Rh2CG270600

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000159
Physical Location & Seq
Forward (+)
29445434 .. 29447044
1611 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG270600.1

Sequence Viewer

Length: 1611 bp
ATGGAGTTTGCCAGCAACATTGCAGATGACGTCTTCGGTAGGCTAGCTTCACATGCTTCCCAACAGATCTCCTTGGCATGGGGTGCCCAACTTAAGCTCAGCAAGCTCAACAACACCTTATCTGCCATCAAACTAGTGCTCGAGGATGCAGAGAAGAAGCAAGTGAGAAATCCCCTAATCACTCGTTGGTTAGGAAATCTCAAAGATGTTTGTCATGACGTTGATGATGTCTTGGACGAACTGGACTTCCAAAAGTTGCGGTTGAAAGTGGAGGTCAACAATTATGGGAAGATCAAAGGAAAGGTACGCCAATTTTTTTCCCGATGGAATCCAGTAGTGTTTAACTTCAAAATGGGACATAAAGTGAAAGAGATTAGAGAAAGACTAGTTGAAATTGATAATGAAAAGAGACAGTTTGCTCTCCTTGAGTTTGCTAAGATAGCCGAAGATCATCGTGCGCCCCATCAAGTGCACGTTGACAGGAGGATGACTACCTCTAAAGTTGAGGCTTCAAATGTTATTGGAAGAGATGATGATAAAAAACAGATTATCAAGCATCTCTTGAATGACACTGATTTCTCCAGTGAGGAGAATGTTTCTGTTGTTTCCATAATTGGGTTAGGAGGATTAGGGAAAACAACACTTGCTAAATTGGTGTACAATGATAGCATGGTAGAAGAAAATTTTGAGACAAAGATGTGGATATGCGTCTCAGACAACTTTGATATTCAAACATTAATTCGAGGTATTACTAATGCTGCAAATGGACCAAAATATGAGGATGAAAGTTTGGATCTTATGGAAAGAAAATTGCAAGATACTCTTAGAGGTAAAAATTTTTTATTGGTGTTGGACGATATCTGGGATACTGAGTCAATTGGAGTAACAATTGAAAAATGGATTGATTTAAAAACTTTGTTAAATGTGGGAGCTAATGGAAGCAAAATCATTATAACAACACGAAATAAATCAGTTGCTTTACTTGTGAGTCCCTTATACATGCATTCTTTAGAATGTCTTTCCCACAAAGATTGCATGTCCTTGTTCATCCAAAGGGCATTTAAAAGAGGAGAGGAGCAGCGCTATCAACATTTGATAGAAATTGGAGAGGATATTGTGAAAAAGTGTGGAGGAGTTCCATTAGCAGTAGCTACTGTAGGGAGTATGCTCTATTTGAATACAGAGAAACACCATTGGTTGCATGTCAGAGATGATGACATGTGGAGTATAGGGAATGACAATATTTTACCTGCACTCAAATTGAGCTATGATGCACTACCACAACACTTGAAACAATGTTTTGCATTTTGTTCACTTTTCCCAAAGGATTATCAATTCAACAGTGGCTTCTTGGTTCCACTATGGATAGCACAAGGATACCTCAAAACATGTAAGAAAAATGAAGATTTTGAACATATGGGTATAGAGTATATAAGGCAGTTTTGCTCTAGATCTTTGTTTCAAGTCGAGTTTGATGTCAAAACAGCCATAGTTTTTAAAATACATGATCTAGTTCATGATTTAGCAATTTCAGTGGCACAAGTAGAGTACTCCACAGTCAATTTCCGCCCCTCTAGTGCTTTGAAAACGTTTCGACATGTGTCAATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

536

Amino Acids

61.39

Weight (kDa)

6.66

Isoelectric Point (pI)

33.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 11 - 91 9.7e-19 Rx N-terminal domain
NB-ARC PF00931 177 - 356 2.1e-33 NB-ARC domain
WHD_DRP PF23559 439 - 509 2e-19 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 953
AatII GACGTC 1 cut(s) 33
Acc36I ACCTGC 1 cut(s) 1258
AccB1I GGYRCC 1 cut(s) 83
AciI CCGC 2 cut(s) 259, 1567
AclI AACGTT 1 cut(s) 1589
AclWI GGATC 1 cut(s) 801
AcsI RAATTY 2 cut(s) 682, 835
AcyI GRCGYC 1 cut(s) 30
AfaI GTAC 3 cut(s) 306, 659, 1550
AfeI AGCGCT 1 cut(s) 1082
AfiI CCNNNNNNNGG 2 cut(s) 78, 615
AflII CTTAAG 1 cut(s) 92
AflIII ACRYGT 3 cut(s) 1218, 1388, 1597
AhlI ACTAGT 2 cut(s) 133, 385
AloI GAACNNNNNNTCC 2 cut(s) 231, 263
AluBI AGCT 6 cut(s) 47, 97, 106, 932, 1151, 1266
AluI AGCT 6 cut(s) 47, 97, 106, 932, 1151, 1266
Alw21I GWGCWC 2 cut(s) 141, 474
Alw26I GTCTC 3 cut(s) 403, 683, 715
Alw44I GTGCAC 1 cut(s) 470
AlwI GGATC 1 cut(s) 801
Ama87I CYCGRG 1 cut(s) 140
Aor51HI AGCGCT 1 cut(s) 1082
ApaLI GTGCAC 1 cut(s) 470
ApeKI GCWGC 2 cut(s) 758, 1078
ApoI RAATTY 2 cut(s) 682, 835
AseI ATTAAT 1 cut(s) 737
AspLEI GCGC 2 cut(s) 460, 1083
AspS9I GGNCC 1 cut(s) 767
AsuNHI GCTAGC 1 cut(s) 43
AvaI CYCGRG 1 cut(s) 140
AvaII GGWCC 1 cut(s) 767
BaeGI GKGCMC 2 cut(s) 88, 474
BanI GGYRCC 1 cut(s) 83
BarI GAAGNNNNNNTAC 2 cut(s) 31, 63
BbsI GAAGAC 1 cut(s) 25
Bbv12I GWGCWC 2 cut(s) 141, 474
BbvI GCAGC 2 cut(s) 745, 1090
BccI CCATC 3 cut(s) 134, 318, 471
BciVI GTATCC 2 cut(s) 859, 1370
BcoDI GTCTC 3 cut(s) 403, 683, 715
BcuI ACTAGT 2 cut(s) 133, 385
BfaI CTAG 6 cut(s) 44, 134, 386, 1449, 1511, 1575
BfmI CTRYAG 1 cut(s) 1155
BfoI RGCGCY 1 cut(s) 1084
BfrI CTTAAG 1 cut(s) 92
BfuAI ACCTGC 1 cut(s) 1258
BfuI GTATCC 2 cut(s) 859, 1370
BglII AGATCT 2 cut(s) 66, 1451
BisI GCNGC 2 cut(s) 759, 1079
BlpI GCTNAGC 1 cut(s) 98
BlsI GCNGC 2 cut(s) 760, 1080
BmcAI AGTACT 1 cut(s) 1550
Bme18I GGWCC 1 cut(s) 767
BmeT110I CYCGRG 1 cut(s) 140
BmgT120I GGNCC 1 cut(s) 767
BmiI GGNNCC 2 cut(s) 85, 1356
BmsI GCATC 3 cut(s) 136, 565, 1261
BmtI GCTAGC 1 cut(s) 47
BoxI GACNNNNGTC 1 cut(s) 1600
BpiI GAAGAC 1 cut(s) 25
BpmI CTGGAG 1 cut(s) 565
Bpu1102I GCTNAGC 1 cut(s) 98
BpuEI CTTGAG 1 cut(s) 446
BsaHI GRCGYC 1 cut(s) 30
BsaJI CCNNGG 1 cut(s) 72
Bsc4I CCNNNNNNNGG 2 cut(s) 78, 615
Bse1I ACTGG 3 cut(s) 246, 332, 582
Bse3DI GCAATG 1 cut(s) 18
BseDI CCNNGG 1 cut(s) 72
BseGI GGATG 4 cut(s) 151, 492, 787, 1047
BseLI CCNNNNNNNGG 2 cut(s) 78, 615
BseMI GCAATG 1 cut(s) 18
BseMII CTCAG 3 cut(s) 112, 726, 861
BseNI ACTGG 3 cut(s) 246, 332, 582
BseRI GAGGAG 4 cut(s) 602, 1083, 1088, 1146
BseSI GKGCMC 2 cut(s) 88, 474
BseXI GCAGC 2 cut(s) 745, 1090
BsgI GTGCAG 1 cut(s) 1236
BshNI GGYRCC 1 cut(s) 83
BsiHKAI GWGCWC 2 cut(s) 141, 474
BsiHKCI CYCGRG 1 cut(s) 140
BslFI GGGAC 2 cut(s) 369, 975
BslI CCNNNNNNNGG 2 cut(s) 78, 615
BsmAI GTCTC 3 cut(s) 403, 683, 715
BsmBI CGTCTC 1 cut(s) 715
BsmFI GGGAC 2 cut(s) 369, 975
BsmI GAATGC 1 cut(s) 1003
BsoBI CYCGRG 1 cut(s) 140
Bsp1286I GDGCHC 3 cut(s) 88, 141, 474
Bsp1407I TGTACA 1 cut(s) 657
Bsp143I GATC 6 cut(s) 66, 291, 448, 793, 1451, 1507
Bsp1720I GCTNAGC 1 cut(s) 98
BspACI CCGC 2 cut(s) 259, 1567
BspCNI CTCAG 3 cut(s) 111, 725, 862
BspHI TCATGA 2 cut(s) 214, 1516
BspLI GGNNCC 2 cut(s) 85, 1356
BspMI ACCTGC 1 cut(s) 1258
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 1 cut(s) 801
BspT107I GGYRCC 1 cut(s) 83
BspTI CTTAAG 1 cut(s) 92
BsrDI GCAATG 1 cut(s) 18
BsrGI TGTACA 1 cut(s) 657
BsrI ACTGG 3 cut(s) 246, 332, 582
BssECI CCNNGG 1 cut(s) 72
BssMI GATC 6 cut(s) 66, 291, 448, 793, 1451, 1507
BssNI GRCGYC 1 cut(s) 30
BssT1I CCWWGG 1 cut(s) 72
Bst4CI ACNGT 4 cut(s) 414, 1156, 1343, 1558
Bst6I CTCTTC 1 cut(s) 520
BstACI GRCGYC 1 cut(s) 30
BstAFI CTTAAG 1 cut(s) 92
BstAPI GCANNNNNTGC 1 cut(s) 83
BstAUI TGTACA 1 cut(s) 657
BstC8I GCNNGC 3 cut(s) 13, 45, 104
BstDEI CTNAG 5 cut(s) 98, 435, 712, 824, 870
BstF5I GGATG 4 cut(s) 151, 492, 787, 1047
BstH2I RGCGCY 1 cut(s) 1084
BstHHI GCGC 2 cut(s) 460, 1083
BstKTI GATC 6 cut(s) 69, 294, 451, 796, 1454, 1510
BstMAI GTCTC 3 cut(s) 403, 683, 715
BstMBI GATC 6 cut(s) 66, 291, 448, 793, 1451, 1507
BstMWI GCNNNNNNNGC 4 cut(s) 53, 83, 103, 440
BstNSI RCATGY 7 cut(s) 56, 1003, 1039, 1205, 1222, 1392, 1601
BstPAI GACNNNNGTC 1 cut(s) 1600
BstSFI CTRYAG 1 cut(s) 1155
BstSLI GKGCMC 2 cut(s) 88, 474
BstV1I GCAGC 2 cut(s) 745, 1090
BstV2I GAAGAC 1 cut(s) 25
BstX2I RGATCY 3 cut(s) 66, 793, 1451
BstYI RGATCY 3 cut(s) 66, 793, 1451
BsuI GTATCC 2 cut(s) 859, 1370
BtsCI GGATG 4 cut(s) 151, 492, 787, 1047
BtsIMutI CAGTG 4 cut(s) 570, 589, 1348, 1539
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 3 cut(s) 13, 45, 104
CciI TCATGA 2 cut(s) 214, 1516
CfoI GCGC 2 cut(s) 460, 1083
Cfr13I GGNCC 1 cut(s) 767
CseI GACGC 1 cut(s) 697
Csp6I GTAC 3 cut(s) 305, 658, 1549
CspCI CAANNNNNGTGG 6 cut(s) 1013, 1048, 1269, 1304, 1515, 1550
CviQI GTAC 3 cut(s) 305, 658, 1549
DdeI CTNAG 5 cut(s) 98, 435, 712, 824, 870
DpnI GATC 6 cut(s) 68, 293, 450, 795, 1453, 1509
DpnII GATC 6 cut(s) 66, 291, 448, 793, 1451, 1507
DraI TTTAAA 3 cut(s) 909, 1063, 1498
Eam1104I CTCTTC 1 cut(s) 520
EarI CTCTTC 1 cut(s) 520
EciI GGCGGA 1 cut(s) 1556
Eco130I CCWWGG 1 cut(s) 72
Eco32I GATATC 1 cut(s) 859
Eco47I GGWCC 1 cut(s) 767
Eco47III AGCGCT 1 cut(s) 1082
Eco88I CYCGRG 1 cut(s) 140
EcoRV GATATC 1 cut(s) 859
EcoT14I CCWWGG 1 cut(s) 72
EcoT22I ATGCAT 1 cut(s) 1005
ErhI CCWWGG 1 cut(s) 72
Esp3I CGTCTC 1 cut(s) 715
FalI AAGNNNNNCTT 4 cut(s) 545, 577, 807, 839
FaqI GGGAC 2 cut(s) 369, 975
FauNDI CATATG 1 cut(s) 1416
Fnu4HI GCNGC 2 cut(s) 759, 1079
FokI GGATG 4 cut(s) 158, 499, 794, 1034
Fsp4HI GCNGC 2 cut(s) 759, 1079
FspBI CTAG 6 cut(s) 44, 134, 386, 1449, 1511, 1575
GlaI GCGC 2 cut(s) 459, 1082
GluI GCNGC 2 cut(s) 759, 1079
GsuI CTGGAG 1 cut(s) 565
HaeII RGCGCY 1 cut(s) 1084
HgaI GACGC 1 cut(s) 697
HhaI GCGC 2 cut(s) 460, 1083
Hin1I GRCGYC 1 cut(s) 30
Hin6I GCGC 2 cut(s) 458, 1081
HinP1I GCGC 2 cut(s) 458, 1081
HincII GTYRAC 2 cut(s) 277, 478
HindII GTYRAC 2 cut(s) 277, 478
HinfI GANTC 3 cut(s) 328, 872, 988
Hpy166II GTNNAC 5 cut(s) 277, 472, 478, 658, 1313
Hpy188I TCNGA 2 cut(s) 715, 1208
Hpy188III TCNNGA 5 cut(s) 215, 321, 562, 1449, 1517
Hpy8I GTNNAC 5 cut(s) 277, 472, 478, 658, 1313
HpyCH4III ACNGT 4 cut(s) 414, 1156, 1343, 1558
HpyCH4IV ACGT 4 cut(s) 30, 219, 474, 1589
HpyF10VI GCNNNNNNNGC 4 cut(s) 53, 83, 103, 440
HpyF3I CTNAG 5 cut(s) 98, 435, 712, 824, 870
HpySE526I ACGT 4 cut(s) 30, 219, 474, 1589
Hsp92I GRCGYC 1 cut(s) 30
HspAI GCGC 2 cut(s) 458, 1081
Kzo9I GATC 6 cut(s) 66, 291, 448, 793, 1451, 1507
LmnI GCTCC 2 cut(s) 929, 1075
LpnPI CCDG 7 cut(s) 25, 227, 345, 466, 595, 847, 1263
Lsp1109I GCAGC 2 cut(s) 745, 1090
LweI GCATC 3 cut(s) 136, 565, 1261
MaeI CTAG 6 cut(s) 44, 134, 386, 1449, 1511, 1575
MaeII ACGT 4 cut(s) 30, 219, 474, 1589
MaeIII GTNAC 1 cut(s) 883
MalI GATC 6 cut(s) 68, 293, 450, 795, 1453, 1509
MboI GATC 6 cut(s) 66, 291, 448, 793, 1451, 1507
MboII GAAGA 7 cut(s) 25, 166, 301, 458, 537, 689, 1415
MfeI CAATTG 2 cut(s) 876, 888
MflI RGATCY 3 cut(s) 66, 793, 1451
MhlI GDGCHC 3 cut(s) 88, 141, 474
MlyI GAGTC 2 cut(s) 881, 997
MmeI TCCRAC 1 cut(s) 831
Mph1103I ATGCAT 1 cut(s) 1005
MseI TTAA 7 cut(s) 93, 342, 737, 908, 920, 1062, 1497
MspCI CTTAAG 1 cut(s) 92
MunI CAATTG 2 cut(s) 876, 888
Mva1269I GAATGC 1 cut(s) 1003
MwoI GCNNNNNNNGC 4 cut(s) 53, 83, 103, 440
NdeI CATATG 1 cut(s) 1416
NdeII GATC 6 cut(s) 66, 291, 448, 793, 1451, 1507
NheI GCTAGC 1 cut(s) 43
NlaIV GGNNCC 2 cut(s) 85, 1356
NsiI ATGCAT 1 cut(s) 1005
NspI RCATGY 7 cut(s) 56, 1003, 1039, 1205, 1222, 1392, 1601
PaeR7I CTCGAG 1 cut(s) 140
PagI TCATGA 2 cut(s) 214, 1516
PciI ACATGT 3 cut(s) 1218, 1388, 1597
PctI GAATGC 1 cut(s) 1003
PfeI GAWTC 1 cut(s) 328
PkrI GCNGC 2 cut(s) 760, 1080
PleI GAGTC 2 cut(s) 880, 996
PpsI GAGTC 2 cut(s) 880, 996
PscI ACATGT 3 cut(s) 1218, 1388, 1597
PshAI GACNNNNGTC 1 cut(s) 1600
PshBI ATTAAT 1 cut(s) 737
PsiI TTATAA 1 cut(s) 953
Psp1406I AACGTT 1 cut(s) 1589
PspN4I GGNNCC 2 cut(s) 85, 1356
PspPI GGNCC 1 cut(s) 767
PspXI VCTCGAGB 1 cut(s) 140
PsuI RGATCY 3 cut(s) 66, 793, 1451
RsaI GTAC 3 cut(s) 306, 659, 1550
RsaNI GTAC 3 cut(s) 305, 658, 1549
SaqAI TTAA 7 cut(s) 93, 342, 737, 908, 920, 1062, 1497
SatI GCNGC 2 cut(s) 759, 1079
Sau3AI GATC 6 cut(s) 66, 291, 448, 793, 1451, 1507
Sau96I GGNCC 1 cut(s) 767
ScaI AGTACT 1 cut(s) 1550
SchI GAGTC 2 cut(s) 881, 997
SduI GDGCHC 3 cut(s) 88, 141, 474
SfaNI GCATC 3 cut(s) 136, 565, 1261
SfcI CTRYAG 1 cut(s) 1155
Sfr274I CTCGAG 1 cut(s) 140
SinI GGWCC 1 cut(s) 767
SlaI CTCGAG 1 cut(s) 140
SmlI CTYRAG 3 cut(s) 92, 140, 425
SmoI CTYRAG 3 cut(s) 92, 140, 425
SpeI ACTAGT 2 cut(s) 133, 385
SsiI CCGC 2 cut(s) 259, 1567
SspI AATATT 1 cut(s) 1243
SspMI CTAG 6 cut(s) 44, 134, 386, 1449, 1511, 1575
StyI CCWWGG 1 cut(s) 72
TaaI ACNGT 4 cut(s) 414, 1156, 1343, 1558
TaiI ACGT 4 cut(s) 33, 222, 477, 1592
TaqI TCGA 4 cut(s) 141, 742, 1467, 1594
TatI WGTACW 2 cut(s) 657, 1548
TfiI GAWTC 1 cut(s) 328
Tru1I TTAA 7 cut(s) 93, 342, 737, 908, 920, 1062, 1497
Tru9I TTAA 7 cut(s) 93, 342, 737, 908, 920, 1062, 1497
TscAI CASTG 4 cut(s) 577, 589, 1348, 1539
TseI GCWGC 2 cut(s) 758, 1078
TspDTI ATGAA 5 cut(s) 417, 798, 1036, 1416, 1505
TspRI CASTG 4 cut(s) 577, 589, 1348, 1539
Vha464I CTTAAG 1 cut(s) 92
VneI GTGCAC 1 cut(s) 470
VpaK11BI GGWCC 1 cut(s) 767
VspI ATTAAT 1 cut(s) 737
XapI RAATTY 2 cut(s) 682, 835
XbaI TCTAGA 1 cut(s) 1448
XceI RCATGY 7 cut(s) 56, 1003, 1039, 1205, 1222, 1392, 1601
XhoI CTCGAG 1 cut(s) 140
XspI CTAG 6 cut(s) 44, 134, 386, 1449, 1511, 1575
ZraI GACGTC 1 cut(s) 31
ZrmI AGTACT 1 cut(s) 1550
Zsp2I ATGCAT 1 cut(s) 1005
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.