RchiOBHm_Chr0c21g0500341

Belongs to the disease resistance NB-LRR family

Design Primers CRISPR Design

Basic Information

Type: Sequence Only
Biological Identity
rosa_chinensis
Unknown
OG0000865
Physical Location & Seq
Reverse (-)
0 .. 0
1 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2124 bp
ATGGAAGATCTCTTGCTTGCCATGTTAAACAATTTTGAGGCCACAACGCTAGATCTTCATCAAGAACAAGATCCAAGATCGAAATTGAGTCTACTGCTGCAGCACAAGAGGTTTCTGCTCGTCTTGGACAATGTTTGGAGTAAACAAGATTGGGAATTCTTTGTATGTTCTTTACCAAAAGGTTTGTGTGGGAGTAAGATAATCATTATTACTCGTAACTCTGACGTGGCTTCGTTTCCTGTAAAGTCCTCGGAGTATATCCATGATTTGAGTACTGGGTTGTCATTCAAAGAAGCCCATGACCTATTCTGTAAGAAGGCTTTTCAAGATGGGATTTGTCCCCCCGAGCTCGAGGAGTGCAGTAGAAAAATCCTGAACAAGTGTGAAGGCTCACCCTTTGCAATTTCAACTGTCGGTACTGTGCTAGCAACAAAGCCACAAACGAAAAATGAGTGGGAGGAGTTACATGACACCCTCACATCAAACTTTACAGCTGACCCAAAGCTTTTGGTCCTTAGCCGTATTTTTCAGCCTTGTTACAGAGATCTTCAAAGCCATCTCAAAAGTTGCTTCTTGTACCTCGGCATATTTCCTGAAGACTACTACATCCGGCGAGGGAGGCTTTTTCGTTTGTGGGTTGCTGAAGGATTTGTGGAGCCGACAGCAGGACTAACAGTAGAGGAGGTTGCAGAACAATATCTGAACGAGCTCATTGACAGCAATTTGGTCCAAGCCAGCTCCTGGGGAATTGATGGACGAGTGAAGAGTTGTCGTATTTCTAACATTGTTCGTGCGTTCATCATGTCACAGAAGTTTGTCACTGATTCCGAAACAATCTGGTGCAGACAAACAGAAGTTGACAAAGTTCGACGCCTCTCTGCTCCTAATCTGATTATCAAATATCTGTCAAACTCTGGAATTGACTTGAATGGTATTCGTACATTACAGAGTTACAAGAAGGGAAGTTCTGGACTTGACTTGAATGTTATTCGTACCTTACAAGGTCACAAGAAGGAAAATTCTGATTCTCAGTTTGCCATGGTACTTAAAACCACTAGATTTTTAAGGGTATTAGATTTGCAAGGTGTACCTTTGGAAAAATTTCCTTCTAGTGTTGTTGGCCTCACCCTCTTAAAGTATCTAAGTCTAAGGAAATCCCAGATCAAAACAGTTCCCCAGTCCATAGAAAAGTTGTTATTCTTAGAAACCTTGGATCTTAAATACACCCGGGTGACCCATTTGCCAGAAGAGATTTGTAAACTTGTAAGGTTGCGCCATCTATTAGTATGCAATAATCCCGGTAGTGGAGGAGTGACTCTTTCTGCAGGCAATCTTGGAGCCCTATCTTCCATACAAAATTTGTCATTAGTTAAGGTGGAAAACGACAGAAGAATCCTAAAAGCCTTGGGAAAGCTAATAGGTCTCAGAAAGTTGGGGCTGACAGATGTGAGAAAAGAAGATGGAGTAGAATTGTGTTGTTCTCTTCAGAAAATGGAGAATCTTTCATCATTTGATGTAGCATCAACAAGCAAGGATGAGTATCTTGATTTGGATCACATGCAATCTCCTCTAGTGGCTCCTCTCTATCTTGAACGTTTATTTTTGATAGGAAGGCTAGAAAGGGTACCTAAGTGGATTCCTGAGCTTACGAGTCTAACAAAGATTCTTTTAAAGTGGTCAAGAGTGAAACCTCATGTCAACTCACTTGAGGCCCTCGAATCTTTGCCAAATCTGATGGAGCTCACTTTGGTTCAGTTTTACACAGGGAAGAAGTTGGTATTCAAAGCTCAAACGTTCAAGAAACTAATGATATTAAGAATAGAAGAATTCGATGAGCTAAATTTGATGAAAGTTGAGAGTCAGGCAATGCCTATGCTTAAGAAGCTAATCATATCTAGATGTCAGGGTTTGGACTCACTTCCATGGGGCATTACTGGTCTTATCCAGCTTGAAGAATTGATTGAATCTGATATGCCTGATAAATTCATCGCTAATCTTCAAAAGCATAGTGCAGCCCTTGAGATGATGCAGATTCGAGTCATCCATTCTTCCAAAACAGGGAGCAACCAATCTTCGACTAGATTTCAAGATTTCTCTCCCTCCAATTGGCATTTGGAATCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04626 map04626
Pfam Domains
Protein Families
NB-ARC

Protein Analysis

707

Amino Acids

80.33

Weight (kDa)

8.54

Isoelectric Point (pI)

43.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NB-ARC PF00931 2 - 110 8.8e-16 NB-ARC domain
WHD_DRP PF23559 196 - 265 3.2e-18 Disease resistance protein Winged helix domain
LRR_14 PF23598 346 - 632 4.2e-40 Leucine-rich repeat region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1624
AccB1I GGYRCC 1 cut(s) 1624
AccB7I CCANNNNNTGG 1 cut(s) 741
AccI GTMKAC 1 cut(s) 91
AclI AACGTT 2 cut(s) 1594, 1793
AclWI GGATC 3 cut(s) 65, 1221, 1560
AcsI RAATTY 7 cut(s) 155, 1018, 1100, 1357, 1826, 1840, 1982
AcuI CTGAAG 3 cut(s) 615, 663, 1469
AcyI GRCGYC 1 cut(s) 871
AfaI GTAC 8 cut(s) 274, 418, 578, 940, 994, 1044, 1089, 1626
AfiI CCNNNNNNNGG 5 cut(s) 665, 741, 1304, 2058, 2106
AflII CTTAAG 1 cut(s) 1877
AjiI CACGTC 1 cut(s) 226
AjnI CCWGG 1 cut(s) 740
AleI CACNNNNGTG 1 cut(s) 1229
Alw21I GWGCWC 3 cut(s) 351, 711, 1743
Alw26I GTCTC 1 cut(s) 1427
AlwI GGATC 3 cut(s) 65, 1221, 1560
AlwNI CAGNNNCTG 1 cut(s) 741
Ama87I CYCGRG 3 cut(s) 344, 350, 1227
AoxI GGCC 3 cut(s) 39, 1120, 1710
ApeKI GCWGC 3 cut(s) 97, 100, 2012
ApoI RAATTY 7 cut(s) 155, 1018, 1100, 1357, 1826, 1840, 1982
Asp700I GAANNNNTTC 1 cut(s) 1101
Asp718I GGTACC 1 cut(s) 1624
AspLEI GCGC 1 cut(s) 1275
AspS9I GGNCC 3 cut(s) 511, 727, 1711
AsuC2I CCSGG 3 cut(s) 1228, 1229, 1299
AsuHPI GGTGA 3 cut(s) 384, 1117, 1243
AsuNHI GCTAGC 1 cut(s) 424
AvaI CYCGRG 3 cut(s) 344, 350, 1227
AvaII GGWCC 2 cut(s) 511, 727
BaeI ACNNNNGTAYC 2 cut(s) 1616, 1649
BanI GGYRCC 1 cut(s) 1624
BanII GRGCYC 4 cut(s) 351, 711, 1342, 1743
BbsI GAAGAC 1 cut(s) 603
Bbv12I GWGCWC 3 cut(s) 351, 711, 1743
BbvI GCAGC 3 cut(s) 84, 112, 2024
BccI CCATC 6 cut(s) 323, 564, 746, 1284, 1454, 1729
BceAI ACGGC 1 cut(s) 504
BciT130I CCWGG 1 cut(s) 742
BcnI CCSGG 3 cut(s) 1228, 1229, 1299
BcoDI GTCTC 1 cut(s) 1427
BfaI CTAG 8 cut(s) 50, 425, 1056, 1110, 1571, 1616, 1896, 2079
BfmI CTRYAG 2 cut(s) 98, 1323
BfrI CTTAAG 1 cut(s) 1877
BglII AGATCT 3 cut(s) 7, 52, 544
BisI GCNGC 3 cut(s) 98, 101, 2013
BlsI GCNGC 3 cut(s) 99, 102, 2014
BmcAI AGTACT 1 cut(s) 274
Bme1390I CCNGG 4 cut(s) 742, 1228, 1229, 1299
Bme18I GGWCC 2 cut(s) 511, 727
BmeT110I CYCGRG 3 cut(s) 344, 350, 1227
BmgBI CACGTC 1 cut(s) 226
BmgT120I GGNCC 3 cut(s) 511, 727, 1711
BmiI GGNNCC 4 cut(s) 657, 1339, 1578, 1626
BmrFI CCNGG 4 cut(s) 742, 1228, 1229, 1299
BmrI ACTGGG 2 cut(s) 285, 1171
BmsI GCATC 2 cut(s) 1529, 2016
BmtI GCTAGC 1 cut(s) 428
BmuI ACTGGG 2 cut(s) 285, 1171
BpiI GAAGAC 1 cut(s) 603
Bpu10I CCTNAGC 2 cut(s) 515, 1641
BpuEI CTTGAG 2 cut(s) 1727, 2039
BpuMI CCSGG 3 cut(s) 1228, 1229, 1299
BsaBI GATNNNNATC 3 cut(s) 57, 1539, 1551
BsaHI GRCGYC 1 cut(s) 871
BsaI GGTCTC 1 cut(s) 1427
BsaJI CCNNGG 8 cut(s) 249, 580, 741, 1038, 1209, 1227, 1404, 1922
Bsc4I CCNNNNNNNGG 5 cut(s) 665, 741, 1304, 2058, 2106
Bse1I ACTGG 3 cut(s) 280, 1177, 1939
Bse3DI GCAATG 1 cut(s) 1872
Bse8I GATNNNNATC 3 cut(s) 57, 1539, 1551
BseBI CCWGG 1 cut(s) 742
BseDI CCNNGG 8 cut(s) 249, 580, 741, 1038, 1209, 1227, 1404, 1922
BseGI GGATG 3 cut(s) 606, 1540, 2040
BseJI GATNNNNATC 3 cut(s) 57, 1539, 1551
BseLI CCNNNNNNNGG 5 cut(s) 665, 741, 1304, 2058, 2106
BseMI GCAATG 1 cut(s) 1872
BseMII CTCAG 3 cut(s) 1043, 1438, 1632
BseNI ACTGG 3 cut(s) 280, 1177, 1939
BseRI GAGGAG 6 cut(s) 368, 473, 695, 1323, 1557, 1569
BseXI GCAGC 3 cut(s) 84, 112, 2024
BsgI GTGCAG 3 cut(s) 379, 862, 2031
BshFI GGCC 3 cut(s) 41, 1122, 1712
BshNI GGYRCC 1 cut(s) 1624
BsiHKAI GWGCWC 3 cut(s) 351, 711, 1743
BsiHKCI CYCGRG 3 cut(s) 344, 350, 1227
BsiSI CCGG 3 cut(s) 610, 1228, 1299
BslFI GGGAC 1 cut(s) 324
BslI CCNNNNNNNGG 5 cut(s) 665, 741, 1304, 2058, 2106
BsmAI GTCTC 1 cut(s) 1427
BsmFI GGGAC 1 cut(s) 324
BsnI GGCC 3 cut(s) 41, 1122, 1712
Bso31I GGTCTC 1 cut(s) 1427
BsoBI CYCGRG 3 cut(s) 344, 350, 1227
Bsp1286I GDGCHC 4 cut(s) 351, 711, 1342, 1743
Bsp143I GATC 8 cut(s) 7, 52, 70, 77, 544, 1161, 1213, 1552
Bsp19I CCATGG 2 cut(s) 1038, 1922
BspANI GGCC 3 cut(s) 41, 1122, 1712
BspCNI CTCAG 3 cut(s) 1042, 1437, 1633
BspLI GGNNCC 4 cut(s) 657, 1339, 1578, 1626
BspMAI CTGCAG 2 cut(s) 102, 1327
BspOI GCTAGC 1 cut(s) 428
BspPI GGATC 3 cut(s) 65, 1221, 1560
BspT107I GGYRCC 1 cut(s) 1624
BspTI CTTAAG 1 cut(s) 1877
BspTNI GGTCTC 1 cut(s) 1427
BsrDI GCAATG 1 cut(s) 1872
BsrI ACTGG 3 cut(s) 280, 1177, 1939
BssECI CCNNGG 8 cut(s) 249, 580, 741, 1038, 1209, 1227, 1404, 1922
BssMI GATC 8 cut(s) 7, 52, 70, 77, 544, 1161, 1213, 1552
BssNI GRCGYC 1 cut(s) 871
BssT1I CCWWGG 4 cut(s) 1038, 1209, 1404, 1922
Bst2UI CCWGG 1 cut(s) 742
Bst4CI ACNGT 4 cut(s) 412, 421, 676, 1171
Bst6I CTCTTC 3 cut(s) 758, 1242, 1488
BstACI GRCGYC 1 cut(s) 871
BstAFI CTTAAG 1 cut(s) 1877
BstC8I GCNNGC 4 cut(s) 18, 426, 736, 1327
BstDEI CTNAG 8 cut(s) 515, 1029, 1142, 1148, 1201, 1424, 1629, 1641
BstDSI CCRYGG 2 cut(s) 1038, 1922
BstEII GGTNACC 1 cut(s) 1231
BstF5I GGATG 3 cut(s) 606, 1540, 2040
BstHHI GCGC 1 cut(s) 1275
BstKTI GATC 8 cut(s) 10, 55, 73, 80, 547, 1164, 1216, 1555
BstMAI GTCTC 1 cut(s) 1427
BstMBI GATC 8 cut(s) 7, 52, 70, 77, 544, 1161, 1213, 1552
BstMWI GCNNNNNNNGC 2 cut(s) 619, 1882
BstNI CCWGG 1 cut(s) 742
BstNSI RCATGY 1 cut(s) 1561
BstPI GGTNACC 1 cut(s) 1231
BstSCI CCNGG 4 cut(s) 740, 1226, 1227, 1297
BstSFI CTRYAG 2 cut(s) 98, 1323
BstV1I GCAGC 3 cut(s) 84, 112, 2024
BstV2I GAAGAC 1 cut(s) 603
BstX2I RGATCY 5 cut(s) 7, 52, 70, 544, 1213
BstYI RGATCY 5 cut(s) 7, 52, 70, 544, 1213
BsuRI GGCC 3 cut(s) 41, 1122, 1712
BtgI CCRYGG 2 cut(s) 1038, 1922
BtgZI GCGATG 1 cut(s) 1972
BtrI CACGTC 1 cut(s) 226
BtsCI GGATG 3 cut(s) 606, 1540, 2040
BtsIMutI CAGTG 1 cut(s) 819
Cac8I GCNNGC 4 cut(s) 18, 426, 736, 1327
CaiI CAGNNNCTG 1 cut(s) 741
CfoI GCGC 1 cut(s) 1275
Cfr13I GGNCC 3 cut(s) 511, 727, 1711
Cfr9I CCCGGG 1 cut(s) 1227
CseI GACGC 1 cut(s) 879
Csp6I GTAC 8 cut(s) 273, 417, 577, 939, 993, 1043, 1088, 1625
CviAII CATG 9 cut(s) 22, 263, 299, 467, 802, 1039, 1558, 1694, 1923
CviQI GTAC 8 cut(s) 273, 417, 577, 939, 993, 1043, 1088, 1625
DdeI CTNAG 8 cut(s) 515, 1029, 1142, 1148, 1201, 1424, 1629, 1641
DpnI GATC 8 cut(s) 9, 54, 72, 79, 546, 1163, 1215, 1554
DpnII GATC 8 cut(s) 7, 52, 70, 77, 544, 1161, 1213, 1552
DraI TTTAAA 1 cut(s) 1671
Eam1104I CTCTTC 3 cut(s) 758, 1242, 1488
EarI CTCTTC 3 cut(s) 758, 1242, 1488
Ecl136II GAGCTC 3 cut(s) 349, 709, 1741
Eco130I CCWWGG 4 cut(s) 1038, 1209, 1404, 1922
Eco24I GRGCYC 4 cut(s) 351, 711, 1342, 1743
Eco31I GGTCTC 1 cut(s) 1427
Eco47I GGWCC 2 cut(s) 511, 727
Eco53kI GAGCTC 3 cut(s) 349, 709, 1741
Eco57I CTGAAG 3 cut(s) 615, 663, 1469
Eco88I CYCGRG 3 cut(s) 344, 350, 1227
Eco91I GGTNACC 1 cut(s) 1231
EcoICRI GAGCTC 3 cut(s) 349, 709, 1741
EcoO109I RGGNCCY 1 cut(s) 1711
EcoO65I GGTNACC 1 cut(s) 1231
EcoRI GAATTC 2 cut(s) 155, 1826
EcoRII CCWGG 1 cut(s) 740
EcoT14I CCWWGG 4 cut(s) 1038, 1209, 1404, 1922
EcoT38I GRGCYC 4 cut(s) 351, 711, 1342, 1743
ErhI CCWWGG 4 cut(s) 1038, 1209, 1404, 1922
FaeI CATG 9 cut(s) 25, 266, 302, 470, 805, 1042, 1561, 1697, 1926
FaqI GGGAC 1 cut(s) 324
FatI CATG 9 cut(s) 21, 262, 298, 466, 801, 1038, 1557, 1693, 1922
FblI GTMKAC 1 cut(s) 91
Fnu4HI GCNGC 3 cut(s) 98, 101, 2013
FokI GGATG 3 cut(s) 593, 1547, 2027
FriOI GRGCYC 4 cut(s) 351, 711, 1342, 1743
Fsp4HI GCNGC 3 cut(s) 98, 101, 2013
FspBI CTAG 8 cut(s) 50, 425, 1056, 1110, 1571, 1616, 1896, 2079
GlaI GCGC 1 cut(s) 1274
GluI GCNGC 3 cut(s) 98, 101, 2013
HaeIII GGCC 3 cut(s) 41, 1122, 1712
HapII CCGG 3 cut(s) 610, 1228, 1299
HgaI GACGC 1 cut(s) 879
HhaI GCGC 1 cut(s) 1275
Hin1I GRCGYC 1 cut(s) 871
Hin1II CATG 9 cut(s) 25, 266, 302, 470, 805, 1042, 1561, 1697, 1926
Hin6I GCGC 1 cut(s) 1273
HinP1I GCGC 1 cut(s) 1273
HincII GTYRAC 2 cut(s) 859, 1699
HindII GTYRAC 2 cut(s) 859, 1699
HindIII AAGCTT 1 cut(s) 503
HpaII CCGG 3 cut(s) 610, 1228, 1299
HphI GGTGA 3 cut(s) 384, 1117, 1243
Hpy166II GTNNAC 6 cut(s) 92, 143, 859, 1088, 1259, 1699
Hpy8I GTNNAC 6 cut(s) 92, 143, 859, 1088, 1259, 1699
Hpy99I CGWCG 1 cut(s) 873
HpyAV CCTTC 7 cut(s) 310, 380, 638, 952, 1006, 1116, 1605
HpyCH4III ACNGT 4 cut(s) 412, 421, 676, 1171
HpyCH4IV ACGT 3 cut(s) 225, 1594, 1793
HpyF10VI GCNNNNNNNGC 2 cut(s) 619, 1882
HpyF3I CTNAG 8 cut(s) 515, 1029, 1142, 1148, 1201, 1424, 1629, 1641
HpySE526I ACGT 3 cut(s) 225, 1594, 1793
Hsp92I GRCGYC 1 cut(s) 871
Hsp92II CATG 9 cut(s) 25, 266, 302, 470, 805, 1042, 1561, 1697, 1926
HspAI GCGC 1 cut(s) 1273
KpnI GGTACC 1 cut(s) 1628
Kzo9I GATC 8 cut(s) 7, 52, 70, 77, 544, 1161, 1213, 1552
LmnI GCTCC 7 cut(s) 655, 743, 886, 1337, 1582, 1738, 2061
Lsp1109I GCAGC 3 cut(s) 84, 112, 2024
LweI GCATC 2 cut(s) 1529, 2016
MaeI CTAG 8 cut(s) 50, 425, 1056, 1110, 1571, 1616, 1896, 2079
MaeII ACGT 3 cut(s) 225, 1594, 1793
MaeIII GTNAC 9 cut(s) 215, 462, 536, 804, 817, 950, 1004, 1231, 1312
MalI GATC 8 cut(s) 9, 54, 72, 79, 546, 1163, 1215, 1554
MboI GATC 8 cut(s) 7, 52, 70, 77, 544, 1161, 1213, 1552
MfeI CAATTG 1 cut(s) 2104
MflI RGATCY 5 cut(s) 7, 52, 70, 544, 1213
MhlI GDGCHC 4 cut(s) 351, 711, 1342, 1743
MlyI GAGTC 6 cut(s) 97, 1309, 1660, 1867, 1907, 2046
MroXI GAANNNNTTC 1 cut(s) 1101
MseI TTAA 9 cut(s) 26, 1047, 1064, 1133, 1218, 1371, 1670, 1814, 1878
MslI CAYNNNNRTG 2 cut(s) 1229, 1921
MspA1I CMGCKG 1 cut(s) 494
MspCI CTTAAG 1 cut(s) 1877
MspI CCGG 3 cut(s) 610, 1228, 1299
MspR9I CCNGG 4 cut(s) 742, 1228, 1229, 1299
MunI CAATTG 1 cut(s) 2104
MvaI CCWGG 1 cut(s) 742
MwoI GCNNNNNNNGC 2 cut(s) 619, 1882
NciI CCSGG 3 cut(s) 1228, 1229, 1299
NcoI CCATGG 2 cut(s) 1038, 1922
NdeII GATC 8 cut(s) 7, 52, 70, 77, 544, 1161, 1213, 1552
NheI GCTAGC 1 cut(s) 424
NlaIII CATG 9 cut(s) 25, 266, 302, 470, 805, 1042, 1561, 1697, 1926
NlaIV GGNNCC 4 cut(s) 657, 1339, 1578, 1626
NmeAIII GCCGAG 1 cut(s) 561
NmuCI GTSAC 5 cut(s) 804, 817, 1004, 1231, 1312
NspI RCATGY 1 cut(s) 1561
OliI CACNNNNGTG 1 cut(s) 1229
PaeR7I CTCGAG 1 cut(s) 350
PdmI GAANNNNTTC 1 cut(s) 1101
PflMI CCANNNNNTGG 1 cut(s) 741
PkrI GCNGC 3 cut(s) 99, 102, 2014
PleI GAGTC 6 cut(s) 96, 1309, 1659, 1866, 1907, 2045
PpsI GAGTC 6 cut(s) 96, 1309, 1659, 1866, 1907, 2045
Psp124BI GAGCTC 3 cut(s) 351, 711, 1743
Psp1406I AACGTT 2 cut(s) 1594, 1793
Psp6I CCWGG 1 cut(s) 740
PspEI GGTNACC 1 cut(s) 1231
PspGI CCWGG 1 cut(s) 740
PspN4I GGNNCC 4 cut(s) 657, 1339, 1578, 1626
PspPI GGNCC 3 cut(s) 511, 727, 1711
PspXI VCTCGAGB 1 cut(s) 350
PstI CTGCAG 2 cut(s) 102, 1327
PstNI CAGNNNCTG 1 cut(s) 741
PsuI RGATCY 5 cut(s) 7, 52, 70, 544, 1213
PvuII CAGCTG 1 cut(s) 494
RsaI GTAC 8 cut(s) 274, 418, 578, 940, 994, 1044, 1089, 1626
RsaNI GTAC 8 cut(s) 273, 417, 577, 939, 993, 1043, 1088, 1625
RseI CAYNNNNRTG 2 cut(s) 1229, 1921
SacI GAGCTC 3 cut(s) 351, 711, 1743
SaqAI TTAA 9 cut(s) 26, 1047, 1064, 1133, 1218, 1371, 1670, 1814, 1878
SatI GCNGC 3 cut(s) 98, 101, 2013
Sau3AI GATC 8 cut(s) 7, 52, 70, 77, 544, 1161, 1213, 1552
Sau96I GGNCC 3 cut(s) 511, 727, 1711
ScaI AGTACT 1 cut(s) 274
SchI GAGTC 6 cut(s) 97, 1309, 1660, 1867, 1907, 2046
ScrFI CCNGG 4 cut(s) 742, 1228, 1229, 1299
SduI GDGCHC 4 cut(s) 351, 711, 1342, 1743
SfaNI GCATC 2 cut(s) 1529, 2016
SfcI CTRYAG 2 cut(s) 98, 1323
Sfr274I CTCGAG 1 cut(s) 350
SinI GGWCC 2 cut(s) 511, 727
SlaI CTCGAG 1 cut(s) 350
SmaI CCCGGG 1 cut(s) 1229
SmiMI CAYNNNNRTG 2 cut(s) 1229, 1921
SmlI CTYRAG 4 cut(s) 350, 1706, 1877, 2018
SmoI CTYRAG 4 cut(s) 350, 1706, 1877, 2018
SspMI CTAG 8 cut(s) 50, 425, 1056, 1110, 1571, 1616, 1896, 2079
SstI GAGCTC 3 cut(s) 351, 711, 1743
StyD4I CCNGG 4 cut(s) 740, 1226, 1227, 1297
StyI CCWWGG 4 cut(s) 1038, 1209, 1404, 1922
TaaI ACNGT 4 cut(s) 412, 421, 676, 1171
TaiI ACGT 3 cut(s) 228, 1597, 1796
TaqI TCGA 7 cut(s) 80, 351, 868, 1716, 1830, 2035, 2075
TatI WGTACW 1 cut(s) 272
Tru1I TTAA 9 cut(s) 26, 1047, 1064, 1133, 1218, 1371, 1670, 1814, 1878
Tru9I TTAA 9 cut(s) 26, 1047, 1064, 1133, 1218, 1371, 1670, 1814, 1878
TscAI CASTG 1 cut(s) 826
TseFI GTSAC 5 cut(s) 804, 817, 1004, 1231, 1312
TseI GCWGC 3 cut(s) 97, 100, 2012
Tsp45I GTSAC 5 cut(s) 804, 817, 1004, 1231, 1312
TspDTI ATGAA 5 cut(s) 47, 787, 1494, 1862, 1975
TspMI CCCGGG 1 cut(s) 1227
TspRI CASTG 1 cut(s) 826
Van91I CCANNNNNTGG 1 cut(s) 741
Vha464I CTTAAG 1 cut(s) 1877
VpaK11BI GGWCC 2 cut(s) 511, 727
XapI RAATTY 7 cut(s) 155, 1018, 1100, 1357, 1826, 1840, 1982
XbaI TCTAGA 1 cut(s) 1895
XceI RCATGY 1 cut(s) 1561
XcmI CCANNNNNNNNNTGG 1 cut(s) 2110
XhoI CTCGAG 1 cut(s) 350
XmaI CCCGGG 1 cut(s) 1227
XmiI GTMKAC 1 cut(s) 91
XmnI GAANNNNTTC 1 cut(s) 1101
XspI CTAG 8 cut(s) 50, 425, 1056, 1110, 1571, 1616, 1896, 2079
ZrmI AGTACT 1 cut(s) 274
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.