Belongs to the disease resistance NB-LRR family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rx_N | PF18052 | 10 - 90 | 1.7e-17 | Rx N-terminal domain |
| NB-ARC | PF00931 | 178 - 356 | 4.4e-32 | NB-ARC domain |
| WHD_DRP | PF23559 | 439 - 509 | 6.7e-18 | Disease resistance protein Winged helix domain |
| LRR_14 | PF23598 | 577 - 769 | 8.8e-26 | Leucine-rich repeat region |
| LRR_13 | PF23286 | 594 - 738 | 3.6e-06 | Disease resistance protein RPS4B-like, leucine-rich repeats |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 953 |
| Acc36I | ACCTGC | 1 cut(s) | 1258 |
| AccI | GTMKAC | 1 cut(s) | 276 |
| AccIII | TCCGGA | 1 cut(s) | 2362 |
| AciI | CCGC | 4 cut(s) | 1756, 1913, 2172, 2432 |
| AclWI | GGATC | 4 cut(s) | 443, 801, 2080, 2480 |
| AcoI | YGGCCR | 1 cut(s) | 2604 |
| AcsI | RAATTY | 3 cut(s) | 682, 837, 1891 |
| AcuI | CTGAAG | 2 cut(s) | 465, 2195 |
| AcyI | GRCGYC | 1 cut(s) | 2020 |
| AfaI | GTAC | 4 cut(s) | 306, 659, 1550, 2110 |
| AfeI | AGCGCT | 1 cut(s) | 1082 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 78, 615, 1975 |
| AflIII | ACRYGT | 2 cut(s) | 1218, 1597 |
| AgeI | ACCGGT | 1 cut(s) | 2655 |
| AhlI | ACTAGT | 3 cut(s) | 133, 334, 385 |
| AjiI | CACGTC | 1 cut(s) | 2546 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 231, 263 |
| Alw21I | GWGCWC | 4 cut(s) | 99, 141, 474, 1372 |
| Alw26I | GTCTC | 7 cut(s) | 349, 403, 683, 715, 1463, 1892, 1938 |
| Alw44I | GTGCAC | 1 cut(s) | 470 |
| AlwI | GGATC | 4 cut(s) | 443, 801, 2080, 2480 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2502 |
| Ama87I | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| Aor13HI | TCCGGA | 1 cut(s) | 2362 |
| Aor51HI | AGCGCT | 1 cut(s) | 1082 |
| AoxI | GGCC | 2 cut(s) | 1906, 2604 |
| ApaLI | GTGCAC | 1 cut(s) | 470 |
| ApeKI | GCWGC | 5 cut(s) | 15, 758, 1078, 1885, 2502 |
| ApoI | RAATTY | 3 cut(s) | 682, 837, 1891 |
| AseI | ATTAAT | 2 cut(s) | 737, 753 |
| AsiGI | ACCGGT | 1 cut(s) | 2655 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1590 |
| AspLEI | GCGC | 3 cut(s) | 460, 1083, 1762 |
| AspS9I | GGNCC | 3 cut(s) | 767, 1906, 2234 |
| AsuHPI | GGTGA | 5 cut(s) | 91, 164, 2017, 2534, 2563 |
| AvaI | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| AvaII | GGWCC | 2 cut(s) | 767, 2234 |
| BaeGI | GKGCMC | 2 cut(s) | 88, 474 |
| BanII | GRGCYC | 1 cut(s) | 99 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 31, 63 |
| BauI | CACGAG | 1 cut(s) | 453 |
| BbsI | GAAGAC | 3 cut(s) | 1733, 1833, 2237 |
| Bbv12I | GWGCWC | 4 cut(s) | 99, 141, 474, 1372 |
| BbvI | GCAGC | 5 cut(s) | 27, 745, 1090, 1872, 2489 |
| BccI | CCATC | 4 cut(s) | 134, 318, 1188, 1883 |
| BceAI | ACGGC | 1 cut(s) | 2370 |
| BciVI | GTATCC | 1 cut(s) | 1370 |
| BclI | TGATCA | 1 cut(s) | 1959 |
| BcoDI | GTCTC | 7 cut(s) | 349, 403, 683, 715, 1463, 1892, 1938 |
| BcuI | ACTAGT | 3 cut(s) | 133, 334, 385 |
| BfaI | CTAG | 9 cut(s) | 44, 134, 335, 386, 1449, 1511, 1575, 1692, 1763 |
| BfmI | CTRYAG | 3 cut(s) | 1155, 2307, 2318 |
| BfoI | RGCGCY | 2 cut(s) | 1084, 1763 |
| BfuAI | ACCTGC | 1 cut(s) | 1258 |
| BfuI | GTATCC | 1 cut(s) | 1370 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2293 |
| BglII | AGATCT | 4 cut(s) | 66, 1451, 1474, 1765 |
| BisI | GCNGC | 6 cut(s) | 16, 759, 1079, 1886, 2432, 2503 |
| BlsI | GCNGC | 6 cut(s) | 17, 760, 1080, 1887, 2433, 2504 |
| BmcAI | AGTACT | 1 cut(s) | 1550 |
| Bme18I | GGWCC | 2 cut(s) | 767, 2234 |
| BmeT110I | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| BmgBI | CACGTC | 1 cut(s) | 2546 |
| BmgT120I | GGNCC | 3 cut(s) | 767, 1906, 2234 |
| BmiI | GGNNCC | 2 cut(s) | 1356, 1955 |
| BmsI | GCATC | 4 cut(s) | 136, 565, 1261, 1743 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1600 |
| BpiI | GAAGAC | 3 cut(s) | 1733, 1833, 2237 |
| BpmI | CTGGAG | 1 cut(s) | 565 |
| BpuEI | CTTGAG | 5 cut(s) | 113, 446, 1643, 1949, 2223 |
| Bsa29I | ATCGAT | 1 cut(s) | 2193 |
| BsaHI | GRCGYC | 1 cut(s) | 2020 |
| BsaI | GGTCTC | 1 cut(s) | 1892 |
| BsaJI | CCNNGG | 3 cut(s) | 72, 1902, 2291 |
| BsaWI | WCCGGW | 2 cut(s) | 2362, 2655 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 78, 615, 1975 |
| Bse118I | RCCGGY | 1 cut(s) | 2655 |
| Bse1I | ACTGG | 4 cut(s) | 246, 582, 2118, 2124 |
| Bse3DI | GCAATG | 3 cut(s) | 18, 1274, 2443 |
| BseAI | TCCGGA | 1 cut(s) | 2362 |
| BseCI | ATCGAT | 1 cut(s) | 2193 |
| BseDI | CCNNGG | 3 cut(s) | 72, 1902, 2291 |
| BseGI | GGATG | 5 cut(s) | 151, 492, 787, 1047, 2060 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 78, 615, 1975 |
| BseMI | GCAATG | 3 cut(s) | 18, 1274, 2443 |
| BseMII | CTCAG | 2 cut(s) | 1783, 2625 |
| BseNI | ACTGG | 4 cut(s) | 246, 582, 2118, 2124 |
| BseRI | GAGGAG | 7 cut(s) | 602, 1083, 1088, 1146, 1802, 1946, 2540 |
| BseSI | GKGCMC | 2 cut(s) | 88, 474 |
| BseXI | GCAGC | 5 cut(s) | 27, 745, 1090, 1872, 2489 |
| BsgI | GTGCAG | 1 cut(s) | 1236 |
| BshFI | GGCC | 2 cut(s) | 1908, 2606 |
| BshTI | ACCGGT | 1 cut(s) | 2655 |
| BshVI | ATCGAT | 1 cut(s) | 2193 |
| BsiHKAI | GWGCWC | 4 cut(s) | 99, 141, 474, 1372 |
| BsiHKCI | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| BsiSI | CCGG | 2 cut(s) | 2363, 2656 |
| BslFI | GGGAC | 1 cut(s) | 1554 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 78, 615, 1975 |
| BsmAI | GTCTC | 7 cut(s) | 349, 403, 683, 715, 1463, 1892, 1938 |
| BsmFI | GGGAC | 1 cut(s) | 1554 |
| BsmI | GAATGC | 3 cut(s) | 1003, 2147, 2414 |
| BsnI | GGCC | 2 cut(s) | 1908, 2606 |
| Bso31I | GGTCTC | 1 cut(s) | 1892 |
| BsoBI | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| Bsp1286I | GDGCHC | 5 cut(s) | 88, 99, 141, 474, 1372 |
| Bsp13I | TCCGGA | 1 cut(s) | 2362 |
| Bsp1407I | TGTACA | 1 cut(s) | 657 |
| BspACI | CCGC | 4 cut(s) | 1756, 1913, 2172, 2432 |
| BspANI | GGCC | 2 cut(s) | 1908, 2606 |
| BspCNI | CTCAG | 2 cut(s) | 1782, 2626 |
| BspDI | ATCGAT | 1 cut(s) | 2193 |
| BspEI | TCCGGA | 1 cut(s) | 2362 |
| BspHI | TCATGA | 2 cut(s) | 214, 1516 |
| BspLI | GGNNCC | 2 cut(s) | 1356, 1955 |
| BspMAI | CTGCAG | 1 cut(s) | 2311 |
| BspMI | ACCTGC | 1 cut(s) | 1258 |
| BspPI | GGATC | 4 cut(s) | 443, 801, 2080, 2480 |
| BspQI | GCTCTTC | 1 cut(s) | 520 |
| BspTNI | GGTCTC | 1 cut(s) | 1892 |
| BsrDI | GCAATG | 3 cut(s) | 18, 1274, 2443 |
| BsrFI | RCCGGY | 1 cut(s) | 2655 |
| BsrGI | TGTACA | 1 cut(s) | 657 |
| BsrI | ACTGG | 4 cut(s) | 246, 582, 2118, 2124 |
| BssAI | RCCGGY | 1 cut(s) | 2655 |
| BssECI | CCNNGG | 3 cut(s) | 72, 1902, 2291 |
| BssNI | GRCGYC | 1 cut(s) | 2020 |
| BssSI | CACGAG | 1 cut(s) | 453 |
| BssT1I | CCWWGG | 3 cut(s) | 72, 1902, 2291 |
| Bst2BI | CACGAG | 1 cut(s) | 453 |
| Bst4CI | ACNGT | 6 cut(s) | 284, 414, 1156, 1343, 1440, 1558 |
| Bst6I | CTCTTC | 3 cut(s) | 520, 2076, 2472 |
| BstACI | GRCGYC | 1 cut(s) | 2020 |
| BstAPI | GCANNNNNTGC | 3 cut(s) | 83, 2440, 2502 |
| BstAUI | TGTACA | 1 cut(s) | 657 |
| BstC8I | GCNNGC | 4 cut(s) | 13, 1166, 1758, 2147 |
| BstDEI | CTNAG | 4 cut(s) | 232, 824, 1769, 2634 |
| BstF5I | GGATG | 5 cut(s) | 151, 492, 787, 1047, 2060 |
| BstH2I | RGCGCY | 2 cut(s) | 1084, 1763 |
| BstHHI | GCGC | 3 cut(s) | 460, 1083, 1762 |
| BstMAI | GTCTC | 7 cut(s) | 349, 403, 683, 715, 1463, 1892, 1938 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 53, 83, 103, 2180, 2293, 2440, 2502 |
| BstNSI | RCATGY | 9 cut(s) | 56, 1003, 1039, 1168, 1222, 1392, 1601, 1734, 2183 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1600 |
| BstSFI | CTRYAG | 3 cut(s) | 1155, 2307, 2318 |
| BstSLI | GKGCMC | 2 cut(s) | 88, 474 |
| BstV1I | GCAGC | 5 cut(s) | 27, 745, 1090, 1872, 2489 |
| BstV2I | GAAGAC | 3 cut(s) | 1733, 1833, 2237 |
| BstX2I | RGATCY | 7 cut(s) | 66, 448, 793, 1451, 1474, 1765, 2085 |
| BstYI | RGATCY | 7 cut(s) | 66, 448, 793, 1451, 1474, 1765, 2085 |
| Bsu15I | ATCGAT | 1 cut(s) | 2193 |
| BsuI | GTATCC | 1 cut(s) | 1370 |
| BsuRI | GGCC | 2 cut(s) | 1908, 2606 |
| BsuTUI | ATCGAT | 1 cut(s) | 2193 |
| BtrI | CACGTC | 1 cut(s) | 2546 |
| BtsCI | GGATG | 5 cut(s) | 151, 492, 787, 1047, 2060 |
| BtsIMutI | CAGTG | 8 cut(s) | 570, 589, 1348, 1539, 1554, 1777, 2111, 2625 |
| BveI | ACCTGC | 1 cut(s) | 1258 |
| Cac8I | GCNNGC | 4 cut(s) | 13, 1166, 1758, 2147 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2502 |
| CciI | TCATGA | 2 cut(s) | 214, 1516 |
| CfoI | GCGC | 3 cut(s) | 460, 1083, 1762 |
| Cfr10I | RCCGGY | 1 cut(s) | 2655 |
| Cfr13I | GGNCC | 3 cut(s) | 767, 1906, 2234 |
| ClaI | ATCGAT | 1 cut(s) | 2193 |
| CseI | GACGC | 3 cut(s) | 1931, 2028, 2576 |
| Csp6I | GTAC | 4 cut(s) | 305, 658, 1549, 2109 |
| CspAI | ACCGGT | 1 cut(s) | 2655 |
| CspCI | CAANNNNNGTGG | 8 cut(s) | 239, 274, 1013, 1048, 1269, 1304, 1515, 1550 |
| CviQI | GTAC | 4 cut(s) | 305, 658, 1549, 2109 |
| DdeI | CTNAG | 4 cut(s) | 232, 824, 1769, 2634 |
| DraI | TTTAAA | 3 cut(s) | 909, 1063, 1498 |
| EaeI | YGGCCR | 1 cut(s) | 2604 |
| Eam1104I | CTCTTC | 3 cut(s) | 520, 2076, 2472 |
| EarI | CTCTTC | 3 cut(s) | 520, 2076, 2472 |
| Ecl136II | GAGCTC | 1 cut(s) | 97 |
| Eco130I | CCWWGG | 3 cut(s) | 72, 1902, 2291 |
| Eco24I | GRGCYC | 1 cut(s) | 99 |
| Eco31I | GGTCTC | 1 cut(s) | 1892 |
| Eco32I | GATATC | 1 cut(s) | 859 |
| Eco47I | GGWCC | 2 cut(s) | 767, 2234 |
| Eco47III | AGCGCT | 1 cut(s) | 1082 |
| Eco53kI | GAGCTC | 1 cut(s) | 97 |
| Eco57I | CTGAAG | 2 cut(s) | 465, 2195 |
| Eco88I | CYCGRG | 3 cut(s) | 140, 1738, 2387 |
| EcoICRI | GAGCTC | 1 cut(s) | 97 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2234 |
| EcoRV | GATATC | 1 cut(s) | 859 |
| EcoT14I | CCWWGG | 3 cut(s) | 72, 1902, 2291 |
| EcoT22I | ATGCAT | 3 cut(s) | 1005, 1276, 1736 |
| EcoT38I | GRGCYC | 1 cut(s) | 99 |
| ErhI | CCWWGG | 3 cut(s) | 72, 1902, 2291 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 545, 577, 807, 839 |
| FaqI | GGGAC | 1 cut(s) | 1554 |
| FauI | CCCGC | 2 cut(s) | 1749, 1906 |
| FauNDI | CATATG | 1 cut(s) | 1416 |
| FbaI | TGATCA | 1 cut(s) | 1959 |
| FblI | GTMKAC | 1 cut(s) | 276 |
| Fnu4HI | GCNGC | 6 cut(s) | 16, 759, 1079, 1886, 2432, 2503 |
| FokI | GGATG | 5 cut(s) | 158, 499, 794, 1034, 2067 |
| FriOI | GRGCYC | 1 cut(s) | 99 |
| Fsp4HI | GCNGC | 6 cut(s) | 16, 759, 1079, 1886, 2432, 2503 |
| FspBI | CTAG | 9 cut(s) | 44, 134, 335, 386, 1449, 1511, 1575, 1692, 1763 |
| GlaI | GCGC | 3 cut(s) | 459, 1082, 1761 |
| GluI | GCNGC | 6 cut(s) | 16, 759, 1079, 1886, 2432, 2503 |
| GsuI | CTGGAG | 1 cut(s) | 565 |
| HaeII | RGCGCY | 2 cut(s) | 1084, 1763 |
| HaeIII | GGCC | 2 cut(s) | 1908, 2606 |
| HapII | CCGG | 2 cut(s) | 2363, 2656 |
| HgaI | GACGC | 3 cut(s) | 1931, 2028, 2576 |
| HhaI | GCGC | 3 cut(s) | 460, 1083, 1762 |
| Hin1I | GRCGYC | 1 cut(s) | 2020 |
| Hin6I | GCGC | 3 cut(s) | 458, 1081, 1760 |
| HinP1I | GCGC | 3 cut(s) | 458, 1081, 1760 |
| HincII | GTYRAC | 1 cut(s) | 277 |
| HindII | GTYRAC | 1 cut(s) | 277 |
| HindIII | AAGCTT | 2 cut(s) | 1862, 2207 |
| HinfI | GANTC | 9 cut(s) | 328, 592, 866, 872, 988, 1649, 1711, 1743, 2303 |
| HpaII | CCGG | 2 cut(s) | 2363, 2656 |
| HphI | GGTGA | 5 cut(s) | 91, 164, 2017, 2534, 2563 |
| Hpy166II | GTNNAC | 5 cut(s) | 277, 472, 658, 1313, 2111 |
| Hpy188I | TCNGA | 4 cut(s) | 871, 1208, 1970, 2338 |
| Hpy8I | GTNNAC | 5 cut(s) | 277, 472, 658, 1313, 2111 |
| Hpy99I | CGWCG | 1 cut(s) | 2570 |
| HpyAV | CCTTC | 4 cut(s) | 1007, 2045, 2114, 2225 |
| HpyCH4III | ACNGT | 6 cut(s) | 284, 414, 1156, 1343, 1440, 1558 |
| HpyCH4IV | ACGT | 4 cut(s) | 30, 219, 1997, 2545 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 53, 83, 103, 2180, 2293, 2440, 2502 |
| HpyF3I | CTNAG | 4 cut(s) | 232, 824, 1769, 2634 |
| HpySE526I | ACGT | 4 cut(s) | 30, 219, 1997, 2545 |
| Hsp92I | GRCGYC | 1 cut(s) | 2020 |
| HspAI | GCGC | 3 cut(s) | 458, 1081, 1760 |
| Kpn2I | TCCGGA | 1 cut(s) | 2362 |
| Ksp22I | TGATCA | 1 cut(s) | 1959 |
| LguI | GCTCTTC | 1 cut(s) | 520 |
| LmnI | GCTCC | 4 cut(s) | 929, 1075, 1161, 1789 |
| Lsp1109I | GCAGC | 5 cut(s) | 27, 745, 1090, 1872, 2489 |
| LweI | GCATC | 4 cut(s) | 136, 565, 1261, 1743 |
| MaeI | CTAG | 9 cut(s) | 44, 134, 335, 386, 1449, 1511, 1575, 1692, 1763 |
| MaeII | ACGT | 4 cut(s) | 30, 219, 1997, 2545 |
| MaeIII | GTNAC | 2 cut(s) | 883, 1919 |
| MfeI | CAATTG | 2 cut(s) | 888, 1146 |
| MflI | RGATCY | 7 cut(s) | 66, 448, 793, 1451, 1474, 1765, 2085 |
| MhlI | GDGCHC | 5 cut(s) | 88, 99, 141, 474, 1372 |
| MlyI | GAGTC | 1 cut(s) | 881 |
| MmeI | TCCRAC | 1 cut(s) | 831 |
| Mph1103I | ATGCAT | 3 cut(s) | 1005, 1276, 1736 |
| MroI | TCCGGA | 1 cut(s) | 2362 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1590 |
| MspI | CCGG | 2 cut(s) | 2363, 2656 |
| MunI | CAATTG | 2 cut(s) | 888, 1146 |
| Mva1269I | GAATGC | 3 cut(s) | 1003, 2147, 2414 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 53, 83, 103, 2180, 2293, 2440, 2502 |
| NdeI | CATATG | 1 cut(s) | 1416 |
| NlaIV | GGNNCC | 2 cut(s) | 1356, 1955 |
| NmuCI | GTSAC | 2 cut(s) | 883, 1919 |
| NsiI | ATGCAT | 3 cut(s) | 1005, 1276, 1736 |
| NspI | RCATGY | 9 cut(s) | 56, 1003, 1039, 1168, 1222, 1392, 1601, 1734, 2183 |
| PaeI | GCATGC | 1 cut(s) | 1168 |
| PaeR7I | CTCGAG | 3 cut(s) | 140, 1738, 2387 |
| PagI | TCATGA | 2 cut(s) | 214, 1516 |
| PciI | ACATGT | 2 cut(s) | 1218, 1597 |
| PciSI | GCTCTTC | 1 cut(s) | 520 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2199 |
| PctI | GAATGC | 3 cut(s) | 1003, 2147, 2414 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1590 |
| PfeI | GAWTC | 8 cut(s) | 328, 592, 866, 988, 1649, 1711, 1743, 2303 |
| PinAI | ACCGGT | 1 cut(s) | 2655 |
| PkrI | GCNGC | 6 cut(s) | 17, 760, 1080, 1887, 2433, 2504 |
| PleI | GAGTC | 1 cut(s) | 880 |
| PpsI | GAGTC | 1 cut(s) | 880 |
| PpuMI | RGGWCCY | 1 cut(s) | 2234 |
| PscI | ACATGT | 2 cut(s) | 1218, 1597 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1600 |
| PshBI | ATTAAT | 2 cut(s) | 737, 753 |
| PsiI | TTATAA | 1 cut(s) | 953 |
| Psp124BI | GAGCTC | 1 cut(s) | 99 |
| Psp5II | RGGWCCY | 1 cut(s) | 2234 |
| PspN4I | GGNNCC | 2 cut(s) | 1356, 1955 |
| PspPI | GGNCC | 3 cut(s) | 767, 1906, 2234 |
| PspPPI | RGGWCCY | 1 cut(s) | 2234 |
| PspXI | VCTCGAGB | 2 cut(s) | 140, 2387 |
| PstI | CTGCAG | 1 cut(s) | 2311 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2502 |
| PsuI | RGATCY | 7 cut(s) | 66, 448, 793, 1451, 1474, 1765, 2085 |
| RsaI | GTAC | 4 cut(s) | 306, 659, 1550, 2110 |
| RsaNI | GTAC | 4 cut(s) | 305, 658, 1549, 2109 |
| SacI | GAGCTC | 1 cut(s) | 99 |
| SalI | GTCGAC | 1 cut(s) | 275 |
| SapI | GCTCTTC | 1 cut(s) | 520 |
| SatI | GCNGC | 6 cut(s) | 16, 759, 1079, 1886, 2432, 2503 |
| Sau96I | GGNCC | 3 cut(s) | 767, 1906, 2234 |
| ScaI | AGTACT | 1 cut(s) | 1550 |
| SchI | GAGTC | 1 cut(s) | 881 |
| SduI | GDGCHC | 5 cut(s) | 88, 99, 141, 474, 1372 |
| SfaNI | GCATC | 4 cut(s) | 136, 565, 1261, 1743 |
| SfcI | CTRYAG | 3 cut(s) | 1155, 2307, 2318 |
| Sfr274I | CTCGAG | 3 cut(s) | 140, 1738, 2387 |
| SinI | GGWCC | 2 cut(s) | 767, 2234 |
| SlaI | CTCGAG | 3 cut(s) | 140, 1738, 2387 |
| SmlI | CTYRAG | 8 cut(s) | 92, 140, 425, 1658, 1738, 1928, 2238, 2387 |
| SmoI | CTYRAG | 8 cut(s) | 92, 140, 425, 1658, 1738, 1928, 2238, 2387 |
| SpeI | ACTAGT | 3 cut(s) | 133, 334, 385 |
| SphI | GCATGC | 1 cut(s) | 1168 |
| SsiI | CCGC | 4 cut(s) | 1756, 1913, 2172, 2432 |
| SspI | AATATT | 1 cut(s) | 1243 |
| SspMI | CTAG | 9 cut(s) | 44, 134, 335, 386, 1449, 1511, 1575, 1692, 1763 |
| SstI | GAGCTC | 1 cut(s) | 99 |
| StyI | CCWWGG | 3 cut(s) | 72, 1902, 2291 |
| TaaI | ACNGT | 6 cut(s) | 284, 414, 1156, 1343, 1440, 1558 |
| TaiI | ACGT | 4 cut(s) | 33, 222, 2000, 2548 |
| TatI | WGTACW | 2 cut(s) | 657, 1548 |
| TauI | GCSGC | 1 cut(s) | 2434 |
| TfiI | GAWTC | 8 cut(s) | 328, 592, 866, 988, 1649, 1711, 1743, 2303 |
| TscAI | CASTG | 8 cut(s) | 577, 589, 1348, 1539, 1561, 1777, 2118, 2632 |
| TseFI | GTSAC | 2 cut(s) | 883, 1919 |
| TseI | GCWGC | 5 cut(s) | 15, 758, 1078, 1885, 2502 |
| Tsp45I | GTSAC | 2 cut(s) | 883, 1919 |
| TspRI | CASTG | 8 cut(s) | 577, 589, 1348, 1539, 1561, 1777, 2118, 2632 |
| VneI | GTGCAC | 1 cut(s) | 470 |
| VpaK11BI | GGWCC | 2 cut(s) | 767, 2234 |
| VspI | ATTAAT | 2 cut(s) | 737, 753 |
| XapI | RAATTY | 3 cut(s) | 682, 837, 1891 |
| XbaI | TCTAGA | 1 cut(s) | 1448 |
| XceI | RCATGY | 9 cut(s) | 56, 1003, 1039, 1168, 1222, 1392, 1601, 1734, 2183 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2599 |
| XhoI | CTCGAG | 3 cut(s) | 140, 1738, 2387 |
| XmiI | GTMKAC | 1 cut(s) | 276 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1590 |
| XspI | CTAG | 9 cut(s) | 44, 134, 335, 386, 1449, 1511, 1575, 1692, 1763 |
| ZrmI | AGTACT | 1 cut(s) | 1550 |
| Zsp2I | ATGCAT | 3 cut(s) | 1005, 1276, 1736 |