Rh2CG267500

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
OG0000159
Physical Location & Seq
Reverse (-)
28899302 .. 28900534
1233 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG267500.1

Sequence Viewer

Length: 1233 bp
ATGGGTTTAGACTATATAAGGGAGTTTTGCTCTAGATCTTTGTTTCAAGTCGAGGGTGATATCAAAACAGCCATATTTTTTAAAATACATGATCTCATTCATGATTTAACAATTTCAGTGGCACAAGTAGAGTACTCCACAGTCAATTTTCGTCCCTCTAGTGATTTTGAAATGGTTCGACATGTGTCAATATCTAAAAAGGACTTGCTTGGGGAAGAGGCACAAGTTTCTGATTTCATGCTCACATCAAAGAAATTGCGAACCATTTTAGTTCCTGAAAAAGGTCAGATGAGTCAACGTTTTGTGAAGACATGCATTTTGAGATTCAAATATATGCGGGTGCTAGATCTCAGGAGGTCGCCTCTTGAGGAGCTACCAAGTTCCATTGGTAGTTTGTTTCATCTGAGATTTCTCAGCTTGTTTTCTAATAGGAAGATAAAAAGGCTTCCCAATTCCATCAGTAAGCTGCTGAATTTGGAGTACTTGAACCTTGAGGGTTGCAACGCACTTGAGGAAATACCCAAAGACATAGGGAACCTGATCAACCTACGAAGCTTGACGATAACAACACAGCAGACGTATTTGCCAAAAGGAATTTGGCACCTCACCTTACTTCAATATTTAGAATTTCATGGATGCGTCAATCTTAAATCTTTGGGCGAAGAGATCCAATTCCTCAACAACCTTCGCAAATTGTGGATTAGCAGTTGTAATAATTTGGTATCATTGCCACCAAATATGAAACACGCGACTGCTTTAGATACTTTTGGTGTCAATGATTGCGTCAAGCTTCAGGTGATGATGAGATCAGGGGAAGGTCCTCAACGTCTTCGATCATTGCTTATCGCGAAGTCAAGTTTGGAGGCTTTGCCCCCTTGGCTCATTGAAGATTCTGCAGACACTCTACAGAGCATAGTACTTTCTGAATGTCATAATCTCACGGCACTTCCGCAGTTGATAAAGTTCAGATTCCTCGAGCAACTACGCATTGAAGAATGCTTCAAATTGTCGGCTTTGCCGCAGGAGTTGCATTGCCTTACTGAGTTGAGAGAACTGTATATTGAAGGATGTCCTGAATTGAGCAAAAGCTGCAAAAGGCAATTAAAAGGTGAGGAGTGGTCAAAGATGGCACGTCACGTGAAGATTACACTCGACGCTGATAATGAAGAAGATGAAGCCGACAATCGCTTGGCCGATGGTAGGATCGCGTACCACACGCGACGACGCCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

410

Amino Acids

47.31

Weight (kDa)

8.41

Isoelectric Point (pI)

58.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
LRR_14 PF23598 106 - 305 8.7e-24 Leucine-rich repeat region
LRR_R13L1-DRL21 PF25019 274 - 333 4.6e-08 R13L1/DRL21 LRRs
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 600
AccII CGCG 4 cut(s) 749, 848, 1208, 1219
AciI CCGC 3 cut(s) 337, 950, 1019
AclI AACGTT 1 cut(s) 298
AclWI GGATC 2 cut(s) 661, 1211
AcoI YGGCCR 1 cut(s) 1191
AcsI RAATTY 3 cut(s) 472, 594, 626
AcuI CTGAAG 1 cut(s) 776
AcvI CACGTG 1 cut(s) 1138
AcyI GRCGYC 1 cut(s) 1225
AfaI GTAC 4 cut(s) 134, 482, 918, 1211
AfiI CCNNNNNNNGG 2 cut(s) 281, 1200
AflIII ACRYGT 1 cut(s) 181
AgsI TTSAA 9 cut(s) 47, 170, 328, 487, 617, 887, 992, 1003, 1064
AjiI CACGTC 1 cut(s) 1133
AjuI GAANNNNNNNTTGG 2 cut(s) 842, 874
AluBI AGCT 6 cut(s) 373, 417, 466, 555, 790, 1089
AluI AGCT 6 cut(s) 373, 417, 466, 555, 790, 1089
AlwI GGATC 2 cut(s) 661, 1211
Ama87I CYCGRG 1 cut(s) 974
AoxI GGCC 1 cut(s) 1191
ApeKI GCWGC 2 cut(s) 466, 1089
ApoI RAATTY 3 cut(s) 472, 594, 626
ArsI GACNNNNNNTTYG 2 cut(s) 301, 333
Asp700I GAANNNNTTC 1 cut(s) 174
AspS9I GGNCC 1 cut(s) 818
AsuHPI GGTGA 4 cut(s) 68, 598, 808, 1121
AvaI CYCGRG 1 cut(s) 974
AvaII GGWCC 1 cut(s) 818
BanI GGYRCC 1 cut(s) 600
BbrPI CACGTG 1 cut(s) 1138
BbsI GAAGAC 2 cut(s) 314, 821
BbvI GCAGC 2 cut(s) 453, 1076
BccI CCATC 3 cut(s) 464, 1120, 1190
BceAI ACGGC 2 cut(s) 957, 1212
BclI TGATCA 1 cut(s) 540
BfaI CTAG 3 cut(s) 33, 159, 344
BfmI CTRYAG 2 cut(s) 894, 905
BglI GCCNNNNNGGC 1 cut(s) 877
BglII AGATCT 2 cut(s) 35, 346
BisI GCNGC 3 cut(s) 467, 1019, 1090
BlsI GCNGC 3 cut(s) 468, 1020, 1091
BmcAI AGTACT 3 cut(s) 134, 482, 918
Bme18I GGWCC 1 cut(s) 818
BmeT110I CYCGRG 1 cut(s) 974
BmgBI CACGTC 1 cut(s) 1133
BmgT120I GGNCC 1 cut(s) 818
BmiI GGNNCC 2 cut(s) 536, 602
BmsI GCATC 1 cut(s) 626
BoxI GACNNNNGTC 1 cut(s) 184
BpiI GAAGAC 2 cut(s) 314, 821
BplI GAGNNNNNCTC 4 cut(s) 14, 46, 346, 378
BpuEI CTTGAG 3 cut(s) 386, 512, 530
BsaAI YACGTR 1 cut(s) 1138
BsaHI GRCGYC 1 cut(s) 1225
BsaJI CCNNGG 1 cut(s) 875
Bsc4I CCNNNNNNNGG 2 cut(s) 281, 1200
Bse3DI GCAATG 3 cut(s) 725, 836, 1030
BseDI CCNNGG 1 cut(s) 875
BseGI GGATG 2 cut(s) 641, 1073
BseLI CCNNNNNNNGG 2 cut(s) 281, 1200
BseMI GCAATG 3 cut(s) 725, 836, 1030
BseMII CTCAG 4 cut(s) 364, 395, 427, 1032
BseRI GAGGAG 2 cut(s) 383, 1127
BseXI GCAGC 2 cut(s) 453, 1076
Bsh1236I CGCG 4 cut(s) 749, 848, 1208, 1219
BshFI GGCC 1 cut(s) 1193
BshNI GGYRCC 1 cut(s) 600
BsiHKCI CYCGRG 1 cut(s) 974
BslFI GGGAC 1 cut(s) 138
BslI CCNNNNNNNGG 2 cut(s) 281, 1200
BsmFI GGGAC 1 cut(s) 138
BsmI GAATGC 1 cut(s) 1001
BsnI GGCC 1 cut(s) 1193
BsoBI CYCGRG 1 cut(s) 974
Bsp143I GATC 8 cut(s) 35, 91, 346, 540, 666, 806, 833, 1203
Bsp68I TCGCGA 1 cut(s) 848
BspACI CCGC 3 cut(s) 337, 950, 1019
BspANI GGCC 1 cut(s) 1193
BspCNI CTCAG 4 cut(s) 363, 396, 426, 1033
BspFNI CGCG 4 cut(s) 749, 848, 1208, 1219
BspHI TCATGA 1 cut(s) 100
BspLI GGNNCC 2 cut(s) 536, 602
BspMAI CTGCAG 1 cut(s) 898
BspPI GGATC 2 cut(s) 661, 1211
BspT107I GGYRCC 1 cut(s) 600
BsrDI GCAATG 3 cut(s) 725, 836, 1030
BssECI CCNNGG 1 cut(s) 875
BssMI GATC 8 cut(s) 35, 91, 346, 540, 666, 806, 833, 1203
BssNI GRCGYC 1 cut(s) 1225
BssT1I CCWWGG 1 cut(s) 875
Bst4CI ACNGT 2 cut(s) 142, 1056
Bst6I CTCTTC 2 cut(s) 210, 657
BstACI GRCGYC 1 cut(s) 1225
BstAPI GCANNNNNTGC 2 cut(s) 1027, 1089
BstBAI YACGTR 1 cut(s) 1138
BstDEI CTNAG 4 cut(s) 350, 404, 413, 1041
BstENI CCTNNNNNAGG 1 cut(s) 279
BstF5I GGATG 2 cut(s) 641, 1073
BstFNI CGCG 4 cut(s) 749, 848, 1208, 1219
BstKTI GATC 8 cut(s) 38, 94, 349, 543, 669, 809, 836, 1206
BstMBI GATC 8 cut(s) 35, 91, 346, 540, 666, 806, 833, 1203
BstMWI GCNNNNNNNGC 3 cut(s) 877, 1027, 1089
BstNSI RCATGY 2 cut(s) 185, 315
BstPAI GACNNNNGTC 1 cut(s) 184
BstSFI CTRYAG 2 cut(s) 894, 905
BstUI CGCG 4 cut(s) 749, 848, 1208, 1219
BstV1I GCAGC 2 cut(s) 453, 1076
BstV2I GAAGAC 2 cut(s) 314, 821
BstX2I RGATCY 3 cut(s) 35, 346, 666
BstYI RGATCY 3 cut(s) 35, 346, 666
BsuRI GGCC 1 cut(s) 1193
BtrI CACGTC 1 cut(s) 1133
BtsCI GGATG 2 cut(s) 641, 1073
BtsIMutI CAGTG 1 cut(s) 123
BtuMI TCGCGA 1 cut(s) 848
CciI TCATGA 1 cut(s) 100
Cfr13I GGNCC 1 cut(s) 818
CseI GACGC 3 cut(s) 628, 772, 1163
Csp6I GTAC 4 cut(s) 133, 481, 917, 1210
CspCI CAANNNNNGTGG 2 cut(s) 99, 134
CviAII CATG 6 cut(s) 89, 101, 182, 238, 312, 632
CviQI GTAC 4 cut(s) 133, 481, 917, 1210
DdeI CTNAG 4 cut(s) 350, 404, 413, 1041
DpnI GATC 8 cut(s) 37, 93, 348, 542, 668, 808, 835, 1205
DpnII GATC 8 cut(s) 35, 91, 346, 540, 666, 806, 833, 1203
DraI TTTAAA 1 cut(s) 82
EaeI YGGCCR 1 cut(s) 1191
Eam1104I CTCTTC 2 cut(s) 210, 657
EarI CTCTTC 2 cut(s) 210, 657
Eco130I CCWWGG 1 cut(s) 875
Eco32I GATATC 1 cut(s) 61
Eco47I GGWCC 1 cut(s) 818
Eco57I CTGAAG 1 cut(s) 776
Eco72I CACGTG 1 cut(s) 1138
Eco88I CYCGRG 1 cut(s) 974
EcoNI CCTNNNNNAGG 1 cut(s) 279
EcoO109I RGGNCCY 1 cut(s) 818
EcoRV GATATC 1 cut(s) 61
EcoT14I CCWWGG 1 cut(s) 875
EcoT22I ATGCAT 1 cut(s) 317
ErhI CCWWGG 1 cut(s) 875
FaeI CATG 6 cut(s) 92, 104, 185, 241, 315, 635
FaqI GGGAC 1 cut(s) 138
FatI CATG 6 cut(s) 88, 100, 181, 237, 311, 631
FauI CCCGC 1 cut(s) 330
FbaI TGATCA 1 cut(s) 540
Fnu4HI GCNGC 3 cut(s) 467, 1019, 1090
FokI GGATG 2 cut(s) 648, 1080
Fsp4HI GCNGC 3 cut(s) 467, 1019, 1090
FspBI CTAG 3 cut(s) 33, 159, 344
GluI GCNGC 3 cut(s) 467, 1019, 1090
HaeIII GGCC 1 cut(s) 1193
HgaI GACGC 3 cut(s) 628, 772, 1163
Hin1I GRCGYC 1 cut(s) 1225
Hin1II CATG 6 cut(s) 92, 104, 185, 241, 315, 635
HincII GTYRAC 1 cut(s) 296
HindII GTYRAC 1 cut(s) 296
HindIII AAGCTT 2 cut(s) 553, 788
HinfI GANTC 4 cut(s) 292, 324, 890, 969
HphI GGTGA 4 cut(s) 68, 598, 808, 1121
Hpy166II GTNNAC 1 cut(s) 296
Hpy188I TCNGA 5 cut(s) 232, 288, 405, 925, 968
Hpy188III TCNNGA 7 cut(s) 33, 101, 275, 352, 365, 847, 1073
Hpy8I GTNNAC 1 cut(s) 296
Hpy99I CGWCG 3 cut(s) 1157, 1224, 1227
HpyAV CCTTC 3 cut(s) 695, 809, 1058
HpyCH4III ACNGT 2 cut(s) 142, 1056
HpyCH4IV ACGT 5 cut(s) 298, 578, 826, 1132, 1137
HpyCH4V TGCA 5 cut(s) 315, 501, 896, 1030, 1092
HpyF10VI GCNNNNNNNGC 3 cut(s) 877, 1027, 1089
HpyF3I CTNAG 4 cut(s) 350, 404, 413, 1041
HpySE526I ACGT 5 cut(s) 298, 578, 826, 1132, 1137
Hsp92I GRCGYC 1 cut(s) 1225
Hsp92II CATG 6 cut(s) 92, 104, 185, 241, 315, 635
Ksp22I TGATCA 1 cut(s) 540
Kzo9I GATC 8 cut(s) 35, 91, 346, 540, 666, 806, 833, 1203
LmnI GCTCC 1 cut(s) 370
LpnPI CCDG 7 cut(s) 288, 337, 551, 779, 795, 1007, 1086
Lsp1109I GCAGC 2 cut(s) 453, 1076
LweI GCATC 1 cut(s) 626
MaeI CTAG 3 cut(s) 33, 159, 344
MaeII ACGT 5 cut(s) 298, 578, 826, 1132, 1137
MaeIII GTNAC 1 cut(s) 1133
MalI GATC 8 cut(s) 37, 93, 348, 542, 668, 808, 835, 1205
MboI GATC 8 cut(s) 35, 91, 346, 540, 666, 806, 833, 1203
MflI RGATCY 3 cut(s) 35, 346, 666
MlyI GAGTC 1 cut(s) 301
Mph1103I ATGCAT 1 cut(s) 317
MroXI GAANNNNTTC 1 cut(s) 174
MseI TTAA 4 cut(s) 81, 107, 648, 1103
Mva1269I GAATGC 1 cut(s) 1001
MvnI CGCG 4 cut(s) 749, 848, 1208, 1219
MwoI GCNNNNNNNGC 3 cut(s) 877, 1027, 1089
NdeII GATC 8 cut(s) 35, 91, 346, 540, 666, 806, 833, 1203
NlaIII CATG 6 cut(s) 92, 104, 185, 241, 315, 635
NlaIV GGNNCC 2 cut(s) 536, 602
NmuCI GTSAC 1 cut(s) 1133
NruI TCGCGA 1 cut(s) 848
NsiI ATGCAT 1 cut(s) 317
NspI RCATGY 2 cut(s) 185, 315
PaeR7I CTCGAG 1 cut(s) 974
PagI TCATGA 1 cut(s) 100
PciI ACATGT 1 cut(s) 181
PctI GAATGC 1 cut(s) 1001
PdmI GAANNNNTTC 1 cut(s) 174
PfeI GAWTC 3 cut(s) 324, 890, 969
PkrI GCNGC 3 cut(s) 468, 1020, 1091
PleI GAGTC 1 cut(s) 300
PmaCI CACGTG 1 cut(s) 1138
PmlI CACGTG 1 cut(s) 1138
PpsI GAGTC 1 cut(s) 300
Ppu21I YACGTR 1 cut(s) 1138
PpuMI RGGWCCY 1 cut(s) 818
PscI ACATGT 1 cut(s) 181
PshAI GACNNNNGTC 1 cut(s) 184
Psp1406I AACGTT 1 cut(s) 298
Psp5II RGGWCCY 1 cut(s) 818
PspCI CACGTG 1 cut(s) 1138
PspN4I GGNNCC 2 cut(s) 536, 602
PspPI GGNCC 1 cut(s) 818
PspPPI RGGWCCY 1 cut(s) 818
PspXI VCTCGAGB 1 cut(s) 974
PstI CTGCAG 1 cut(s) 898
PsuI RGATCY 3 cut(s) 35, 346, 666
RruI TCGCGA 1 cut(s) 848
RsaI GTAC 4 cut(s) 134, 482, 918, 1211
RsaNI GTAC 4 cut(s) 133, 481, 917, 1210
SaqAI TTAA 4 cut(s) 81, 107, 648, 1103
SatI GCNGC 3 cut(s) 467, 1019, 1090
Sau3AI GATC 8 cut(s) 35, 91, 346, 540, 666, 806, 833, 1203
Sau96I GGNCC 1 cut(s) 818
ScaI AGTACT 3 cut(s) 134, 482, 918
SchI GAGTC 1 cut(s) 301
SfaNI GCATC 1 cut(s) 626
SfcI CTRYAG 2 cut(s) 894, 905
Sfr274I CTCGAG 1 cut(s) 974
SinI GGWCC 1 cut(s) 818
SlaI CTCGAG 1 cut(s) 974
SmlI CTYRAG 4 cut(s) 365, 491, 509, 974
SmoI CTYRAG 4 cut(s) 365, 491, 509, 974
SsiI CCGC 3 cut(s) 337, 950, 1019
SspI AATATT 1 cut(s) 620
SspMI CTAG 3 cut(s) 33, 159, 344
StyI CCWWGG 1 cut(s) 875
TaaI ACNGT 2 cut(s) 142, 1056
TaiI ACGT 5 cut(s) 301, 581, 829, 1135, 1140
TaqI TCGA 5 cut(s) 51, 178, 832, 975, 1152
TatI WGTACW 3 cut(s) 132, 480, 916
TauI GCSGC 1 cut(s) 1021
TfiI GAWTC 3 cut(s) 324, 890, 969
Tru1I TTAA 4 cut(s) 81, 107, 648, 1103
Tru9I TTAA 4 cut(s) 81, 107, 648, 1103
TscAI CASTG 1 cut(s) 123
TseFI GTSAC 1 cut(s) 1133
TseI GCWGC 2 cut(s) 466, 1089
Tsp45I GTSAC 1 cut(s) 1133
TspDTI ATGAA 7 cut(s) 89, 226, 389, 620, 755, 1179, 1188
TspRI CASTG 1 cut(s) 123
VpaK11BI GGWCC 1 cut(s) 818
XagI CCTNNNNNAGG 1 cut(s) 279
XapI RAATTY 3 cut(s) 472, 594, 626
XbaI TCTAGA 1 cut(s) 32
XceI RCATGY 2 cut(s) 185, 315
XcmI CCANNNNNNNNNTGG 1 cut(s) 594
XhoI CTCGAG 1 cut(s) 974
XmnI GAANNNNTTC 1 cut(s) 174
XspI CTAG 3 cut(s) 33, 159, 344
ZrmI AGTACT 3 cut(s) 134, 482, 918
Zsp2I ATGCAT 1 cut(s) 317
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.