Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 93 | 5.7e-19 | Rx N-terminal domain |
| NB-ARC | PF00931 | 177 - 356 | 4e-32 | NB-ARC domain |
| WHD_DRP | PF23559 | 439 - 509 | 1.6e-20 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 571 - 778 | 1e-26 | Leucine-rich repeat region |
| LRR_R13L1-DRL21 | PF25019 | 746 - 805 | 1.8e-06 | R13L1/DRL21 LRRs |
| DUF3511 | PF12023 | 875 - 908 | 2.9e-16 | Domain of unknown function (DUF3511) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 2020 |
| Acc36I | ACCTGC | 1 cut(s) | 1258 |
| AccB1I | GGYRCC | 1 cut(s) | 83 |
| AccI | GTMKAC | 3 cut(s) | 276, 996, 2660 |
| AccIII | TCCGGA | 1 cut(s) | 2365 |
| AciI | CCGC | 6 cut(s) | 259, 285, 1729, 1753, 2435, 2735 |
| AclI | AACGTT | 1 cut(s) | 1717 |
| AclWI | GGATC | 4 cut(s) | 61, 443, 976, 2077 |
| AcoI | YGGCCR | 2 cut(s) | 2610, 2732 |
| AcsI | RAATTY | 3 cut(s) | 169, 682, 1888 |
| AcuI | CTGAAG | 6 cut(s) | 465, 495, 2015, 2192, 2686, 2838 |
| AcyI | GRCGYC | 1 cut(s) | 2017 |
| AfaI | GTAC | 4 cut(s) | 14, 138, 306, 1550 |
| AfeI | AGCGCT | 1 cut(s) | 1082 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 78, 615, 1972, 2628 |
| AflIII | ACRYGT | 2 cut(s) | 1218, 1597 |
| AhdI | GACNNNNNGTC | 2 cut(s) | 1036, 2724 |
| AhlI | ACTAGT | 2 cut(s) | 133, 385 |
| AjiI | CACGTC | 1 cut(s) | 2549 |
| AjnI | CCWGG | 1 cut(s) | 1971 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2258, 2290 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 231, 263 |
| Alw21I | GWGCWC | 1 cut(s) | 462 |
| Alw26I | GTCTC | 7 cut(s) | 403, 482, 1023, 1628, 1889, 2024, 2711 |
| AlwI | GGATC | 4 cut(s) | 61, 443, 976, 2077 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1032 |
| Ama87I | CYCGRG | 2 cut(s) | 1735, 2390 |
| Aor13HI | TCCGGA | 1 cut(s) | 2365 |
| Aor51HI | AGCGCT | 1 cut(s) | 1082 |
| AoxI | GGCC | 4 cut(s) | 1775, 2233, 2610, 2732 |
| ApeKI | GCWGC | 4 cut(s) | 744, 1078, 2505, 2822 |
| ApoI | RAATTY | 3 cut(s) | 169, 682, 1888 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 481, 513 |
| AseI | ATTAAT | 1 cut(s) | 737 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 683, 1590, 2699 |
| AspLEI | GCGC | 1 cut(s) | 1083 |
| AspS9I | GGNCC | 2 cut(s) | 793, 2234 |
| AsuHPI | GGTGA | 8 cut(s) | 91, 1433, 1987, 2014, 2224, 2351, 2537, 2566 |
| AsuNHI | GCTAGC | 2 cut(s) | 43, 2645 |
| AvaI | CYCGRG | 2 cut(s) | 1735, 2390 |
| AvaII | GGWCC | 1 cut(s) | 793 |
| BaeGI | GKGCMC | 1 cut(s) | 88 |
| BanI | GGYRCC | 1 cut(s) | 83 |
| BbsI | GAAGAC | 2 cut(s) | 1431, 2237 |
| Bbv12I | GWGCWC | 1 cut(s) | 462 |
| BbvI | GCAGC | 4 cut(s) | 731, 1090, 2492, 2809 |
| BccI | CCATC | 5 cut(s) | 134, 318, 617, 1880, 2536 |
| BceAI | ACGGC | 2 cut(s) | 31, 2373 |
| BciT130I | CCWGG | 1 cut(s) | 1973 |
| BciVI | GTATCC | 1 cut(s) | 2629 |
| BclI | TGATCA | 1 cut(s) | 1956 |
| BcoDI | GTCTC | 7 cut(s) | 403, 482, 1023, 1628, 1889, 2024, 2711 |
| BcuI | ACTAGT | 2 cut(s) | 133, 385 |
| BfaI | CTAG | 9 cut(s) | 44, 134, 386, 453, 1449, 1511, 1575, 1760, 2646 |
| BfmI | CTRYAG | 3 cut(s) | 1155, 2310, 2321 |
| BfoI | RGCGCY | 1 cut(s) | 1084 |
| BfuAI | ACCTGC | 1 cut(s) | 1258 |
| BfuI | GTATCC | 1 cut(s) | 2629 |
| BglII | AGATCT | 3 cut(s) | 1451, 1474, 1762 |
| BisI | GCNGC | 6 cut(s) | 745, 1079, 2435, 2506, 2735, 2823 |
| BlsI | GCNGC | 6 cut(s) | 746, 1080, 2436, 2507, 2736, 2824 |
| BmcAI | AGTACT | 2 cut(s) | 138, 1550 |
| Bme1390I | CCNGG | 1 cut(s) | 1973 |
| Bme18I | GGWCC | 1 cut(s) | 793 |
| BmeRI | GACNNNNNGTC | 2 cut(s) | 1036, 2724 |
| BmeT110I | CYCGRG | 2 cut(s) | 1735, 2390 |
| BmgBI | CACGTC | 1 cut(s) | 2549 |
| BmgT120I | GGNCC | 2 cut(s) | 793, 2234 |
| BmiI | GGNNCC | 4 cut(s) | 85, 1356, 2752, 2764 |
| BmrFI | CCNGG | 1 cut(s) | 1973 |
| BmsI | GCATC | 5 cut(s) | 136, 459, 717, 1261, 1740 |
| BmtI | GCTAGC | 2 cut(s) | 47, 2649 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1600 |
| BpiI | GAAGAC | 2 cut(s) | 1431, 2237 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 479, 511 |
| BpmI | CTGGAG | 2 cut(s) | 263, 2769 |
| BpuEI | CTTGAG | 5 cut(s) | 1643, 1802, 1946, 2223, 2696 |
| BsaBI | GATNNNNATC | 1 cut(s) | 707 |
| BsaHI | GRCGYC | 1 cut(s) | 2017 |
| BsaJI | CCNNGG | 3 cut(s) | 72, 463, 2291 |
| BsaWI | WCCGGW | 1 cut(s) | 2365 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 26, 989, 1019, 1886, 1916 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 78, 615, 1972, 2628 |
| Bse1I | ACTGG | 2 cut(s) | 246, 332 |
| Bse3DI | GCAATG | 2 cut(s) | 18, 2446 |
| Bse8I | GATNNNNATC | 1 cut(s) | 707 |
| BseAI | TCCGGA | 1 cut(s) | 2365 |
| BseBI | CCWGG | 1 cut(s) | 1973 |
| BseDI | CCNNGG | 3 cut(s) | 72, 463, 2291 |
| BseGI | GGATG | 3 cut(s) | 474, 1484, 2057 |
| BseJI | GATNNNNATC | 1 cut(s) | 707 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 78, 615, 1972, 2628 |
| BseMI | GCAATG | 2 cut(s) | 18, 2446 |
| BseMII | CTCAG | 3 cut(s) | 726, 1780, 2448 |
| BseNI | ACTGG | 2 cut(s) | 246, 332 |
| BseRI | GAGGAG | 9 cut(s) | 602, 1083, 1088, 1146, 1799, 1943, 2543, 2793, 2796 |
| BseSI | GKGCMC | 1 cut(s) | 88 |
| BseXI | GCAGC | 4 cut(s) | 731, 1090, 2492, 2809 |
| BseYI | CCCAGC | 1 cut(s) | 2825 |
| BsgI | GTGCAG | 1 cut(s) | 1236 |
| BshFI | GGCC | 4 cut(s) | 1777, 2235, 2612, 2734 |
| BshNI | GGYRCC | 1 cut(s) | 83 |
| BsiHKAI | GWGCWC | 1 cut(s) | 462 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1735, 2390 |
| BsiSI | CCGG | 1 cut(s) | 2366 |
| BslFI | GGGAC | 3 cut(s) | 369, 1554, 2698 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 78, 615, 1972, 2628 |
| BsmAI | GTCTC | 7 cut(s) | 403, 482, 1023, 1628, 1889, 2024, 2711 |
| BsmBI | CGTCTC | 2 cut(s) | 482, 2024 |
| BsmFI | GGGAC | 3 cut(s) | 369, 1554, 2698 |
| BsmI | GAATGC | 1 cut(s) | 2417 |
| BsnI | GGCC | 4 cut(s) | 1777, 2235, 2612, 2734 |
| BsoBI | CYCGRG | 2 cut(s) | 1735, 2390 |
| Bsp1286I | GDGCHC | 2 cut(s) | 88, 462 |
| Bsp13I | TCCGGA | 1 cut(s) | 2365 |
| BspACI | CCGC | 6 cut(s) | 259, 285, 1729, 1753, 2435, 2735 |
| BspANI | GGCC | 4 cut(s) | 1777, 2235, 2612, 2734 |
| BspCNI | CTCAG | 3 cut(s) | 725, 1779, 2449 |
| BspEI | TCCGGA | 1 cut(s) | 2365 |
| BspHI | TCATGA | 2 cut(s) | 1383, 1516 |
| BspLI | GGNNCC | 4 cut(s) | 85, 1356, 2752, 2764 |
| BspMAI | CTGCAG | 1 cut(s) | 2314 |
| BspMI | ACCTGC | 1 cut(s) | 1258 |
| BspOI | GCTAGC | 2 cut(s) | 47, 2649 |
| BspPI | GGATC | 4 cut(s) | 61, 443, 976, 2077 |
| BspQI | GCTCTTC | 1 cut(s) | 2690 |
| BspT107I | GGYRCC | 1 cut(s) | 83 |
| BsrDI | GCAATG | 2 cut(s) | 18, 2446 |
| BsrI | ACTGG | 2 cut(s) | 246, 332 |
| BssECI | CCNNGG | 3 cut(s) | 72, 463, 2291 |
| BssNAI | GTATAC | 2 cut(s) | 997, 2661 |
| BssNI | GRCGYC | 1 cut(s) | 2017 |
| BssT1I | CCWWGG | 2 cut(s) | 72, 2291 |
| Bst1107I | GTATAC | 2 cut(s) | 997, 2661 |
| Bst2UI | CCWGG | 1 cut(s) | 1973 |
| Bst4CI | ACNGT | 8 cut(s) | 414, 1156, 1296, 1343, 1440, 1558, 2112, 2665 |
| Bst6I | CTCTTC | 4 cut(s) | 1626, 2073, 2630, 2690 |
| BstACI | GRCGYC | 1 cut(s) | 2017 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 83, 2443, 2505 |
| BstC8I | GCNNGC | 3 cut(s) | 45, 1166, 2647 |
| BstDEI | CTNAG | 6 cut(s) | 435, 712, 1009, 1392, 1766, 2457 |
| BstF5I | GGATG | 3 cut(s) | 474, 1484, 2057 |
| BstH2I | RGCGCY | 1 cut(s) | 1084 |
| BstHHI | GCGC | 1 cut(s) | 1083 |
| BstMAI | GTCTC | 7 cut(s) | 403, 482, 1023, 1628, 1889, 2024, 2711 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 53, 83, 440, 2443, 2505 |
| BstNI | CCWGG | 1 cut(s) | 1973 |
| BstNSI | RCATGY | 6 cut(s) | 56, 1003, 1039, 1168, 1222, 1601 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1600 |
| BstSCI | CCNGG | 1 cut(s) | 1971 |
| BstSFI | CTRYAG | 3 cut(s) | 1155, 2310, 2321 |
| BstSLI | GKGCMC | 1 cut(s) | 88 |
| BstV1I | GCAGC | 4 cut(s) | 731, 1090, 2492, 2809 |
| BstV2I | GAAGAC | 2 cut(s) | 1431, 2237 |
| BstX2I | RGATCY | 6 cut(s) | 66, 448, 1451, 1474, 1762, 2082 |
| BstYI | RGATCY | 6 cut(s) | 66, 448, 1451, 1474, 1762, 2082 |
| BstZ17I | GTATAC | 2 cut(s) | 997, 2661 |
| BsuI | GTATCC | 1 cut(s) | 2629 |
| BsuRI | GGCC | 4 cut(s) | 1777, 2235, 2612, 2734 |
| BtrI | CACGTC | 1 cut(s) | 2549 |
| BtsCI | GGATG | 3 cut(s) | 474, 1484, 2057 |
| BtsI | GCAGTG | 1 cut(s) | 30 |
| BtsIMutI | CAGTG | 5 cut(s) | 30, 570, 1348, 1539, 1774 |
| BveI | ACCTGC | 1 cut(s) | 1258 |
| Cac8I | GCNNGC | 3 cut(s) | 45, 1166, 2647 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1032 |
| CciI | TCATGA | 2 cut(s) | 1383, 1516 |
| CfoI | GCGC | 1 cut(s) | 1083 |
| Cfr13I | GGNCC | 2 cut(s) | 793, 2234 |
| CseI | GACGC | 1 cut(s) | 1928 |
| CsiI | ACCWGGT | 1 cut(s) | 1971 |
| Csp6I | GTAC | 4 cut(s) | 13, 137, 305, 1549 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1515, 1550 |
| CviQI | GTAC | 4 cut(s) | 13, 137, 305, 1549 |
| DdeI | CTNAG | 6 cut(s) | 435, 712, 1009, 1392, 1766, 2457 |
| DraI | TTTAAA | 2 cut(s) | 1063, 1498 |
| DriI | GACNNNNNGTC | 2 cut(s) | 1036, 2724 |
| EaeI | YGGCCR | 2 cut(s) | 2610, 2732 |
| Eam1104I | CTCTTC | 4 cut(s) | 1626, 2073, 2630, 2690 |
| Eam1105I | GACNNNNNGTC | 2 cut(s) | 1036, 2724 |
| EarI | CTCTTC | 4 cut(s) | 1626, 2073, 2630, 2690 |
| Eco130I | CCWWGG | 2 cut(s) | 72, 2291 |
| Eco32I | GATATC | 2 cut(s) | 577, 727 |
| Eco47I | GGWCC | 1 cut(s) | 793 |
| Eco47III | AGCGCT | 1 cut(s) | 1082 |
| Eco57I | CTGAAG | 6 cut(s) | 465, 495, 2015, 2192, 2686, 2838 |
| Eco88I | CYCGRG | 2 cut(s) | 1735, 2390 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2234 |
| EcoRI | GAATTC | 1 cut(s) | 169 |
| EcoRII | CCWGG | 1 cut(s) | 1971 |
| EcoRV | GATATC | 2 cut(s) | 577, 727 |
| EcoT14I | CCWWGG | 2 cut(s) | 72, 2291 |
| EcoT22I | ATGCAT | 2 cut(s) | 710, 1276 |
| ErhI | CCWWGG | 2 cut(s) | 72, 2291 |
| Esp3I | CGTCTC | 2 cut(s) | 482, 2024 |
| FaqI | GGGAC | 3 cut(s) | 369, 1554, 2698 |
| FauI | CCCGC | 3 cut(s) | 278, 1736, 1746 |
| FauNDI | CATATG | 2 cut(s) | 1416, 2330 |
| FbaI | TGATCA | 1 cut(s) | 1956 |
| FblI | GTMKAC | 3 cut(s) | 276, 996, 2660 |
| Fnu4HI | GCNGC | 6 cut(s) | 745, 1079, 2435, 2506, 2735, 2823 |
| FokI | GGATG | 3 cut(s) | 481, 1471, 2064 |
| Fsp4HI | GCNGC | 6 cut(s) | 745, 1079, 2435, 2506, 2735, 2823 |
| FspBI | CTAG | 9 cut(s) | 44, 134, 386, 453, 1449, 1511, 1575, 1760, 2646 |
| GlaI | GCGC | 1 cut(s) | 1082 |
| GluI | GCNGC | 6 cut(s) | 745, 1079, 2435, 2506, 2735, 2823 |
| GsaI | CCCAGC | 1 cut(s) | 2829 |
| GsuI | CTGGAG | 2 cut(s) | 263, 2769 |
| HaeII | RGCGCY | 1 cut(s) | 1084 |
| HaeIII | GGCC | 4 cut(s) | 1777, 2235, 2612, 2734 |
| HapII | CCGG | 1 cut(s) | 2366 |
| HgaI | GACGC | 1 cut(s) | 1928 |
| HhaI | GCGC | 1 cut(s) | 1083 |
| Hin1I | GRCGYC | 1 cut(s) | 2017 |
| Hin6I | GCGC | 1 cut(s) | 1081 |
| HinP1I | GCGC | 1 cut(s) | 1081 |
| HincII | GTYRAC | 1 cut(s) | 277 |
| HindII | GTYRAC | 1 cut(s) | 277 |
| HindIII | AAGCTT | 1 cut(s) | 2204 |
| HinfI | GANTC | 9 cut(s) | 328, 494, 988, 1711, 1740, 2138, 2306, 2573, 2686 |
| HpaII | CCGG | 1 cut(s) | 2366 |
| HphI | GGTGA | 8 cut(s) | 91, 1433, 1987, 2014, 2224, 2351, 2537, 2566 |
| Hpy166II | GTNNAC | 8 cut(s) | 13, 28, 277, 997, 1313, 2382, 2661, 2814 |
| Hpy188I | TCNGA | 8 cut(s) | 464, 514, 715, 1024, 1208, 1840, 1967, 2578 |
| Hpy8I | GTNNAC | 8 cut(s) | 13, 28, 277, 997, 1313, 2382, 2661, 2814 |
| Hpy99I | CGWCG | 2 cut(s) | 2573, 2618 |
| HpyAV | CCTTC | 3 cut(s) | 1007, 2111, 2225 |
| HpyCH4III | ACNGT | 8 cut(s) | 414, 1156, 1296, 1343, 1440, 1558, 2112, 2665 |
| HpyCH4IV | ACGT | 5 cut(s) | 30, 1717, 2017, 2548, 2616 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 53, 83, 440, 2443, 2505 |
| HpyF3I | CTNAG | 6 cut(s) | 435, 712, 1009, 1392, 1766, 2457 |
| HpySE526I | ACGT | 5 cut(s) | 30, 1717, 2017, 2548, 2616 |
| Hsp92I | GRCGYC | 1 cut(s) | 2017 |
| HspAI | GCGC | 1 cut(s) | 1081 |
| Kpn2I | TCCGGA | 1 cut(s) | 2365 |
| Ksp22I | TGATCA | 1 cut(s) | 1956 |
| LguI | GCTCTTC | 1 cut(s) | 2690 |
| LmnI | GCTCC | 9 cut(s) | 465, 871, 929, 1075, 1161, 1224, 1786, 2420, 2750 |
| Lsp1109I | GCAGC | 4 cut(s) | 731, 1090, 2492, 2809 |
| LweI | GCATC | 5 cut(s) | 136, 459, 717, 1261, 1740 |
| MabI | ACCWGGT | 1 cut(s) | 1971 |
| MaeI | CTAG | 9 cut(s) | 44, 134, 386, 453, 1449, 1511, 1575, 1760, 2646 |
| MaeII | ACGT | 5 cut(s) | 30, 1717, 2017, 2548, 2616 |
| MaeIII | GTNAC | 1 cut(s) | 1916 |
| MflI | RGATCY | 6 cut(s) | 66, 448, 1451, 1474, 1762, 2082 |
| MhlI | GDGCHC | 2 cut(s) | 88, 462 |
| MlyI | GAGTC | 4 cut(s) | 488, 2147, 2567, 2680 |
| MmeI | TCCRAC | 1 cut(s) | 1047 |
| Mph1103I | ATGCAT | 2 cut(s) | 710, 1276 |
| MroI | TCCGGA | 1 cut(s) | 2365 |
| MroXI | GAANNNNTTC | 3 cut(s) | 683, 1590, 2699 |
| MseI | TTAA | 9 cut(s) | 342, 737, 920, 1062, 1497, 1685, 2064, 2193, 2519 |
| MslI | CAYNNNNRTG | 2 cut(s) | 23, 1419 |
| MspI | CCGG | 1 cut(s) | 2366 |
| MspR9I | CCNGG | 1 cut(s) | 1973 |
| Mva1269I | GAATGC | 1 cut(s) | 2417 |
| MvaI | CCWGG | 1 cut(s) | 1973 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 53, 83, 440, 2443, 2505 |
| NdeI | CATATG | 2 cut(s) | 1416, 2330 |
| NheI | GCTAGC | 2 cut(s) | 43, 2645 |
| NlaIV | GGNNCC | 4 cut(s) | 85, 1356, 2752, 2764 |
| NmuCI | GTSAC | 1 cut(s) | 1916 |
| NsiI | ATGCAT | 2 cut(s) | 710, 1276 |
| NspI | RCATGY | 6 cut(s) | 56, 1003, 1039, 1168, 1222, 1601 |
| PaeI | GCATGC | 1 cut(s) | 1168 |
| PaeR7I | CTCGAG | 2 cut(s) | 1735, 2390 |
| PagI | TCATGA | 2 cut(s) | 1383, 1516 |
| PciI | ACATGT | 2 cut(s) | 1218, 1597 |
| PciSI | GCTCTTC | 1 cut(s) | 2690 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2196 |
| PctI | GAATGC | 1 cut(s) | 2417 |
| PdmI | GAANNNNTTC | 3 cut(s) | 683, 1590, 2699 |
| PfeI | GAWTC | 5 cut(s) | 328, 988, 1711, 1740, 2306 |
| PkrI | GCNGC | 6 cut(s) | 746, 1080, 2436, 2507, 2736, 2824 |
| PleI | GAGTC | 4 cut(s) | 488, 2146, 2567, 2680 |
| PpsI | GAGTC | 4 cut(s) | 488, 2146, 2567, 2680 |
| PscI | ACATGT | 2 cut(s) | 1218, 1597 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1600 |
| PshBI | ATTAAT | 1 cut(s) | 737 |
| Psp1406I | AACGTT | 1 cut(s) | 1717 |
| Psp6I | CCWGG | 1 cut(s) | 1971 |
| PspFI | CCCAGC | 1 cut(s) | 2825 |
| PspGI | CCWGG | 1 cut(s) | 1971 |
| PspN4I | GGNNCC | 4 cut(s) | 85, 1356, 2752, 2764 |
| PspPI | GGNCC | 2 cut(s) | 793, 2234 |
| PspXI | VCTCGAGB | 1 cut(s) | 2390 |
| PstI | CTGCAG | 1 cut(s) | 2314 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1032 |
| PsuI | RGATCY | 6 cut(s) | 66, 448, 1451, 1474, 1762, 2082 |
| RsaI | GTAC | 4 cut(s) | 14, 138, 306, 1550 |
| RsaNI | GTAC | 4 cut(s) | 13, 137, 305, 1549 |
| RseI | CAYNNNNRTG | 2 cut(s) | 23, 1419 |
| SalI | GTCGAC | 1 cut(s) | 275 |
| SapI | GCTCTTC | 1 cut(s) | 2690 |
| SaqAI | TTAA | 9 cut(s) | 342, 737, 920, 1062, 1497, 1685, 2064, 2193, 2519 |
| SatI | GCNGC | 6 cut(s) | 745, 1079, 2435, 2506, 2735, 2823 |
| Sau96I | GGNCC | 2 cut(s) | 793, 2234 |
| ScaI | AGTACT | 2 cut(s) | 138, 1550 |
| SchI | GAGTC | 4 cut(s) | 488, 2147, 2567, 2680 |
| ScrFI | CCNGG | 1 cut(s) | 1973 |
| SduI | GDGCHC | 2 cut(s) | 88, 462 |
| SexAI | ACCWGGT | 1 cut(s) | 1971 |
| SfaNI | GCATC | 5 cut(s) | 136, 459, 717, 1261, 1740 |
| SfcI | CTRYAG | 3 cut(s) | 1155, 2310, 2321 |
| Sfr274I | CTCGAG | 2 cut(s) | 1735, 2390 |
| SinI | GGWCC | 1 cut(s) | 793 |
| SlaI | CTCGAG | 2 cut(s) | 1735, 2390 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 23, 1419 |
| SmlI | CTYRAG | 7 cut(s) | 1658, 1735, 1781, 1925, 2238, 2390, 2711 |
| SmoI | CTYRAG | 7 cut(s) | 1658, 1735, 1781, 1925, 2238, 2390, 2711 |
| SpeI | ACTAGT | 2 cut(s) | 133, 385 |
| SphI | GCATGC | 1 cut(s) | 1168 |
| SsiI | CCGC | 6 cut(s) | 259, 285, 1729, 1753, 2435, 2735 |
| SspI | AATATT | 1 cut(s) | 1243 |
| SspMI | CTAG | 9 cut(s) | 44, 134, 386, 453, 1449, 1511, 1575, 1760, 2646 |
| StyD4I | CCNGG | 1 cut(s) | 1971 |
| StyI | CCWWGG | 2 cut(s) | 72, 2291 |
| TaaI | ACNGT | 8 cut(s) | 414, 1156, 1296, 1343, 1440, 1558, 2112, 2665 |
| TaiI | ACGT | 5 cut(s) | 33, 1720, 2020, 2551, 2619 |
| TatI | WGTACW | 2 cut(s) | 136, 1548 |
| TauI | GCSGC | 2 cut(s) | 2437, 2737 |
| TfiI | GAWTC | 5 cut(s) | 328, 988, 1711, 1740, 2306 |
| Tru1I | TTAA | 9 cut(s) | 342, 737, 920, 1062, 1497, 1685, 2064, 2193, 2519 |
| Tru9I | TTAA | 9 cut(s) | 342, 737, 920, 1062, 1497, 1685, 2064, 2193, 2519 |
| TscAI | CASTG | 5 cut(s) | 30, 577, 1348, 1539, 1774 |
| TseFI | GTSAC | 1 cut(s) | 1916 |
| TseI | GCWGC | 4 cut(s) | 744, 1078, 2505, 2822 |
| Tsp45I | GTSAC | 1 cut(s) | 1916 |
| TspGWI | ACGGA | 1 cut(s) | 506 |
| TspRI | CASTG | 5 cut(s) | 30, 577, 1348, 1539, 1774 |
| VpaK11BI | GGWCC | 1 cut(s) | 793 |
| VspI | ATTAAT | 1 cut(s) | 737 |
| XapI | RAATTY | 3 cut(s) | 169, 682, 1888 |
| XbaI | TCTAGA | 1 cut(s) | 1448 |
| XceI | RCATGY | 6 cut(s) | 56, 1003, 1039, 1168, 1222, 1601 |
| XhoI | CTCGAG | 2 cut(s) | 1735, 2390 |
| XmiI | GTMKAC | 3 cut(s) | 276, 996, 2660 |
| XmnI | GAANNNNTTC | 3 cut(s) | 683, 1590, 2699 |
| XspI | CTAG | 9 cut(s) | 44, 134, 386, 453, 1449, 1511, 1575, 1760, 2646 |
| ZraI | GACGTC | 1 cut(s) | 2018 |
| ZrmI | AGTACT | 2 cut(s) | 138, 1550 |
| Zsp2I | ATGCAT | 2 cut(s) | 710, 1276 |