Rmu_ssc0000238.1_g000010

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000238.1
OG0000159
Physical Location & Seq
Forward (+)
46030 .. 50158
4129 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000238.1_g000010.1.cds

Sequence Viewer

Length: 2055 bp
atgcaccccttagaaggtcttccccacaaagactgcatctccttgttcatcaaaagggcatttaaaagaggagaggagcaacgctatcaacatttgatagaaattggtgaggatattgtgaagaagtgtggaggagttcctttagcagtagctactgtagggagcatgctctatttgaatagagagcgacaccattggttgcgtgtcagagatgatgatatgtggagtataggaaatgacaatattttatctgcactcaaattgagttacgatgcattgccacgacacttgaaaccatgttttgcattttgttcacttttcccaaaggattatgaattcaatagtgaaatgttgattccattgtggatggcacaaggctacctcaagacatctaagaaaaatgaagatttggatcagatgggtatagattatataaggcagtgttgctctaggtctttgtttcaagttgatatggatctcaaaacatttataagttttaaaatacatgatctactacatgatttagcgattttggtggcacaagtagagtactccacagtcaatttccgtccttctagtgcttttgaaatggttcgacatatgtcaatatccaaaaaggacttgcttggagaagaggcacaagttcctgatttcatgctcaagtcaaagaaattgcgaaccattcgaattactagagatggcgagatgaatcaacgttttgtgaagacatgcatctcgaggttcaaatatatgcgggtgctagatatcggtgggtcgcctctcgaggagctaccaagttccattggtagtttgtttcatttgagattcctcgacttgtctggtaataggaagataaaaaggcttcccaattccatcagtaagctactgaatatggagaccttgtcccttgaggattgcgaagcacttgaggaaatacccaaggacatagggaacctgattaacctacgaagcttgacgataacaacccaacagacgtatttgccaaaaggaattaggcgcctcacctcacttcaatctttaagttttgttggatgtgtcaatcttaaatctttgggcgaagagatccaattcctcaacaaccttcgtaaactggcgatttgcagttgtgataagttggaatccttgccaccaaatatgaaacacatgactgctttagatactttgggtgtcggtgattgcgagaagcttcagttgatgagatcaggggaaggtcctcgaggtcttcgatcattgattatcgagaattcaagtttggagggtttgcccccttggctcattgaagattctgcagacactctacagagcatatatcttggtggatgtcataatctcacggcactaccggagttgataaagttcacattcctcgaggaactacacattgaagtatgctccaaattgtcggctttgctgccgcaaggtttgcaaatgagcaaaagctgcaaaaggcaattaaaaggtgaggagtggtcaaagatggcacgtcaggtgaagattacactcgacgactctgatgatgaagctgacaatcgctgggccgacggtaggatcgcgtacctcactttgagacgacgcctttctcatgaaatctttcctgcatttgaaaattgggtcagaggaagaagaaggtcgctagctaaaagttgtactctgtggagagcttcaggtggctcaaggagacctgtgatagagtggtctatgcccgcttgcattgggaaagagatccatctactgattccagacggagatgctggatttatttctttggagaacctcttgtttttagcaaatttattttcgacatctttccaatgcctattgaacaagcaaggaggaaaactagctgcttgggaatatccatttgttccaatcagggtgcttcaaaatgaagaagtcctgcactgctgtattgttcgagcttggagtagcttggattggtcaaagatggcatgtcaggcgaagattacactcgactcttatgtggatactgatgatgaagaagacgatgatgaaggtacaccaatgatcgactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04014 map04014
Pfam Domains
Protein Families
LRR_8 NB-ARC

Protein Analysis

684

Amino Acids

78.01

Weight (kDa)

6.5

Isoelectric Point (pI)

54.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000159)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g22800 FvH4_1g23030 FvH4_2g17621 FvH4_2g17623 FvH4_2g17640 FvH4_3g16170 FvH4_4g15173 FvH4_4g15190 FvH4_5g16900 FvH4_6g51550 FvH4_6g51570 FvH4_6g51610 FvH4_6g51610 FvH4_7g31270 FvH4_7g31321 FvH4_7g31321
malus_domestica MD06G1096400.v1.1 MD14G1231900.v1.1
prunus_persica Prupe.5G111200_v2.0.a1 Prupe.5G227800_v2.0.a1
pyrus_communis pycom06g09270
rosa_chinensis RchiOBHm_Chr2g0116281 RchiOBHm_Chr2g0116321 RchiOBHm_Chr2g0116651 RchiOBHm_Chr2g0116681 RchiOBHm_Chr2g0116691 RchiOBHm_Chr2g0116761 RchiOBHm_Chr2g0116981 RchiOBHm_Chr2g0117271 RchiOBHm_Chr2g0117561 RchiOBHm_Chr2g0117671 RchiOBHm_Chr5g0009011 RchiOBHm_Chr5g0009021 RchiOBHm_Chr5g0009031 RchiOBHm_Chr5g0051501 RchiOBHm_Chr5g0059261 RchiOBHm_Chr7g0179121 RchiOBHm_Chr7g0179151 RchiOBHm_Chr7g0180011 RchiOBHm_Chr7g0180031
rosa_laevigata RLG00000018253 RLG00000018256 RLG00000018298 RLG00000018318 RLG00000018339 RLG00000018341 RLG00000018355 RLG00000018360 RLG00000018363 RLG00000018364 RLG00000021097
rosa_multiflora Rmu_co8108666.1_g000001 Rmu_co8113786.1_g000001 Rmu_co8303371.1_g000001 Rmu_co8353409.1_g000001 Rmu_sc0000888.1_g000020 Rmu_sc0001035.1_g000046 Rmu_sc0001617.1_g000028 Rmu_sc0001617.1_g000031 Rmu_sc0002009.1_g000005 Rmu_sc0002009.1_g000024 Rmu_sc0002034.1_g000013 Rmu_sc0002191.1_g000001 Rmu_sc0002983.1_g000027 Rmu_sc0003499.1_g000025 Rmu_sc0004602.1_g000012 Rmu_sc0004795.1_g000010 Rmu_sc0004795.1_g000017 Rmu_sc0004888.1_g000050 Rmu_sc0004888.1_g000052 Rmu_sc0004888.1_g000054 Rmu_sc0004942.1_g000014 Rmu_sc0004942.1_g000015 Rmu_sc0004942.1_g000017 Rmu_sc0004942.1_g000020 Rmu_sc0005792.1_g000003 Rmu_sc0006184.1_g000014 Rmu_sc0006730.1_g000011 Rmu_sc0006730.1_g000012 Rmu_sc0011574.1_g000001 Rmu_sc0011574.1_g000002 Rmu_sc0011969.1_g000003 Rmu_sc0016190.1_g000001 Rmu_sc0016190.1_g000002 Rmu_sc0020362.1_g000003 Rmu_sc0020362.1_g000004 Rmu_sc0020362.1_g000005 Rmu_sc0025557.1_g000002 Rmu_sc0031855.1_g000001 Rmu_ssc0000119.1_g000002 Rmu_ssc0000119.1_g000006 Rmu_ssc0000119.1_g000008 Rmu_ssc0000119.1_g000015 Rmu_ssc0000119.1_g000018 Rmu_ssc0000119.1_g000023 Rmu_ssc0000238.1_g000010 Rmu_ssc0000238.1_g000014
rosa_roxburghii Rroxscaffold_1G00067000 Rroxscaffold_1G00067640 Rroxscaffold_2G00126270 Rroxscaffold_2G00126830 Rroxscaffold_2G00126970 Rroxscaffold_2G00127350 Rroxscaffold_3G00273210 Rroxscaffold_3G00273240 Rroxscaffold_3G00274260 Rroxscaffold_3G00274370 Rroxscaffold_4G00321190
rosa_rugosa Rorug02G0205600 Rorug02G0209300 Rorug02G0209500 Rorug02G0211700 Rorug02G0212300 Rorug02G0213200 Rorug02G0213200 Rorug02G0213400 Rorug03G0352400 Rorug03G0352500 Rorug04G0440900 Rorug05G0171300 Rorug05G0322100 Rorug06G0421200 Rorug06G0421400 Rorug06G0421500 Rorug06G0421600 Rorug06G0429800 Rorug06G0430000 Rorug06G0430100
rosa_samantha Rh1DG100600 Rh2AG260900 Rh2AG261000 Rh2AG263400 Rh2AG263600 Rh2AG263900 Rh2AG265300 Rh2AG269300 Rh2AG269700 Rh2BG281000 Rh2CG267300 Rh2CG267500 Rh2CG270600 Rh2CG270700 Rh2CG271100 Rh2DG274100 Rh2DG290500 Rh2DG291600 Rh4DG089700 Rh5CG077900 Rh5CG421700 Rh5DG065900 Rh5DG066000 Rh7BG020200 Rh7BG020700 Rh7BG029700 Rh7BG029800 Rh7BG029900 Rh7BG030100 Rh7CG031400 Rh7CG031900 Rh7DG021300 Rh7DG030600 Rh7DG030900
rosa_wichuraiana Rw0G008860 Rw1G007590 Rw2G020460 Rw2G020740 Rw2G020770 Rw2G020820 Rw2G020920 Rw2G021100 Rw2G021120 Rw2G021260 Rw2G021280 Rw2G021290 Rw5G006520 Rw5G028690 Rw5G036360 Rw5G036370 Rw7G001730 Rw7G002430 Rw7G002450 Rw7G002470 Rw7G002510

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 491
AbsI CCTCGAGG 2 cut(s) 1236, 1388
AccB1I GGYRCC 1 cut(s) 1017
AccII CGCG 1 cut(s) 1574
AciI CCGC 3 cut(s) 754, 1436, 1725
AclI AACGTT 1 cut(s) 715
AclWI GGATC 5 cut(s) 420, 483, 1078, 1577, 1738
AcsI RAATTY 3 cut(s) 335, 1264, 1810
AcuI CTGAAG 2 cut(s) 1193, 1668
AcyI GRCGYC 2 cut(s) 1018, 1594
AfaI GTAC 4 cut(s) 551, 1577, 1669, 2038
AfiI CCNNNNNNNGG 2 cut(s) 14, 1566
AjiI CACGTC 1 cut(s) 1505
AjuI GAANNNNNNNTTGG 2 cut(s) 1256, 1288
Alw26I GTCTC 3 cut(s) 890, 1582, 1693
AlwI GGATC 5 cut(s) 420, 483, 1078, 1577, 1738
Ama87I CYCGRG 4 cut(s) 736, 782, 1236, 1388
AoxI GGCC 1 cut(s) 1557
ApeKI GCWGC 3 cut(s) 1432, 1461, 1865
ApoI RAATTY 3 cut(s) 335, 1264, 1810
Asp700I GAANNNNTTC 3 cut(s) 18, 591, 1611
AspLEI GCGC 1 cut(s) 1020
AspS9I GGNCC 2 cut(s) 1232, 1557
AsuHPI GGTGA 5 cut(s) 119, 1015, 1205, 1493, 1522
AsuII TTCGAA 1 cut(s) 685
AsuNHI GCTAGC 1 cut(s) 1654
AvaI CYCGRG 4 cut(s) 736, 782, 1236, 1388
AvaII GGWCC 1 cut(s) 1232
BanI GGYRCC 1 cut(s) 1017
BbsI GAAGAC 4 cut(s) 11, 731, 1235, 2028
BbvI GCAGC 3 cut(s) 1419, 1448, 1852
BccI CCATC 7 cut(s) 361, 412, 692, 881, 1492, 1755, 1960
BceAI ACGGC 1 cut(s) 1371
BciVI GTATCC 1 cut(s) 1999
BcoDI GTCTC 3 cut(s) 890, 1582, 1693
BfaI CTAG 6 cut(s) 450, 576, 693, 761, 1655, 1862
BfmI CTRYAG 3 cut(s) 156, 1308, 1319
BfoI RGCGCY 1 cut(s) 1021
BfuI GTATCC 1 cut(s) 1999
BglI GCCNNNNNGGC 1 cut(s) 1291
BisI GCNGC 4 cut(s) 1433, 1436, 1462, 1866
BlsI GCNGC 4 cut(s) 1434, 1437, 1463, 1867
BmcAI AGTACT 1 cut(s) 551
Bme18I GGWCC 1 cut(s) 1232
BmeT110I CYCGRG 4 cut(s) 736, 782, 1236, 1388
BmgBI CACGTC 1 cut(s) 1505
BmgT120I GGNCC 2 cut(s) 1232, 1557
BmiI GGNNCC 2 cut(s) 953, 1019
BmsI GCATC 4 cut(s) 45, 262, 741, 1759
BmtI GCTAGC 1 cut(s) 1658
BoxI GACNNNNGTC 1 cut(s) 601
BpiI GAAGAC 4 cut(s) 11, 731, 1235, 2028
Bpu14I TTCGAA 1 cut(s) 685
BpuEI CTTGAG 5 cut(s) 368, 644, 929, 947, 1678
BsaBI GATNNNNATC 2 cut(s) 411, 474
BsaHI GRCGYC 2 cut(s) 1018, 1594
BsaI GGTCTC 2 cut(s) 890, 1693
BsaJI CCNNGG 2 cut(s) 939, 1289
BsaWI WCCGGW 1 cut(s) 1363
BsaXI ACNNNNNCTCC 4 cut(s) 23, 53, 887, 917
Bsc4I CCNNNNNNNGG 2 cut(s) 14, 1566
Bse1I ACTGG 1 cut(s) 1116
Bse3DI GCAATG 1 cut(s) 275
Bse8I GATNNNNATC 2 cut(s) 411, 474
BseDI CCNNGG 2 cut(s) 939, 1289
BseGI GGATG 3 cut(s) 372, 1058, 1346
BseJI GATNNNNATC 2 cut(s) 411, 474
BseLI CCNNNNNNNGG 2 cut(s) 14, 1566
BseMI GCAATG 1 cut(s) 275
BseNI ACTGG 1 cut(s) 1116
BseRI GAGGAG 5 cut(s) 84, 89, 147, 800, 1499
BseXI GCAGC 3 cut(s) 1419, 1448, 1852
BseYI CCCAGC 1 cut(s) 1554
BsgI GTGCAG 2 cut(s) 237, 1904
Bsh1236I CGCG 1 cut(s) 1574
BshFI GGCC 1 cut(s) 1559
BshNI GGYRCC 1 cut(s) 1017
BsiHKCI CYCGRG 4 cut(s) 736, 782, 1236, 1388
BsiSI CCGG 1 cut(s) 1364
BslFI GGGAC 1 cut(s) 889
BslI CCNNNNNNNGG 2 cut(s) 14, 1566
BsmAI GTCTC 3 cut(s) 890, 1582, 1693
BsmBI CGTCTC 1 cut(s) 1582
BsmFI GGGAC 1 cut(s) 889
BsnI GGCC 1 cut(s) 1559
Bso31I GGTCTC 2 cut(s) 890, 1693
BsoBI CYCGRG 4 cut(s) 736, 782, 1236, 1388
Bsp119I TTCGAA 1 cut(s) 685
Bsp143I GATC 9 cut(s) 412, 475, 508, 1083, 1220, 1247, 1569, 1743, 2046
BspACI CCGC 3 cut(s) 754, 1436, 1725
BspANI GGCC 1 cut(s) 1559
BspFNI CGCG 1 cut(s) 1574
BspHI TCATGA 1 cut(s) 1603
BspLI GGNNCC 2 cut(s) 953, 1019
BspMAI CTGCAG 1 cut(s) 1312
BspOI GCTAGC 1 cut(s) 1658
BspPI GGATC 5 cut(s) 420, 483, 1078, 1577, 1738
BspT104I TTCGAA 1 cut(s) 685
BspT107I GGYRCC 1 cut(s) 1017
BspTNI GGTCTC 2 cut(s) 890, 1693
BsrDI GCAATG 1 cut(s) 275
BsrI ACTGG 1 cut(s) 1116
BssECI CCNNGG 2 cut(s) 939, 1289
BssMI GATC 9 cut(s) 412, 475, 508, 1083, 1220, 1247, 1569, 1743, 2046
BssNI GRCGYC 2 cut(s) 1018, 1594
BssT1I CCWWGG 2 cut(s) 939, 1289
Bst4CI ACNGT 3 cut(s) 157, 559, 1565
Bst6I CTCTTC 2 cut(s) 627, 1074
BstACI GRCGYC 2 cut(s) 1018, 1594
BstAPI GCANNNNNTGC 2 cut(s) 1444, 1461
BstBI TTCGAA 1 cut(s) 685
BstC8I GCNNGC 4 cut(s) 167, 1656, 1725, 1729
BstDEI CTNAG 2 cut(s) 10, 393
BstF5I GGATG 3 cut(s) 372, 1058, 1346
BstFNI CGCG 1 cut(s) 1574
BstH2I RGCGCY 1 cut(s) 1021
BstHHI GCGC 1 cut(s) 1020
BstKTI GATC 9 cut(s) 415, 478, 511, 1086, 1223, 1250, 1572, 1746, 2049
BstMAI GTCTC 3 cut(s) 890, 1582, 1693
BstMBI GATC 9 cut(s) 412, 475, 508, 1083, 1220, 1247, 1569, 1743, 2046
BstMWI GCNNNNNNNGC 4 cut(s) 1291, 1444, 1461, 1976
BstNSI RCATGY 3 cut(s) 169, 732, 1974
BstPAI GACNNNNGTC 1 cut(s) 601
BstSFI CTRYAG 3 cut(s) 156, 1308, 1319
BstUI CGCG 1 cut(s) 1574
BstV1I GCAGC 3 cut(s) 1419, 1448, 1852
BstV2I GAAGAC 4 cut(s) 11, 731, 1235, 2028
BstX2I RGATCY 3 cut(s) 475, 1083, 1743
BstYI RGATCY 3 cut(s) 475, 1083, 1743
BsuI GTATCC 1 cut(s) 1999
BsuRI GGCC 1 cut(s) 1559
BtrI CACGTC 1 cut(s) 1505
BtsCI GGATG 3 cut(s) 372, 1058, 1346
BtsI GCAGTG 2 cut(s) 446, 1921
BtsIMutI CAGTG 2 cut(s) 446, 1921
Cac8I GCNNGC 4 cut(s) 167, 1656, 1725, 1729
CciI TCATGA 1 cut(s) 1603
CfoI GCGC 1 cut(s) 1020
Cfr13I GGNCC 2 cut(s) 1232, 1557
CseI GACGC 1 cut(s) 1602
Csp6I GTAC 4 cut(s) 550, 1576, 1668, 2037
CspCI CAANNNNNGTGG 2 cut(s) 270, 305
CviAII CATG 9 cut(s) 166, 297, 506, 518, 655, 729, 1165, 1604, 1971
CviQI GTAC 4 cut(s) 550, 1576, 1668, 2037
DdeI CTNAG 2 cut(s) 10, 393
DinI GGCGCC 1 cut(s) 1019
DpnI GATC 9 cut(s) 414, 477, 510, 1085, 1222, 1249, 1571, 1745, 2048
DpnII GATC 9 cut(s) 412, 475, 508, 1083, 1220, 1247, 1569, 1743, 2046
DraI TTTAAA 2 cut(s) 64, 499
Eam1104I CTCTTC 2 cut(s) 627, 1074
EarI CTCTTC 2 cut(s) 627, 1074
Eco130I CCWWGG 2 cut(s) 939, 1289
Eco31I GGTCTC 2 cut(s) 890, 1693
Eco32I GATATC 1 cut(s) 766
Eco47I GGWCC 1 cut(s) 1232
Eco57I CTGAAG 2 cut(s) 1193, 1668
Eco88I CYCGRG 4 cut(s) 736, 782, 1236, 1388
EcoO109I RGGNCCY 1 cut(s) 1232
EcoRI GAATTC 2 cut(s) 335, 1264
EcoRV GATATC 1 cut(s) 766
EcoT14I CCWWGG 2 cut(s) 939, 1289
EcoT22I ATGCAT 2 cut(s) 277, 734
EgeI GGCGCC 1 cut(s) 1019
EheI GGCGCC 1 cut(s) 1019
ErhI CCWWGG 2 cut(s) 939, 1289
Esp3I CGTCTC 1 cut(s) 1582
FaeI CATG 9 cut(s) 169, 300, 509, 521, 658, 732, 1168, 1607, 1974
FaqI GGGAC 1 cut(s) 889
FatI CATG 9 cut(s) 165, 296, 505, 517, 654, 728, 1164, 1603, 1970
FauI CCCGC 2 cut(s) 747, 1732
FauNDI CATATG 1 cut(s) 600
Fnu4HI GCNGC 4 cut(s) 1433, 1436, 1462, 1866
FokI GGATG 3 cut(s) 379, 1065, 1353
Fsp4HI GCNGC 4 cut(s) 1433, 1436, 1462, 1866
FspBI CTAG 6 cut(s) 450, 576, 693, 761, 1655, 1862
GlaI GCGC 1 cut(s) 1019
GluI GCNGC 4 cut(s) 1433, 1436, 1462, 1866
GsaI CCCAGC 1 cut(s) 1558
HaeII RGCGCY 1 cut(s) 1021
HaeIII GGCC 1 cut(s) 1559
HapII CCGG 1 cut(s) 1364
HgaI GACGC 1 cut(s) 1602
HhaI GCGC 1 cut(s) 1020
Hin1I GRCGYC 2 cut(s) 1018, 1594
Hin1II CATG 9 cut(s) 169, 300, 509, 521, 658, 732, 1168, 1607, 1974
Hin6I GCGC 1 cut(s) 1018
HinP1I GCGC 1 cut(s) 1018
HindIII AAGCTT 2 cut(s) 970, 1205
HinfI GANTC 8 cut(s) 355, 709, 825, 1139, 1304, 1529, 1756, 1994
HpaII CCGG 1 cut(s) 1364
HphI GGTGA 5 cut(s) 119, 1015, 1205, 1493, 1522
Hpy166II GTNNAC 4 cut(s) 314, 1109, 1380, 2039
Hpy188I TCNGA 4 cut(s) 209, 417, 1534, 1637
Hpy188III TCNNGA 7 cut(s) 385, 647, 736, 782, 1261, 1604, 1760
Hpy8I GTNNAC 4 cut(s) 314, 1109, 1380, 2039
Hpy99I CGWCG 3 cut(s) 1529, 1565, 1596
HpyAV CCTTC 6 cut(s) 8, 582, 1112, 1223, 1641, 2027
HpyCH4III ACNGT 3 cut(s) 157, 559, 1565
HpyCH4IV ACGT 3 cut(s) 715, 995, 1504
HpyF10VI GCNNNNNNNGC 4 cut(s) 1291, 1444, 1461, 1976
HpyF3I CTNAG 2 cut(s) 10, 393
HpySE526I ACGT 3 cut(s) 715, 995, 1504
Hsp92I GRCGYC 2 cut(s) 1018, 1594
Hsp92II CATG 9 cut(s) 169, 300, 509, 521, 658, 732, 1168, 1607, 1974
HspAI GCGC 1 cut(s) 1018
KasI GGCGCC 1 cut(s) 1017
Kzo9I GATC 9 cut(s) 412, 475, 508, 1083, 1220, 1247, 1569, 1743, 2046
LmnI GCTCC 4 cut(s) 76, 162, 787, 1418
Lsp1109I GCAGC 3 cut(s) 1419, 1448, 1852
LweI GCATC 4 cut(s) 45, 262, 741, 1759
MaeI CTAG 6 cut(s) 450, 576, 693, 761, 1655, 1862
MaeII ACGT 3 cut(s) 715, 995, 1504
MaeIII GTNAC 1 cut(s) 266
MalI GATC 9 cut(s) 414, 477, 510, 1085, 1222, 1249, 1571, 1745, 2048
MboI GATC 9 cut(s) 412, 475, 508, 1083, 1220, 1247, 1569, 1743, 2046
MflI RGATCY 3 cut(s) 475, 1083, 1743
Mly113I GGCGCC 1 cut(s) 1018
MlyI GAGTC 2 cut(s) 1523, 1988
MmeI TCCRAC 2 cut(s) 1030, 1116
Mph1103I ATGCAT 2 cut(s) 277, 734
MroXI GAANNNNTTC 3 cut(s) 18, 591, 1611
MseI TTAA 6 cut(s) 63, 498, 960, 1040, 1065, 1475
MspI CCGG 1 cut(s) 1364
MvnI CGCG 1 cut(s) 1574
MwoI GCNNNNNNNGC 4 cut(s) 1291, 1444, 1461, 1976
NarI GGCGCC 1 cut(s) 1018
NdeI CATATG 1 cut(s) 600
NdeII GATC 9 cut(s) 412, 475, 508, 1083, 1220, 1247, 1569, 1743, 2046
NheI GCTAGC 1 cut(s) 1654
NlaIII CATG 9 cut(s) 169, 300, 509, 521, 658, 732, 1168, 1607, 1974
NlaIV GGNNCC 2 cut(s) 953, 1019
NsiI ATGCAT 2 cut(s) 277, 734
NspI RCATGY 3 cut(s) 169, 732, 1974
NspV TTCGAA 1 cut(s) 685
PaeI GCATGC 1 cut(s) 169
PaeR7I CTCGAG 4 cut(s) 736, 782, 1236, 1388
PagI TCATGA 1 cut(s) 1603
PcsI WCGNNNNNNNCGW 2 cut(s) 1197, 1243
PdmI GAANNNNTTC 3 cut(s) 18, 591, 1611
PfeI GAWTC 6 cut(s) 355, 709, 825, 1139, 1304, 1756
PflFI GACNNNGTC 1 cut(s) 901
PkrI GCNGC 4 cut(s) 1434, 1437, 1463, 1867
PleI GAGTC 2 cut(s) 1523, 1988
PluTI GGCGCC 1 cut(s) 1021
PpsI GAGTC 2 cut(s) 1523, 1988
PpuMI RGGWCCY 1 cut(s) 1232
PshAI GACNNNNGTC 1 cut(s) 601
PsiI TTATAA 1 cut(s) 491
Psp1406I AACGTT 1 cut(s) 715
Psp5II RGGWCCY 1 cut(s) 1232
PspFI CCCAGC 1 cut(s) 1554
PspN4I GGNNCC 2 cut(s) 953, 1019
PspPI GGNCC 2 cut(s) 1232, 1557
PspPPI RGGWCCY 1 cut(s) 1232
PspXI VCTCGAGB 2 cut(s) 1236, 1388
PstI CTGCAG 1 cut(s) 1312
PsuI RGATCY 3 cut(s) 475, 1083, 1743
PsyI GACNNNGTC 1 cut(s) 901
RsaI GTAC 4 cut(s) 551, 1577, 1669, 2038
RsaNI GTAC 4 cut(s) 550, 1576, 1668, 2037
SaqAI TTAA 6 cut(s) 63, 498, 960, 1040, 1065, 1475
SatI GCNGC 4 cut(s) 1433, 1436, 1462, 1866
Sau3AI GATC 9 cut(s) 412, 475, 508, 1083, 1220, 1247, 1569, 1743, 2046
Sau96I GGNCC 2 cut(s) 1232, 1557
ScaI AGTACT 1 cut(s) 551
SchI GAGTC 2 cut(s) 1523, 1988
SfaNI GCATC 4 cut(s) 45, 262, 741, 1759
SfcI CTRYAG 3 cut(s) 156, 1308, 1319
SfoI GGCGCC 1 cut(s) 1019
Sfr274I CTCGAG 4 cut(s) 736, 782, 1236, 1388
SfuI TTCGAA 1 cut(s) 685
SinI GGWCC 1 cut(s) 1232
SlaI CTCGAG 4 cut(s) 736, 782, 1236, 1388
SmlI CTYRAG 9 cut(s) 383, 659, 736, 782, 908, 926, 1236, 1388, 1693
SmoI CTYRAG 9 cut(s) 383, 659, 736, 782, 908, 926, 1236, 1388, 1693
SphI GCATGC 1 cut(s) 169
SsiI CCGC 3 cut(s) 754, 1436, 1725
SspDI GGCGCC 1 cut(s) 1017
SspI AATATT 1 cut(s) 244
SspMI CTAG 6 cut(s) 450, 576, 693, 761, 1655, 1862
StyI CCWWGG 2 cut(s) 939, 1289
TaaI ACNGT 3 cut(s) 157, 559, 1565
TaiI ACGT 3 cut(s) 718, 998, 1507
TatI WGTACW 2 cut(s) 549, 1667
TauI GCSGC 1 cut(s) 1438
TfiI GAWTC 6 cut(s) 355, 709, 825, 1139, 1304, 1756
Tru1I TTAA 6 cut(s) 63, 498, 960, 1040, 1065, 1475
Tru9I TTAA 6 cut(s) 63, 498, 960, 1040, 1065, 1475
TscAI CASTG 2 cut(s) 446, 1928
TseI GCWGC 3 cut(s) 1432, 1461, 1865
TspGWI ACGGA 2 cut(s) 557, 1779
TspRI CASTG 2 cut(s) 446, 1928
Tth111I GACNNNGTC 1 cut(s) 901
VpaK11BI GGWCC 1 cut(s) 1232
XapI RAATTY 3 cut(s) 335, 1264, 1810
XceI RCATGY 3 cut(s) 169, 732, 1974
XhoI CTCGAG 4 cut(s) 736, 782, 1236, 1388
XmnI GAANNNNTTC 3 cut(s) 18, 591, 1611
XspI CTAG 6 cut(s) 450, 576, 693, 761, 1655, 1862
ZrmI AGTACT 1 cut(s) 551
Zsp2I ATGCAT 2 cut(s) 277, 734
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.