Rh6CG321800

Belongs to the iron ascorbate-dependent oxidoreductase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6C
OG0000837
Physical Location & Seq
Forward (+)
50811202 .. 50813028
1827 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6CG321800.1

Sequence Viewer

Length: 270 bp
ATGGAGGAGATGCTTCAAGGAATTTGTAGATTTCATGAGCAGCCTGCAGAAGACAAGATGGAGTTGTACTCTCGTGACTTCAAGAATCCGGTCAACTTTTATTGCAGTGGAGATCTGAAAGTGCGTACAAAATCAGCAGTAGACTGGAGAGACACCTTATTCTGCAGAGAAGTAGATGATGAATGGGATTTTGAAGCACTGCCTCAAGTCTGCAGAATTGGAACAAGAAGGAGATCGATCGAAAGAGGCGAATTGGAGCTCCGGTTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

89

Amino Acids

10.71

Weight (kDa)

5.02

Isoelectric Point (pI)

47.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 141
AcsI RAATTY 1 cut(s) 21
AfaI GTAC 2 cut(s) 68, 127
AgsI TTSAA 3 cut(s) 17, 82, 194
AluBI AGCT 1 cut(s) 259
AluI AGCT 1 cut(s) 259
Alw21I GWGCWC 1 cut(s) 261
Alw26I GTCTC 1 cut(s) 144
ApeKI GCWGC 1 cut(s) 40
ApoI RAATTY 1 cut(s) 21
BanII GRGCYC 1 cut(s) 261
BauI CACGAG 1 cut(s) 72
BbsI GAAGAC 1 cut(s) 57
Bbv12I GWGCWC 1 cut(s) 261
BbvI GCAGC 1 cut(s) 52
BccI CCATC 1 cut(s) 52
BcoDI GTCTC 1 cut(s) 144
BfmI CTRYAG 3 cut(s) 45, 163, 211
BglII AGATCT 1 cut(s) 112
BisI GCNGC 1 cut(s) 41
BlsI GCNGC 1 cut(s) 42
BpiI GAAGAC 1 cut(s) 57
BplI GAGNNNNNCTC 2 cut(s) 53, 85
BpmI CTGGAG 1 cut(s) 166
BpuEI CTTGAG 1 cut(s) 189
Bsa29I ATCGAT 1 cut(s) 236
BsaWI WCCGGW 2 cut(s) 88, 261
BsaXI ACNNNNNCTCC 1 cut(s) 248
Bse1I ACTGG 1 cut(s) 149
BseCI ATCGAT 1 cut(s) 236
BseNI ACTGG 1 cut(s) 149
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 1 cut(s) 52
Bsh1285I CGRYCG 1 cut(s) 240
BshVI ATCGAT 1 cut(s) 236
BsiEI CGRYCG 1 cut(s) 240
BsiHKAI GWGCWC 1 cut(s) 261
BsiSI CCGG 2 cut(s) 89, 262
BsmAI GTCTC 1 cut(s) 144
Bsp1286I GDGCHC 1 cut(s) 261
Bsp143I GATC 3 cut(s) 112, 233, 237
BspDI ATCGAT 1 cut(s) 236
BspHI TCATGA 1 cut(s) 34
BspMAI CTGCAG 3 cut(s) 49, 167, 215
BsrI ACTGG 1 cut(s) 149
BssMI GATC 3 cut(s) 112, 233, 237
BssSI CACGAG 1 cut(s) 72
Bst2BI CACGAG 1 cut(s) 72
BstC8I GCNNGC 1 cut(s) 45
BstKTI GATC 3 cut(s) 115, 236, 240
BstMAI GTCTC 1 cut(s) 144
BstMBI GATC 3 cut(s) 112, 233, 237
BstMCI CGRYCG 1 cut(s) 240
BstSFI CTRYAG 3 cut(s) 45, 163, 211
BstV1I GCAGC 1 cut(s) 52
BstV2I GAAGAC 1 cut(s) 57
BstX2I RGATCY 1 cut(s) 112
BstYI RGATCY 1 cut(s) 112
Bsu15I ATCGAT 1 cut(s) 236
BsuTUI ATCGAT 1 cut(s) 236
BtsI GCAGTG 2 cut(s) 112, 197
BtsIMutI CAGTG 2 cut(s) 112, 197
Cac8I GCNNGC 1 cut(s) 45
CciI TCATGA 1 cut(s) 34
ClaI ATCGAT 1 cut(s) 236
Csp6I GTAC 2 cut(s) 67, 126
CviAII CATG 1 cut(s) 35
CviJI RGCY 2 cut(s) 43, 259
CviKI_1 RGCY 2 cut(s) 43, 259
CviQI GTAC 2 cut(s) 67, 126
DpnI GATC 3 cut(s) 114, 235, 239
DpnII GATC 3 cut(s) 112, 233, 237
Ecl136II GAGCTC 1 cut(s) 259
Eco24I GRGCYC 1 cut(s) 261
Eco53kI GAGCTC 1 cut(s) 259
EcoICRI GAGCTC 1 cut(s) 259
EcoT38I GRGCYC 1 cut(s) 261
FaeI CATG 1 cut(s) 38
FaiI YATR 2 cut(s) 36, 268
FatI CATG 1 cut(s) 34
FblI GTMKAC 1 cut(s) 141
Fnu4HI GCNGC 1 cut(s) 41
FriOI GRGCYC 1 cut(s) 261
Fsp4HI GCNGC 1 cut(s) 41
GluI GCNGC 1 cut(s) 41
GsuI CTGGAG 1 cut(s) 166
HapII CCGG 2 cut(s) 89, 262
Hin1II CATG 1 cut(s) 38
HincII GTYRAC 1 cut(s) 94
HindII GTYRAC 1 cut(s) 94
HinfI GANTC 1 cut(s) 85
HpaII CCGG 2 cut(s) 89, 262
Hpy166II GTNNAC 2 cut(s) 94, 142
Hpy188I TCNGA 1 cut(s) 117
Hpy188III TCNNGA 3 cut(s) 35, 74, 82
Hpy8I GTNNAC 2 cut(s) 94, 142
HpyAV CCTTC 1 cut(s) 222
HpyCH4V TGCA 4 cut(s) 47, 105, 165, 213
Hsp92II CATG 1 cut(s) 38
Kzo9I GATC 3 cut(s) 112, 233, 237
LmnI GCTCC 2 cut(s) 256, 264
LpnPI CCDG 3 cut(s) 57, 102, 130
Lsp1109I GCAGC 1 cut(s) 52
MaeIII GTNAC 1 cut(s) 74
MalI GATC 3 cut(s) 114, 235, 239
MboI GATC 3 cut(s) 112, 233, 237
MboII GAAGA 1 cut(s) 62
MflI RGATCY 1 cut(s) 112
MhlI GDGCHC 1 cut(s) 261
MluCI AATT 3 cut(s) 21, 216, 251
MnlI CCTC 2 cut(s) 213, 239
MspI CCGG 2 cut(s) 89, 262
NdeII GATC 3 cut(s) 112, 233, 237
NlaIII CATG 1 cut(s) 38
NmuCI GTSAC 1 cut(s) 74
PagI TCATGA 1 cut(s) 34
PcsI WCGNNNNNNNCGW 1 cut(s) 246
PfeI GAWTC 1 cut(s) 85
PkrI GCNGC 1 cut(s) 42
Ple19I CGATCG 1 cut(s) 240
Psp124BI GAGCTC 1 cut(s) 261
PstI CTGCAG 3 cut(s) 49, 167, 215
PsuI RGATCY 1 cut(s) 112
PvuI CGATCG 1 cut(s) 240
RsaI GTAC 2 cut(s) 68, 127
RsaNI GTAC 2 cut(s) 67, 126
SacI GAGCTC 1 cut(s) 261
SatI GCNGC 1 cut(s) 41
Sau3AI GATC 3 cut(s) 112, 233, 237
SduI GDGCHC 1 cut(s) 261
SetI ASST 2 cut(s) 158, 261
SfcI CTRYAG 3 cut(s) 45, 163, 211
SmlI CTYRAG 1 cut(s) 204
SmoI CTYRAG 1 cut(s) 204
Sse9I AATT 3 cut(s) 21, 216, 251
SstI GAGCTC 1 cut(s) 261
TaqI TCGA 2 cut(s) 236, 240
TasI AATT 3 cut(s) 21, 216, 251
TatI WGTACW 1 cut(s) 66
TfiI GAWTC 1 cut(s) 85
TscAI CASTG 2 cut(s) 112, 204
TseFI GTSAC 1 cut(s) 74
TseI GCWGC 1 cut(s) 40
Tsp45I GTSAC 1 cut(s) 74
TspDTI ATGAA 2 cut(s) 23, 195
TspRI CASTG 2 cut(s) 112, 204
XapI RAATTY 1 cut(s) 21
XmiI GTMKAC 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.