1 cut(s) 2020
BsaI GGTCTC 1 cut(s) 2249
BsaJI CCNNGG 2 cut(s) 1317, 1620
BsaWI WCCGGW 2 cut(s) 285, 566
BsaXI ACNNNNNCTCC 2 cut(s) 123, 153
Bsc4I CCNNNNNNNGG 2 cut(s) 609, 2481
Bse118I RCCGGY 2 cut(s) 566, 770
Bse1I ACTGG 5 cut(s) 332, 576, 1654, 1866, 2118
Bse3DI GCAATG 3 cut(s) 18, 2325, 2446
BseBI CCWGG 3 cut(s) 143, 1418, 1835
BseCI ATCGAT 2 cut(s) 2193, 2598
BseDI CCNNGG 2 cut(s) 1317, 1620
BseGI GGATG 5 cut(s) 151, 232, 1365, 2448, 2584
BseLI CCNNNNNNNGG 2 cut(s) 609, 2481
BseMI GCAATG 3 cut(s) 18, 2325, 2446
BseMII CTCAG 7 cut(s) 15, 213, 720, 1247, 1978, 2260, 2565
BseNI ACTGG 5 cut(s) 332, 576, 1654, 1866, 2118
BseRI GAGGAG 1 cut(s) 1943
BseSI GKGCMC 2 cut(s) 88, 1512
BseXI GCAGC 4 cut(s) 43, 736, 1231, 2572
BsgI GTGCAG 1 cut(s) 1230
Bsh1285I CGRYCG 1 cut(s) 2193
BshFI GGCC 1 cut(s) 1416
BshNI GGYRCC 1 cut(s) 83
BshTI ACCGGT 1 cut(s) 566
BshVI ATCGAT 2 cut(s) 2193, 2598
BsiEI CGRYCG 1 cut(s) 2193
BsiHKAI GWGCWC 4 cut(s) 99, 273, 1385, 1512
BsiSI CCGG 4 cut(s) 286, 567, 771, 1620
BslFI GGGAC 3 cut(s) 1548, 1622, 2423
BslI CCNNNNNNNGG 2 cut(s) 609, 2481
BsmAI GTCTC 4 cut(s) 20, 482, 709, 2249
BsmFI GGGAC 3 cut(s) 1548, 1622, 2423
BsmI GAATGC 1 cut(s) 994
BsnI GGCC 1 cut(s) 1416
Bso31I GGTCTC 1 cut(s) 2249
Bsp119I TTCGAA 2 cut(s) 1472, 2051
Bsp1286I GDGCHC 6 cut(s) 88, 99, 273, 472, 1385, 1512
Bsp1407I TGTACA 1 cut(s) 985
BspACI CCGC 3 cut(s) 1669, 2435, 2481
BspANI GGCC 1 cut(s) 1416
BspCNI CTCAG 7 cut(s) 16, 214, 719, 1248, 1977, 2259, 2566
BspDI ATCGAT 2 cut(s) 2193, 2598
BspHI TCATGA 1 cut(s) 1015
BspLI GGNNCC 5 cut(s) 85, 571, 922, 1128, 1952
BspMAI CTGCAG 1 cut(s) 2311
BspMI ACCTGC 1 cut(s) 1981
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 3 cut(s) 792, 1074, 1709
BspT104I TTCGAA 2 cut(s) 1472, 2051
BspT107I GGYRCC 1 cut(s) 83
BspTI CTTAAG 1 cut(s) 1900
BspTNI GGTCTC 1 cut(s) 2249
BsrDI GCAATG 3 cut(s) 18, 2325, 2446
BsrFI RCCGGY 2 cut(s) 566, 770
BsrGI TGTACA 1 cut(s) 985
BsrI ACTGG 5 cut(s) 332, 576, 1654, 1866, 2118
BssAI RCCGGY 2 cut(s) 566, 770
BssECI CCNNGG 2 cut(s) 1317, 1620
BssNI GRCGYC 1 cut(s) 2020
BssT1I CCWWGG 1 cut(s) 1317
Bst2UI CCWGG 3 cut(s) 143, 1418, 1835
Bst4CI ACNGT 2 cut(s) 31, 2129
Bst6I CTCTTC 1 cut(s) 517
BstACI GRCGYC 1 cut(s) 2020
BstAFI CTTAAG 1 cut(s) 1900
BstAPI GCANNNNNTGC 2 cut(s) 2443, 2505
BstAUI TGTACA 1 cut(s) 985
BstBAI YACGTR 1 cut(s) 1594
BstBI TTCGAA 2 cut(s) 1472, 2051
BstC8I GCNNGC 3 cut(s) 45, 1755, 1880
BstDEI CTNAG 9 cut(s) 24, 222, 706, 1132, 1256, 1679, 1964, 2246, 2574
BstF5I GGATG 5 cut(s) 151, 232, 1365, 2448, 2584
BstHHI GCGC 2 cut(s) 460, 1759
BstMAI GTCTC 4 cut(s) 20, 482, 709, 2249
BstMCI CGRYCG 1 cut(s) 2193
BstMWI GCNNNNNNNGC 7 cut(s) 53, 83, 103, 1765, 2293, 2443, 2505
BstNI CCWGG 3 cut(s) 143, 1418, 1835
BstNSI RCATGY 2 cut(s) 1731, 2549
BstPAI GACNNNNGTC 1 cut(s) 1594
BstSCI CCNGG 4 cut(s) 141, 1416, 1619, 1833
BstSFI CTRYAG 2 cut(s) 1569, 2307
BstSLI GKGCMC 2 cut(s) 88, 1512
BstV1I GCAGC 4 cut(s) 43, 736, 1231, 2572
BstV2I GAAGAC 2 cut(s) 1026, 1481
BstX2I RGATCY 3 cut(s) 784, 1701, 1762
BstYI RGATCY 3 cut(s) 784, 1701, 1762
Bsu15I ATCGAT 2 cut(s) 2193, 2598
BsuRI GGCC 1 cut(s) 1416
BsuTUI ATCGAT 2 cut(s) 2193, 2598
BtsCI GGATG 5 cut(s) 151, 232, 1365, 2448, 2584
BtsI GCAGTG 2 cut(s) 1268, 2454
BtsIMutI CAGTG 5 cut(s) 583, 1268, 1533, 2245, 2454
BveI ACCTGC 1 cut(s) 1981
Cac8I GCNNGC 3 cut(s) 45, 1755, 1880
CciI TCATGA 1 cut(s) 1015
CfoI GCGC 2 cut(s) 460, 1759
Cfr10I RCCGGY 2 cut(s) 566, 770
Cfr13I GGNCC 3 cut(s) 1414, 1671, 2532
ClaI ATCGAT 2 cut(s) 2193, 2598
CseI GACGC 2 cut(s) 1757, 2028
Csp6I GTAC 5 cut(s) 137, 230, 305, 986, 1543
CspAI ACCGGT 1 cut(s) 566
CspCI CAANNNNNGTGG 4 cut(s) 1263, 1298, 1509, 1544
CviAII CATG 8 cut(s) 512, 737, 1016, 1027, 1499, 1728, 2158, 2546
CviQI GTAC 5 cut(s) 137, 230, 305, 986, 1543
DdeI CTNAG 9 cut(s) 24, 222, 706, 1132, 1256, 1679, 1964, 2246, 2574
DraI TTTAAA 1 cut(s) 1039
Eam1104I CTCTTC 1 cut(s) 517
EarI CTCTTC 1 cut(s) 517
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 1 cut(s) 1317
Eco24I GRGCYC 2 cut(s) 99, 472
Eco31I GGTCTC 1 cut(s) 2249
Eco32I GATATC 3 cut(s) 721, 1826, 2596
Eco47I GGWCC 2 cut(s) 1671, 2532
Eco53kI GAGCTC 1 cut(s) 97
Eco72I CACGTG 1 cut(s) 1594
EcoICRI GAGCTC 1 cut(s) 97
EcoRII CCWGG 3 cut(s) 141, 1416, 1833
EcoRV GATATC 3 cut(s) 721, 1826, 2596
EcoT14I CCWWGG 1 cut(s) 1317
EcoT22I ATGCAT 4 cut(s) 996, 1051, 1733, 2448
EcoT38I GRGCYC 2 cut(s) 99, 472
ErhI CCWWGG 1 cut(s) 1317
FaeI CATG 8 cut(s) 515, 740, 1019, 1030, 1502, 1731, 2161, 2549
FaqI GGGAC 3 cut(s) 1548, 1622, 2423
FatI CATG 8 cut(s) 511, 736, 1015, 1026, 1498, 1727, 2157, 2545
FauI CCCGC 1 cut(s) 2474
FauNDI CATATG 1 cut(s) 990
FbaI TGATCA 1 cut(s) 1956
FblI GTMKAC 1 cut(s) 2110
Fnu4HI GCNGC 5 cut(s) 57, 750, 1245, 2435, 2586
FokI GGATG 5 cut(s) 158, 239, 1372, 2455, 2591
FriOI GRGCYC 2 cut(s) 99, 472
Fsp4HI GCNGC 5 cut(s) 57, 750, 1245, 2435, 2586
GlaI GCGC 2 cut(s) 459, 1758
GluI GCNGC 5 cut(s) 57, 750, 1245, 2435, 2586
GsuI CTGGAG 4 cut(s) 125, 559, 1637, 2411
HaeIII GGCC 1 cut(s) 1416
HapII CCGG 4 cut(s) 286, 567, 771, 1620
HgaI GACGC 2 cut(s) 1757, 2028
HhaI GCGC 2 cut(s) 460, 1759
Hin1I GRCGYC 1 cut(s) 2020
Hin1II CATG 8 cut(s) 515, 740, 1019, 1030, 1502, 1731, 2161, 2549
Hin6I GCGC 2 cut(s) 458, 1757
HinP1I GCGC 2 cut(s) 458, 1757
HincII GTYRAC 1 cut(s) 867
HindII GTYRAC 1 cut(s) 867
HindIII AAGCTT 1 cut(s) 2207
HpaII CCGG 4 cut(s) 286, 567, 771, 1620
HphI GGTGA 7 cut(s) 265, 542, 785, 1418, 2017, 2135, 2374
Hpy166II GTNNAC 6 cut(s) 307, 867, 979, 1307, 1510, 2111
Hpy8I GTNNAC 6 cut(s) 307, 867, 979, 1307, 1510, 2111
HpyAV CCTTC 4 cut(s) 500, 560, 1052, 2225
HpyCH4III ACNGT 2 cut(s) 31, 2129
HpyCH4IV ACGT 1 cut(s) 1593
HpyF10VI GCNNNNNNNGC 7 cut(s) 53, 83, 103, 1765, 2293, 2443, 2505
HpyF3I CTNAG 9 cut(s) 24, 222, 706, 1132, 1256, 1679, 1964, 2246, 2574
HpySE526I ACGT 1 cut(s) 1593
Hsp92I GRCGYC 1 cut(s) 2020
Hsp92II CATG 8 cut(s) 515, 740, 1019, 1030, 1502, 1731, 2161, 2549
HspAI GCGC 2 cut(s) 458, 1757
Ksp22I TGATCA 1 cut(s) 1956
LmnI GCTCC 3 cut(s) 920, 1174, 2392
Lsp1109I GCAGC 4 cut(s) 43, 736, 1231, 2572
LweI GCATC 9 cut(s) 136, 208, 388, 649, 889, 1740, 2244, 2433, 2495
MaeII ACGT 1 cut(s) 1593
MaeIII GTNAC 7 cut(s) 874, 943, 1188, 1805, 1932, 2123, 2370
MfeI CAATTG 1 cut(s) 2290
MflI RGATCY 3 cut(s) 784, 1701, 1762
MhlI GDGCHC 6 cut(s) 88, 99, 273, 472, 1385, 1512
MlyI GAGTC 9 cut(s) 255, 488, 1016, 1162, 1471, 1644, 2150, 2312, 2564
MmeI TCCRAC 7 cut(s) 283, 305, 499, 822, 898, 1612, 1638
Mph1103I ATGCAT 4 cut(s) 996, 1051, 1733, 2448
MslI CAYNNNNRTG 1 cut(s) 288
MspCI CTTAAG 1 cut(s) 1900
MspI CCGG 4 cut(s) 286, 567, 771, 1620
MspR9I CCNGG 4 cut(s) 143, 1418, 1621, 1835
MunI CAATTG 1 cut(s) 2290
Mva1269I GAATGC 1 cut(s) 994
MvaI CCWGG 3 cut(s) 143, 1418, 1835
MwoI GCNNNNNNNGC 7 cut(s) 53, 83, 103, 1765, 2293, 2443, 2505
NciI CCSGG 1 cut(s) 1621
NdeI CATATG 1 cut(s) 990
NheI GCTAGC 1 cut(s) 43
NlaIII CATG 8 cut(s) 515, 740, 1019, 1030, 1502, 1731, 2161, 2549
NlaIV GGNNCC 5 cut(s) 85, 571, 922, 1128, 1952
NmuCI GTSAC 1 cut(s) 2123
NsiI ATGCAT 4 cut(s) 996, 1051, 1733, 2448
NspI RCATGY 2 cut(s) 1731, 2549
NspV TTCGAA 2 cut(s) 1472, 2051
OliI CACNNNNGTG 1 cut(s) 288
PagI TCATGA 1 cut(s) 1015
PaqCI CACCTGC 1 cut(s) 1981
PciI ACATGT 1 cut(s) 2545
PctI GAATGC 1 cut(s) 994
PfeI GAWTC 7 cut(s) 328, 959, 1469, 1740, 1813, 2062, 2404
PfoI TCCNGGA 1 cut(s) 141
PinAI ACCGGT 1 cut(s) 566
PkrI GCNGC 5 cut(s) 58, 751, 1246, 2436, 2587
Ple19I CGATCG 1 cut(s) 2193
PleI GAGTC 9 cut(s) 255, 488, 1016, 1161, 1471, 1643, 2149, 2311, 2564
PmaCI CACGTG 1 cut(s) 1594
PmlI CACGTG 1 cut(s) 1594
PpsI GAGTC 9 cut(s) 255, 488, 1016, 1161, 1471, 1643, 2149, 2311, 2564
Ppu21I YACGTR 1 cut(s) 1594
PscI ACATGT 1 cut(s) 2545
PshAI GACNNNNGTC 1 cut(s) 1594
PshBI ATTAAT 2 cut(s) 585, 1554
PsiI TTATAA 1 cut(s) 1979
Psp124BI GAGCTC 1 cut(s) 99
Psp6I CCWGG 3 cut(s) 141, 1416, 1833
PspCI CACGTG 1 cut(s) 1594
PspGI CCWGG 3 cut(s) 141, 1416, 1833
PspN4I GGNNCC 5 cut(s) 85, 571, 922, 1128, 1952
PspPI GGNCC 3 cut(s) 1414, 1671, 2532
PstI CTGCAG 1 cut(s) 2311
PsuI RGATCY 3 cut(s) 784, 1701, 1762
PvuI CGATCG 1 cut(s) 2193
RsaI GTAC 5 cut(s) 138, 231, 306, 987, 1544
RsaNI GTAC 5 cut(s) 137, 230, 305, 986, 1543
RseI CAYNNNNRTG 1 cut(s) 288
SacI GAGCTC 1 cut(s) 99
SatI GCNGC 5 cut(s) 57, 750, 1245, 2435, 2586
Sau96I GGNCC 3 cut(s) 1414, 1671, 2532
ScaI AGTACT 1 cut(s) 1544
SchI GAGTC 9 cut(s) 255, 488, 1016, 1162, 1471, 1644, 2150, 2312, 2564
ScrFI CCNGG 4 cut(s) 143, 1418, 1621, 1835
SduI GDGCHC 6 cut(s) 88, 99, 273, 472, 1385, 1512
SfaNI GCATC 9 cut(s) 136, 208, 388, 649, 889, 1740, 2244, 2433, 2495
SfcI CTRYAG 2 cut(s) 1569, 2307
SfuI TTCGAA 2 cut(s) 1472, 2051
SinI GGWCC 2 cut(s) 1671, 2532
SmiMI CAYNNNNRTG 1 cut(s) 288
SpeI ACTAGT 2 cut(s) 439, 2398
SsiI CCGC 3 cut(s) 1669, 2435, 2481
SstI GAGCTC 1 cut(s) 99
StyD4I CCNGG 4 cut(s) 141, 1416, 1619, 1833
StyI CCWWGG 1 cut(s) 1317
TaaI ACNGT 2 cut(s) 31, 2129
TaiI ACGT 1 cut(s) 1596
TaqI TCGA 6 cut(s) 264, 1472, 2051, 2088, 2193, 2598
TatI WGTACW 4 cut(s) 136, 229, 985, 1542
TauI GCSGC 1 cut(s) 2437
TfiI GAWTC 7 cut(s) 328, 959, 1469, 1740, 1813, 2062, 2404
TscAI CASTG 5 cut(s) 583, 1275, 1533, 2245, 2461
TseFI GTSAC 1 cut(s) 2123
TseI GCWGC 4 cut(s) 56, 749, 1244, 2585
Tsp45I GTSAC 1 cut(s) 2123
TspGWI ACGGA 1 cut(s) 1861
TspRI CASTG 5 cut(s) 583, 1275, 1533, 2245, 2461
Vha464I CTTAAG 1 cut(s) 1900
VneI GTGCAC 1 cut(s) 1508
VpaK11BI GGWCC 2 cut(s) 1671, 2532
VspI ATTAAT 2 cut(s) 585, 1554
XapI RAATTY 4 cut(s) 239, 677, 1328, 1888
XbaI TCTAGA 1 cut(s) 1684
XceI RCATGY 2 cut(s) 1731, 2549
XcmI CCANNNNNNNNNTGG 1 cut(s) 2272
XmiI GTMKAC 1 cut(s) 2110
ZrmI AGTACT 1 cut(s) 1544
Zsp2I ATGCAT 4 cut(s) 996, 1051, 1733, 2448
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.