Prupe.8G226700_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000837
Physical Location & Seq
Reverse (-)
20310995 .. 20312351
1357 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G226700.1

Sequence Viewer

Length: 1011 bp
ATGGCACCAGCACTCGTCGATTACGCCGCCGCTGAAAAAGAATTGTACGAGTTTGATGACCTCAAAATCGGTGTCAAAGGCCTCGTGGATGCTGGGGTGACCCACATTCCCAGGTTCTTCATCCACCCACCGGAGTGTCGTGCAAACAACTCATCAACTCCGCAGAAAAACGGCGCTGATGGAGTTGAAATCCCCGTCATCGATCTCCAAGGGTTTAACGAGAACGATGACCGGCGAGTAAAGATGGTCAATGCCATGAGATATGCATGCGCTACGTGGGGTTTCTTTCAGATAGTTAACCATGGAGTTCCAGTTGCTGTAATGGAGGAGATGGTGGAAAGTATAAGAAGGTTCCATGAGCAGCCCCAGGAGGCCAAGATGGAGTGGTACTCACGTGACTTTAGTCGCACGGTGAATTATTATAGCAGTGGAGATATCAAGGGGCGCGCACAACCAGTACCAGCTGAATGGAAGGACACTTTGTCCTGCAGAGCTGCAGATGATCAGTGGGATTTTGATGCACTTCCTGAATTGTGCAGGCACGAAATGAAGGAGTATATGAAAAACGTGATCGATCTGCAGGAAAAGCTATCTGAATTAATGTCAGAAGCGTTGGGGCTCAGTAAAGATCACCTATCGAGCACGGGGTACTTGAAGTCTATCAAGTTATCGGGTCACTATTACCCAGCTTGCCCTGAGCCCGATTTGACTCTAGGCACAATCAAACACTCGGACCCCTCCCTTCTCACCTTGGTCCTACAAGACAAGAGCAATGGCCTCCAAGTTCTCCATAATGATCTATGGGTTGATGTGCCCAAGGTGGACGGAGCTTTTGTGGCGAACATCGGTGACTTTATGCAGGATAGAATTAAGCCATGTGGACCAATCAAGGAGCTTCTCTCTGATAACAGTCCCCCCATATACAGGATTACATCTTATGAAGAGTTTATGAGGCATTACAGAGTTGTTGGGCAAATTGGCGGCCGTGCCCTGCCTCACTTTAAACTGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

337

Amino Acids

38.05

Weight (kDa)

5.41

Isoelectric Point (pI)

46.27

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 4
AccII CGCG 1 cut(s) 447
AciI CCGC 4 cut(s) 27, 30, 161, 981
AcoI YGGCCR 1 cut(s) 982
AcvI CACGTG 1 cut(s) 395
AfaI GTAC 4 cut(s) 47, 389, 459, 650
AfiI CCNNNNNNNGG 2 cut(s) 130, 924
AgsI TTSAA 2 cut(s) 188, 655
AhdI GACNNNNNGTC 1 cut(s) 481
AjnI CCWGG 2 cut(s) 110, 366
AleI CACNNNNGTG 1 cut(s) 133
AluBI AGCT 6 cut(s) 464, 494, 589, 689, 830, 895
AluI AGCT 6 cut(s) 464, 494, 589, 689, 830, 895
Alw21I GWGCWC 1 cut(s) 644
AlwNI CAGNNNCTG 1 cut(s) 317
AoxI GGCC 4 cut(s) 79, 372, 775, 982
ApeKI GCWGC 2 cut(s) 361, 494
ArsI GACNNNNNNTTYG 4 cut(s) 57, 89, 815, 847
AseI ATTAAT 1 cut(s) 599
AspLEI GCGC 4 cut(s) 176, 272, 447, 449
AspS9I GGNCC 3 cut(s) 733, 754, 881
AsuHPI GGTGA 5 cut(s) 109, 424, 623, 739, 860
AvaII GGWCC 3 cut(s) 733, 754, 881
BaeGI GKGCMC 2 cut(s) 816, 991
BaeI ACNNNNGTAYC 2 cut(s) 379, 412
BanI GGYRCC 1 cut(s) 4
BanII GRGCYC 2 cut(s) 621, 702
BauI CACGAG 1 cut(s) 83
BbrPI CACGTG 1 cut(s) 395
Bbv12I GWGCWC 1 cut(s) 644
BbvI GCAGC 2 cut(s) 373, 481
BccI CCATC 4 cut(s) 173, 238, 325, 373
BceAI ACGGC 2 cut(s) 187, 969
BciT130I CCWGG 2 cut(s) 112, 368
BclI TGATCA 1 cut(s) 502
BfaI CTAG 1 cut(s) 713
BfmI CTRYAG 4 cut(s) 487, 495, 578, 1007
BfoI RGCGCY 1 cut(s) 177
BisI GCNGC 5 cut(s) 27, 30, 362, 495, 982
BlsI GCNGC 5 cut(s) 28, 31, 363, 496, 983
Bme1390I CCNGG 2 cut(s) 112, 368
Bme18I GGWCC 3 cut(s) 733, 754, 881
BmeRI GACNNNNNGTC 1 cut(s) 481
BmgT120I GGNCC 3 cut(s) 733, 754, 881
BmiI GGNNCC 3 cut(s) 6, 353, 735
BmrFI CCNGG 2 cut(s) 112, 368
BmsI GCATC 2 cut(s) 79, 508
BoxI GACNNNNGTC 1 cut(s) 402
BplI GAGNNNNNCTC 4 cut(s) 374, 406, 884, 916
Bpu10I CCTNAGC 1 cut(s) 696
Bsa29I ATCGAT 2 cut(s) 201, 573
BsaAI YACGTR 2 cut(s) 276, 395
BsaJI CCNNGG 6 cut(s) 110, 208, 301, 366, 750, 816
BsaWI WCCGGW 1 cut(s) 130
BsaXI ACNNNNNCTCC 4 cut(s) 297, 327, 819, 849
Bsc4I CCNNNNNNNGG 2 cut(s) 130, 924
Bse118I RCCGGY 1 cut(s) 231
Bse1I ACTGG 2 cut(s) 311, 455
Bse3DI GCAATG 1 cut(s) 778
BseBI CCWGG 2 cut(s) 112, 368
BseCI ATCGAT 2 cut(s) 201, 573
BseDI CCNNGG 6 cut(s) 110, 208, 301, 366, 750, 816
BseGI GGATG 2 cut(s) 94, 120
BseLI CCNNNNNNNGG 2 cut(s) 130, 924
BseMI GCAATG 1 cut(s) 778
BseMII CTCAG 2 cut(s) 634, 687
BseNI ACTGG 2 cut(s) 311, 455
BsePI GCGCGC 1 cut(s) 445
BseRI GAGGAG 1 cut(s) 341
BseSI GKGCMC 2 cut(s) 816, 991
BseX3I CGGCCG 1 cut(s) 982
BseXI GCAGC 2 cut(s) 373, 481
BseYI CCCAGC 2 cut(s) 92, 685
BsgI GTGCAG 1 cut(s) 556
Bsh1236I CGCG 1 cut(s) 447
Bsh1285I CGRYCG 1 cut(s) 985
BshFI GGCC 4 cut(s) 81, 374, 777, 984
BshNI GGYRCC 1 cut(s) 4
BshVI ATCGAT 2 cut(s) 201, 573
BsiEI CGRYCG 1 cut(s) 985
BsiHKAI GWGCWC 1 cut(s) 644
BsiSI CCGG 2 cut(s) 131, 232
BslFI GGGAC 1 cut(s) 897
BslI CCNNNNNNNGG 2 cut(s) 130, 924
BsmFI GGGAC 1 cut(s) 897
BsnI GGCC 4 cut(s) 81, 374, 777, 984
Bsp1286I GDGCHC 5 cut(s) 621, 644, 702, 816, 991
Bsp143I GATC 6 cut(s) 202, 502, 570, 574, 628, 796
Bsp19I CCATGG 1 cut(s) 301
BspACI CCGC 4 cut(s) 27, 30, 161, 981
BspANI GGCC 4 cut(s) 81, 374, 777, 984
BspCNI CTCAG 2 cut(s) 633, 688
BspDI ATCGAT 2 cut(s) 201, 573
BspFNI CGCG 1 cut(s) 447
BspLI GGNNCC 3 cut(s) 6, 353, 735
BspMAI CTGCAG 3 cut(s) 491, 499, 582
BspT107I GGYRCC 1 cut(s) 4
BsrDI GCAATG 1 cut(s) 778
BsrFI RCCGGY 1 cut(s) 231
BsrI ACTGG 2 cut(s) 311, 455
BssAI RCCGGY 1 cut(s) 231
BssECI CCNNGG 6 cut(s) 110, 208, 301, 366, 750, 816
BssHII GCGCGC 1 cut(s) 445
BssMI GATC 6 cut(s) 202, 502, 570, 574, 628, 796
BssSI CACGAG 1 cut(s) 83
BssT1I CCWWGG 4 cut(s) 208, 301, 750, 816
Bst2BI CACGAG 1 cut(s) 83
Bst2UI CCWGG 2 cut(s) 112, 368
Bst4CI ACNGT 3 cut(s) 412, 911, 1008
Bst6I CTCTTC 1 cut(s) 936
BstBAI YACGTR 2 cut(s) 276, 395
BstC8I GCNNGC 4 cut(s) 268, 447, 539, 691
BstDEI CTNAG 2 cut(s) 620, 696
BstDSI CCRYGG 1 cut(s) 301
BstEII GGTNACC 1 cut(s) 97
BstF5I GGATG 2 cut(s) 94, 120
BstFNI CGCG 1 cut(s) 447
BstH2I RGCGCY 1 cut(s) 177
BstHHI GCGC 4 cut(s) 176, 272, 447, 449
BstKTI GATC 6 cut(s) 205, 505, 573, 577, 631, 799
BstMBI GATC 6 cut(s) 202, 502, 570, 574, 628, 796
BstMCI CGRYCG 1 cut(s) 985
BstMWI GCNNNNNNNGC 2 cut(s) 586, 836
BstNI CCWGG 2 cut(s) 112, 368
BstNSI RCATGY 1 cut(s) 270
BstPAI GACNNNNGTC 1 cut(s) 402
BstPI GGTNACC 1 cut(s) 97
BstSCI CCNGG 2 cut(s) 110, 366
BstSFI CTRYAG 4 cut(s) 487, 495, 578, 1007
BstSLI GKGCMC 2 cut(s) 816, 991
BstUI CGCG 1 cut(s) 447
BstV1I GCAGC 2 cut(s) 373, 481
BstXI CCANNNNNNTGG 1 cut(s) 468
BstZI CGGCCG 1 cut(s) 982
Bsu15I ATCGAT 2 cut(s) 201, 573
BsuRI GGCC 4 cut(s) 81, 374, 777, 984
BsuTUI ATCGAT 2 cut(s) 201, 573
BtgI CCRYGG 1 cut(s) 301
BtsCI GGATG 2 cut(s) 94, 120
BtsI GCAGTG 1 cut(s) 433
BtsIMutI CAGTG 2 cut(s) 433, 512
Cac8I GCNNGC 4 cut(s) 268, 447, 539, 691
CaiI CAGNNNCTG 1 cut(s) 317
CfoI GCGC 4 cut(s) 176, 272, 447, 449
Cfr10I RCCGGY 1 cut(s) 231
Cfr13I GGNCC 3 cut(s) 733, 754, 881
ClaI ATCGAT 2 cut(s) 201, 573
Csp6I GTAC 4 cut(s) 46, 388, 458, 649
CviAII CATG 5 cut(s) 256, 267, 302, 356, 876
CviQI GTAC 4 cut(s) 46, 388, 458, 649
DdeI CTNAG 2 cut(s) 620, 696
DpnI GATC 6 cut(s) 204, 504, 572, 576, 630, 798
DpnII GATC 6 cut(s) 202, 502, 570, 574, 628, 796
DraI TTTAAA 1 cut(s) 1003
DriI GACNNNNNGTC 1 cut(s) 481
EaeI YGGCCR 1 cut(s) 982
EagI CGGCCG 1 cut(s) 982
Eam1104I CTCTTC 1 cut(s) 936
Eam1105I GACNNNNNGTC 1 cut(s) 481
EarI CTCTTC 1 cut(s) 936
EclXI CGGCCG 1 cut(s) 982
Eco130I CCWWGG 4 cut(s) 208, 301, 750, 816
Eco147I AGGCCT 1 cut(s) 81
Eco24I GRGCYC 2 cut(s) 621, 702
Eco32I GATATC 1 cut(s) 436
Eco47I GGWCC 3 cut(s) 733, 754, 881
Eco52I CGGCCG 1 cut(s) 982
Eco72I CACGTG 1 cut(s) 395
Eco91I GGTNACC 1 cut(s) 97
EcoO65I GGTNACC 1 cut(s) 97
EcoRII CCWGG 2 cut(s) 110, 366
EcoRV GATATC 1 cut(s) 436
EcoT14I CCWWGG 4 cut(s) 208, 301, 750, 816
EcoT22I ATGCAT 1 cut(s) 268
EcoT38I GRGCYC 2 cut(s) 621, 702
ErhI CCWWGG 4 cut(s) 208, 301, 750, 816
FaeI CATG 5 cut(s) 259, 270, 305, 359, 879
FaqI GGGAC 1 cut(s) 897
FatI CATG 5 cut(s) 255, 266, 301, 355, 875
FbaI TGATCA 1 cut(s) 502
Fnu4HI GCNGC 5 cut(s) 27, 30, 362, 495, 982
FokI GGATG 2 cut(s) 101, 107
FriOI GRGCYC 2 cut(s) 621, 702
Fsp4HI GCNGC 5 cut(s) 27, 30, 362, 495, 982
FspBI CTAG 1 cut(s) 713
GlaI GCGC 4 cut(s) 175, 271, 446, 448
GluI GCNGC 5 cut(s) 27, 30, 362, 495, 982
GsaI CCCAGC 2 cut(s) 96, 689
HaeII RGCGCY 1 cut(s) 177
HaeIII GGCC 4 cut(s) 81, 374, 777, 984
HapII CCGG 2 cut(s) 131, 232
HhaI GCGC 4 cut(s) 176, 272, 447, 449
Hin1II CATG 5 cut(s) 259, 270, 305, 359, 879
Hin6I GCGC 4 cut(s) 174, 270, 445, 447
HinP1I GCGC 4 cut(s) 174, 270, 445, 447
HincII GTYRAC 1 cut(s) 298
HindII GTYRAC 1 cut(s) 298
HinfI GANTC 1 cut(s) 709
HpaI GTTAAC 1 cut(s) 298
HpaII CCGG 2 cut(s) 131, 232
HphI GGTGA 5 cut(s) 109, 424, 623, 739, 860
Hpy166II GTNNAC 3 cut(s) 298, 823, 881
Hpy188I TCNGA 5 cut(s) 291, 595, 607, 733, 904
Hpy188III TCNNGA 1 cut(s) 527
Hpy8I GTNNAC 3 cut(s) 298, 823, 881
Hpy99I CGWCG 1 cut(s) 20
HpyAV CCTTC 4 cut(s) 342, 466, 544, 752
HpyCH4III ACNGT 3 cut(s) 412, 911, 1008
HpyCH4IV ACGT 3 cut(s) 275, 394, 567
HpyCH4V TGCA 8 cut(s) 143, 266, 489, 497, 521, 537, 580, 859
HpyF10VI GCNNNNNNNGC 2 cut(s) 586, 836
HpyF3I CTNAG 2 cut(s) 620, 696
HpySE526I ACGT 3 cut(s) 275, 394, 567
Hsp92II CATG 5 cut(s) 259, 270, 305, 359, 879
HspAI GCGC 4 cut(s) 174, 270, 445, 447
Ksp22I TGATCA 1 cut(s) 502
KspAI GTTAAC 1 cut(s) 298
Kzo9I GATC 6 cut(s) 202, 502, 570, 574, 628, 796
LmnI GCTCC 2 cut(s) 827, 892
Lsp1109I GCAGC 2 cut(s) 373, 481
LweI GCATC 2 cut(s) 79, 508
MaeI CTAG 1 cut(s) 713
MaeII ACGT 3 cut(s) 275, 394, 567
MaeIII GTNAC 4 cut(s) 97, 395, 674, 848
MalI GATC 6 cut(s) 204, 504, 572, 576, 630, 798
MboI GATC 6 cut(s) 202, 502, 570, 574, 628, 796
MboII GAAGA 2 cut(s) 109, 953
MhlI GDGCHC 5 cut(s) 621, 644, 702, 816, 991
MluCI AATT 6 cut(s) 41, 415, 530, 596, 867, 975
MlyI GAGTC 1 cut(s) 703
MnlI CCTC 8 cut(s) 71, 92, 319, 364, 748, 788, 945, 1005
Mph1103I ATGCAT 1 cut(s) 268
MseI TTAA 5 cut(s) 216, 297, 599, 870, 1002
MslI CAYNNNNRTG 1 cut(s) 133
MspA1I CMGCKG 2 cut(s) 32, 464
MspI CCGG 2 cut(s) 131, 232
MspR9I CCNGG 2 cut(s) 112, 368
MvaI CCWGG 2 cut(s) 112, 368
MvnI CGCG 1 cut(s) 447
MwoI GCNNNNNNNGC 2 cut(s) 586, 836
NcoI CCATGG 1 cut(s) 301
NdeII GATC 6 cut(s) 202, 502, 570, 574, 628, 796
NlaIII CATG 5 cut(s) 259, 270, 305, 359, 879
NlaIV GGNNCC 3 cut(s) 6, 353, 735
NmuCI GTSAC 4 cut(s) 97, 395, 674, 848
NsiI ATGCAT 1 cut(s) 268
NspI RCATGY 1 cut(s) 270
OliI CACNNNNGTG 1 cut(s) 133
PaeI GCATGC 1 cut(s) 270
PauI GCGCGC 1 cut(s) 445
PceI AGGCCT 1 cut(s) 81
PkrI GCNGC 5 cut(s) 28, 31, 363, 496, 983
PleI GAGTC 1 cut(s) 703
PmaCI CACGTG 1 cut(s) 395
PmlI CACGTG 1 cut(s) 395
PpsI GAGTC 1 cut(s) 703
Ppu21I YACGTR 2 cut(s) 276, 395
PshAI GACNNNNGTC 1 cut(s) 402
PshBI ATTAAT 1 cut(s) 599
Psp6I CCWGG 2 cut(s) 110, 366
PspCI CACGTG 1 cut(s) 395
PspEI GGTNACC 1 cut(s) 97
PspFI CCCAGC 2 cut(s) 92, 685
PspGI CCWGG 2 cut(s) 110, 366
PspN4I GGNNCC 3 cut(s) 6, 353, 735
PspPI GGNCC 3 cut(s) 733, 754, 881
PstI CTGCAG 3 cut(s) 491, 499, 582
PstNI CAGNNNCTG 1 cut(s) 317
PteI GCGCGC 1 cut(s) 445
PvuII CAGCTG 1 cut(s) 464
RsaI GTAC 4 cut(s) 47, 389, 459, 650
RsaNI GTAC 4 cut(s) 46, 388, 458, 649
RseI CAYNNNNRTG 1 cut(s) 133
SaqAI TTAA 5 cut(s) 216, 297, 599, 870, 1002
SatI GCNGC 5 cut(s) 27, 30, 362, 495, 982
Sau3AI GATC 6 cut(s) 202, 502, 570, 574, 628, 796
Sau96I GGNCC 3 cut(s) 733, 754, 881
SchI GAGTC 1 cut(s) 703
ScrFI CCNGG 2 cut(s) 112, 368
SduI GDGCHC 5 cut(s) 621, 644, 702, 816, 991
SfaNI GCATC 2 cut(s) 79, 508
SfcI CTRYAG 4 cut(s) 487, 495, 578, 1007
SinI GGWCC 3 cut(s) 733, 754, 881
SmiMI CAYNNNNRTG 1 cut(s) 133
SphI GCATGC 1 cut(s) 270
Sse9I AATT 6 cut(s) 41, 415, 530, 596, 867, 975
SseBI AGGCCT 1 cut(s) 81
SsiI CCGC 4 cut(s) 27, 30, 161, 981
SspMI CTAG 1 cut(s) 713
StuI AGGCCT 1 cut(s) 81
StyD4I CCNGG 2 cut(s) 110, 366
StyI CCWWGG 4 cut(s) 208, 301, 750, 816
TaaI ACNGT 3 cut(s) 412, 911, 1008
TaiI ACGT 3 cut(s) 278, 397, 570
TaqI TCGA 4 cut(s) 18, 201, 573, 638
TasI AATT 6 cut(s) 41, 415, 530, 596, 867, 975
TauI GCSGC 3 cut(s) 29, 32, 984
Tru1I TTAA 5 cut(s) 216, 297, 599, 870, 1002
Tru9I TTAA 5 cut(s) 216, 297, 599, 870, 1002
TscAI CASTG 2 cut(s) 433, 512
TseFI GTSAC 4 cut(s) 97, 395, 674, 848
TseI GCWGC 2 cut(s) 361, 494
Tsp45I GTSAC 4 cut(s) 97, 395, 674, 848
TspDTI ATGAA 4 cut(s) 109, 563, 575, 954
TspGWI ACGGA 1 cut(s) 840
TspRI CASTG 2 cut(s) 433, 512
VpaK11BI GGWCC 3 cut(s) 733, 754, 881
VspI ATTAAT 1 cut(s) 599
XceI RCATGY 1 cut(s) 270
XspI CTAG 1 cut(s) 713
Zsp2I ATGCAT 1 cut(s) 268
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.