Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 93 | 4.2e-18 | Rx N-terminal domain |
| NB-ARC | PF00931 | 177 - 356 | 2.4e-31 | NB-ARC domain |
| WHD_DRP | PF23559 | 439 - 509 | 6.7e-17 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 570 - 770 | 2.5e-27 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 583 - 740 | 1.7e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
| LRR_R13L1-DRL21 | PF25019 | 746 - 804 | 4.7e-06 | R13L1/DRL21 LRRs |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 953 |
| Acc36I | ACCTGC | 1 cut(s) | 1258 |
| AccB1I | GGYRCC | 1 cut(s) | 83 |
| AccI | GTMKAC | 1 cut(s) | 276 |
| AccII | CGCG | 2 cut(s) | 2434, 2624 |
| AccIII | TCCGGA | 1 cut(s) | 2362 |
| AciI | CCGC | 5 cut(s) | 1081, 1756, 2172, 2432, 2638 |
| AclI | AACGTT | 1 cut(s) | 1717 |
| AclWI | GGATC | 5 cut(s) | 164, 443, 801, 2080, 2627 |
| AcoI | YGGCCR | 1 cut(s) | 2607 |
| AcsI | RAATTY | 3 cut(s) | 682, 837, 1891 |
| AcuI | CTGAAG | 2 cut(s) | 465, 2195 |
| AcyI | GRCGYC | 3 cut(s) | 84, 2020, 2653 |
| AfaI | GTAC | 5 cut(s) | 306, 659, 1550, 2110, 2627 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 78, 615, 1975, 2616, 2643 |
| AflIII | ACRYGT | 2 cut(s) | 1218, 1597 |
| AhlI | ACTAGT | 2 cut(s) | 133, 385 |
| AjiI | CACGTC | 1 cut(s) | 2546 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 231, 263 |
| AluBI | AGCT | 9 cut(s) | 42, 47, 97, 106, 443, 1266, 1885, 2209, 2502 |
| AluI | AGCT | 9 cut(s) | 42, 47, 97, 106, 443, 1266, 1885, 2209, 2502 |
| Alw21I | GWGCWC | 4 cut(s) | 99, 141, 474, 1372 |
| Alw26I | GTCTC | 5 cut(s) | 349, 403, 683, 715, 1463 |
| Alw44I | GTGCAC | 1 cut(s) | 470 |
| AlwI | GGATC | 5 cut(s) | 164, 443, 801, 2080, 2627 |
| Ama87I | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| Aor13HI | TCCGGA | 1 cut(s) | 2362 |
| AoxI | GGCC | 3 cut(s) | 1899, 1905, 2607 |
| ApaLI | GTGCAC | 1 cut(s) | 470 |
| ApeKI | GCWGC | 5 cut(s) | 15, 758, 1078, 1885, 2502 |
| ApoI | RAATTY | 3 cut(s) | 682, 837, 1891 |
| AseI | ATTAAT | 2 cut(s) | 737, 753 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1590, 2375 |
| AspLEI | GCGC | 3 cut(s) | 86, 460, 932 |
| AspS9I | GGNCC | 3 cut(s) | 767, 1906, 2234 |
| AsuHPI | GGTGA | 5 cut(s) | 91, 1990, 2017, 2534, 2563 |
| AvaI | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| AvaII | GGWCC | 2 cut(s) | 767, 2234 |
| BaeGI | GKGCMC | 1 cut(s) | 474 |
| BanI | GGYRCC | 1 cut(s) | 83 |
| BanII | GRGCYC | 1 cut(s) | 99 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 31, 63 |
| BauI | CACGAG | 1 cut(s) | 453 |
| BbsI | GAAGAC | 2 cut(s) | 1733, 2237 |
| Bbv12I | GWGCWC | 4 cut(s) | 99, 141, 474, 1372 |
| BbvI | GCAGC | 5 cut(s) | 27, 745, 1090, 1872, 2489 |
| BccI | CCATC | 3 cut(s) | 318, 1188, 2533 |
| BceAI | ACGGC | 2 cut(s) | 2370, 2640 |
| BciVI | GTATCC | 1 cut(s) | 1370 |
| BclI | TGATCA | 1 cut(s) | 1959 |
| BcoDI | GTCTC | 5 cut(s) | 349, 403, 683, 715, 1463 |
| BcuI | ACTAGT | 2 cut(s) | 133, 385 |
| BfaI | CTAG | 9 cut(s) | 134, 332, 386, 1449, 1511, 1575, 1692, 1763, 2124 |
| BfmI | CTRYAG | 3 cut(s) | 1155, 2307, 2318 |
| BfoI | RGCGCY | 2 cut(s) | 87, 933 |
| BfuAI | ACCTGC | 1 cut(s) | 1258 |
| BfuI | GTATCC | 1 cut(s) | 1370 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2293 |
| BglII | AGATCT | 4 cut(s) | 66, 1451, 1474, 1765 |
| BisI | GCNGC | 6 cut(s) | 16, 759, 1079, 1886, 2432, 2503 |
| BlpI | GCTNAGC | 1 cut(s) | 43 |
| BlsI | GCNGC | 6 cut(s) | 17, 760, 1080, 1887, 2433, 2504 |
| BmcAI | AGTACT | 1 cut(s) | 1550 |
| Bme18I | GGWCC | 2 cut(s) | 767, 2234 |
| BmeT110I | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| BmgBI | CACGTC | 1 cut(s) | 2546 |
| BmgT120I | GGNCC | 3 cut(s) | 767, 1906, 2234 |
| BmiI | GGNNCC | 3 cut(s) | 85, 1356, 1955 |
| BmsI | GCATC | 4 cut(s) | 136, 565, 1261, 1743 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1600 |
| BpiI | GAAGAC | 2 cut(s) | 1733, 2237 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 43 |
| BpuEI | CTTGAG | 7 cut(s) | 113, 446, 1643, 1805, 1858, 1949, 2223 |
| BsaHI | GRCGYC | 3 cut(s) | 84, 2020, 2653 |
| BsaJI | CCNNGG | 4 cut(s) | 72, 1902, 1909, 2291 |
| BsaWI | WCCGGW | 1 cut(s) | 2362 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1067, 1097 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 78, 615, 1975, 2616, 2643 |
| Bse118I | RCCGGY | 1 cut(s) | 2643 |
| Bse1I | ACTGG | 2 cut(s) | 246, 2118 |
| Bse3DI | GCAATG | 3 cut(s) | 18, 1274, 2443 |
| BseAI | TCCGGA | 1 cut(s) | 2362 |
| BseDI | CCNNGG | 4 cut(s) | 72, 1902, 1909, 2291 |
| BseGI | GGATG | 6 cut(s) | 151, 492, 787, 1047, 1216, 2060 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 78, 615, 1975, 2616, 2643 |
| BseMI | GCAATG | 3 cut(s) | 18, 1274, 2443 |
| BseMII | CTCAG | 2 cut(s) | 726, 2445 |
| BseNI | ACTGG | 2 cut(s) | 246, 2118 |
| BseRI | GAGGAG | 7 cut(s) | 602, 1083, 1088, 1146, 1802, 1946, 2540 |
| BseSI | GKGCMC | 1 cut(s) | 474 |
| BseXI | GCAGC | 5 cut(s) | 27, 745, 1090, 1872, 2489 |
| BsgI | GTGCAG | 1 cut(s) | 1236 |
| Bsh1236I | CGCG | 2 cut(s) | 2434, 2624 |
| BshFI | GGCC | 3 cut(s) | 1901, 1907, 2609 |
| BshNI | GGYRCC | 1 cut(s) | 83 |
| BsiHKAI | GWGCWC | 4 cut(s) | 99, 141, 474, 1372 |
| BsiHKCI | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| BsiSI | CCGG | 2 cut(s) | 2363, 2644 |
| BslFI | GGGAC | 2 cut(s) | 975, 1554 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 78, 615, 1975, 2616, 2643 |
| BsmAI | GTCTC | 5 cut(s) | 349, 403, 683, 715, 1463 |
| BsmBI | CGTCTC | 1 cut(s) | 715 |
| BsmFI | GGGAC | 2 cut(s) | 975, 1554 |
| BsmI | GAATGC | 3 cut(s) | 1003, 2147, 2414 |
| BsnI | GGCC | 3 cut(s) | 1901, 1907, 2609 |
| BsoBI | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| Bsp1286I | GDGCHC | 4 cut(s) | 99, 141, 474, 1372 |
| Bsp13I | TCCGGA | 1 cut(s) | 2362 |
| Bsp1407I | TGTACA | 1 cut(s) | 657 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 43 |
| BspACI | CCGC | 5 cut(s) | 1081, 1756, 2172, 2432, 2638 |
| BspANI | GGCC | 3 cut(s) | 1901, 1907, 2609 |
| BspCNI | CTCAG | 2 cut(s) | 725, 2446 |
| BspEI | TCCGGA | 1 cut(s) | 2362 |
| BspFNI | CGCG | 2 cut(s) | 2434, 2624 |
| BspHI | TCATGA | 2 cut(s) | 214, 1516 |
| BspLI | GGNNCC | 3 cut(s) | 85, 1356, 1955 |
| BspMAI | CTGCAG | 1 cut(s) | 2311 |
| BspMI | ACCTGC | 1 cut(s) | 1258 |
| BspPI | GGATC | 5 cut(s) | 164, 443, 801, 2080, 2627 |
| BspT107I | GGYRCC | 1 cut(s) | 83 |
| BsrDI | GCAATG | 3 cut(s) | 18, 1274, 2443 |
| BsrFI | RCCGGY | 1 cut(s) | 2643 |
| BsrGI | TGTACA | 1 cut(s) | 657 |
| BsrI | ACTGG | 2 cut(s) | 246, 2118 |
| BssAI | RCCGGY | 1 cut(s) | 2643 |
| BssECI | CCNNGG | 4 cut(s) | 72, 1902, 1909, 2291 |
| BssNI | GRCGYC | 3 cut(s) | 84, 2020, 2653 |
| BssSI | CACGAG | 1 cut(s) | 453 |
| BssT1I | CCWWGG | 4 cut(s) | 72, 1902, 1909, 2291 |
| Bst2BI | CACGAG | 1 cut(s) | 453 |
| Bst4CI | ACNGT | 7 cut(s) | 414, 1156, 1296, 1343, 1440, 1558, 2615 |
| Bst6I | CTCTTC | 2 cut(s) | 520, 2076 |
| BstACI | GRCGYC | 3 cut(s) | 84, 2020, 2653 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2502 |
| BstAUI | TGTACA | 1 cut(s) | 657 |
| BstC8I | GCNNGC | 3 cut(s) | 13, 1166, 2147 |
| BstDEI | CTNAG | 5 cut(s) | 43, 232, 712, 824, 2454 |
| BstF5I | GGATG | 6 cut(s) | 151, 492, 787, 1047, 1216, 2060 |
| BstFNI | CGCG | 2 cut(s) | 2434, 2624 |
| BstH2I | RGCGCY | 2 cut(s) | 87, 933 |
| BstHHI | GCGC | 3 cut(s) | 86, 460, 932 |
| BstMAI | GTCTC | 5 cut(s) | 349, 403, 683, 715, 1463 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 53, 83, 103, 2180, 2293, 2440, 2502 |
| BstNSI | RCATGY | 8 cut(s) | 56, 1003, 1168, 1222, 1392, 1601, 1734, 2183 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1600 |
| BstSFI | CTRYAG | 3 cut(s) | 1155, 2307, 2318 |
| BstSLI | GKGCMC | 1 cut(s) | 474 |
| BstUI | CGCG | 2 cut(s) | 2434, 2624 |
| BstV1I | GCAGC | 5 cut(s) | 27, 745, 1090, 1872, 2489 |
| BstV2I | GAAGAC | 2 cut(s) | 1733, 2237 |
| BstX2I | RGATCY | 8 cut(s) | 66, 169, 448, 793, 1451, 1474, 1765, 2085 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2422 |
| BstYI | RGATCY | 8 cut(s) | 66, 169, 448, 793, 1451, 1474, 1765, 2085 |
| BsuI | GTATCC | 1 cut(s) | 1370 |
| BsuRI | GGCC | 3 cut(s) | 1901, 1907, 2609 |
| BtrI | CACGTC | 1 cut(s) | 2546 |
| BtsCI | GGATG | 6 cut(s) | 151, 492, 787, 1047, 1216, 2060 |
| BtsIMutI | CAGTG | 4 cut(s) | 570, 1348, 1554, 2111 |
| BveI | ACCTGC | 1 cut(s) | 1258 |
| Cac8I | GCNNGC | 3 cut(s) | 13, 1166, 2147 |
| CciI | TCATGA | 2 cut(s) | 214, 1516 |
| CfoI | GCGC | 3 cut(s) | 86, 460, 932 |
| Cfr10I | RCCGGY | 1 cut(s) | 2643 |
| Cfr13I | GGNCC | 3 cut(s) | 767, 1906, 2234 |
| CseI | GACGC | 3 cut(s) | 697, 1931, 2028 |
| Csp6I | GTAC | 5 cut(s) | 305, 658, 1549, 2109, 2626 |
| CspCI | CAANNNNNGTGG | 6 cut(s) | 1013, 1048, 1269, 1304, 1515, 1550 |
| CviQI | GTAC | 5 cut(s) | 305, 658, 1549, 2109, 2626 |
| DdeI | CTNAG | 5 cut(s) | 43, 232, 712, 824, 2454 |
| DinI | GGCGCC | 1 cut(s) | 85 |
| DraI | TTTAAA | 3 cut(s) | 909, 1063, 1498 |
| EaeI | YGGCCR | 1 cut(s) | 2607 |
| Eam1104I | CTCTTC | 2 cut(s) | 520, 2076 |
| EarI | CTCTTC | 2 cut(s) | 520, 2076 |
| Ecl136II | GAGCTC | 1 cut(s) | 97 |
| Eco130I | CCWWGG | 4 cut(s) | 72, 1902, 1909, 2291 |
| Eco147I | AGGCCT | 1 cut(s) | 1901 |
| Eco24I | GRGCYC | 1 cut(s) | 99 |
| Eco32I | GATATC | 1 cut(s) | 859 |
| Eco47I | GGWCC | 2 cut(s) | 767, 2234 |
| Eco53kI | GAGCTC | 1 cut(s) | 97 |
| Eco57I | CTGAAG | 2 cut(s) | 465, 2195 |
| Eco88I | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| EcoICRI | GAGCTC | 1 cut(s) | 97 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2234 |
| EcoRV | GATATC | 1 cut(s) | 859 |
| EcoT14I | CCWWGG | 4 cut(s) | 72, 1902, 1909, 2291 |
| EcoT22I | ATGCAT | 3 cut(s) | 1005, 1276, 1736 |
| EcoT38I | GRGCYC | 1 cut(s) | 99 |
| EgeI | GGCGCC | 1 cut(s) | 85 |
| EheI | GGCGCC | 1 cut(s) | 85 |
| ErhI | CCWWGG | 4 cut(s) | 72, 1902, 1909, 2291 |
| Esp3I | CGTCTC | 1 cut(s) | 715 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 545, 577, 807, 839 |
| FaqI | GGGAC | 2 cut(s) | 975, 1554 |
| FauI | CCCGC | 2 cut(s) | 1749, 2645 |
| FbaI | TGATCA | 1 cut(s) | 1959 |
| FblI | GTMKAC | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 6 cut(s) | 16, 759, 1079, 1886, 2432, 2503 |
| FokI | GGATG | 6 cut(s) | 158, 499, 794, 1034, 1223, 2067 |
| FriOI | GRGCYC | 1 cut(s) | 99 |
| Fsp4HI | GCNGC | 6 cut(s) | 16, 759, 1079, 1886, 2432, 2503 |
| FspBI | CTAG | 9 cut(s) | 134, 332, 386, 1449, 1511, 1575, 1692, 1763, 2124 |
| GlaI | GCGC | 3 cut(s) | 85, 459, 931 |
| GluI | GCNGC | 6 cut(s) | 16, 759, 1079, 1886, 2432, 2503 |
| HaeII | RGCGCY | 2 cut(s) | 87, 933 |
| HaeIII | GGCC | 3 cut(s) | 1901, 1907, 2609 |
| HapII | CCGG | 2 cut(s) | 2363, 2644 |
| HgaI | GACGC | 3 cut(s) | 697, 1931, 2028 |
| HhaI | GCGC | 3 cut(s) | 86, 460, 932 |
| Hin1I | GRCGYC | 3 cut(s) | 84, 2020, 2653 |
| Hin6I | GCGC | 3 cut(s) | 84, 458, 930 |
| HinP1I | GCGC | 3 cut(s) | 84, 458, 930 |
| HincII | GTYRAC | 3 cut(s) | 277, 391, 1715 |
| HindII | GTYRAC | 3 cut(s) | 277, 391, 1715 |
| HindIII | AAGCTT | 1 cut(s) | 2207 |
| HinfI | GANTC | 8 cut(s) | 328, 866, 872, 988, 1711, 1743, 2303, 2570 |
| HpaII | CCGG | 2 cut(s) | 2363, 2644 |
| HphI | GGTGA | 5 cut(s) | 91, 1990, 2017, 2534, 2563 |
| Hpy166II | GTNNAC | 7 cut(s) | 277, 391, 472, 658, 1313, 1715, 2111 |
| Hpy188I | TCNGA | 5 cut(s) | 715, 871, 1970, 2338, 2575 |
| Hpy8I | GTNNAC | 7 cut(s) | 277, 391, 472, 658, 1313, 1715, 2111 |
| Hpy99I | CGWCG | 5 cut(s) | 2198, 2570, 2615, 2652, 2655 |
| HpyAV | CCTTC | 3 cut(s) | 2114, 2225, 2471 |
| HpyCH4III | ACNGT | 7 cut(s) | 414, 1156, 1296, 1343, 1440, 1558, 2615 |
| HpyCH4IV | ACGT | 4 cut(s) | 30, 1717, 1997, 2545 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 53, 83, 103, 2180, 2293, 2440, 2502 |
| HpyF3I | CTNAG | 5 cut(s) | 43, 232, 712, 824, 2454 |
| HpySE526I | ACGT | 4 cut(s) | 30, 1717, 1997, 2545 |
| Hsp92I | GRCGYC | 3 cut(s) | 84, 2020, 2653 |
| HspAI | GCGC | 3 cut(s) | 84, 458, 930 |
| KasI | GGCGCC | 1 cut(s) | 83 |
| Kpn2I | TCCGGA | 1 cut(s) | 2362 |
| Ksp22I | TGATCA | 1 cut(s) | 1959 |
| LmnI | GCTCC | 2 cut(s) | 1075, 1161 |
| Lsp1109I | GCAGC | 5 cut(s) | 27, 745, 1090, 1872, 2489 |
| LweI | GCATC | 4 cut(s) | 136, 565, 1261, 1743 |
| MaeI | CTAG | 9 cut(s) | 134, 332, 386, 1449, 1511, 1575, 1692, 1763, 2124 |
| MaeII | ACGT | 4 cut(s) | 30, 1717, 1997, 2545 |
| MaeIII | GTNAC | 3 cut(s) | 883, 1791, 1919 |
| MfeI | CAATTG | 1 cut(s) | 888 |
| MflI | RGATCY | 8 cut(s) | 66, 169, 448, 793, 1451, 1474, 1765, 2085 |
| MhlI | GDGCHC | 4 cut(s) | 99, 141, 474, 1372 |
| Mly113I | GGCGCC | 1 cut(s) | 84 |
| MlyI | GAGTC | 4 cut(s) | 881, 997, 1720, 2564 |
| MmeI | TCCRAC | 1 cut(s) | 831 |
| Mph1103I | ATGCAT | 3 cut(s) | 1005, 1276, 1736 |
| MroI | TCCGGA | 1 cut(s) | 2362 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1590, 2375 |
| MspA1I | CMGCKG | 1 cut(s) | 1081 |
| MspI | CCGG | 2 cut(s) | 2363, 2644 |
| MunI | CAATTG | 1 cut(s) | 888 |
| Mva1269I | GAATGC | 3 cut(s) | 1003, 2147, 2414 |
| MvnI | CGCG | 2 cut(s) | 2434, 2624 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 53, 83, 103, 2180, 2293, 2440, 2502 |
| NarI | GGCGCC | 1 cut(s) | 84 |
| NlaIV | GGNNCC | 3 cut(s) | 85, 1356, 1955 |
| NmuCI | GTSAC | 1 cut(s) | 1919 |
| NsiI | ATGCAT | 3 cut(s) | 1005, 1276, 1736 |
| NspI | RCATGY | 8 cut(s) | 56, 1003, 1168, 1222, 1392, 1601, 1734, 2183 |
| PaeI | GCATGC | 1 cut(s) | 1168 |
| PaeR7I | CTCGAG | 3 cut(s) | 140, 1738, 2387 |
| PagI | TCATGA | 2 cut(s) | 214, 1516 |
| PceI | AGGCCT | 1 cut(s) | 1901 |
| PciI | ACATGT | 2 cut(s) | 1218, 1597 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 2003, 2199 |
| PctI | GAATGC | 3 cut(s) | 1003, 2147, 2414 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1590, 2375 |
| PfeI | GAWTC | 4 cut(s) | 328, 866, 1743, 2303 |
| PkrI | GCNGC | 6 cut(s) | 17, 760, 1080, 1887, 2433, 2504 |
| PleI | GAGTC | 4 cut(s) | 880, 996, 1719, 2564 |
| PluTI | GGCGCC | 1 cut(s) | 87 |
| PpsI | GAGTC | 4 cut(s) | 880, 996, 1719, 2564 |
| PpuMI | RGGWCCY | 1 cut(s) | 2234 |
| PscI | ACATGT | 2 cut(s) | 1218, 1597 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1600 |
| PshBI | ATTAAT | 2 cut(s) | 737, 753 |
| PsiI | TTATAA | 1 cut(s) | 953 |
| Psp124BI | GAGCTC | 1 cut(s) | 99 |
| Psp1406I | AACGTT | 1 cut(s) | 1717 |
| Psp5II | RGGWCCY | 1 cut(s) | 2234 |
| PspN4I | GGNNCC | 3 cut(s) | 85, 1356, 1955 |
| PspPI | GGNCC | 3 cut(s) | 767, 1906, 2234 |
| PspPPI | RGGWCCY | 1 cut(s) | 2234 |
| PspXI | VCTCGAGB | 2 cut(s) | 140, 2387 |
| PstI | CTGCAG | 1 cut(s) | 2311 |
| PsuI | RGATCY | 8 cut(s) | 66, 169, 448, 793, 1451, 1474, 1765, 2085 |
| RsaI | GTAC | 5 cut(s) | 306, 659, 1550, 2110, 2627 |
| RsaNI | GTAC | 5 cut(s) | 305, 658, 1549, 2109, 2626 |
| SacI | GAGCTC | 1 cut(s) | 99 |
| SalI | GTCGAC | 1 cut(s) | 275 |
| SatI | GCNGC | 6 cut(s) | 16, 759, 1079, 1886, 2432, 2503 |
| Sau96I | GGNCC | 3 cut(s) | 767, 1906, 2234 |
| ScaI | AGTACT | 1 cut(s) | 1550 |
| SchI | GAGTC | 4 cut(s) | 881, 997, 1720, 2564 |
| SduI | GDGCHC | 4 cut(s) | 99, 141, 474, 1372 |
| SfaNI | GCATC | 4 cut(s) | 136, 565, 1261, 1743 |
| SfcI | CTRYAG | 3 cut(s) | 1155, 2307, 2318 |
| SfoI | GGCGCC | 1 cut(s) | 85 |
| Sfr274I | CTCGAG | 3 cut(s) | 140, 1738, 2387 |
| SgrAI | CRCCGGYG | 1 cut(s) | 2643 |
| SinI | GGWCC | 2 cut(s) | 767, 2234 |
| SlaI | CTCGAG | 3 cut(s) | 140, 1738, 2387 |
| SpeI | ACTAGT | 2 cut(s) | 133, 385 |
| SphI | GCATGC | 1 cut(s) | 1168 |
| SseBI | AGGCCT | 1 cut(s) | 1901 |
| SsiI | CCGC | 5 cut(s) | 1081, 1756, 2172, 2432, 2638 |
| SspDI | GGCGCC | 1 cut(s) | 83 |
| SspI | AATATT | 1 cut(s) | 1243 |
| SspMI | CTAG | 9 cut(s) | 134, 332, 386, 1449, 1511, 1575, 1692, 1763, 2124 |
| SstI | GAGCTC | 1 cut(s) | 99 |
| StuI | AGGCCT | 1 cut(s) | 1901 |
| StyI | CCWWGG | 4 cut(s) | 72, 1902, 1909, 2291 |
| TaaI | ACNGT | 7 cut(s) | 414, 1156, 1296, 1343, 1440, 1558, 2615 |
| TaiI | ACGT | 4 cut(s) | 33, 1720, 2000, 2548 |
| TatI | WGTACW | 2 cut(s) | 657, 1548 |
| TauI | GCSGC | 1 cut(s) | 2434 |
| TfiI | GAWTC | 4 cut(s) | 328, 866, 1743, 2303 |
| TscAI | CASTG | 4 cut(s) | 577, 1348, 1561, 2118 |
| TseFI | GTSAC | 1 cut(s) | 1919 |
| TseI | GCWGC | 5 cut(s) | 15, 758, 1078, 1885, 2502 |
| Tsp45I | GTSAC | 1 cut(s) | 1919 |
| TspRI | CASTG | 4 cut(s) | 577, 1348, 1561, 2118 |
| VneI | GTGCAC | 1 cut(s) | 470 |
| VpaK11BI | GGWCC | 2 cut(s) | 767, 2234 |
| VspI | ATTAAT | 2 cut(s) | 737, 753 |
| XapI | RAATTY | 3 cut(s) | 682, 837, 1891 |
| XbaI | TCTAGA | 2 cut(s) | 1448, 1691 |
| XceI | RCATGY | 8 cut(s) | 56, 1003, 1168, 1222, 1392, 1601, 1734, 2183 |
| XhoI | CTCGAG | 3 cut(s) | 140, 1738, 2387 |
| XmiI | GTMKAC | 1 cut(s) | 276 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1590, 2375 |
| XspI | CTAG | 9 cut(s) | 134, 332, 386, 1449, 1511, 1575, 1692, 1763, 2124 |
| ZrmI | AGTACT | 1 cut(s) | 1550 |
| Zsp2I | ATGCAT | 3 cut(s) | 1005, 1276, 1736 |