FvH4_7g31270

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000159
Physical Location & Seq
Forward (+)
22634494 .. 22636521
2028 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g31270.t1

Sequence Viewer

Length: 1587 bp
ATGGAGTTTGCCTCCGGCATCACTGACAACGTCTTGGGAAGGCTAGCCTCATATGCTGCCCAAGAAATTTGCTTGGCATGGGGCGCCCAACTTGAGCTAAAGAAGCTCAATAACACCTTGTTAGCCATCAAAGTTGTGCTCCACGATGCAGAGAAGAAGCAGATGCAGTATTCCCTCATCATTCATTGGTTAGGAAACCTCAAAGATATCTGCAACGATGTTGAGGATGTACTAGACGAACTTGAGTTTCAAAAGCTACGACAAGTGCTCATCGACGAGCAGCGCAGCGTCAAAGGAAAGGTACACCAGTTCTTCTCTCGTTGGAATCCAATTGTTTTTAACTTCAAAATGGGTCATAAGATCAAAGAGATTAGAGAAAGACTAGTTGAGATTGATGACGAGAAGACAAAGTTTTCTCTCGTTCAAATTGCTGCACCAAGTGAAGAGTATCGTGTGCCCCAAAGGGTGCATGATAATGTAAGGGAGACTGACTCTTTACCGGAGGTGTATGTTGTTGGGAGAGATGAGGACAAAAAAAAGATTATTACTCATCTCTTGAATGACATCGACTCCAGGAATGAAAATGTTAGTGTTATCTCCATCTTCGGGTTAGGTGGCTTGGGGAAAACTACACTTGCAAAAATGGTGTACAATGAGAGTGTGGTAGAAGAACGCTTCAAGTTGCGGATGTGGATATGTGTCTCGGAGTACTTTGATAACAAAAGACTGGTTCGTGAGATTACAAGTGCTGCAACTAAGAGCAAATGTGAAGAAACTACTTTGGATCTTATGAAGACAGGGTTGCAAGATATATTGAGAGGGAAACAGTTTTTGTTAGTCTTGGATGATGTTTGGGATACAATTCCATTAGGAGTGACAACTCAAAAATGGAGAGAACTTAAAGCGTTGTTAAATGTTGGAGCATGTGGGAGTAAAATCATGGTAACAACACGCAATGAATCAGTTGCTTCGCTTGTGCATCCTGTACATCTGCATTCTTTGGAAGGTCTTTCTCACGAGGACTCCACGGCTTTGTTTAGAAAAAATGCATTCAACGAAGGGGAGGAGCAACAGTATCCACACTTGATGAAAATCGGGGAGGACATTATGAAGAACTGTGCTGGGGTTCCCTTAGCACTAGCTACTCTAGGGAGTCTGCTCTACACAAAAAGGGAGCGACGTCAGTGGTTACAAGTAAGAGATGATGAAGGCATGTCAGGAGAGAACAACATTATGGCTGCACTAAAATTGAGCTACAATGCATTGCCGCCACACTTGAAACCTTGTTTTGCATTTTGTTCACTTTACCCCAAGGATTATGAATTTCATAGTCAAGAAATAGTTGCATTATGGATGGCACAAGGCTTCCTCAAATCATCAAGAGAAAATGAAGATTTTGATGAGTTGGGTCTAGACTATATAAGGCAGTTTTGTTACAAGTCTTTGTTTCAACCAGAGTTAGATAGAAAGACTGAAATGCAGTTCAAGATTCATGATTTAGTGCATGATTTAGCAATAGCAGTGGCAGGAATAGAGTGCTCCACAGTTAACAAGCGTCCATTAGCGTCGCTCAGGAAATCTAAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

529

Amino Acids

60.54

Weight (kDa)

6.25

Isoelectric Point (pI)

37.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rx_N PF18052 10 - 89 1.8e-18 Rx N-terminal domain
NB-ARC PF00931 177 - 353 1.1e-32 NB-ARC domain
AAA_22 PF13401 197 - 310 2.7e-06 AAA domain
WHD_DRP PF23559 435 - 505 4.3e-20 Disease resistance protein Winged helix domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1183
AccB1I GGYRCC 1 cut(s) 83
AciI CCGC 2 cut(s) 685, 1268
AclWI GGATC 1 cut(s) 792
AcsI RAATTY 2 cut(s) 66, 1322
AcyI GRCGYC 2 cut(s) 84, 1180
AdeI CACNNNGTG 1 cut(s) 440
AfaI GTAC 5 cut(s) 231, 303, 650, 710, 987
AfiI CCNNNNNNNGG 1 cut(s) 606
AgsI TTSAA 9 cut(s) 251, 346, 425, 559, 679, 1054, 1279, 1451, 1486
AhlI ACTAGT 1 cut(s) 382
AjnI CCWGG 1 cut(s) 572
AluBI AGCT 5 cut(s) 97, 106, 256, 1142, 1254
AluI AGCT 5 cut(s) 97, 106, 256, 1142, 1254
Alw21I GWGCWC 3 cut(s) 141, 270, 1541
Alw26I GTCTC 2 cut(s) 479, 706
AlwI GGATC 1 cut(s) 792
ApeKI GCWGC 6 cut(s) 56, 280, 285, 431, 749, 1238
ApoI RAATTY 2 cut(s) 66, 1322
AspLEI GCGC 2 cut(s) 86, 285
AsuNHI GCTAGC 1 cut(s) 43
BaeGI GKGCMC 1 cut(s) 459
BaeI ACNNNNGTAYC 2 cut(s) 293, 326
BanI GGYRCC 1 cut(s) 83
BauI CACGAG 1 cut(s) 1016
BbsI GAAGAC 2 cut(s) 410, 800
Bbv12I GWGCWC 3 cut(s) 141, 270, 1541
BbvI GCAGC 6 cut(s) 43, 292, 297, 418, 736, 1225
BccI CCATC 3 cut(s) 134, 608, 1348
BceAI ACGGC 1 cut(s) 1044
BciT130I CCWGG 1 cut(s) 574
BciVI GTATCC 2 cut(s) 850, 1086
BcoDI GTCTC 2 cut(s) 479, 706
BcuI ACTAGT 1 cut(s) 382
BfaI CTAG 6 cut(s) 44, 233, 383, 1139, 1148, 1412
BfoI RGCGCY 1 cut(s) 87
BfuI GTATCC 2 cut(s) 850, 1086
BisI GCNGC 7 cut(s) 57, 281, 286, 432, 750, 1239, 1268
BlsI GCNGC 7 cut(s) 58, 282, 287, 433, 751, 1240, 1269
BmcAI AGTACT 1 cut(s) 710
Bme1390I CCNGG 1 cut(s) 574
BmiI GGNNCC 2 cut(s) 85, 1128
BmrFI CCNGG 1 cut(s) 574
BmsI GCATC 4 cut(s) 27, 136, 153, 988
BmtI GCTAGC 1 cut(s) 47
BpiI GAAGAC 2 cut(s) 410, 800
BplI GAGNNNNNCTC 3 cut(s) 28, 476, 508
BpmI CTGGAG 1 cut(s) 556
Bpu10I CCTNAGC 2 cut(s) 1132, 1571
BpuEI CTTGAG 2 cut(s) 113, 263
BsaBI GATNNNNATC 1 cut(s) 1091
BsaHI GRCGYC 2 cut(s) 84, 1180
BsaJI CCNNGG 2 cut(s) 1026, 1311
BsaWI WCCGGW 1 cut(s) 499
BsaXI ACNNNNNCTCC 6 cut(s) 554, 584, 1007, 1037, 1058, 1088
Bsc4I CCNNNNNNNGG 1 cut(s) 606
Bse1I ACTGG 2 cut(s) 307, 732
Bse3DI GCAATG 2 cut(s) 961, 1262
Bse8I GATNNNNATC 1 cut(s) 1091
BseBI CCWGG 1 cut(s) 574
BseDI CCNNGG 2 cut(s) 1026, 1311
BseGI GGATG 5 cut(s) 232, 693, 850, 979, 1359
BseJI GATNNNNATC 1 cut(s) 1091
BseLI CCNNNNNNNGG 1 cut(s) 606
BseMI GCAATG 2 cut(s) 961, 1262
BseMII CTCAG 1 cut(s) 1585
BseNI ACTGG 2 cut(s) 307, 732
BseRI GAGGAG 1 cut(s) 1079
BseSI GKGCMC 1 cut(s) 459
BseXI GCAGC 6 cut(s) 43, 292, 297, 418, 736, 1225
BseYI CCCAGC 1 cut(s) 1121
BsgI GTGCAG 2 cut(s) 417, 1224
BshNI GGYRCC 1 cut(s) 83
BsiHKAI GWGCWC 3 cut(s) 141, 270, 1541
BsiSI CCGG 2 cut(s) 15, 500
BslI CCNNNNNNNGG 1 cut(s) 606
BsmAI GTCTC 2 cut(s) 479, 706
BsmI GAATGC 2 cut(s) 994, 1049
Bsp1286I GDGCHC 4 cut(s) 141, 270, 459, 1541
Bsp1407I TGTACA 2 cut(s) 648, 985
Bsp143I GATC 2 cut(s) 360, 784
BspACI CCGC 2 cut(s) 685, 1268
BspCNI CTCAG 1 cut(s) 1584
BspHI TCATGA 1 cut(s) 1492
BspLI GGNNCC 2 cut(s) 85, 1128
BspOI GCTAGC 1 cut(s) 47
BspPI GGATC 1 cut(s) 792
BspT107I GGYRCC 1 cut(s) 83
BsrDI GCAATG 2 cut(s) 961, 1262
BsrGI TGTACA 2 cut(s) 648, 985
BsrI ACTGG 2 cut(s) 307, 732
BssECI CCNNGG 2 cut(s) 1026, 1311
BssMI GATC 2 cut(s) 360, 784
BssNI GRCGYC 2 cut(s) 84, 1180
BssSI CACGAG 1 cut(s) 1016
BssT1I CCWWGG 1 cut(s) 1311
Bst2BI CACGAG 1 cut(s) 1016
Bst2UI CCWGG 1 cut(s) 574
Bst4CI ACNGT 4 cut(s) 828, 1074, 1118, 1546
Bst6I CTCTTC 1 cut(s) 438
BstACI GRCGYC 2 cut(s) 84, 1180
BstAUI TGTACA 2 cut(s) 648, 985
BstC8I GCNNGC 1 cut(s) 45
BstDEI CTNAG 3 cut(s) 756, 1132, 1571
BstDSI CCRYGG 1 cut(s) 1026
BstF5I GGATG 5 cut(s) 232, 693, 850, 979, 1359
BstH2I RGCGCY 1 cut(s) 87
BstHHI GCGC 2 cut(s) 86, 285
BstKTI GATC 2 cut(s) 363, 787
BstMAI GTCTC 2 cut(s) 479, 706
BstMBI GATC 2 cut(s) 360, 784
BstMWI GCNNNNNNNGC 3 cut(s) 53, 83, 103
BstNI CCWGG 1 cut(s) 574
BstNSI RCATGY 2 cut(s) 927, 1216
BstSCI CCNGG 1 cut(s) 572
BstSLI GKGCMC 1 cut(s) 459
BstV1I GCAGC 6 cut(s) 43, 292, 297, 418, 736, 1225
BstV2I GAAGAC 2 cut(s) 410, 800
BstX2I RGATCY 1 cut(s) 784
BstYI RGATCY 1 cut(s) 784
BsuI GTATCC 2 cut(s) 850, 1086
BtgI CCRYGG 1 cut(s) 1026
BtsCI GGATG 5 cut(s) 232, 693, 850, 979, 1359
BtsI GCAGTG 1 cut(s) 1527
BtsIMutI CAGTG 3 cut(s) 21, 1190, 1527
Cac8I GCNNGC 1 cut(s) 45
CciI TCATGA 1 cut(s) 1492
CfoI GCGC 2 cut(s) 86, 285
CseI GACGC 3 cut(s) 277, 1544, 1554
Csp6I GTAC 5 cut(s) 230, 302, 649, 709, 986
CspCI CAANNNNNGTGG 2 cut(s) 1503, 1538
CviAII CATG 7 cut(s) 78, 470, 924, 940, 1213, 1493, 1505
CviQI GTAC 5 cut(s) 230, 302, 649, 709, 986
DdeI CTNAG 3 cut(s) 756, 1132, 1571
DinI GGCGCC 1 cut(s) 85
DpnI GATC 2 cut(s) 362, 786
DpnII GATC 2 cut(s) 360, 784
DraIII CACNNNGTG 1 cut(s) 440
Eam1104I CTCTTC 1 cut(s) 438
EarI CTCTTC 1 cut(s) 438
Eco130I CCWWGG 1 cut(s) 1311
Eco32I GATATC 1 cut(s) 208
EcoRII CCWGG 1 cut(s) 572
EcoRV GATATC 1 cut(s) 208
EcoT14I CCWWGG 1 cut(s) 1311
EcoT22I ATGCAT 2 cut(s) 1051, 1264
EgeI GGCGCC 1 cut(s) 85
EheI GGCGCC 1 cut(s) 85
ErhI CCWWGG 1 cut(s) 1311
FaeI CATG 7 cut(s) 81, 473, 927, 943, 1216, 1496, 1508
FatI CATG 7 cut(s) 77, 469, 923, 939, 1212, 1492, 1504
FauNDI CATATG 1 cut(s) 52
Fnu4HI GCNGC 7 cut(s) 57, 281, 286, 432, 750, 1239, 1268
FokI GGATG 5 cut(s) 239, 700, 857, 966, 1366
Fsp4HI GCNGC 7 cut(s) 57, 281, 286, 432, 750, 1239, 1268
FspBI CTAG 6 cut(s) 44, 233, 383, 1139, 1148, 1412
GlaI GCGC 2 cut(s) 85, 284
GluI GCNGC 7 cut(s) 57, 281, 286, 432, 750, 1239, 1268
GsaI CCCAGC 1 cut(s) 1125
GsuI CTGGAG 1 cut(s) 556
HaeII RGCGCY 1 cut(s) 87
HapII CCGG 2 cut(s) 15, 500
HgaI GACGC 3 cut(s) 277, 1544, 1554
HhaI GCGC 2 cut(s) 86, 285
Hin1I GRCGYC 2 cut(s) 84, 1180
Hin1II CATG 7 cut(s) 81, 473, 927, 943, 1216, 1496, 1508
Hin6I GCGC 2 cut(s) 84, 283
HinP1I GCGC 2 cut(s) 84, 283
HincII GTYRAC 1 cut(s) 1549
HindII GTYRAC 1 cut(s) 1549
HinfI GANTC 7 cut(s) 325, 491, 569, 959, 1022, 1153, 1489
HpaI GTTAAC 1 cut(s) 1549
HpaII CCGG 2 cut(s) 15, 500
Hpy166II GTNNAC 4 cut(s) 304, 649, 1301, 1549
Hpy188I TCNGA 1 cut(s) 706
Hpy8I GTNNAC 4 cut(s) 304, 649, 1301, 1549
Hpy99I CGWCG 3 cut(s) 278, 1182, 1570
HpyAV CCTTC 4 cut(s) 33, 998, 1052, 1202
HpyCH4III ACNGT 4 cut(s) 828, 1074, 1118, 1546
HpyCH4IV ACGT 2 cut(s) 30, 1180
HpyF10VI GCNNNNNNNGC 3 cut(s) 53, 83, 103
HpyF3I CTNAG 3 cut(s) 756, 1132, 1571
HpySE526I ACGT 2 cut(s) 30, 1180
Hsp92I GRCGYC 2 cut(s) 84, 1180
Hsp92II CATG 7 cut(s) 81, 473, 927, 943, 1216, 1496, 1508
HspAI GCGC 2 cut(s) 84, 283
KasI GGCGCC 1 cut(s) 83
KspAI GTTAAC 1 cut(s) 1549
Kzo9I GATC 2 cut(s) 360, 784
LmnI GCTCC 5 cut(s) 144, 920, 1066, 1174, 1544
Lsp1109I GCAGC 6 cut(s) 43, 292, 297, 418, 736, 1225
LweI GCATC 4 cut(s) 27, 136, 153, 988
MaeI CTAG 6 cut(s) 44, 233, 383, 1139, 1148, 1412
MaeII ACGT 2 cut(s) 30, 1180
MaeIII GTNAC 4 cut(s) 874, 943, 1188, 1433
MalI GATC 2 cut(s) 362, 786
MboI GATC 2 cut(s) 360, 784
MfeI CAATTG 1 cut(s) 330
MflI RGATCY 1 cut(s) 784
MhlI GDGCHC 4 cut(s) 141, 270, 459, 1541
MluCI AATT 6 cut(s) 66, 330, 426, 861, 1247, 1322
Mly113I GGCGCC 1 cut(s) 84
MlyI GAGTC 4 cut(s) 485, 563, 1016, 1162
MmeI TCCRAC 2 cut(s) 302, 898
Mph1103I ATGCAT 2 cut(s) 1051, 1264
MseI TTAA 4 cut(s) 339, 900, 911, 1548
MslI CAYNNNNRTG 1 cut(s) 474
MspI CCGG 2 cut(s) 15, 500
MspR9I CCNGG 1 cut(s) 574
MunI CAATTG 1 cut(s) 330
Mva1269I GAATGC 2 cut(s) 994, 1049
MvaI CCWGG 1 cut(s) 574
MwoI GCNNNNNNNGC 3 cut(s) 53, 83, 103
NarI GGCGCC 1 cut(s) 84
NdeI CATATG 1 cut(s) 52
NdeII GATC 2 cut(s) 360, 784
NheI GCTAGC 1 cut(s) 43
NlaIII CATG 7 cut(s) 81, 473, 927, 943, 1216, 1496, 1508
NlaIV GGNNCC 2 cut(s) 85, 1128
NmuCI GTSAC 1 cut(s) 874
NsiI ATGCAT 2 cut(s) 1051, 1264
NspI RCATGY 2 cut(s) 927, 1216
PagI TCATGA 1 cut(s) 1492
PctI GAATGC 2 cut(s) 994, 1049
PfeI GAWTC 3 cut(s) 325, 959, 1489
PflFI GACNNNGTC 1 cut(s) 29
PfoI TCCNGGA 1 cut(s) 572
PkrI GCNGC 7 cut(s) 58, 282, 287, 433, 751, 1240, 1269
PleI GAGTC 4 cut(s) 485, 563, 1016, 1161
PluTI GGCGCC 1 cut(s) 87
PpsI GAGTC 4 cut(s) 485, 563, 1016, 1161
Psp6I CCWGG 1 cut(s) 572
PspFI CCCAGC 1 cut(s) 1121
PspGI CCWGG 1 cut(s) 572
PspN4I GGNNCC 2 cut(s) 85, 1128
PsuI RGATCY 1 cut(s) 784
PsyI GACNNNGTC 1 cut(s) 29
RsaI GTAC 5 cut(s) 231, 303, 650, 710, 987
RsaNI GTAC 5 cut(s) 230, 302, 649, 709, 986
RseI CAYNNNNRTG 1 cut(s) 474
SaqAI TTAA 4 cut(s) 339, 900, 911, 1548
SatI GCNGC 7 cut(s) 57, 281, 286, 432, 750, 1239, 1268
Sau3AI GATC 2 cut(s) 360, 784
ScaI AGTACT 1 cut(s) 710
SchI GAGTC 4 cut(s) 485, 563, 1016, 1162
ScrFI CCNGG 1 cut(s) 574
SduI GDGCHC 4 cut(s) 141, 270, 459, 1541
SfaNI GCATC 4 cut(s) 27, 136, 153, 988
SfoI GGCGCC 1 cut(s) 85
SmiMI CAYNNNNRTG 1 cut(s) 474
SmlI CTYRAG 2 cut(s) 92, 242
SmoI CTYRAG 2 cut(s) 92, 242
SpeI ACTAGT 1 cut(s) 382
Sse9I AATT 6 cut(s) 66, 330, 426, 861, 1247, 1322
SsiI CCGC 2 cut(s) 685, 1268
SspDI GGCGCC 1 cut(s) 83
SspMI CTAG 6 cut(s) 44, 233, 383, 1139, 1148, 1412
StyD4I CCNGG 1 cut(s) 572
StyI CCWWGG 1 cut(s) 1311
TaaI ACNGT 4 cut(s) 828, 1074, 1118, 1546
TaiI ACGT 2 cut(s) 33, 1183
TaqI TCGA 2 cut(s) 273, 567
TasI AATT 6 cut(s) 66, 330, 426, 861, 1247, 1322
TatI WGTACW 4 cut(s) 229, 648, 708, 985
TauI GCSGC 1 cut(s) 1270
TfiI GAWTC 3 cut(s) 325, 959, 1489
Tru1I TTAA 4 cut(s) 339, 900, 911, 1548
Tru9I TTAA 4 cut(s) 339, 900, 911, 1548
TscAI CASTG 3 cut(s) 28, 1190, 1527
TseFI GTSAC 1 cut(s) 874
TseI GCWGC 6 cut(s) 56, 280, 285, 431, 749, 1238
Tsp45I GTSAC 1 cut(s) 874
TspRI CASTG 3 cut(s) 28, 1190, 1527
Tth111I GACNNNGTC 1 cut(s) 29
XapI RAATTY 2 cut(s) 66, 1322
XbaI TCTAGA 1 cut(s) 1411
XceI RCATGY 2 cut(s) 927, 1216
XspI CTAG 6 cut(s) 44, 233, 383, 1139, 1148, 1412
ZraI GACGTC 1 cut(s) 1181
ZrmI AGTACT 1 cut(s) 710
Zsp2I ATGCAT 2 cut(s) 1051, 1264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.