Rmu_sc0004888.1_g000054

Belongs to the disease resistance NB-LRR family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004888.1
Physical Location & Seq
Forward (+)
276293 .. 278911
2619 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004888.1_g000054.1.cds

Sequence Viewer

Length: 2619 bp
atggagttcgtctacggcattgcagagaacgtcttagcttcacatgcttcccaggagatctccttggcatggggtgcccaacttgaactcaccaagctcaacaagaccttatctaccatcaaactagtactcgaagatgcagagaagaagcaagtgaggaatcccctaatcactcattggttgggaaatctcaaagatgtttgccatgacgttgatgatgtccttgacgaactagagttccaaaagctgcggaagaaagttctggtcaacaaccgtgggagtgtcaaaggacaggtacgccaatttttttcgcgttggaatccagttgtgtttaacttcaagctgggacataaagtgaaagaaattagagaacgactagttgaaattgataatgaaaagagagagtttgctctccttgaggttgctaagatagctgaagatcatcatgtggcccaagggaagcatgataatgacagagagactgactctttggtggaggcttcagatgttattgggagagatgatgataaaaaacagattattagccatctcttaaataactctgatatctctagtgaggagaatgtttctgttatttccatccttgggttaggagggttgggaaaaacaactcttgctaaattagtgtataacatggtggaggagaattttgagatgaaaatgtggatatgtgtctcagaaaactttgatatccgaacattaatttgtggcattatcaatgctgcaatgaaacaaaaatgtgaggatgaaattttggaccttatgaaaagaaggttgcaagatattttgagaggtagaaaatttttgttagtgttagatgatgtttgggatacggagtggattggagtaacaactgaaaaatggagtagtttaaaaaatgtgttaaatgtgggagctcatggaagcaaagtcatcataacaacaagaaataaatcagttgctttattagtgaatcccttatacacgcattctttagaaggtcttttccataaagattgcatgtctttgttcatcaaaagggcgtttaatagggggcattctttagaaagtcttccccaacatttgataaaaattggagaggatattgtgaagaagtgtggaggagttcctttagcagtagctactatagggagcatgctctatttgaaaacagatgaacaccaatggttgagtgtcagagatgatgacatgtggagcataaggaatgacaatattctacctgcactcaaattgagctatgatgcattgccacaacacttgaaaccgtgttttgcattttgttcactttttccaaaggattttgaattcaacagtgcaatgttggtttcactgtggacagcacaaggatacctcaagacatctaagaaaaatgaagattatgaacagatgggtgtagactatataagggagttttgctctagatctttgtttcaagtcgagtgggatctcaaaacagccatacattttaaaatacatgatctagttcatgatttagcaatttcggtggcacaagttgagtactccaccgtcaattgtcgtccctctagtgctttggaaagggttcgacatgtgtcaatattggaaaaggacttgcttggagaagaggcactagttcccgatttcatgctcaagtcaaagaaattgcgaaccattcaaattactagatatgtcgagataaatcaatattttgtgaagacatgcatctcgaggttcaaatatctgcgggtgctagatctcggtgggtcgcctcttgaggagctaccaagttccaccggtagtttgtttcatttgagattgctcgacttgtctggtaattggaagataaaaaggcttcccaattccatcagtaagctgctgaatttggagagcttgtccctttggggttgttacgcacttgaggagatacccaaagacataggaaacctgatcaacctccgaagcttggagataactacacaacagaagtatttgccaaaaggaattaaacgcctcaccaaccttcaatatgtaagttttcaaggatgtgtcaatcttaaatcgttgggcgaagagatccaattcctcaaccaccttcgcaaattgttgattggcagttgtaataatttggaatgcttgccaccaaatatgaaacacatgactgctttagatactttgggtgtcggtgatttgatgatgagatcaggggaaggtcctcaacgtcttcgatcactgattatcgagagatcaagtttggaggcgttgcccccttggctcattgaagattctgcagacactctacagagcatagcacttggtgaatgtcataatctcacggcacttccggagttgataaagttcagattcctcgagcaactacgcattgcagaatgctccaaattgtcggctttgccccaggagttgcattgccttactgagttgagagaattggagatttcagggtgtcctgaattgagcaaaagctgcaaaaggcaattaaaaggtgaggagtggtcaaagatggcacgtcaggtgaagattacactcgacgactctgatgatgaagccgacaatcgcttggccgacggtacgatcgcgtaccacacgcgacgacgccgttag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

872

Amino Acids

99.53

Weight (kDa)

6.61

Isoelectric Point (pI)

40.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1249
AccB1I GGYRCC 1 cut(s) 74
AccI GTMKAC 2 cut(s) 12, 1416
AccII CGCG 3 cut(s) 313, 2594, 2605
AccIII TCCGGA 1 cut(s) 2341
AciI CCGC 2 cut(s) 250, 1744
AclWI GGATC 2 cut(s) 1473, 2068
AcoI YGGCCR 1 cut(s) 2577
AcsI RAATTY 5 cut(s) 667, 771, 821, 1325, 1879
AcuI CTGAAG 2 cut(s) 456, 486
AcyI GRCGYC 1 cut(s) 2611
AdeI CACNNNGTG 1 cut(s) 2315
AfaI GTAC 5 cut(s) 129, 297, 1541, 2587, 2597
AfiI CCNNNNNNNGG 3 cut(s) 69, 606, 1963
AflIII ACRYGT 2 cut(s) 1209, 1588
AgeI ACCGGT 1 cut(s) 1793
AhlI ACTAGT 3 cut(s) 124, 376, 1630
AjiI CACGTC 1 cut(s) 2525
AjnI CCWGG 2 cut(s) 51, 2412
AloI GAACNNNNNNTCC 2 cut(s) 222, 254
Alw21I GWGCWC 1 cut(s) 919
Alw26I GTCTC 2 cut(s) 473, 700
AlwI GGATC 2 cut(s) 1473, 2068
Ama87I CYCGRG 2 cut(s) 1726, 2366
Aor13HI TCCGGA 1 cut(s) 2341
AoxI GGCC 2 cut(s) 450, 2577
ApeKI GCWGC 4 cut(s) 247, 743, 1873, 2481
ApoI RAATTY 5 cut(s) 667, 771, 821, 1325, 1879
ArsI GACNNNNNNTTYG 2 cut(s) 472, 504
AseI ATTAAT 1 cut(s) 722
AsiGI ACCGGT 1 cut(s) 1793
Asp700I GAANNNNTTC 2 cut(s) 1071, 1581
AspS9I GGNCC 3 cut(s) 451, 778, 2210
AsuHPI GGTGA 6 cut(s) 82, 2005, 2195, 2327, 2513, 2542
AvaI CYCGRG 2 cut(s) 1726, 2366
AvaII GGWCC 2 cut(s) 778, 2210
BaeGI GKGCMC 1 cut(s) 79
BanI GGYRCC 1 cut(s) 74
BanII GRGCYC 1 cut(s) 919
BbsI GAAGAC 3 cut(s) 1064, 1721, 2213
Bbv12I GWGCWC 1 cut(s) 919
BbvI GCAGC 4 cut(s) 234, 730, 1860, 2468
BccI CCATC 6 cut(s) 125, 555, 608, 1402, 1871, 2512
BceAI ACGGC 3 cut(s) 31, 2349, 2598
BciT130I CCWGG 2 cut(s) 53, 2414
BciVI GTATCC 2 cut(s) 844, 1361
BclI TGATCA 1 cut(s) 1947
BcoDI GTCTC 2 cut(s) 473, 700
BcuI ACTAGT 3 cut(s) 124, 376, 1630
BfmI CTRYAG 3 cut(s) 1146, 2286, 2297
BfuAI ACCTGC 1 cut(s) 1249
BfuI GTATCC 2 cut(s) 844, 1361
BglI GCCNNNNNGGC 1 cut(s) 2269
BglII AGATCT 3 cut(s) 57, 1442, 1753
BisI GCNGC 4 cut(s) 248, 744, 1874, 2482
BlsI GCNGC 4 cut(s) 249, 745, 1875, 2483
BmcAI AGTACT 2 cut(s) 129, 1541
Bme1390I CCNGG 2 cut(s) 53, 2414
Bme18I GGWCC 2 cut(s) 778, 2210
BmeT110I CYCGRG 2 cut(s) 1726, 2366
BmgBI CACGTC 1 cut(s) 2525
BmgT120I GGNCC 3 cut(s) 451, 778, 2210
BmiI GGNNCC 1 cut(s) 76
BmrFI CCNGG 2 cut(s) 53, 2414
BmsI GCATC 3 cut(s) 127, 1252, 1731
BoxI GACNNNNGTC 1 cut(s) 1591
BpiI GAAGAC 3 cut(s) 1064, 1721, 2213
BplI GAGNNNNNCTC 4 cut(s) 470, 502, 1421, 1453
BpuEI CTTGAG 5 cut(s) 437, 1358, 1634, 1793, 1937
BsaHI GRCGYC 1 cut(s) 2611
BsaJI CCNNGG 7 cut(s) 51, 63, 274, 454, 604, 2267, 2412
BsaWI WCCGGW 2 cut(s) 1793, 2341
BsaXI ACNNNNNCTCC 2 cut(s) 1877, 1907
Bsc4I CCNNNNNNNGG 3 cut(s) 69, 606, 1963
Bse118I RCCGGY 1 cut(s) 1793
Bse1I ACTGG 1 cut(s) 323
Bse3DI GCAATG 6 cut(s) 18, 753, 1265, 1344, 2379, 2422
BseAI TCCGGA 1 cut(s) 2341
BseBI CCWGG 2 cut(s) 53, 2414
BseDI CCNNGG 7 cut(s) 51, 63, 274, 454, 604, 2267, 2412
BseGI GGATG 3 cut(s) 600, 772, 2048
BseLI CCNNNNNNNGG 3 cut(s) 69, 606, 1963
BseMI GCAATG 6 cut(s) 18, 753, 1265, 1344, 2379, 2422
BseMII CTCAG 2 cut(s) 711, 2424
BseNI ACTGG 1 cut(s) 323
BseRI GAGGAG 6 cut(s) 593, 677, 1137, 1790, 1934, 2519
BseSI GKGCMC 1 cut(s) 79
BseXI GCAGC 4 cut(s) 234, 730, 1860, 2468
BseYI CCCAGC 1 cut(s) 343
BsgI GTGCAG 1 cut(s) 1227
Bsh1236I CGCG 3 cut(s) 313, 2594, 2605
Bsh1285I CGRYCG 1 cut(s) 2592
BshFI GGCC 2 cut(s) 452, 2579
BshNI GGYRCC 1 cut(s) 74
BshTI ACCGGT 1 cut(s) 1793
BsiEI CGRYCG 1 cut(s) 2592
BsiHKAI GWGCWC 1 cut(s) 919
BsiHKCI CYCGRG 2 cut(s) 1726, 2366
BsiSI CCGG 2 cut(s) 1794, 2342
BslFI GGGAC 3 cut(s) 360, 1545, 1879
BslI CCNNNNNNNGG 3 cut(s) 69, 606, 1963
BsmAI GTCTC 2 cut(s) 473, 700
BsmFI GGGAC 3 cut(s) 360, 1545, 1879
BsmI GAATGC 4 cut(s) 988, 1057, 2135, 2393
BsnI GGCC 2 cut(s) 452, 2579
BsoBI CYCGRG 2 cut(s) 1726, 2366
Bsp1286I GDGCHC 2 cut(s) 79, 919
Bsp13I TCCGGA 1 cut(s) 2341
BspACI CCGC 2 cut(s) 250, 1744
BspANI GGCC 2 cut(s) 452, 2579
BspCNI CTCAG 2 cut(s) 710, 2425
BspEI TCCGGA 1 cut(s) 2341
BspFNI CGCG 3 cut(s) 313, 2594, 2605
BspHI TCATGA 1 cut(s) 1507
BspLI GGNNCC 1 cut(s) 76
BspMAI CTGCAG 1 cut(s) 2290
BspMI ACCTGC 1 cut(s) 1249
BspPI GGATC 2 cut(s) 1473, 2068
BspT107I GGYRCC 1 cut(s) 74
BsrDI GCAATG 6 cut(s) 18, 753, 1265, 1344, 2379, 2422
BsrFI RCCGGY 1 cut(s) 1793
BsrI ACTGG 1 cut(s) 323
BssAI RCCGGY 1 cut(s) 1793
BssECI CCNNGG 7 cut(s) 51, 63, 274, 454, 604, 2267, 2412
BssNI GRCGYC 1 cut(s) 2611
BssT1I CCWWGG 4 cut(s) 63, 454, 604, 2267
Bst2UI CCWGG 2 cut(s) 53, 2414
Bst4CI ACNGT 6 cut(s) 275, 1287, 1334, 1353, 1549, 2585
Bst6I CTCTTC 2 cut(s) 1617, 2064
BstACI GRCGYC 1 cut(s) 2611
BstAPI GCANNNNNTGC 2 cut(s) 74, 2481
BstC8I GCNNGC 2 cut(s) 1157, 2135
BstDEI CTNAG 5 cut(s) 34, 426, 697, 1383, 2433
BstDSI CCRYGG 1 cut(s) 274
BstF5I GGATG 3 cut(s) 600, 772, 2048
BstFNI CGCG 3 cut(s) 313, 2594, 2605
BstMAI GTCTC 2 cut(s) 473, 700
BstMCI CGRYCG 1 cut(s) 2592
BstMWI GCNNNNNNNGC 5 cut(s) 44, 74, 431, 2269, 2481
BstNI CCWGG 2 cut(s) 53, 2414
BstNSI RCATGY 6 cut(s) 47, 1024, 1159, 1213, 1592, 1722
BstPAI GACNNNNGTC 1 cut(s) 1591
BstSCI CCNGG 2 cut(s) 51, 2412
BstSFI CTRYAG 3 cut(s) 1146, 2286, 2297
BstSLI GKGCMC 1 cut(s) 79
BstUI CGCG 3 cut(s) 313, 2594, 2605
BstV1I GCAGC 4 cut(s) 234, 730, 1860, 2468
BstV2I GAAGAC 3 cut(s) 1064, 1721, 2213
BstX2I RGATCY 5 cut(s) 57, 1442, 1465, 1753, 2073
BstYI RGATCY 5 cut(s) 57, 1442, 1465, 1753, 2073
BsuI GTATCC 2 cut(s) 844, 1361
BsuRI GGCC 2 cut(s) 452, 2579
BtgI CCRYGG 1 cut(s) 274
BtrI CACGTC 1 cut(s) 2525
BtsCI GGATG 3 cut(s) 600, 772, 2048
BtsIMutI CAGTG 3 cut(s) 1339, 1349, 2228
BveI ACCTGC 1 cut(s) 1249
Cac8I GCNNGC 2 cut(s) 1157, 2135
CciI TCATGA 1 cut(s) 1507
Cfr10I RCCGGY 1 cut(s) 1793
Cfr13I GGNCC 3 cut(s) 451, 778, 2210
Csp6I GTAC 5 cut(s) 128, 296, 1540, 2586, 2596
CspAI ACCGGT 1 cut(s) 1793
CspCI CAANNNNNGTGG 8 cut(s) 256, 291, 1260, 1295, 1442, 1477, 1506, 1541
CviQI GTAC 5 cut(s) 128, 296, 1540, 2586, 2596
DdeI CTNAG 5 cut(s) 34, 426, 697, 1383, 2433
DraI TTTAAA 2 cut(s) 894, 1489
DraIII CACNNNGTG 1 cut(s) 2315
EaeI YGGCCR 1 cut(s) 2577
Eam1104I CTCTTC 2 cut(s) 1617, 2064
EarI CTCTTC 2 cut(s) 1617, 2064
Ecl136II GAGCTC 1 cut(s) 917
Eco130I CCWWGG 4 cut(s) 63, 454, 604, 2267
Eco24I GRGCYC 1 cut(s) 919
Eco32I GATATC 2 cut(s) 568, 712
Eco47I GGWCC 2 cut(s) 778, 2210
Eco53kI GAGCTC 1 cut(s) 917
Eco57I CTGAAG 2 cut(s) 456, 486
Eco88I CYCGRG 2 cut(s) 1726, 2366
EcoICRI GAGCTC 1 cut(s) 917
EcoO109I RGGNCCY 1 cut(s) 2210
EcoRI GAATTC 1 cut(s) 1325
EcoRII CCWGG 2 cut(s) 51, 2412
EcoRV GATATC 2 cut(s) 568, 712
EcoT14I CCWWGG 4 cut(s) 63, 454, 604, 2267
EcoT22I ATGCAT 2 cut(s) 1267, 1724
EcoT38I GRGCYC 1 cut(s) 919
ErhI CCWWGG 4 cut(s) 63, 454, 604, 2267
FaqI GGGAC 3 cut(s) 360, 1545, 1879
FauI CCCGC 1 cut(s) 1737
FbaI TGATCA 1 cut(s) 1947
FblI GTMKAC 2 cut(s) 12, 1416
Fnu4HI GCNGC 4 cut(s) 248, 744, 1874, 2482
FokI GGATG 3 cut(s) 587, 779, 2055
FriOI GRGCYC 1 cut(s) 919
Fsp4HI GCNGC 4 cut(s) 248, 744, 1874, 2482
GluI GCNGC 4 cut(s) 248, 744, 1874, 2482
GsaI CCCAGC 1 cut(s) 347
HaeIII GGCC 2 cut(s) 452, 2579
HapII CCGG 2 cut(s) 1794, 2342
Hin1I GRCGYC 1 cut(s) 2611
HincII GTYRAC 1 cut(s) 268
HindII GTYRAC 1 cut(s) 268
HindIII AAGCTT 1 cut(s) 1960
HinfI GANTC 7 cut(s) 160, 319, 485, 973, 2282, 2361, 2549
HpaII CCGG 2 cut(s) 1794, 2342
HphI GGTGA 6 cut(s) 82, 2005, 2195, 2327, 2513, 2542
Hpy166II GTNNAC 5 cut(s) 13, 268, 1304, 1356, 1417
Hpy188I TCNGA 8 cut(s) 505, 565, 700, 716, 1199, 1958, 2360, 2554
Hpy8I GTNNAC 5 cut(s) 13, 268, 1304, 1356, 1417
Hpy99I CGWCG 4 cut(s) 2549, 2585, 2610, 2613
HpyAV CCTTC 5 cut(s) 786, 992, 2030, 2102, 2201
HpyCH4III ACNGT 6 cut(s) 275, 1287, 1334, 1353, 1549, 2585
HpyCH4IV ACGT 4 cut(s) 30, 210, 2218, 2524
HpyF10VI GCNNNNNNNGC 5 cut(s) 44, 74, 431, 2269, 2481
HpyF3I CTNAG 5 cut(s) 34, 426, 697, 1383, 2433
HpySE526I ACGT 4 cut(s) 30, 210, 2218, 2524
Hsp92I GRCGYC 1 cut(s) 2611
Kpn2I TCCGGA 1 cut(s) 2341
Ksp22I TGATCA 1 cut(s) 1947
LmnI GCTCC 5 cut(s) 914, 1152, 1215, 1777, 2396
Lsp1109I GCAGC 4 cut(s) 234, 730, 1860, 2468
LweI GCATC 3 cut(s) 127, 1252, 1731
MaeII ACGT 4 cut(s) 30, 210, 2218, 2524
MaeIII GTNAC 2 cut(s) 868, 1907
MfeI CAATTG 1 cut(s) 1552
MflI RGATCY 5 cut(s) 57, 1442, 1465, 1753, 2073
MhlI GDGCHC 2 cut(s) 79, 919
MlyI GAGTC 2 cut(s) 479, 2543
MmeI TCCRAC 1 cut(s) 296
Mph1103I ATGCAT 2 cut(s) 1267, 1724
MroI TCCGGA 1 cut(s) 2341
MroXI GAANNNNTTC 2 cut(s) 1071, 1581
MslI CAYNNNNRTG 1 cut(s) 468
MspI CCGG 2 cut(s) 1794, 2342
MspR9I CCNGG 2 cut(s) 53, 2414
MunI CAATTG 1 cut(s) 1552
Mva1269I GAATGC 4 cut(s) 988, 1057, 2135, 2393
MvaI CCWGG 2 cut(s) 53, 2414
MvnI CGCG 3 cut(s) 313, 2594, 2605
MwoI GCNNNNNNNGC 5 cut(s) 44, 74, 431, 2269, 2481
NlaIV GGNNCC 1 cut(s) 76
NsiI ATGCAT 2 cut(s) 1267, 1724
NspI RCATGY 6 cut(s) 47, 1024, 1159, 1213, 1592, 1722
PaeI GCATGC 1 cut(s) 1159
PaeR7I CTCGAG 2 cut(s) 1726, 2366
PagI TCATGA 1 cut(s) 1507
PciI ACATGT 2 cut(s) 1209, 1588
PctI GAATGC 4 cut(s) 988, 1057, 2135, 2393
PdmI GAANNNNTTC 2 cut(s) 1071, 1581
PfeI GAWTC 5 cut(s) 160, 319, 973, 2282, 2361
PinAI ACCGGT 1 cut(s) 1793
PkrI GCNGC 4 cut(s) 249, 745, 1875, 2483
Ple19I CGATCG 1 cut(s) 2592
PleI GAGTC 2 cut(s) 479, 2543
PpsI GAGTC 2 cut(s) 479, 2543
PpuMI RGGWCCY 1 cut(s) 2210
PscI ACATGT 2 cut(s) 1209, 1588
PshAI GACNNNNGTC 1 cut(s) 1591
PshBI ATTAAT 1 cut(s) 722
Psp124BI GAGCTC 1 cut(s) 919
Psp5II RGGWCCY 1 cut(s) 2210
Psp6I CCWGG 2 cut(s) 51, 2412
PspFI CCCAGC 1 cut(s) 343
PspGI CCWGG 2 cut(s) 51, 2412
PspN4I GGNNCC 1 cut(s) 76
PspPI GGNCC 3 cut(s) 451, 778, 2210
PspPPI RGGWCCY 1 cut(s) 2210
PspXI VCTCGAGB 1 cut(s) 2366
PstI CTGCAG 1 cut(s) 2290
PsuI RGATCY 5 cut(s) 57, 1442, 1465, 1753, 2073
PvuI CGATCG 1 cut(s) 2592
RsaI GTAC 5 cut(s) 129, 297, 1541, 2587, 2597
RsaNI GTAC 5 cut(s) 128, 296, 1540, 2586, 2596
RseI CAYNNNNRTG 1 cut(s) 468
SacI GAGCTC 1 cut(s) 919
SatI GCNGC 4 cut(s) 248, 744, 1874, 2482
Sau96I GGNCC 3 cut(s) 451, 778, 2210
ScaI AGTACT 2 cut(s) 129, 1541
SchI GAGTC 2 cut(s) 479, 2543
ScrFI CCNGG 2 cut(s) 53, 2414
SduI GDGCHC 2 cut(s) 79, 919
SfaNI GCATC 3 cut(s) 127, 1252, 1731
SfcI CTRYAG 3 cut(s) 1146, 2286, 2297
Sfr274I CTCGAG 2 cut(s) 1726, 2366
SinI GGWCC 2 cut(s) 778, 2210
SlaI CTCGAG 2 cut(s) 1726, 2366
SmiMI CAYNNNNRTG 1 cut(s) 468
SmlI CTYRAG 7 cut(s) 416, 1373, 1649, 1726, 1772, 1916, 2366
SmoI CTYRAG 7 cut(s) 416, 1373, 1649, 1726, 1772, 1916, 2366
SpeI ACTAGT 3 cut(s) 124, 376, 1630
SphI GCATGC 1 cut(s) 1159
SsiI CCGC 2 cut(s) 250, 1744
SspI AATATT 3 cut(s) 1234, 1599, 1706
SstI GAGCTC 1 cut(s) 919
StyD4I CCNGG 2 cut(s) 51, 2412
StyI CCWWGG 4 cut(s) 63, 454, 604, 2267
TaaI ACNGT 6 cut(s) 275, 1287, 1334, 1353, 1549, 2585
TaiI ACGT 4 cut(s) 33, 213, 2221, 2527
TatI WGTACW 2 cut(s) 127, 1539
TfiI GAWTC 5 cut(s) 160, 319, 973, 2282, 2361
TscAI CASTG 3 cut(s) 1339, 1356, 2235
TseI GCWGC 4 cut(s) 247, 743, 1873, 2481
TspGWI ACGGA 1 cut(s) 869
TspRI CASTG 3 cut(s) 1339, 1356, 2235
VpaK11BI GGWCC 2 cut(s) 778, 2210
VspI ATTAAT 1 cut(s) 722
XapI RAATTY 5 cut(s) 667, 771, 821, 1325, 1879
XbaI TCTAGA 1 cut(s) 1439
XceI RCATGY 6 cut(s) 47, 1024, 1159, 1213, 1592, 1722
XhoI CTCGAG 2 cut(s) 1726, 2366
XmiI GTMKAC 2 cut(s) 12, 1416
XmnI GAANNNNTTC 2 cut(s) 1071, 1581
ZrmI AGTACT 2 cut(s) 129, 1541
Zsp2I ATGCAT 2 cut(s) 1267, 1724
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.