Rh7DG030600

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000159
Physical Location & Seq
Forward (+)
2271100 .. 2274127
3028 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG030600.1

Sequence Viewer

Length: 1206 bp
ATGGAATTTGCCACTAGTGTTGCAGAGAGCGTCTTGGGTAGGCTAGCCTCTTATGCTGCCCAAGAAATCTGCTTGGCATGGGGTGCCCAACTTGAGTTGCAAAAGCTCAAGGAGACCTTGTTAGACATCAAAGACTTCCTCCAGGATGCGGAGGAAAAGCAAGTGAAGAATCCTATAATCAGCCGTTGGTTAGGAGATGTCAGAGATGTTTGCAACGACGCTGAGGATGCACTGGACGAATATGAGTTCCGAAAGCTCAGACTCAAAGTGCTCATCAACGACCATTGGAGAGTCAAAAGAGAGGTACACCAATTCTTCTCCCATTGGAATCCCGTTGTGTTTAATTTCAAAATGGGTCATAAATTGAAACGCATTAGGGAGCGTCTAGTTCAAATTGATAATGATGGAAAGACAAAGTTTTCTCTCGTTCAACAAACTGAAGTTCTTCCAGCACCCTTGAGGCCAGATGGTAGTAAAAAGGAGACAGACTCTTTACTGGAAGGTCATTTCAAAATCCATGATTTAGTGCATGACTTGGCAATATCAGTGGCACGGGTAGATTGCTCCTCAATTAATTTCCGTCCCACTAGTGCTTTTGAAAAAGTCCGACACGTGTCAATATCGGAAAAAGACTTGTCTGGGGATGTGGCAGGAGTCCCGGCATTCATTCTCCAGTCGGAGAAACTGCGGACCATTCTAAATGTAGATAGTGAAGCTGGGATCTCCAATCAATATTTTCTAAAGACATGCATCTTGAGATTCAAGTATCTGCGTGCGCTAGATATGTATTTTCCGAAAGGAGTATTTAGACGCCTCACCTTACTTCAATCCTTGTTCATTGGGACTTGTGCGAATCTGAAATCTCTGGGAGAAGAGATCCAATACCTCACTAACCTTCGTCAACTGTCGATCGGTTTCTGTGGAAATCTGGAGTCCTTGCCACCTAACATGAAGAACTTGACTGCACTCCATACTTTGGGGATCGTTAATTGTAAGAAGCTTGAGTTAATGAGGTCGGGAGAAGGCATCAATGGTCTCAGATCATTCGCTGTCATCATATCAGATTTGGAGGCTTTGCCCAATTGGCTTCAAGAGTCTGCAGACACTTTACAGAGCATGCACATCTCGAAGTGTGATATAATCAAGGTGTGGATTCGAACAGTTGTAAAAAGAGCACGGGCGGCCACCAGAGGTGATTTAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

401

Amino Acids

45.64

Weight (kDa)

8.51

Isoelectric Point (pI)

42.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 8 - 96 5.9e-23 Rx N-terminal domain
LRR_14 PF23598 257 - 375 5.4e-07 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 83
AccB7I CCANNNNNTGG 1 cut(s) 976
AciI CCGC 3 cut(s) 149, 688, 1181
AclWI GGATC 3 cut(s) 728, 871, 989
AcoI YGGCCR 1 cut(s) 1182
AcsI RAATTY 1 cut(s) 5
AcuI CTGAAG 1 cut(s) 459
AcvI CACGTG 1 cut(s) 613
AcyI GRCGYC 1 cut(s) 811
AfaI GTAC 1 cut(s) 306
AfiI CCNNNNNNNGG 2 cut(s) 148, 976
AflIII ACRYGT 2 cut(s) 610, 612
AgsI TTSAA 9 cut(s) 349, 367, 392, 431, 511, 599, 763, 827, 1091
AhlI ACTAGT 2 cut(s) 14, 587
AjnI CCWGG 1 cut(s) 141
AluBI AGCT 4 cut(s) 106, 256, 716, 1000
AluI AGCT 4 cut(s) 106, 256, 716, 1000
Alw21I GWGCWC 2 cut(s) 273, 1177
Alw26I GTCTC 3 cut(s) 107, 476, 1040
AlwI GGATC 3 cut(s) 728, 871, 989
AoxI GGCC 2 cut(s) 461, 1182
ApeKI GCWGC 1 cut(s) 56
ApoI RAATTY 1 cut(s) 5
AseI ATTAAT 1 cut(s) 573
Asp700I GAANNNNTTC 1 cut(s) 444
AspLEI GCGC 1 cut(s) 778
AspS9I GGNCC 1 cut(s) 690
AsuC2I CCSGG 1 cut(s) 659
AsuHPI GGTGA 2 cut(s) 808, 1205
AsuII TTCGAA 1 cut(s) 1156
AsuNHI GCTAGC 1 cut(s) 43
AvaII GGWCC 1 cut(s) 690
BaeGI GKGCMC 1 cut(s) 88
BanI GGYRCC 1 cut(s) 83
BbrPI CACGTG 1 cut(s) 613
Bbv12I GWGCWC 2 cut(s) 273, 1177
BbvCI CCTCAGC 1 cut(s) 222
BbvI GCAGC 1 cut(s) 43
BccI CCATC 2 cut(s) 398, 461
BceAI ACGGC 1 cut(s) 168
BciT130I CCWGG 1 cut(s) 143
BcnI CCSGG 1 cut(s) 659
BcoDI GTCTC 3 cut(s) 107, 476, 1040
BcuI ACTAGT 2 cut(s) 14, 587
BfaI CTAG 5 cut(s) 15, 44, 386, 588, 779
BfmI CTRYAG 1 cut(s) 1098
BglI GCCNNNNNGGC 1 cut(s) 1084
BisI GCNGC 2 cut(s) 57, 1182
BlsI GCNGC 2 cut(s) 58, 1183
Bme1390I CCNGG 2 cut(s) 143, 659
Bme18I GGWCC 1 cut(s) 690
BmgT120I GGNCC 1 cut(s) 690
BmiI GGNNCC 1 cut(s) 85
BmrFI CCNGG 2 cut(s) 143, 659
BmsI GCATC 4 cut(s) 136, 217, 759, 1035
BmtI GCTAGC 1 cut(s) 47
BoxI GACNNNNGTC 1 cut(s) 613
BplI GAGNNNNNCTC 2 cut(s) 473, 505
BpmI CTGGAG 3 cut(s) 125, 656, 950
Bpu10I CCTNAGC 1 cut(s) 222
Bpu14I TTCGAA 1 cut(s) 1156
BpuEI CTTGAG 5 cut(s) 92, 113, 478, 775, 1022
BpuMI CCSGG 1 cut(s) 659
BsaAI YACGTR 1 cut(s) 613
BsaHI GRCGYC 1 cut(s) 811
BsaI GGTCTC 2 cut(s) 107, 1040
BsaXI ACNNNNNCTCC 2 cut(s) 104, 134
Bsc4I CCNNNNNNNGG 2 cut(s) 148, 976
Bse1I ACTGG 3 cut(s) 237, 501, 673
BseBI CCWGG 1 cut(s) 143
BseGI GGATG 3 cut(s) 151, 232, 649
BseLI CCNNNNNNNGG 2 cut(s) 148, 976
BseMII CTCAG 3 cut(s) 213, 271, 1051
BseNI ACTGG 3 cut(s) 237, 501, 673
BseRI GAGGAG 1 cut(s) 556
BseSI GKGCMC 1 cut(s) 88
BseXI GCAGC 1 cut(s) 43
BseYI CCCAGC 1 cut(s) 716
BsgI GTGCAG 1 cut(s) 948
Bsh1285I CGRYCG 1 cut(s) 912
BshFI GGCC 2 cut(s) 463, 1184
BshNI GGYRCC 1 cut(s) 83
BsiEI CGRYCG 1 cut(s) 912
BsiHKAI GWGCWC 2 cut(s) 273, 1177
BsiSI CCGG 1 cut(s) 659
BslFI GGGAC 3 cut(s) 567, 641, 856
BslI CCNNNNNNNGG 2 cut(s) 148, 976
BsmAI GTCTC 3 cut(s) 107, 476, 1040
BsmFI GGGAC 3 cut(s) 567, 641, 856
BsmI GAATGC 1 cut(s) 662
BsnI GGCC 2 cut(s) 463, 1184
Bso31I GGTCTC 2 cut(s) 107, 1040
Bsp119I TTCGAA 1 cut(s) 1156
Bsp1286I GDGCHC 3 cut(s) 88, 273, 1177
Bsp143I GATC 5 cut(s) 720, 876, 909, 981, 1040
BspACI CCGC 3 cut(s) 149, 688, 1181
BspANI GGCC 2 cut(s) 463, 1184
BspCNI CTCAG 3 cut(s) 214, 270, 1050
BspLI GGNNCC 1 cut(s) 85
BspMAI CTGCAG 1 cut(s) 1102
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 3 cut(s) 728, 871, 989
BspT104I TTCGAA 1 cut(s) 1156
BspT107I GGYRCC 1 cut(s) 83
BspTNI GGTCTC 2 cut(s) 107, 1040
BsrI ACTGG 3 cut(s) 237, 501, 673
BssMI GATC 5 cut(s) 720, 876, 909, 981, 1040
BssNI GRCGYC 1 cut(s) 811
Bst2UI CCWGG 1 cut(s) 143
Bst4CI ACNGT 2 cut(s) 906, 1162
Bst6I CTCTTC 1 cut(s) 867
BstACI GRCGYC 1 cut(s) 811
BstAPI GCANNNNNTGC 1 cut(s) 83
BstBAI YACGTR 1 cut(s) 613
BstBI TTCGAA 1 cut(s) 1156
BstC8I GCNNGC 3 cut(s) 45, 774, 1118
BstDEI CTNAG 3 cut(s) 222, 257, 1037
BstF5I GGATG 3 cut(s) 151, 232, 649
BstHHI GCGC 1 cut(s) 778
BstKTI GATC 5 cut(s) 723, 879, 912, 984, 1043
BstMAI GTCTC 3 cut(s) 107, 476, 1040
BstMBI GATC 5 cut(s) 720, 876, 909, 981, 1040
BstMCI CGRYCG 1 cut(s) 912
BstMWI GCNNNNNNNGC 5 cut(s) 53, 83, 227, 1084, 1181
BstNI CCWGG 1 cut(s) 143
BstNSI RCATGY 2 cut(s) 750, 1120
BstPAI GACNNNNGTC 1 cut(s) 613
BstSCI CCNGG 2 cut(s) 141, 657
BstSFI CTRYAG 1 cut(s) 1098
BstSLI GKGCMC 1 cut(s) 88
BstV1I GCAGC 1 cut(s) 43
BstX2I RGATCY 2 cut(s) 720, 876
BstYI RGATCY 2 cut(s) 720, 876
BsuRI GGCC 2 cut(s) 463, 1184
BtsCI GGATG 3 cut(s) 151, 232, 649
BtsIMutI CAGTG 2 cut(s) 230, 552
Cac8I GCNNGC 3 cut(s) 45, 774, 1118
CfoI GCGC 1 cut(s) 778
Cfr13I GGNCC 1 cut(s) 690
CseI GACGC 4 cut(s) 19, 227, 371, 819
Csp6I GTAC 1 cut(s) 305
CspCI CAANNNNNGTGG 3 cut(s) 36, 528, 563
CviAII CATG 6 cut(s) 78, 518, 530, 747, 949, 1117
CviQI GTAC 1 cut(s) 305
DdeI CTNAG 3 cut(s) 222, 257, 1037
DpnI GATC 5 cut(s) 722, 878, 911, 983, 1042
DpnII GATC 5 cut(s) 720, 876, 909, 981, 1040
EaeI YGGCCR 1 cut(s) 1182
Eam1104I CTCTTC 1 cut(s) 867
EarI CTCTTC 1 cut(s) 867
Eco31I GGTCTC 2 cut(s) 107, 1040
Eco47I GGWCC 1 cut(s) 690
Eco57I CTGAAG 1 cut(s) 459
Eco72I CACGTG 1 cut(s) 613
EcoRII CCWGG 1 cut(s) 141
EcoT22I ATGCAT 1 cut(s) 752
FaeI CATG 6 cut(s) 81, 521, 533, 750, 952, 1120
FalI AAGNNNNNCTT 2 cut(s) 101, 133
FaqI GGGAC 3 cut(s) 567, 641, 856
FatI CATG 6 cut(s) 77, 517, 529, 746, 948, 1116
Fnu4HI GCNGC 2 cut(s) 57, 1182
FokI GGATG 3 cut(s) 158, 239, 656
Fsp4HI GCNGC 2 cut(s) 57, 1182
FspBI CTAG 5 cut(s) 15, 44, 386, 588, 779
GlaI GCGC 1 cut(s) 777
GluI GCNGC 2 cut(s) 57, 1182
GsaI CCCAGC 1 cut(s) 720
GsuI CTGGAG 3 cut(s) 125, 656, 950
HaeIII GGCC 2 cut(s) 463, 1184
HapII CCGG 1 cut(s) 659
HgaI GACGC 4 cut(s) 19, 227, 371, 819
HhaI GCGC 1 cut(s) 778
Hin1I GRCGYC 1 cut(s) 811
Hin1II CATG 6 cut(s) 81, 521, 533, 750, 952, 1120
Hin6I GCGC 1 cut(s) 776
HinP1I GCGC 1 cut(s) 776
HincII GTYRAC 1 cut(s) 902
HindII GTYRAC 1 cut(s) 902
HindIII AAGCTT 1 cut(s) 998
HpaII CCGG 1 cut(s) 659
HphI GGTGA 2 cut(s) 808, 1205
Hpy166II GTNNAC 2 cut(s) 307, 902
Hpy188III TCNNGA 5 cut(s) 754, 929, 1017, 1091, 1126
Hpy8I GTNNAC 2 cut(s) 307, 902
Hpy99I CGWCG 1 cut(s) 221
HpyAV CCTTC 3 cut(s) 494, 905, 1016
HpyCH4III ACNGT 2 cut(s) 906, 1162
HpyCH4IV ACGT 1 cut(s) 612
HpyCH4V TGCA 9 cut(s) 23, 100, 213, 230, 529, 750, 965, 1100, 1120
HpyF10VI GCNNNNNNNGC 5 cut(s) 53, 83, 227, 1084, 1181
HpyF3I CTNAG 3 cut(s) 222, 257, 1037
HpySE526I ACGT 1 cut(s) 612
Hsp92I GRCGYC 1 cut(s) 811
Hsp92II CATG 6 cut(s) 81, 521, 533, 750, 952, 1120
HspAI GCGC 1 cut(s) 776
Kzo9I GATC 5 cut(s) 720, 876, 909, 981, 1040
LmnI GCTCC 2 cut(s) 379, 569
Lsp1109I GCAGC 1 cut(s) 43
LweI GCATC 4 cut(s) 136, 217, 759, 1035
MaeI CTAG 5 cut(s) 15, 44, 386, 588, 779
MaeII ACGT 1 cut(s) 612
MalI GATC 5 cut(s) 722, 878, 911, 983, 1042
MboI GATC 5 cut(s) 720, 876, 909, 981, 1040
MboII GAAGA 5 cut(s) 178, 307, 437, 884, 964
MfeI CAATTG 1 cut(s) 1081
MflI RGATCY 2 cut(s) 720, 876
MhlI GDGCHC 3 cut(s) 88, 273, 1177
MluCI AATT 9 cut(s) 5, 311, 343, 362, 393, 570, 574, 988, 1081
MlyI GAGTC 6 cut(s) 255, 300, 482, 663, 941, 1103
MmeI TCCRAC 2 cut(s) 631, 657
Mph1103I ATGCAT 1 cut(s) 752
MroXI GAANNNNTTC 1 cut(s) 444
MseI TTAA 4 cut(s) 342, 573, 987, 1007
MspI CCGG 1 cut(s) 659
MspR9I CCNGG 2 cut(s) 143, 659
MunI CAATTG 1 cut(s) 1081
Mva1269I GAATGC 1 cut(s) 662
MvaI CCWGG 1 cut(s) 143
MwoI GCNNNNNNNGC 5 cut(s) 53, 83, 227, 1084, 1181
NciI CCSGG 1 cut(s) 659
NdeII GATC 5 cut(s) 720, 876, 909, 981, 1040
NheI GCTAGC 1 cut(s) 43
NlaIII CATG 6 cut(s) 81, 521, 533, 750, 952, 1120
NlaIV GGNNCC 1 cut(s) 85
NsiI ATGCAT 1 cut(s) 752
NspI RCATGY 2 cut(s) 750, 1120
NspV TTCGAA 1 cut(s) 1156
PaeI GCATGC 1 cut(s) 1120
PctI GAATGC 1 cut(s) 662
PdmI GAANNNNTTC 1 cut(s) 444
PfeI GAWTC 5 cut(s) 169, 328, 759, 853, 1153
PflMI CCANNNNNTGG 1 cut(s) 976
PfoI TCCNGGA 1 cut(s) 141
PkrI GCNGC 2 cut(s) 58, 1183
Ple19I CGATCG 1 cut(s) 912
PleI GAGTC 6 cut(s) 255, 299, 482, 662, 940, 1102
PmaCI CACGTG 1 cut(s) 613
PmlI CACGTG 1 cut(s) 613
PpsI GAGTC 6 cut(s) 255, 299, 482, 662, 940, 1102
Ppu21I YACGTR 1 cut(s) 613
PshAI GACNNNNGTC 1 cut(s) 613
PshBI ATTAAT 1 cut(s) 573
Psp6I CCWGG 1 cut(s) 141
PspCI CACGTG 1 cut(s) 613
PspFI CCCAGC 1 cut(s) 716
PspGI CCWGG 1 cut(s) 141
PspN4I GGNNCC 1 cut(s) 85
PspPI GGNCC 1 cut(s) 690
PstI CTGCAG 1 cut(s) 1102
PsuI RGATCY 2 cut(s) 720, 876
PvuI CGATCG 1 cut(s) 912
RsaI GTAC 1 cut(s) 306
RsaNI GTAC 1 cut(s) 305
SaqAI TTAA 4 cut(s) 342, 573, 987, 1007
SatI GCNGC 2 cut(s) 57, 1182
Sau3AI GATC 5 cut(s) 720, 876, 909, 981, 1040
Sau96I GGNCC 1 cut(s) 690
SchI GAGTC 6 cut(s) 255, 300, 482, 663, 941, 1103
ScrFI CCNGG 2 cut(s) 143, 659
SduI GDGCHC 3 cut(s) 88, 273, 1177
SfaNI GCATC 4 cut(s) 136, 217, 759, 1035
SfcI CTRYAG 1 cut(s) 1098
SfuI TTCGAA 1 cut(s) 1156
SinI GGWCC 1 cut(s) 690
SmlI CTYRAG 5 cut(s) 92, 107, 457, 754, 1001
SmoI CTYRAG 5 cut(s) 92, 107, 457, 754, 1001
SpeI ACTAGT 2 cut(s) 14, 587
SphI GCATGC 1 cut(s) 1120
Sse9I AATT 9 cut(s) 5, 311, 343, 362, 393, 570, 574, 988, 1081
SsiI CCGC 3 cut(s) 149, 688, 1181
SspI AATATT 1 cut(s) 734
SspMI CTAG 5 cut(s) 15, 44, 386, 588, 779
StyD4I CCNGG 2 cut(s) 141, 657
TaaI ACNGT 2 cut(s) 906, 1162
TaiI ACGT 1 cut(s) 615
TaqI TCGA 3 cut(s) 908, 1127, 1156
TasI AATT 9 cut(s) 5, 311, 343, 362, 393, 570, 574, 988, 1081
TauI GCSGC 1 cut(s) 1184
TfiI GAWTC 5 cut(s) 169, 328, 759, 853, 1153
Tru1I TTAA 4 cut(s) 342, 573, 987, 1007
Tru9I TTAA 4 cut(s) 342, 573, 987, 1007
TscAI CASTG 2 cut(s) 237, 552
TseI GCWGC 1 cut(s) 56
TspDTI ATGAA 3 cut(s) 655, 826, 965
TspGWI ACGGA 1 cut(s) 569
TspRI CASTG 2 cut(s) 237, 552
Van91I CCANNNNNTGG 1 cut(s) 976
VpaK11BI GGWCC 1 cut(s) 690
VspI ATTAAT 1 cut(s) 573
XapI RAATTY 1 cut(s) 5
XceI RCATGY 2 cut(s) 750, 1120
XmnI GAANNNNTTC 1 cut(s) 444
XspI CTAG 5 cut(s) 15, 44, 386, 588, 779
Zsp2I ATGCAT 1 cut(s) 752
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.