Rmu_sc0016190.1_g000002

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0016190.1
OG0000159
Physical Location & Seq
Forward (+)
3808 .. 9961
6154 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0016190.1_g000002.1.cds

Sequence Viewer

Length: 2112 bp
atggcacaaggctacctcaagacatctatgaaaaatgaagatgttgaacatatgggtgcagagtatataaggcagttttgttctagatctttgtttcaagtcgagatagatctcaaaacagtcatagtttttaaaatacatgatctagttcatgatctagtaatttcagtggcacaaatagagtactccacagtcaattttcgtccctctagtgcttttgaaatggttcaacatgtttcaatatctgaaaaggacttgtttggagaagaggcacaagttcccgaattcatgctaaagtcaaagaaattgcgaaccattctagttcctaaagatggtcaaatgagtcaacgttttgtgaagacatgcatctcgagattcaaatatatgcggttgctagatctcagttggtcgcctcaggaggagctaccaagttccgttggtagtttatttcatttgagatttctcaacttgtctgaaaattggaagataaaaaggcttcccaattccatcagtaagttgctgaatttggagaccttgtcccttgccggttgtgaagcactggaggaggtacccaaagacatagggaacctgttcaacctccgaagcttggagataactacacaacagacgtatttgccaaaaggaattagacgcctcaccttacttcaatctctaagttttgtcggatgtgtcaatcttaaatctttgggcgaagagatccaattcctcaacaaccttcacactttgtcgattagcaggtgtaataatttggaatcgctgccaccaaatatgaaacacatgaccgctctacatagtttgggtgtcggtggtggttgcgagaagcttcagatgatgagatcaggggaaggtcctcaaggtcttcgatcattgattatccagaattcaagtttggaggctttgcccccttggcttattgaagattctgcagatactctacagagcatatggcttggtgaatgtcataatctcacggcacttccggagttgataaagttcacattcctcgagcaactacgcattgaagaatgctccaaattgacggctttgccgcaagggttgcattgccttactgagttgagagaattgaagattattggttgtcctgaattgagcaaaagctgcaaaaggcaattaaaaggtgaggagtggtcaaacatggcacgtcaggcaaagattacactcgacaatcacttggccgacggtaggatcgtgtacctcacaattcctcgacgcagaggtgagtgctctgttcagtttctcatgaaatctttcctgcatttgaaaattggtcatcatattatctgtcttattaagctgcttgttcttatttttagtatccctgctgggtttggaatcaggaggagatggaggtgtcagagaggctggaggctgcaaaaggcgttggagagtgctgtggaggatatggacttgatggggaggcttttggatgagcttgataagcttcagaatcgggcgcaggaatgtgacttgggtatggtggatgcaaagattagtaagttgatgccggatcttgggtttgcacccaaggatggggacaggttgatggcttcgtttggtagtggttggcagatgaggatgtcacacggcaagattttgcttcagaacctggagaaacttcaggaagaggatcttgttgaaaggcggttcgagaggaaacagatcaggagcaggtttcctgaatggggaagaagtgggagatttgctgcagcacttaagaatctggaagctggcattggagataaggctgaggcacttgatttagataaaacagtgcttgagacagtagaagaagcagctgaggattggagacttgatgatacaaagggtctccttagtcgttgtactttcaaagcagttatgcttgatagaaaggtttccctcttaagtgttggtgggaagagattgaggagaaggctcctaaaatcaaagccaaatcaaatatgtcttgaggctgaaaaggaagctcggaagaagcaaaagatgcaggcattccagcaagcaaaggaacaaagaacgctaagagatggaattaaagtagtttatttcgaagaggcccactttaccagctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

703

Amino Acids

80.35

Weight (kDa)

8.96

Isoelectric Point (pI)

51.77

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 747
Acc36I ACCTGC 2 cut(s) 747, 1701
Acc65I GGTACC 1 cut(s) 568
AccB1I GGYRCC 1 cut(s) 568
AccBSI CCGCTC 1 cut(s) 806
AccIII TCCGGA 1 cut(s) 1000
AciI CCGC 4 cut(s) 388, 804, 1070, 1684
AclI AACGTT 1 cut(s) 349
AclWI GGATC 4 cut(s) 712, 1235, 1557, 1677
AcoI YGGCCR 1 cut(s) 1215
AcsI RAATTY 3 cut(s) 284, 523, 901
AcuI CTGAAG 4 cut(s) 830, 1469, 1625, 1643
AcyI GRCGYC 1 cut(s) 652
AfaI GTAC 4 cut(s) 185, 570, 1235, 1885
AfiI CCNNNNNNNGG 7 cut(s) 332, 607, 1224, 1553, 1571, 1572, 1724
AflII CTTAAG 2 cut(s) 1754, 1924
AflIII ACRYGT 1 cut(s) 232
AjiI CACGTC 1 cut(s) 1184
AjnI CCWGG 1 cut(s) 1647
AjuI GAANNNNNNNTTGG 4 cut(s) 893, 925, 1758, 1790
Alw21I GWGCWC 1 cut(s) 1268
Alw26I GTCTC 4 cut(s) 524, 1814, 1843, 1874
AlwI GGATC 4 cut(s) 712, 1235, 1557, 1677
AlwNI CAGNNNCTG 1 cut(s) 1648
Ama87I CYCGRG 2 cut(s) 370, 1025
Aor13HI TCCGGA 1 cut(s) 1000
AoxI GGCC 2 cut(s) 1215, 2094
ApeKI GCWGC 7 cut(s) 778, 1140, 1336, 1411, 1745, 1748, 1835
ApoI RAATTY 3 cut(s) 284, 523, 901
Asp700I GAANNNNTTC 4 cut(s) 225, 590, 1289, 1915
Asp718I GGTACC 1 cut(s) 568
AspLEI GCGC 1 cut(s) 1498
AspS9I GGNCC 2 cut(s) 869, 2095
AsuHPI GGTGA 4 cut(s) 649, 986, 1172, 1271
AsuII TTCGAA 1 cut(s) 2088
AvaI CYCGRG 2 cut(s) 370, 1025
AvaII GGWCC 1 cut(s) 869
AxyI CCTNAGG 1 cut(s) 414
BanI GGYRCC 1 cut(s) 568
BbsI GAAGAC 2 cut(s) 365, 872
Bbv12I GWGCWC 1 cut(s) 1268
BbvCI CCTCAGC 2 cut(s) 1788, 1839
BbvI GCAGC 7 cut(s) 765, 1127, 1323, 1398, 1732, 1760, 1847
BccI CCATC 7 cut(s) 326, 515, 1380, 1447, 1565, 1579, 2060
BceAI ACGGC 3 cut(s) 1008, 1077, 1642
BciT130I CCWGG 1 cut(s) 1649
BciVI GTATCC 1 cut(s) 1367
BcoDI GTCTC 4 cut(s) 524, 1814, 1843, 1874
BfaI CTAG 7 cut(s) 84, 146, 158, 210, 320, 395, 2110
BfmI CTRYAG 3 cut(s) 945, 956, 1746
BfrI CTTAAG 2 cut(s) 1754, 1924
BfuAI ACCTGC 2 cut(s) 747, 1701
BfuI GTATCC 1 cut(s) 1367
BglI GCCNNNNNGGC 1 cut(s) 928
BglII AGATCT 3 cut(s) 86, 109, 397
BisI GCNGC 8 cut(s) 779, 1070, 1141, 1337, 1412, 1746, 1749, 1836
BlsI GCNGC 8 cut(s) 780, 1071, 1142, 1338, 1413, 1747, 1750, 1837
BmcAI AGTACT 1 cut(s) 185
Bme1390I CCNGG 1 cut(s) 1649
Bme18I GGWCC 1 cut(s) 869
BmeT110I CYCGRG 2 cut(s) 370, 1025
BmgBI CACGTC 1 cut(s) 1184
BmgT120I GGNCC 2 cut(s) 869, 2095
BmiI GGNNCC 3 cut(s) 570, 587, 1958
BmrFI CCNGG 1 cut(s) 1649
BmsI GCATC 4 cut(s) 375, 1513, 1533, 2013
BpiI GAAGAC 2 cut(s) 365, 872
BpmI CTGGAG 3 cut(s) 581, 1426, 1670
Bpu10I CCTNAGC 2 cut(s) 1788, 1839
Bpu14I TTCGAA 1 cut(s) 2088
BpuEI CTTGAG 3 cut(s) 858, 1838, 2009
BsaHI GRCGYC 1 cut(s) 652
BsaI GGTCTC 2 cut(s) 524, 1874
BsaJI CCNNGG 2 cut(s) 926, 1566
BsaWI WCCGGW 1 cut(s) 1000
BsaXI ACNNNNNCTCC 2 cut(s) 521, 551
Bsc4I CCNNNNNNNGG 7 cut(s) 332, 607, 1224, 1553, 1571, 1572, 1724
Bse118I RCCGGY 1 cut(s) 545
Bse1I ACTGG 1 cut(s) 564
Bse21I CCTNAGG 1 cut(s) 414
Bse3DI GCAATG 1 cut(s) 1081
BseAI TCCGGA 1 cut(s) 1000
BseBI CCWGG 1 cut(s) 1649
BseDI CCNNGG 2 cut(s) 926, 1566
BseGI GGATG 5 cut(s) 692, 1474, 1528, 1576, 1623
BseLI CCNNNNNNNGG 7 cut(s) 332, 607, 1224, 1553, 1571, 1572, 1724
BseMI GCAATG 1 cut(s) 1081
BseMII CTCAG 5 cut(s) 415, 428, 1083, 1779, 1830
BseNI ACTGG 1 cut(s) 564
BseRI GAGGAG 5 cut(s) 434, 578, 1178, 1396, 1963
BseXI GCAGC 7 cut(s) 765, 1127, 1323, 1398, 1732, 1760, 1847
BseYI CCCAGC 1 cut(s) 1364
BsgI GTGCAG 1 cut(s) 78
BshFI GGCC 2 cut(s) 1217, 2096
BshNI GGYRCC 1 cut(s) 568
BsiHKAI GWGCWC 1 cut(s) 1268
BsiHKCI CYCGRG 2 cut(s) 370, 1025
BsiSI CCGG 3 cut(s) 546, 1001, 1547
BslFI GGGAC 3 cut(s) 189, 523, 1589
BslI CCNNNNNNNGG 7 cut(s) 332, 607, 1224, 1553, 1571, 1572, 1724
BsmAI GTCTC 4 cut(s) 524, 1814, 1843, 1874
BsmFI GGGAC 3 cut(s) 189, 523, 1589
BsmI GAATGC 2 cut(s) 1052, 2030
BsnI GGCC 2 cut(s) 1217, 2096
Bso31I GGTCTC 2 cut(s) 524, 1874
BsoBI CYCGRG 2 cut(s) 370, 1025
Bsp119I TTCGAA 1 cut(s) 2088
Bsp1286I GDGCHC 1 cut(s) 1268
Bsp13I TCCGGA 1 cut(s) 1000
BspACI CCGC 4 cut(s) 388, 804, 1070, 1684
BspANI GGCC 2 cut(s) 1217, 2096
BspCNI CTCAG 5 cut(s) 414, 427, 1084, 1780, 1831
BspEI TCCGGA 1 cut(s) 1000
BspHI TCATGA 2 cut(s) 151, 1281
BspLI GGNNCC 3 cut(s) 570, 587, 1958
BspMAI CTGCAG 2 cut(s) 949, 1750
BspMI ACCTGC 2 cut(s) 747, 1701
BspPI GGATC 4 cut(s) 712, 1235, 1557, 1677
BspT104I TTCGAA 1 cut(s) 2088
BspT107I GGYRCC 1 cut(s) 568
BspTI CTTAAG 2 cut(s) 1754, 1924
BspTNI GGTCTC 2 cut(s) 524, 1874
BsrBI CCGCTC 1 cut(s) 806
BsrDI GCAATG 1 cut(s) 1081
BsrFI RCCGGY 1 cut(s) 545
BsrI ACTGG 1 cut(s) 564
BssAI RCCGGY 1 cut(s) 545
BssECI CCNNGG 2 cut(s) 926, 1566
BssNI GRCGYC 1 cut(s) 652
BssT1I CCWWGG 2 cut(s) 926, 1566
Bst2UI CCWGG 1 cut(s) 1649
Bst4CI ACNGT 5 cut(s) 121, 193, 1223, 1813, 1825
Bst6I CTCTTC 5 cut(s) 261, 708, 1659, 1934, 2085
BstACI GRCGYC 1 cut(s) 652
BstAFI CTTAAG 2 cut(s) 1754, 1924
BstAPI GCANNNNNTGC 3 cut(s) 1078, 1140, 2023
BstBI TTCGAA 1 cut(s) 2088
BstC8I GCNNGC 3 cut(s) 1771, 2028, 2040
BstDEI CTNAG 8 cut(s) 401, 414, 674, 1092, 1788, 1839, 1874, 2060
BstF5I GGATG 5 cut(s) 692, 1474, 1528, 1576, 1623
BstHHI GCGC 1 cut(s) 1498
BstMAI GTCTC 4 cut(s) 524, 1814, 1843, 1874
BstMWI GCNNNNNNNGC 6 cut(s) 928, 1078, 1140, 1187, 1480, 2023
BstNI CCWGG 1 cut(s) 1649
BstNSI RCATGY 2 cut(s) 236, 366
BstSCI CCNGG 1 cut(s) 1647
BstSFI CTRYAG 3 cut(s) 945, 956, 1746
BstV1I GCAGC 7 cut(s) 765, 1127, 1323, 1398, 1732, 1760, 1847
BstV2I GAAGAC 2 cut(s) 365, 872
BstX2I RGATCY 6 cut(s) 86, 109, 397, 717, 1549, 1669
BstYI RGATCY 6 cut(s) 86, 109, 397, 717, 1549, 1669
Bsu36I CCTNAGG 1 cut(s) 414
BsuI GTATCC 1 cut(s) 1367
BsuRI GGCC 2 cut(s) 1217, 2096
BtrI CACGTC 1 cut(s) 1184
BtsCI GGATG 5 cut(s) 692, 1474, 1528, 1576, 1623
BtsIMutI CAGTG 3 cut(s) 174, 557, 1818
BveI ACCTGC 2 cut(s) 747, 1701
Cac8I GCNNGC 3 cut(s) 1771, 2028, 2040
CaiI CAGNNNCTG 1 cut(s) 1648
CciI TCATGA 2 cut(s) 151, 1281
CfoI GCGC 1 cut(s) 1498
Cfr10I RCCGGY 1 cut(s) 545
Cfr13I GGNCC 2 cut(s) 869, 2095
CseI GACGC 2 cut(s) 660, 1260
Csp6I GTAC 4 cut(s) 184, 569, 1234, 1884
CviAII CATG 8 cut(s) 140, 152, 233, 289, 363, 799, 1177, 1282
CviQI GTAC 4 cut(s) 184, 569, 1234, 1884
DdeI CTNAG 8 cut(s) 401, 414, 674, 1092, 1788, 1839, 1874, 2060
DraI TTTAAA 1 cut(s) 133
EaeI YGGCCR 1 cut(s) 1215
Eam1104I CTCTTC 5 cut(s) 261, 708, 1659, 1934, 2085
EarI CTCTTC 5 cut(s) 261, 708, 1659, 1934, 2085
Eco130I CCWWGG 2 cut(s) 926, 1566
Eco31I GGTCTC 2 cut(s) 524, 1874
Eco47I GGWCC 1 cut(s) 869
Eco57I CTGAAG 4 cut(s) 830, 1469, 1625, 1643
Eco81I CCTNAGG 1 cut(s) 414
Eco88I CYCGRG 2 cut(s) 370, 1025
EcoO109I RGGNCCY 1 cut(s) 869
EcoRI GAATTC 2 cut(s) 284, 901
EcoRII CCWGG 1 cut(s) 1647
EcoT14I CCWWGG 2 cut(s) 926, 1566
EcoT22I ATGCAT 1 cut(s) 368
ErhI CCWWGG 2 cut(s) 926, 1566
FaeI CATG 8 cut(s) 143, 155, 236, 292, 366, 802, 1180, 1285
FalI AAGNNNNNCTT 2 cut(s) 1656, 1688
FaqI GGGAC 3 cut(s) 189, 523, 1589
FatI CATG 8 cut(s) 139, 151, 232, 288, 362, 798, 1176, 1281
FauNDI CATATG 2 cut(s) 51, 965
Fnu4HI GCNGC 8 cut(s) 779, 1070, 1141, 1337, 1412, 1746, 1749, 1836
FokI GGATG 5 cut(s) 699, 1481, 1535, 1583, 1630
Fsp4HI GCNGC 8 cut(s) 779, 1070, 1141, 1337, 1412, 1746, 1749, 1836
FspBI CTAG 7 cut(s) 84, 146, 158, 210, 320, 395, 2110
GlaI GCGC 1 cut(s) 1497
GluI GCNGC 8 cut(s) 779, 1070, 1141, 1337, 1412, 1746, 1749, 1836
GsaI CCCAGC 1 cut(s) 1368
GsuI CTGGAG 3 cut(s) 581, 1426, 1670
HaeIII GGCC 2 cut(s) 1217, 2096
HapII CCGG 3 cut(s) 546, 1001, 1547
HgaI GACGC 2 cut(s) 660, 1260
HhaI GCGC 1 cut(s) 1498
Hin1I GRCGYC 1 cut(s) 652
Hin1II CATG 8 cut(s) 143, 155, 236, 292, 366, 802, 1180, 1285
Hin6I GCGC 1 cut(s) 1496
HinP1I GCGC 1 cut(s) 1496
HincII GTYRAC 1 cut(s) 347
HindII GTYRAC 1 cut(s) 347
HindIII AAGCTT 3 cut(s) 604, 842, 1481
HinfI GANTC 7 cut(s) 343, 375, 773, 941, 1374, 1489, 1759
HpaII CCGG 3 cut(s) 546, 1001, 1547
HphI GGTGA 4 cut(s) 649, 986, 1172, 1271
Hpy166II GTNNAC 3 cut(s) 347, 1017, 1234
Hpy188I TCNGA 9 cut(s) 247, 475, 602, 686, 849, 1398, 1488, 1644, 2010
Hpy8I GTNNAC 3 cut(s) 347, 1017, 1234
Hpy99I CGWCG 2 cut(s) 1223, 1254
HpyAV CCTTC 3 cut(s) 746, 860, 1947
HpyCH4III ACNGT 5 cut(s) 121, 193, 1223, 1813, 1825
HpyCH4IV ACGT 3 cut(s) 349, 629, 1183
HpyF10VI GCNNNNNNNGC 6 cut(s) 928, 1078, 1140, 1187, 1480, 2023
HpyF3I CTNAG 8 cut(s) 401, 414, 674, 1092, 1788, 1839, 1874, 2060
HpySE526I ACGT 3 cut(s) 349, 629, 1183
Hsp92I GRCGYC 1 cut(s) 652
Hsp92II CATG 8 cut(s) 143, 155, 236, 292, 366, 802, 1180, 1285
HspAI GCGC 1 cut(s) 1496
Kpn2I TCCGGA 1 cut(s) 1000
KpnI GGTACC 1 cut(s) 572
LmnI GCTCC 4 cut(s) 421, 1055, 1707, 1962
Lsp1109I GCAGC 7 cut(s) 765, 1127, 1323, 1398, 1732, 1760, 1847
LweI GCATC 4 cut(s) 375, 1513, 1533, 2013
MaeI CTAG 7 cut(s) 84, 146, 158, 210, 320, 395, 2110
MaeII ACGT 3 cut(s) 349, 629, 1183
MaeIII GTNAC 2 cut(s) 1505, 1620
MbiI CCGCTC 1 cut(s) 806
MflI RGATCY 6 cut(s) 86, 109, 397, 717, 1549, 1669
MhlI GDGCHC 1 cut(s) 1268
MlyI GAGTC 1 cut(s) 352
MmeI TCCRAC 2 cut(s) 664, 1404
Mph1103I ATGCAT 1 cut(s) 368
MroI TCCGGA 1 cut(s) 1000
MroXI GAANNNNTTC 4 cut(s) 225, 590, 1289, 1915
MseI TTAA 7 cut(s) 132, 699, 1154, 1332, 1755, 1925, 2073
MslI CAYNNNNRTG 1 cut(s) 54
MspA1I CMGCKG 1 cut(s) 1838
MspCI CTTAAG 2 cut(s) 1754, 1924
MspI CCGG 3 cut(s) 546, 1001, 1547
MspR9I CCNGG 1 cut(s) 1649
Mva1269I GAATGC 2 cut(s) 1052, 2030
MvaI CCWGG 1 cut(s) 1649
MwoI GCNNNNNNNGC 6 cut(s) 928, 1078, 1140, 1187, 1480, 2023
NdeI CATATG 2 cut(s) 51, 965
NlaIII CATG 8 cut(s) 143, 155, 236, 292, 366, 802, 1180, 1285
NlaIV GGNNCC 3 cut(s) 570, 587, 1958
NmuCI GTSAC 2 cut(s) 1505, 1620
NsiI ATGCAT 1 cut(s) 368
NspI RCATGY 2 cut(s) 236, 366
NspV TTCGAA 1 cut(s) 2088
PaeR7I CTCGAG 2 cut(s) 370, 1025
PagI TCATGA 2 cut(s) 151, 1281
PaqCI CACCTGC 1 cut(s) 747
PciI ACATGT 1 cut(s) 232
PcsI WCGNNNNNNNCGW 1 cut(s) 1227
PctI GAATGC 2 cut(s) 1052, 2030
PdmI GAANNNNTTC 4 cut(s) 225, 590, 1289, 1915
PfeI GAWTC 6 cut(s) 375, 773, 941, 1374, 1489, 1759
PflFI GACNNNGTC 1 cut(s) 535
PkrI GCNGC 8 cut(s) 780, 1071, 1142, 1338, 1413, 1747, 1750, 1837
PleI GAGTC 1 cut(s) 351
PpsI GAGTC 1 cut(s) 351
PpuMI RGGWCCY 1 cut(s) 869
PscI ACATGT 1 cut(s) 232
Psp1406I AACGTT 1 cut(s) 349
Psp5II RGGWCCY 1 cut(s) 869
Psp6I CCWGG 1 cut(s) 1647
PspFI CCCAGC 1 cut(s) 1364
PspGI CCWGG 1 cut(s) 1647
PspN4I GGNNCC 3 cut(s) 570, 587, 1958
PspPI GGNCC 2 cut(s) 869, 2095
PspPPI RGGWCCY 1 cut(s) 869
PspXI VCTCGAGB 1 cut(s) 1025
PstI CTGCAG 2 cut(s) 949, 1750
PstNI CAGNNNCTG 1 cut(s) 1648
PsuI RGATCY 6 cut(s) 86, 109, 397, 717, 1549, 1669
PsyI GACNNNGTC 1 cut(s) 535
PvuII CAGCTG 1 cut(s) 1838
RsaI GTAC 4 cut(s) 185, 570, 1235, 1885
RsaNI GTAC 4 cut(s) 184, 569, 1234, 1884
RseI CAYNNNNRTG 1 cut(s) 54
SaqAI TTAA 7 cut(s) 132, 699, 1154, 1332, 1755, 1925, 2073
SatI GCNGC 8 cut(s) 779, 1070, 1141, 1337, 1412, 1746, 1749, 1836
Sau96I GGNCC 2 cut(s) 869, 2095
ScaI AGTACT 1 cut(s) 185
SchI GAGTC 1 cut(s) 352
ScrFI CCNGG 1 cut(s) 1649
SduI GDGCHC 1 cut(s) 1268
SfaNI GCATC 4 cut(s) 375, 1513, 1533, 2013
SfcI CTRYAG 3 cut(s) 945, 956, 1746
Sfr274I CTCGAG 2 cut(s) 370, 1025
SfuI TTCGAA 1 cut(s) 2088
SinI GGWCC 1 cut(s) 869
SlaI CTCGAG 2 cut(s) 370, 1025
SmiMI CAYNNNNRTG 1 cut(s) 54
SmlI CTYRAG 8 cut(s) 17, 370, 873, 1025, 1754, 1817, 1924, 1988
SmoI CTYRAG 8 cut(s) 17, 370, 873, 1025, 1754, 1817, 1924, 1988
SsiI CCGC 4 cut(s) 388, 804, 1070, 1684
SspMI CTAG 7 cut(s) 84, 146, 158, 210, 320, 395, 2110
StyD4I CCNGG 1 cut(s) 1647
StyI CCWWGG 2 cut(s) 926, 1566
TaaI ACNGT 5 cut(s) 121, 193, 1223, 1813, 1825
TaiI ACGT 3 cut(s) 352, 632, 1186
TaqI TCGA 9 cut(s) 102, 371, 749, 883, 1026, 1203, 1249, 1689, 2088
TatI WGTACW 2 cut(s) 183, 1883
TauI GCSGC 1 cut(s) 1072
TfiI GAWTC 6 cut(s) 375, 773, 941, 1374, 1489, 1759
Tru1I TTAA 7 cut(s) 132, 699, 1154, 1332, 1755, 1925, 2073
Tru9I TTAA 7 cut(s) 132, 699, 1154, 1332, 1755, 1925, 2073
TscAI CASTG 3 cut(s) 174, 564, 1818
TseFI GTSAC 2 cut(s) 1505, 1620
TseI GCWGC 7 cut(s) 778, 1140, 1336, 1411, 1745, 1748, 1835
Tsp45I GTSAC 2 cut(s) 1505, 1620
TspDTI ATGAA 7 cut(s) 44, 51, 140, 277, 440, 806, 1298
TspGWI ACGGA 1 cut(s) 424
TspRI CASTG 3 cut(s) 174, 564, 1818
Tth111I GACNNNGTC 1 cut(s) 535
Vha464I CTTAAG 2 cut(s) 1754, 1924
VpaK11BI GGWCC 1 cut(s) 869
XapI RAATTY 3 cut(s) 284, 523, 901
XbaI TCTAGA 1 cut(s) 83
XceI RCATGY 2 cut(s) 236, 366
XhoI CTCGAG 2 cut(s) 370, 1025
XmnI GAANNNNTTC 4 cut(s) 225, 590, 1289, 1915
XspI CTAG 7 cut(s) 84, 146, 158, 210, 320, 395, 2110
ZrmI AGTACT 1 cut(s) 185
Zsp2I ATGCAT 1 cut(s) 368
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.