Prupe.8G226800_v2.0.a1

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
OG0000837
Physical Location & Seq
Reverse (-)
20315431 .. 20317021
1591 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G226800.1

Sequence Viewer

Length: 1038 bp
ATGGCAGTTGTGGACTGTGAGCTGGAGAAGGAATTGAAACAATTCGATGAAACAAAAGCTGGTGTCAAAGGCCTGGTAGACGCTGGGGTGACCAAGCTCCCAAGAATGTTCAGACACCCTCCAGAGACCCTACCTTCCCCAAACCAAAACAATGGCGTTGACTCCAACCTCCAAGTTCCTGTCATTGATCTCAAGGATGTCGACATCTGCGACAGGCGAAAAGAGATCATCAACGACCTTCGAAAAGCAGCTGAAGAATGGGGTTTCTTTCAGATTGTGAATCATGGAATTCCAATTGCTGTCATGGATGAGGTGCTCAAAGGTGTTCGAGGTTTTCATGAGCTTCCCCAGGAGGCCAAGGAGGAGTGGTATTCGCGCGATTTTAAGAAGAAGGTCAACTTCTTCAGCAATGGAGAATTGAAAGTTTCGACCCCGGCTGATTGGAGAGACACCTTGTCATGCAAGGTCCTAGAAGATGAATGTAACTTTGAAGCCATCCCCGAAGTTTGCAGAGAGCAGGTACGCGAGTATATGAAATACATCGTTAAAGTGCAAGAGAAGCTATCCAAATTATTTTCGGAAGCTTTAGGGCTGGACAGTGATTACCTTGAGAACCTAAGGTGCTTCAAATCGAGGTCACTGGCATGCCACTATTACCCGGTTTGCCCCGATCCCCATTTGACTCTAGGAGGTACCAGGCACTCCGACCTCGGCTTCCTCACCTTGCTCCTCCAAGACAGCAGCGGCCTGCAAGTTCTTCATGACAATGTTTGGATCGACGTGCCCCCAGTTGAGGGAGCTTTGCTTACCAATCTTGCCGACATGTTGCAGATTGTTACTAATGGCAAGTTCAAGAGTGTAGAGCACAGAGTTTTGATGCCAGCGACCCTCGAGCCTCGTACATCAATTGCATGTTTTGTTGGTACCGACGACCTCCAGAAACCATATGGGCCGATAAAGGAGCTTATTTCCGAAGACAATCCGGCAATTTACAAAGAAGTTCTATTTGGAGAATACATGAACCGCTACAAACTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

346

Amino Acids

39.29

Weight (kDa)

5.2

Isoelectric Point (pI)

36.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 508
Acc65I GGTACC 2 cut(s) 692, 923
AccB1I GGYRCC 2 cut(s) 692, 923
AccI GTMKAC 2 cut(s) 78, 201
AccII CGCG 3 cut(s) 376, 378, 525
AciI CCGC 2 cut(s) 744, 1024
AclWI GGATC 2 cut(s) 665, 782
AcsI RAATTY 1 cut(s) 288
AcuI CTGAAG 2 cut(s) 273, 388
AfaI GTAC 4 cut(s) 522, 694, 901, 925
AfiI CCNNNNNNNGG 2 cut(s) 793, 794
AflIII ACRYGT 1 cut(s) 822
AgsI TTSAA 5 cut(s) 37, 421, 491, 628, 853
AhdI GACNNNNNGTC 1 cut(s) 454
AjiI CACGTC 1 cut(s) 781
AjnI CCWGG 3 cut(s) 72, 348, 695
AjuI GAANNNNNNNTTGG 2 cut(s) 990, 1022
AluBI AGCT 9 cut(s) 22, 59, 97, 251, 343, 562, 584, 800, 964
AluI AGCT 9 cut(s) 22, 59, 97, 251, 343, 562, 584, 800, 964
Alw21I GWGCWC 2 cut(s) 318, 867
Alw26I GTCTC 2 cut(s) 119, 441
AlwI GGATC 2 cut(s) 665, 782
Ama87I CYCGRG 1 cut(s) 890
AoxI GGCC 4 cut(s) 70, 354, 745, 950
ApeKI GCWGC 2 cut(s) 248, 741
ApoI RAATTY 1 cut(s) 288
Asp700I GAANNNNTTC 1 cut(s) 41
Asp718I GGTACC 2 cut(s) 692, 923
AspLEI GCGC 1 cut(s) 378
AspS9I GGNCC 2 cut(s) 466, 950
AsuC2I CCSGG 2 cut(s) 434, 659
AsuHPI GGTGA 2 cut(s) 100, 712
AsuII TTCGAA 1 cut(s) 241
AvaI CYCGRG 1 cut(s) 890
AvaII GGWCC 1 cut(s) 466
AxyI CCTNAGG 1 cut(s) 617
BaeGI GKGCMC 1 cut(s) 786
BaeI ACNNNNGTAYC 2 cut(s) 512, 545
BanI GGYRCC 2 cut(s) 692, 923
BbsI GAAGAC 1 cut(s) 981
Bbv12I GWGCWC 2 cut(s) 318, 867
BbvI GCAGC 2 cut(s) 260, 753
BccI CCATC 1 cut(s) 503
BciT130I CCWGG 3 cut(s) 74, 350, 697
BcnI CCSGG 2 cut(s) 434, 659
BcoDI GTCTC 2 cut(s) 119, 441
BfaI CTAG 2 cut(s) 470, 686
BfmI CTRYAG 1 cut(s) 1034
BfuAI ACCTGC 1 cut(s) 508
BisI GCNGC 3 cut(s) 249, 742, 745
BlsI GCNGC 3 cut(s) 250, 743, 746
Bme1390I CCNGG 5 cut(s) 74, 350, 434, 659, 697
Bme18I GGWCC 1 cut(s) 466
BmeRI GACNNNNNGTC 1 cut(s) 454
BmeT110I CYCGRG 1 cut(s) 890
BmgBI CACGTC 1 cut(s) 781
BmgT120I GGNCC 2 cut(s) 466, 950
BmiI GGNNCC 2 cut(s) 694, 925
BmrFI CCNGG 5 cut(s) 74, 350, 434, 659, 697
BmrI ACTGGG 1 cut(s) 782
BmsI GCATC 1 cut(s) 867
BmuI ACTGGG 1 cut(s) 782
BpiI GAAGAC 1 cut(s) 981
BpmI CTGGAG 3 cut(s) 44, 105, 920
Bpu14I TTCGAA 1 cut(s) 241
BpuEI CTTGAG 2 cut(s) 176, 629
BpuMI CCSGG 2 cut(s) 434, 659
BsaI GGTCTC 1 cut(s) 119
BsaJI CCNNGG 4 cut(s) 348, 357, 432, 709
BsaXI ACNNNNNCTCC 2 cut(s) 353, 383
Bsc4I CCNNNNNNNGG 2 cut(s) 793, 794
Bse1I ACTGG 2 cut(s) 645, 788
Bse21I CCTNAGG 1 cut(s) 617
Bse3DI GCAATG 1 cut(s) 415
BseBI CCWGG 3 cut(s) 74, 350, 697
BseDI CCNNGG 4 cut(s) 348, 357, 432, 709
BseGI GGATG 3 cut(s) 202, 313, 495
BseLI CCNNNNNNNGG 2 cut(s) 793, 794
BseMI GCAATG 1 cut(s) 415
BseNI ACTGG 2 cut(s) 645, 788
BseRI GAGGAG 2 cut(s) 377, 719
BseSI GKGCMC 1 cut(s) 786
BseXI GCAGC 2 cut(s) 260, 753
BseYI CCCAGC 1 cut(s) 83
Bsh1236I CGCG 3 cut(s) 376, 378, 525
BshFI GGCC 4 cut(s) 72, 356, 747, 952
BshNI GGYRCC 2 cut(s) 692, 923
BsiHKAI GWGCWC 2 cut(s) 318, 867
BsiHKCI CYCGRG 1 cut(s) 890
BsiSI CCGG 3 cut(s) 434, 659, 983
BslI CCNNNNNNNGG 2 cut(s) 793, 794
BsmAI GTCTC 2 cut(s) 119, 441
BsnI GGCC 4 cut(s) 72, 356, 747, 952
Bso31I GGTCTC 1 cut(s) 119
BsoBI CYCGRG 1 cut(s) 890
Bsp119I TTCGAA 1 cut(s) 241
Bsp1286I GDGCHC 3 cut(s) 318, 786, 867
Bsp143I GATC 4 cut(s) 187, 225, 670, 774
BspACI CCGC 2 cut(s) 744, 1024
BspANI GGCC 4 cut(s) 72, 356, 747, 952
BspFNI CGCG 3 cut(s) 376, 378, 525
BspHI TCATGA 2 cut(s) 337, 760
BspLI GGNNCC 2 cut(s) 694, 925
BspMI ACCTGC 1 cut(s) 508
BspPI GGATC 2 cut(s) 665, 782
BspT104I TTCGAA 1 cut(s) 241
BspT107I GGYRCC 2 cut(s) 692, 923
BspTNI GGTCTC 1 cut(s) 119
BsrDI GCAATG 1 cut(s) 415
BsrI ACTGG 2 cut(s) 645, 788
BssECI CCNNGG 4 cut(s) 348, 357, 432, 709
BssMI GATC 4 cut(s) 187, 225, 670, 774
BssT1I CCWWGG 1 cut(s) 357
Bst2UI CCWGG 3 cut(s) 74, 350, 697
Bst4CI ACNGT 2 cut(s) 17, 599
BstBI TTCGAA 1 cut(s) 241
BstC8I GCNNGC 3 cut(s) 646, 749, 882
BstDEI CTNAG 1 cut(s) 617
BstEII GGTNACC 1 cut(s) 88
BstF5I GGATG 3 cut(s) 202, 313, 495
BstFNI CGCG 3 cut(s) 376, 378, 525
BstHHI GCGC 1 cut(s) 378
BstKTI GATC 4 cut(s) 190, 228, 673, 777
BstMAI GTCTC 2 cut(s) 119, 441
BstMBI GATC 4 cut(s) 187, 225, 670, 774
BstMWI GCNNNNNNNGC 1 cut(s) 559
BstNI CCWGG 3 cut(s) 74, 350, 697
BstNSI RCATGY 3 cut(s) 648, 826, 915
BstPI GGTNACC 1 cut(s) 88
BstSCI CCNGG 5 cut(s) 72, 348, 432, 657, 695
BstSFI CTRYAG 1 cut(s) 1034
BstSLI GKGCMC 1 cut(s) 786
BstUI CGCG 3 cut(s) 376, 378, 525
BstV1I GCAGC 2 cut(s) 260, 753
BstV2I GAAGAC 1 cut(s) 981
BstXI CCANNNNNNTGG 1 cut(s) 152
Bsu36I CCTNAGG 1 cut(s) 617
BsuRI GGCC 4 cut(s) 72, 356, 747, 952
BtrI CACGTC 1 cut(s) 781
BtsCI GGATG 3 cut(s) 202, 313, 495
BtsIMutI CAGTG 2 cut(s) 604, 638
BveI ACCTGC 1 cut(s) 508
Cac8I GCNNGC 3 cut(s) 646, 749, 882
CciI TCATGA 2 cut(s) 337, 760
CfoI GCGC 1 cut(s) 378
Cfr13I GGNCC 2 cut(s) 466, 950
CseI GACGC 1 cut(s) 89
Csp6I GTAC 4 cut(s) 521, 693, 900, 924
CviAII CATG 9 cut(s) 284, 304, 338, 459, 645, 761, 823, 912, 1018
CviQI GTAC 4 cut(s) 521, 693, 900, 924
DdeI CTNAG 1 cut(s) 617
DpnI GATC 4 cut(s) 189, 227, 672, 776
DpnII GATC 4 cut(s) 187, 225, 670, 774
DriI GACNNNNNGTC 1 cut(s) 454
Eam1105I GACNNNNNGTC 1 cut(s) 454
Eco130I CCWWGG 1 cut(s) 357
Eco147I AGGCCT 1 cut(s) 72
Eco31I GGTCTC 1 cut(s) 119
Eco47I GGWCC 1 cut(s) 466
Eco57I CTGAAG 2 cut(s) 273, 388
Eco81I CCTNAGG 1 cut(s) 617
Eco88I CYCGRG 1 cut(s) 890
Eco91I GGTNACC 1 cut(s) 88
EcoO109I RGGNCCY 1 cut(s) 466
EcoO65I GGTNACC 1 cut(s) 88
EcoRI GAATTC 1 cut(s) 288
EcoRII CCWGG 3 cut(s) 72, 348, 695
EcoT14I CCWWGG 1 cut(s) 357
ErhI CCWWGG 1 cut(s) 357
FaeI CATG 9 cut(s) 287, 307, 341, 462, 648, 764, 826, 915, 1021
FalI AAGNNNNNCTT 2 cut(s) 383, 415
FatI CATG 9 cut(s) 283, 303, 337, 458, 644, 760, 822, 911, 1017
FauNDI CATATG 1 cut(s) 946
FblI GTMKAC 2 cut(s) 78, 201
Fnu4HI GCNGC 3 cut(s) 249, 742, 745
FokI GGATG 3 cut(s) 209, 320, 482
Fsp4HI GCNGC 3 cut(s) 249, 742, 745
FspBI CTAG 2 cut(s) 470, 686
GlaI GCGC 1 cut(s) 377
GluI GCNGC 3 cut(s) 249, 742, 745
GsaI CCCAGC 1 cut(s) 87
GsuI CTGGAG 3 cut(s) 44, 105, 920
HaeIII GGCC 4 cut(s) 72, 356, 747, 952
HapII CCGG 3 cut(s) 434, 659, 983
HgaI GACGC 1 cut(s) 89
HhaI GCGC 1 cut(s) 378
Hin1II CATG 9 cut(s) 287, 307, 341, 462, 648, 764, 826, 915, 1021
Hin6I GCGC 1 cut(s) 376
HinP1I GCGC 1 cut(s) 376
HincII GTYRAC 3 cut(s) 160, 202, 397
HindII GTYRAC 3 cut(s) 160, 202, 397
HindIII AAGCTT 1 cut(s) 582
HinfI GANTC 3 cut(s) 161, 280, 682
HpaII CCGG 3 cut(s) 434, 659, 983
HphI GGTGA 2 cut(s) 100, 712
Hpy166II GTNNAC 5 cut(s) 13, 79, 160, 202, 397
Hpy188I TCNGA 5 cut(s) 113, 273, 580, 706, 973
Hpy188III TCNNGA 5 cut(s) 122, 338, 761, 853, 937
Hpy8I GTNNAC 5 cut(s) 13, 79, 160, 202, 397
Hpy99I CGWCG 2 cut(s) 782, 932
HpyAV CCTTC 4 cut(s) 22, 144, 248, 385
HpyCH4III ACNGT 2 cut(s) 17, 599
HpyCH4IV ACGT 1 cut(s) 780
HpyCH4V TGCA 6 cut(s) 462, 510, 553, 751, 829, 911
HpyF10VI GCNNNNNNNGC 1 cut(s) 559
HpyF3I CTNAG 1 cut(s) 617
HpySE526I ACGT 1 cut(s) 780
Hsp92II CATG 9 cut(s) 287, 307, 341, 462, 648, 764, 826, 915, 1021
HspAI GCGC 1 cut(s) 376
KpnI GGTACC 2 cut(s) 696, 927
Kzo9I GATC 4 cut(s) 187, 225, 670, 774
LmnI GCTCC 4 cut(s) 102, 732, 797, 961
Lsp1109I GCAGC 2 cut(s) 260, 753
LweI GCATC 1 cut(s) 867
MaeI CTAG 2 cut(s) 470, 686
MaeII ACGT 1 cut(s) 780
MaeIII GTNAC 4 cut(s) 88, 482, 636, 835
MalI GATC 4 cut(s) 189, 227, 672, 776
MboI GATC 4 cut(s) 187, 225, 670, 774
MboII GAAGA 6 cut(s) 266, 394, 400, 485, 749, 986
MfeI CAATTG 2 cut(s) 294, 906
MhlI GDGCHC 3 cut(s) 318, 786, 867
MluCI AATT 8 cut(s) 32, 41, 288, 294, 416, 569, 906, 987
MlyI GAGTC 2 cut(s) 155, 676
MmeI TCCRAC 2 cut(s) 189, 729
MroXI GAANNNNTTC 1 cut(s) 41
MseI TTAA 2 cut(s) 384, 546
MslI CAYNNNNRTG 2 cut(s) 643, 765
MspA1I CMGCKG 2 cut(s) 251, 744
MspI CCGG 3 cut(s) 434, 659, 983
MspR9I CCNGG 5 cut(s) 74, 350, 434, 659, 697
MunI CAATTG 2 cut(s) 294, 906
MvaI CCWGG 3 cut(s) 74, 350, 697
MvnI CGCG 3 cut(s) 376, 378, 525
MwoI GCNNNNNNNGC 1 cut(s) 559
NciI CCSGG 2 cut(s) 434, 659
NdeI CATATG 1 cut(s) 946
NdeII GATC 4 cut(s) 187, 225, 670, 774
NlaIII CATG 9 cut(s) 287, 307, 341, 462, 648, 764, 826, 915, 1021
NlaIV GGNNCC 2 cut(s) 694, 925
NmeAIII GCCGAG 1 cut(s) 690
NmuCI GTSAC 2 cut(s) 88, 636
NspI RCATGY 3 cut(s) 648, 826, 915
NspV TTCGAA 1 cut(s) 241
PaeI GCATGC 1 cut(s) 648
PaeR7I CTCGAG 1 cut(s) 890
PagI TCATGA 2 cut(s) 337, 760
PceI AGGCCT 1 cut(s) 72
PciI ACATGT 1 cut(s) 822
PcsI WCGNNNNNNNCGW 1 cut(s) 207
PdmI GAANNNNTTC 1 cut(s) 41
PfeI GAWTC 1 cut(s) 280
PkrI GCNGC 3 cut(s) 250, 743, 746
PleI GAGTC 2 cut(s) 155, 676
PpsI GAGTC 2 cut(s) 155, 676
PpuMI RGGWCCY 1 cut(s) 466
PscI ACATGT 1 cut(s) 822
Psp5II RGGWCCY 1 cut(s) 466
Psp6I CCWGG 3 cut(s) 72, 348, 695
PspEI GGTNACC 1 cut(s) 88
PspFI CCCAGC 1 cut(s) 83
PspGI CCWGG 3 cut(s) 72, 348, 695
PspN4I GGNNCC 2 cut(s) 694, 925
PspPI GGNCC 2 cut(s) 466, 950
PspPPI RGGWCCY 1 cut(s) 466
PspXI VCTCGAGB 1 cut(s) 890
PvuII CAGCTG 1 cut(s) 251
RsaI GTAC 4 cut(s) 522, 694, 901, 925
RsaNI GTAC 4 cut(s) 521, 693, 900, 924
RseI CAYNNNNRTG 2 cut(s) 643, 765
SalI GTCGAC 1 cut(s) 200
SaqAI TTAA 2 cut(s) 384, 546
SatI GCNGC 3 cut(s) 249, 742, 745
Sau3AI GATC 4 cut(s) 187, 225, 670, 774
Sau96I GGNCC 2 cut(s) 466, 950
SchI GAGTC 2 cut(s) 155, 676
ScrFI CCNGG 5 cut(s) 74, 350, 434, 659, 697
SduI GDGCHC 3 cut(s) 318, 786, 867
SfaNI GCATC 1 cut(s) 867
SfcI CTRYAG 1 cut(s) 1034
Sfr274I CTCGAG 1 cut(s) 890
SfuI TTCGAA 1 cut(s) 241
SinI GGWCC 1 cut(s) 466
SlaI CTCGAG 1 cut(s) 890
SmiMI CAYNNNNRTG 2 cut(s) 643, 765
SmlI CTYRAG 3 cut(s) 191, 608, 890
SmoI CTYRAG 3 cut(s) 191, 608, 890
SphI GCATGC 1 cut(s) 648
Sse9I AATT 8 cut(s) 32, 41, 288, 294, 416, 569, 906, 987
SseBI AGGCCT 1 cut(s) 72
SsiI CCGC 2 cut(s) 744, 1024
SspMI CTAG 2 cut(s) 470, 686
StuI AGGCCT 1 cut(s) 72
StyD4I CCNGG 5 cut(s) 72, 348, 432, 657, 695
StyI CCWWGG 1 cut(s) 357
TaaI ACNGT 2 cut(s) 17, 599
TaiI ACGT 1 cut(s) 783
TaqI TCGA 8 cut(s) 45, 201, 241, 328, 428, 632, 777, 891
TasI AATT 8 cut(s) 32, 41, 288, 294, 416, 569, 906, 987
TauI GCSGC 1 cut(s) 747
TfiI GAWTC 1 cut(s) 280
Tru1I TTAA 2 cut(s) 384, 546
Tru9I TTAA 2 cut(s) 384, 546
TscAI CASTG 2 cut(s) 604, 645
TseFI GTSAC 2 cut(s) 88, 636
TseI GCWGC 2 cut(s) 248, 741
Tsp45I GTSAC 2 cut(s) 88, 636
TspDTI ATGAA 6 cut(s) 63, 326, 492, 548, 749, 1034
TspRI CASTG 2 cut(s) 604, 645
VpaK11BI GGWCC 1 cut(s) 466
XapI RAATTY 1 cut(s) 288
XceI RCATGY 3 cut(s) 648, 826, 915
XcmI CCANNNNNNNNNTGG 1 cut(s) 944
XhoI CTCGAG 1 cut(s) 890
XmiI GTMKAC 2 cut(s) 78, 201
XmnI GAANNNNTTC 1 cut(s) 41
XspI CTAG 2 cut(s) 470, 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.