Rmu_sc0004942.1_g000014

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004942.1
OG0000159
Physical Location & Seq
Forward (+)
53788 .. 55647
1860 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004942.1_g000014.1.cds

Sequence Viewer

Length: 1860 bp
atggagttcgtctacagcatagcagagacagtcttgggtaggctaacttcctatgcttcccaagaagtctccttggcatggggtgccaaccttgagctcaccaagctcaacaagaccttatctgccatcaaattagtactcgaggatgcagagaagaagcaagtgaggaatcccccaatcactcgttggttgagaaatctcaaagatgtttgccatgacgttgatgatgtcttggatgaactggagttccaaaagttgtggttgaaagtggaggtcgacaattgtgggaagatcaaaggaaaggtacggcaatttttttccccttggaatcaagtagtgtttaacttcaaaatgggacataaagtgaaagagattagagaacgactggttgaaattgataatgaaaagagagagtttgctctccttgagattgctaagatagttgaagatcatcgtgcgccccaagggatgcacgataataaaagagagactgactctttagtggagccttcagatgtcattgggagagatgatgataaaaaacagattgttagttatctcttaaataacactgatatctctagtggggagaatgtttcagttatttctatccttgggttaggagggttgggaaagacaactctcgctaaattagtgtataatgatagcatggtagatgagaaatttgagatgaaaatgtggatatgcgtctcagacaactttgatatccaaacatcaattcgcggcattatcagtgctgcaattaaacaaaaatgtgaggatgaaagtttggaccttctgaaaagaagattgcaaggtactttgcgaggtagaagatttttgttagtgttggatgatgtctgggatatggagctgattggaataacgattgaaaaatggaatgatctaaaaggcttgttaaatgtgggagctaatggaagtaaaatcatcataacaacacgacatggatcagttgcttcacttgtgaatcccgtatacatgcaccccttagaaggtcttccccacaaagactgcatctccttgttcatcaaaaaggcatttaaaagaggagaggagcagcgctatccacatttgatagaaattggtgaggatattgtgaagaagtgtcgaggagtacctttagcagtagctactgtagggagcatgctctatttgaaaagagatgaacaccaatggtcgagtgtcagagatgatgacatgtggagcataaggaacgacaatattctacctgcactcaaattgagctatgatgcattgccacaacacttgaaaccgtgtttcgcattttgttcacttttcccaaaggattatgtgttcaagagtccaatgttggtcccattgtggatagcacaaggatacctcaagacatctaagaagaatgaagattttgaacagatcggtttagactatataagggagttttgctctagatctttgtttcaagtcgagggggatatcaaaacagccataatttttaaaatacatgatctcattcatgatttagcaatttcagtggcacaagtagagtactccacagttaattgtcgtccctctagtgcttttgaaatggttcgacatgtgtcaatatcgaaaaatgacttgcttggaaaagaggtacaagttcccgatttcatactaaagtctaagaaattacgaactattctaattcctgaagaaggtcagatgagtccacgttttgtgaagacatgcatctcgagatttaagtatatgcgggtgctagatctcagtgggtcgcctcttgaggagctaccaagttccattggtagtttgtttcatctgagatatctcgacttgtcttcaagatacccaaagacatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

619

Amino Acids

70.81

Weight (kDa)

7.56

Isoelectric Point (pI)

39.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1258
AccB1I GGYRCC 1 cut(s) 83
AccI GTMKAC 3 cut(s) 12, 276, 996
AccII CGCG 1 cut(s) 744
AciI CCGC 2 cut(s) 744, 1753
AclWI GGATC 1 cut(s) 976
AcsI RAATTY 1 cut(s) 683
AcuI CTGAAG 2 cut(s) 495, 1713
AfaI GTAC 6 cut(s) 138, 306, 820, 1137, 1550, 1638
AfeI AGCGCT 1 cut(s) 1082
AfiI CCNNNNNNNGG 3 cut(s) 78, 1013, 1697
AflIII ACRYGT 2 cut(s) 1218, 1597
AjuI GAANNNNNNNTTGG 2 cut(s) 723, 755
AloI GAACNNNNNNTCC 4 cut(s) 231, 263, 1319, 1351
AluBI AGCT 7 cut(s) 97, 106, 874, 932, 1151, 1266, 1789
AluI AGCT 7 cut(s) 97, 106, 874, 932, 1151, 1266, 1789
Alw21I GWGCWC 1 cut(s) 99
Alw26I GTCTC 4 cut(s) 20, 73, 482, 715
AlwI GGATC 1 cut(s) 976
Ama87I CYCGRG 2 cut(s) 140, 1735
Aor51HI AGCGCT 1 cut(s) 1082
ApeKI GCWGC 2 cut(s) 758, 1078
ApoI RAATTY 1 cut(s) 683
Asp700I GAANNNNTTC 2 cut(s) 1017, 1590
AspLEI GCGC 2 cut(s) 460, 1083
AspS9I GGNCC 2 cut(s) 793, 1354
AsuHPI GGTGA 2 cut(s) 91, 1118
AvaI CYCGRG 2 cut(s) 140, 1735
AvaII GGWCC 2 cut(s) 793, 1354
BanI GGYRCC 1 cut(s) 83
BanII GRGCYC 1 cut(s) 99
BarI GAAGNNNNNNTAC 2 cut(s) 31, 63
BbsI GAAGAC 3 cut(s) 1010, 1730, 1830
Bbv12I GWGCWC 1 cut(s) 99
BbvI GCAGC 2 cut(s) 745, 1090
BccI CCATC 1 cut(s) 134
BceAI ACGGC 1 cut(s) 323
BciVI GTATCC 1 cut(s) 1370
BcoDI GTCTC 4 cut(s) 20, 73, 482, 715
BfaI CTAG 4 cut(s) 582, 1449, 1575, 1760
BfmI CTRYAG 2 cut(s) 13, 1155
BfoI RGCGCY 1 cut(s) 1084
BfuAI ACCTGC 1 cut(s) 1258
BfuI GTATCC 1 cut(s) 1370
BglII AGATCT 2 cut(s) 1451, 1762
BisI GCNGC 3 cut(s) 745, 759, 1079
BlsI GCNGC 3 cut(s) 746, 760, 1080
BmcAI AGTACT 2 cut(s) 138, 1550
Bme18I GGWCC 2 cut(s) 793, 1354
BmeT110I CYCGRG 2 cut(s) 140, 1735
BmgT120I GGNCC 2 cut(s) 793, 1354
BmiI GGNNCC 3 cut(s) 85, 507, 1356
BmsI GCATC 5 cut(s) 136, 459, 1044, 1261, 1740
BoxI GACNNNNGTC 1 cut(s) 1600
BpiI GAAGAC 3 cut(s) 1010, 1730, 1830
BplI GAGNNNNNCTC 4 cut(s) 479, 511, 1430, 1462
BpmI CTGGAG 1 cut(s) 263
BpuEI CTTGAG 4 cut(s) 113, 446, 1367, 1802
BsaJI CCNNGG 4 cut(s) 72, 323, 463, 613
BsaXI ACNNNNNCTCC 2 cut(s) 1022, 1052
Bsc4I CCNNNNNNNGG 3 cut(s) 78, 1013, 1697
Bse1I ACTGG 2 cut(s) 246, 390
Bse3DI GCAATG 1 cut(s) 1274
BseDI CCNNGG 4 cut(s) 72, 323, 463, 613
BseGI GGATG 5 cut(s) 151, 241, 474, 787, 859
BseLI CCNNNNNNNGG 3 cut(s) 78, 1013, 1697
BseMI GCAATG 1 cut(s) 1274
BseMII CTCAG 3 cut(s) 726, 1780, 1811
BseNI ACTGG 2 cut(s) 246, 390
BseRI GAGGAG 4 cut(s) 1083, 1088, 1146, 1799
BseXI GCAGC 2 cut(s) 745, 1090
BsgI GTGCAG 1 cut(s) 1236
Bsh1236I CGCG 1 cut(s) 744
BshNI GGYRCC 1 cut(s) 83
BsiHKAI GWGCWC 1 cut(s) 99
BsiHKCI CYCGRG 2 cut(s) 140, 1735
BslFI GGGAC 3 cut(s) 369, 1340, 1554
BslI CCNNNNNNNGG 3 cut(s) 78, 1013, 1697
BsmAI GTCTC 4 cut(s) 20, 73, 482, 715
BsmBI CGTCTC 1 cut(s) 715
BsmFI GGGAC 3 cut(s) 369, 1340, 1554
BsoBI CYCGRG 2 cut(s) 140, 1735
Bsp1286I GDGCHC 1 cut(s) 99
Bsp143I GATC 8 cut(s) 291, 448, 904, 968, 1416, 1451, 1507, 1762
BspACI CCGC 2 cut(s) 744, 1753
BspCNI CTCAG 3 cut(s) 725, 1779, 1812
BspFNI CGCG 1 cut(s) 744
BspHI TCATGA 1 cut(s) 1516
BspLI GGNNCC 3 cut(s) 85, 507, 1356
BspMI ACCTGC 1 cut(s) 1258
BspPI GGATC 1 cut(s) 976
BspT107I GGYRCC 1 cut(s) 83
BsrDI GCAATG 1 cut(s) 1274
BsrI ACTGG 2 cut(s) 246, 390
BssECI CCNNGG 4 cut(s) 72, 323, 463, 613
BssMI GATC 8 cut(s) 291, 448, 904, 968, 1416, 1451, 1507, 1762
BssNAI GTATAC 1 cut(s) 997
BssT1I CCWWGG 4 cut(s) 72, 323, 463, 613
Bst1107I GTATAC 1 cut(s) 997
Bst4CI ACNGT 4 cut(s) 31, 1156, 1296, 1558
BstAPI GCANNNNNTGC 1 cut(s) 83
BstC8I GCNNGC 1 cut(s) 1166
BstDEI CTNAG 7 cut(s) 435, 712, 1009, 1392, 1665, 1766, 1820
BstENI CCTNNNNNAGG 1 cut(s) 1695
BstF5I GGATG 5 cut(s) 151, 241, 474, 787, 859
BstFNI CGCG 1 cut(s) 744
BstH2I RGCGCY 1 cut(s) 1084
BstHHI GCGC 2 cut(s) 460, 1083
BstKTI GATC 8 cut(s) 294, 451, 907, 971, 1419, 1454, 1510, 1765
BstMAI GTCTC 4 cut(s) 20, 73, 482, 715
BstMBI GATC 8 cut(s) 291, 448, 904, 968, 1416, 1451, 1507, 1762
BstMWI GCNNNNNNNGC 2 cut(s) 83, 103
BstNSI RCATGY 5 cut(s) 1003, 1168, 1222, 1601, 1731
BstPAI GACNNNNGTC 1 cut(s) 1600
BstSFI CTRYAG 2 cut(s) 13, 1155
BstUI CGCG 1 cut(s) 744
BstV1I GCAGC 2 cut(s) 745, 1090
BstV2I GAAGAC 3 cut(s) 1010, 1730, 1830
BstX2I RGATCY 2 cut(s) 1451, 1762
BstYI RGATCY 2 cut(s) 1451, 1762
BstZ17I GTATAC 1 cut(s) 997
BsuI GTATCC 1 cut(s) 1370
BtsCI GGATG 5 cut(s) 151, 241, 474, 787, 859
BtsIMutI CAGTG 4 cut(s) 570, 760, 1539, 1774
BveI ACCTGC 1 cut(s) 1258
Cac8I GCNNGC 1 cut(s) 1166
CciI TCATGA 1 cut(s) 1516
CfoI GCGC 2 cut(s) 460, 1083
Cfr13I GGNCC 2 cut(s) 793, 1354
CseI GACGC 1 cut(s) 697
Csp6I GTAC 6 cut(s) 137, 305, 819, 1136, 1549, 1637
CspCI CAANNNNNGTGG 6 cut(s) 239, 274, 1269, 1304, 1515, 1550
CviQI GTAC 6 cut(s) 137, 305, 819, 1136, 1549, 1637
DdeI CTNAG 7 cut(s) 435, 712, 1009, 1392, 1665, 1766, 1820
DpnI GATC 8 cut(s) 293, 450, 906, 970, 1418, 1453, 1509, 1764
DpnII GATC 8 cut(s) 291, 448, 904, 968, 1416, 1451, 1507, 1762
DraI TTTAAA 2 cut(s) 1063, 1498
Ecl136II GAGCTC 1 cut(s) 97
Eco130I CCWWGG 4 cut(s) 72, 323, 463, 613
Eco24I GRGCYC 1 cut(s) 99
Eco32I GATATC 4 cut(s) 577, 727, 1477, 1826
Eco47I GGWCC 2 cut(s) 793, 1354
Eco47III AGCGCT 1 cut(s) 1082
Eco53kI GAGCTC 1 cut(s) 97
Eco57I CTGAAG 2 cut(s) 495, 1713
Eco88I CYCGRG 2 cut(s) 140, 1735
EcoICRI GAGCTC 1 cut(s) 97
EcoNI CCTNNNNNAGG 1 cut(s) 1695
EcoRV GATATC 4 cut(s) 577, 727, 1477, 1826
EcoT14I CCWWGG 4 cut(s) 72, 323, 463, 613
EcoT22I ATGCAT 2 cut(s) 1276, 1733
EcoT38I GRGCYC 1 cut(s) 99
ErhI CCWWGG 4 cut(s) 72, 323, 463, 613
Esp3I CGTCTC 1 cut(s) 715
FaqI GGGAC 3 cut(s) 369, 1340, 1554
FauI CCCGC 1 cut(s) 1746
FblI GTMKAC 3 cut(s) 12, 276, 996
Fnu4HI GCNGC 3 cut(s) 745, 759, 1079
FokI GGATG 5 cut(s) 158, 248, 481, 794, 866
FriOI GRGCYC 1 cut(s) 99
Fsp4HI GCNGC 3 cut(s) 745, 759, 1079
FspBI CTAG 4 cut(s) 582, 1449, 1575, 1760
GlaI GCGC 2 cut(s) 459, 1082
GluI GCNGC 3 cut(s) 745, 759, 1079
GsuI CTGGAG 1 cut(s) 263
HaeII RGCGCY 1 cut(s) 1084
HgaI GACGC 1 cut(s) 697
HhaI GCGC 2 cut(s) 460, 1083
Hin6I GCGC 2 cut(s) 458, 1081
HinP1I GCGC 2 cut(s) 458, 1081
HincII GTYRAC 1 cut(s) 277
HindII GTYRAC 1 cut(s) 277
HinfI GANTC 6 cut(s) 169, 328, 494, 988, 1342, 1708
HphI GGTGA 2 cut(s) 91, 1118
Hpy166II GTNNAC 5 cut(s) 13, 277, 997, 1313, 1712
Hpy188I TCNGA 6 cut(s) 514, 715, 801, 1208, 1704, 1821
Hpy8I GTNNAC 5 cut(s) 13, 277, 997, 1313, 1712
HpyAV CCTTC 4 cut(s) 519, 806, 1007, 1691
HpyCH4III ACNGT 4 cut(s) 31, 1156, 1296, 1558
HpyCH4IV ACGT 2 cut(s) 219, 1714
HpyCH4V TGCA 9 cut(s) 149, 472, 761, 814, 1003, 1035, 1253, 1274, 1731
HpyF10VI GCNNNNNNNGC 2 cut(s) 83, 103
HpyF3I CTNAG 7 cut(s) 435, 712, 1009, 1392, 1665, 1766, 1820
HpySE526I ACGT 2 cut(s) 219, 1714
HspAI GCGC 2 cut(s) 458, 1081
Kzo9I GATC 8 cut(s) 291, 448, 904, 968, 1416, 1451, 1507, 1762
LmnI GCTCC 7 cut(s) 505, 871, 929, 1075, 1161, 1224, 1786
LpnPI CCDG 5 cut(s) 227, 371, 847, 1263, 1704
Lsp1109I GCAGC 2 cut(s) 745, 1090
LweI GCATC 5 cut(s) 136, 459, 1044, 1261, 1740
MaeI CTAG 4 cut(s) 582, 1449, 1575, 1760
MaeII ACGT 2 cut(s) 219, 1714
MalI GATC 8 cut(s) 293, 450, 906, 970, 1418, 1453, 1509, 1764
MboI GATC 8 cut(s) 291, 448, 904, 968, 1416, 1451, 1507, 1762
MfeI CAATTG 1 cut(s) 280
MflI RGATCY 2 cut(s) 1451, 1762
MhlI GDGCHC 1 cut(s) 99
MlyI GAGTC 3 cut(s) 488, 1351, 1717
MmeI TCCRAC 1 cut(s) 831
Mph1103I ATGCAT 2 cut(s) 1276, 1733
MroXI GAANNNNTTC 2 cut(s) 1017, 1590
MseI TTAA 8 cut(s) 342, 563, 765, 920, 1062, 1497, 1560, 1743
MunI CAATTG 1 cut(s) 280
MvnI CGCG 1 cut(s) 744
MwoI GCNNNNNNNGC 2 cut(s) 83, 103
NdeII GATC 8 cut(s) 291, 448, 904, 968, 1416, 1451, 1507, 1762
NlaIV GGNNCC 3 cut(s) 85, 507, 1356
NsiI ATGCAT 2 cut(s) 1276, 1733
NspI RCATGY 5 cut(s) 1003, 1168, 1222, 1601, 1731
PaeI GCATGC 1 cut(s) 1168
PaeR7I CTCGAG 2 cut(s) 140, 1735
PagI TCATGA 1 cut(s) 1516
PciI ACATGT 2 cut(s) 1218, 1597
PdmI GAANNNNTTC 2 cut(s) 1017, 1590
PfeI GAWTC 3 cut(s) 169, 328, 988
PkrI GCNGC 3 cut(s) 746, 760, 1080
PleI GAGTC 3 cut(s) 488, 1350, 1716
PpsI GAGTC 3 cut(s) 488, 1350, 1716
PscI ACATGT 2 cut(s) 1218, 1597
PshAI GACNNNNGTC 1 cut(s) 1600
Psp124BI GAGCTC 1 cut(s) 99
PspN4I GGNNCC 3 cut(s) 85, 507, 1356
PspPI GGNCC 2 cut(s) 793, 1354
PspXI VCTCGAGB 1 cut(s) 140
PsuI RGATCY 2 cut(s) 1451, 1762
RsaI GTAC 6 cut(s) 138, 306, 820, 1137, 1550, 1638
RsaNI GTAC 6 cut(s) 137, 305, 819, 1136, 1549, 1637
SacI GAGCTC 1 cut(s) 99
SalI GTCGAC 1 cut(s) 275
SaqAI TTAA 8 cut(s) 342, 563, 765, 920, 1062, 1497, 1560, 1743
SatI GCNGC 3 cut(s) 745, 759, 1079
Sau3AI GATC 8 cut(s) 291, 448, 904, 968, 1416, 1451, 1507, 1762
Sau96I GGNCC 2 cut(s) 793, 1354
ScaI AGTACT 2 cut(s) 138, 1550
SchI GAGTC 3 cut(s) 488, 1351, 1717
SduI GDGCHC 1 cut(s) 99
SfaNI GCATC 5 cut(s) 136, 459, 1044, 1261, 1740
SfcI CTRYAG 2 cut(s) 13, 1155
Sfr274I CTCGAG 2 cut(s) 140, 1735
SinI GGWCC 2 cut(s) 793, 1354
SlaI CTCGAG 2 cut(s) 140, 1735
SmlI CTYRAG 6 cut(s) 92, 140, 425, 1382, 1735, 1781
SmoI CTYRAG 6 cut(s) 92, 140, 425, 1382, 1735, 1781
SphI GCATGC 1 cut(s) 1168
SsiI CCGC 2 cut(s) 744, 1753
SspI AATATT 1 cut(s) 1243
SspMI CTAG 4 cut(s) 582, 1449, 1575, 1760
SstI GAGCTC 1 cut(s) 99
StyI CCWWGG 4 cut(s) 72, 323, 463, 613
TaaI ACNGT 4 cut(s) 31, 1156, 1296, 1558
TaiI ACGT 2 cut(s) 222, 1717
TaqI TCGA 9 cut(s) 141, 276, 1129, 1199, 1467, 1594, 1610, 1736, 1830
TatI WGTACW 2 cut(s) 136, 1548
TauI GCSGC 1 cut(s) 747
TfiI GAWTC 3 cut(s) 169, 328, 988
Tru1I TTAA 8 cut(s) 342, 563, 765, 920, 1062, 1497, 1560, 1743
Tru9I TTAA 8 cut(s) 342, 563, 765, 920, 1062, 1497, 1560, 1743
TscAI CASTG 4 cut(s) 577, 760, 1539, 1774
TseI GCWGC 2 cut(s) 758, 1078
TspRI CASTG 4 cut(s) 577, 760, 1539, 1774
VpaK11BI GGWCC 2 cut(s) 793, 1354
XagI CCTNNNNNAGG 1 cut(s) 1695
XapI RAATTY 1 cut(s) 683
XbaI TCTAGA 1 cut(s) 1448
XceI RCATGY 5 cut(s) 1003, 1168, 1222, 1601, 1731
XcmI CCANNNNNNNNNTGG 1 cut(s) 183
XhoI CTCGAG 2 cut(s) 140, 1735
XmiI GTMKAC 3 cut(s) 12, 276, 996
XmnI GAANNNNTTC 2 cut(s) 1017, 1590
XspI CTAG 4 cut(s) 582, 1449, 1575, 1760
ZrmI AGTACT 2 cut(s) 138, 1550
Zsp2I ATGCAT 2 cut(s) 1276, 1733
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.