Rh6AG309300

Belongs to the iron ascorbate-dependent oxidoreductase family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6A
Physical Location & Seq
Forward (+)
50727838 .. 50742943
15106 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6AG309300.1

Sequence Viewer

Length: 255 bp
ATGGAGGAGATGCTTGAAGGTATTCGTAGATTTCATGAGCAGCCTGCAGAAGACAAGATGGAGTTGTACTCTCGTGACTTCAAGAATCCGGTAAACTTTTATTGCAGTGGAGATATGAAATTGCTTGCAAAATCAGCAGCAGACTGGAGAGACACCTTATTCTGCAGAGAAGTAGATGATGAATGGGATTTTGAAGCACTGCCTCAAGAGTCCACCAAAGAACTCAGCATGGCTGAGACAGATGATAAAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

84

Amino Acids

9.93

Weight (kDa)

4.36

Isoelectric Point (pI)

36.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 68
AgsI TTSAA 3 cut(s) 17, 82, 194
AluBI AGCT 1 cut(s) 251
AluI AGCT 1 cut(s) 251
Alw26I GTCTC 2 cut(s) 144, 230
ApeKI GCWGC 2 cut(s) 40, 137
Asp700I GAANNNNTTC 1 cut(s) 21
BauI CACGAG 1 cut(s) 72
BbsI GAAGAC 1 cut(s) 57
BbvI GCAGC 2 cut(s) 52, 149
BccI CCATC 1 cut(s) 52
BcoDI GTCTC 2 cut(s) 144, 230
BfmI CTRYAG 2 cut(s) 45, 163
BisI GCNGC 2 cut(s) 41, 138
BlsI GCNGC 2 cut(s) 42, 139
BpiI GAAGAC 1 cut(s) 57
BplI GAGNNNNNCTC 2 cut(s) 53, 85
BpmI CTGGAG 1 cut(s) 166
BpuEI CTTGAG 1 cut(s) 189
BsaWI WCCGGW 1 cut(s) 88
Bse1I ACTGG 1 cut(s) 149
BseMII CTCAG 2 cut(s) 225, 238
BseNI ACTGG 1 cut(s) 149
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 2 cut(s) 52, 149
BsiSI CCGG 1 cut(s) 89
BsmAI GTCTC 2 cut(s) 144, 230
BspCNI CTCAG 2 cut(s) 226, 237
BspHI TCATGA 1 cut(s) 34
BspMAI CTGCAG 2 cut(s) 49, 167
BsrI ACTGG 1 cut(s) 149
BssSI CACGAG 1 cut(s) 72
Bst2BI CACGAG 1 cut(s) 72
BstC8I GCNNGC 2 cut(s) 45, 126
BstDEI CTNAG 2 cut(s) 224, 234
BstMAI GTCTC 2 cut(s) 144, 230
BstMWI GCNNNNNNNGC 1 cut(s) 134
BstSFI CTRYAG 2 cut(s) 45, 163
BstV1I GCAGC 2 cut(s) 52, 149
BstV2I GAAGAC 1 cut(s) 57
BtsI GCAGTG 2 cut(s) 112, 197
BtsIMutI CAGTG 2 cut(s) 112, 197
Cac8I GCNNGC 2 cut(s) 45, 126
CciI TCATGA 1 cut(s) 34
Csp6I GTAC 1 cut(s) 67
CviAII CATG 2 cut(s) 35, 229
CviJI RGCY 3 cut(s) 43, 233, 251
CviKI_1 RGCY 3 cut(s) 43, 233, 251
CviQI GTAC 1 cut(s) 67
DdeI CTNAG 2 cut(s) 224, 234
FaeI CATG 2 cut(s) 38, 232
FaiI YATR 3 cut(s) 36, 116, 230
FatI CATG 2 cut(s) 34, 228
Fnu4HI GCNGC 2 cut(s) 41, 138
Fsp4HI GCNGC 2 cut(s) 41, 138
GluI GCNGC 2 cut(s) 41, 138
GsuI CTGGAG 1 cut(s) 166
HapII CCGG 1 cut(s) 89
Hin1II CATG 2 cut(s) 38, 232
HindIII AAGCTT 1 cut(s) 249
HinfI GANTC 2 cut(s) 85, 209
HpaII CCGG 1 cut(s) 89
Hpy166II GTNNAC 2 cut(s) 94, 213
Hpy188III TCNNGA 4 cut(s) 35, 74, 82, 206
Hpy8I GTNNAC 2 cut(s) 94, 213
HpyAV CCTTC 1 cut(s) 11
HpyCH4V TGCA 4 cut(s) 47, 105, 128, 165
HpyF10VI GCNNNNNNNGC 1 cut(s) 134
HpyF3I CTNAG 2 cut(s) 224, 234
Hsp92II CATG 2 cut(s) 38, 232
LpnPI CCDG 3 cut(s) 57, 102, 130
Lsp1109I GCAGC 2 cut(s) 52, 149
MaeIII GTNAC 1 cut(s) 74
MboII GAAGA 1 cut(s) 62
MluCI AATT 1 cut(s) 119
MlyI GAGTC 1 cut(s) 218
MnlI CCTC 1 cut(s) 213
MroXI GAANNNNTTC 1 cut(s) 21
MseI TTAA 1 cut(s) 253
MspI CCGG 1 cut(s) 89
MwoI GCNNNNNNNGC 1 cut(s) 134
NlaIII CATG 2 cut(s) 38, 232
NmuCI GTSAC 1 cut(s) 74
PagI TCATGA 1 cut(s) 34
PdmI GAANNNNTTC 1 cut(s) 21
PfeI GAWTC 1 cut(s) 85
PkrI GCNGC 2 cut(s) 42, 139
PleI GAGTC 1 cut(s) 217
PpsI GAGTC 1 cut(s) 217
PstI CTGCAG 2 cut(s) 49, 167
RsaI GTAC 1 cut(s) 68
RsaNI GTAC 1 cut(s) 67
SaqAI TTAA 1 cut(s) 253
SatI GCNGC 2 cut(s) 41, 138
SchI GAGTC 1 cut(s) 218
SetI ASST 3 cut(s) 22, 158, 253
SfcI CTRYAG 2 cut(s) 45, 163
SmlI CTYRAG 1 cut(s) 204
SmoI CTYRAG 1 cut(s) 204
Sse9I AATT 1 cut(s) 119
TasI AATT 1 cut(s) 119
TatI WGTACW 1 cut(s) 66
TfiI GAWTC 1 cut(s) 85
Tru1I TTAA 1 cut(s) 253
Tru9I TTAA 1 cut(s) 253
TscAI CASTG 2 cut(s) 112, 204
TseFI GTSAC 1 cut(s) 74
TseI GCWGC 2 cut(s) 40, 137
Tsp45I GTSAC 1 cut(s) 74
TspDTI ATGAA 3 cut(s) 23, 131, 195
TspRI CASTG 2 cut(s) 112, 204
XmnI GAANNNNTTC 1 cut(s) 21
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.