RNA helicase SDE3
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 1085, 2781 |
| Acc65I | GGTACC | 1 cut(s) | 3475 |
| AccB1I | GGYRCC | 1 cut(s) | 3475 |
| AccBSI | CCGCTC | 1 cut(s) | 3495 |
| AccI | GTMKAC | 2 cut(s) | 1020, 3324 |
| AccII | CGCG | 1 cut(s) | 3756 |
| AccIII | TCCGGA | 3 cut(s) | 1693, 3244, 3546 |
| AciI | CCGC | 7 cut(s) | 702, 725, 847, 1487, 2023, 2550, 3493 |
| AclI | AACGTT | 1 cut(s) | 3184 |
| AclWI | GGATC | 5 cut(s) | 35, 147, 209, 775, 1370 |
| AcoI | YGGCCR | 1 cut(s) | 2846 |
| AcsI | RAATTY | 3 cut(s) | 2166, 2775, 2960 |
| AcuI | CTGAAG | 5 cut(s) | 50, 245, 744, 2724, 3279 |
| AcyI | GRCGYC | 2 cut(s) | 1150, 1875 |
| AfaI | GTAC | 6 cut(s) | 723, 1528, 2899, 3157, 3255, 3477 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 846, 1217, 2217, 2743, 2844, 2915, 3748 |
| AflII | CTTAAG | 3 cut(s) | 586, 802, 3205 |
| AflIII | ACRYGT | 3 cut(s) | 641, 832, 1704 |
| AhlI | ACTAGT | 1 cut(s) | 3707 |
| AjiI | CACGTC | 1 cut(s) | 2140 |
| AjnI | CCWGG | 1 cut(s) | 2159 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2398, 2430, 3440, 3472 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1563, 1595 |
| Alw21I | GWGCWC | 4 cut(s) | 1351, 1976, 3049, 3125 |
| Alw26I | GTCTC | 6 cut(s) | 363, 972, 1141, 1931, 2313, 2664 |
| AlwI | GGATC | 5 cut(s) | 35, 147, 209, 775, 1370 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1142, 3387 |
| Ama87I | CYCGRG | 1 cut(s) | 451 |
| Aor13HI | TCCGGA | 3 cut(s) | 1693, 3244, 3546 |
| AoxI | GGCC | 6 cut(s) | 341, 1483, 1507, 2846, 3075, 3818 |
| ApoI | RAATTY | 3 cut(s) | 2166, 2775, 2960 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2858, 2890 |
| Asp718I | GGTACC | 1 cut(s) | 3475 |
| AspLEI | GCGC | 3 cut(s) | 2604, 3373, 3758 |
| AspS9I | GGNCC | 6 cut(s) | 1484, 1507, 1515, 3242, 3819, 3859 |
| AsuII | TTCGAA | 1 cut(s) | 3589 |
| AvaI | CYCGRG | 1 cut(s) | 451 |
| AvaII | GGWCC | 3 cut(s) | 1515, 3242, 3859 |
| AxyI | CCTNAGG | 1 cut(s) | 3480 |
| BaeGI | GKGCMC | 3 cut(s) | 945, 1642, 2637 |
| BanI | GGYRCC | 1 cut(s) | 3475 |
| BanII | GRGCYC | 4 cut(s) | 1351, 2910, 3049, 3221 |
| BbsI | GAAGAC | 2 cut(s) | 644, 2187 |
| Bbv12I | GWGCWC | 4 cut(s) | 1351, 1976, 3049, 3125 |
| BbvCI | CCTCAGC | 4 cut(s) | 604, 1011, 2349, 2355 |
| BceAI | ACGGC | 3 cut(s) | 1795, 1992, 2861 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1173, 1207 |
| BciT130I | CCWGG | 1 cut(s) | 2161 |
| BclI | TGATCA | 2 cut(s) | 657, 1771 |
| BcoDI | GTCTC | 6 cut(s) | 363, 972, 1141, 1931, 2313, 2664 |
| BcuI | ACTAGT | 1 cut(s) | 3707 |
| BfmI | CTRYAG | 3 cut(s) | 1356, 1455, 3189 |
| BfoI | RGCGCY | 1 cut(s) | 2605 |
| BfrI | CTTAAG | 3 cut(s) | 586, 802, 3205 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 2813 |
| BglII | AGATCT | 1 cut(s) | 2146 |
| BlpI | GCTNAGC | 1 cut(s) | 2904 |
| BmcAI | AGTACT | 1 cut(s) | 2899 |
| Bme1390I | CCNGG | 1 cut(s) | 2161 |
| Bme18I | GGWCC | 3 cut(s) | 1515, 3242, 3859 |
| BmeT110I | CYCGRG | 1 cut(s) | 451 |
| BmgBI | CACGTC | 1 cut(s) | 2140 |
| BmgT120I | GGNCC | 6 cut(s) | 1484, 1507, 1515, 3242, 3819, 3859 |
| BmiI | GGNNCC | 4 cut(s) | 62, 387, 903, 3477 |
| BmrFI | CCNGG | 1 cut(s) | 2161 |
| BmsI | GCATC | 7 cut(s) | 1297, 1379, 1903, 2055, 2959, 3077, 3634 |
| BpiI | GAAGAC | 2 cut(s) | 644, 2187 |
| BpmI | CTGGAG | 5 cut(s) | 564, 1599, 1799, 2433, 3321 |
| Bpu10I | CCTNAGC | 7 cut(s) | 366, 570, 604, 786, 1011, 2349, 2355 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2904 |
| Bpu14I | TTCGAA | 1 cut(s) | 3589 |
| BpuEI | CTTGAG | 1 cut(s) | 3767 |
| BsaBI | GATNNNNATC | 1 cut(s) | 3177 |
| BsaHI | GRCGYC | 2 cut(s) | 1150, 1875 |
| BsaI | GGTCTC | 1 cut(s) | 2313 |
| BsaJI | CCNNGG | 1 cut(s) | 381 |
| BsaWI | WCCGGW | 3 cut(s) | 1693, 3244, 3546 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 1563, 1593, 2455, 2485, 3294, 3324 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 846, 1217, 2217, 2743, 2844, 2915, 3748 |
| Bse1I | ACTGG | 5 cut(s) | 114, 2885, 3244, 3304, 3727 |
| Bse21I | CCTNAGG | 1 cut(s) | 3480 |
| Bse3DI | GCAATG | 2 cut(s) | 1592, 3762 |
| Bse8I | GATNNNNATC | 1 cut(s) | 3177 |
| BseAI | TCCGGA | 3 cut(s) | 1693, 3244, 3546 |
| BseBI | CCWGG | 1 cut(s) | 2161 |
| BseDI | CCNNGG | 1 cut(s) | 381 |
| BseJI | GATNNNNATC | 1 cut(s) | 3177 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 846, 1217, 2217, 2743, 2844, 2915, 3748 |
| BseMI | GCAATG | 2 cut(s) | 1592, 3762 |
| BseNI | ACTGG | 5 cut(s) | 114, 2885, 3244, 3304, 3727 |
| BseRI | GAGGAG | 3 cut(s) | 54, 808, 1751 |
| BseSI | GKGCMC | 3 cut(s) | 945, 1642, 2637 |
| BseYI | CCCAGC | 2 cut(s) | 2497, 3747 |
| BsgI | GTGCAG | 2 cut(s) | 2016, 3117 |
| Bsh1236I | CGCG | 1 cut(s) | 3756 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2036 |
| BshFI | GGCC | 6 cut(s) | 343, 1485, 1509, 2848, 3077, 3820 |
| BshNI | GGYRCC | 1 cut(s) | 3475 |
| BsiEI | CGRYCG | 1 cut(s) | 2036 |
| BsiHKAI | GWGCWC | 4 cut(s) | 1351, 1976, 3049, 3125 |
| BsiHKCI | CYCGRG | 1 cut(s) | 451 |
| BsiSI | CCGG | 4 cut(s) | 1694, 3245, 3547, 3665 |
| BslFI | GGGAC | 3 cut(s) | 550, 2879, 3792 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 846, 1217, 2217, 2743, 2844, 2915, 3748 |
| BsmAI | GTCTC | 6 cut(s) | 363, 972, 1141, 1931, 2313, 2664 |
| BsmBI | CGTCTC | 2 cut(s) | 363, 1141 |
| BsmFI | GGGAC | 3 cut(s) | 550, 2879, 3792 |
| BsmI | GAATGC | 6 cut(s) | 320, 748, 1221, 2124, 3357, 3455 |
| BsnI | GGCC | 6 cut(s) | 343, 1485, 1509, 2848, 3077, 3820 |
| Bso31I | GGTCTC | 1 cut(s) | 2313 |
| BsoBI | CYCGRG | 1 cut(s) | 451 |
| Bsp119I | TTCGAA | 1 cut(s) | 3589 |
| Bsp1286I | GDGCHC | 9 cut(s) | 945, 1351, 1642, 1976, 2637, 2910, 3049, 3125, 3221 |
| Bsp13I | TCCGGA | 3 cut(s) | 1693, 3244, 3546 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2904 |
| BspACI | CCGC | 7 cut(s) | 702, 725, 847, 1487, 2023, 2550, 3493 |
| BspANI | GGCC | 6 cut(s) | 343, 1485, 1509, 2848, 3077, 3820 |
| BspEI | TCCGGA | 3 cut(s) | 1693, 3244, 3546 |
| BspFNI | CGCG | 1 cut(s) | 3756 |
| BspHI | TCATGA | 2 cut(s) | 1774, 3576 |
| BspLI | GGNNCC | 4 cut(s) | 62, 387, 903, 3477 |
| BspMAI | CTGCAG | 3 cut(s) | 1360, 1459, 3193 |
| BspPI | GGATC | 5 cut(s) | 35, 147, 209, 775, 1370 |
| BspQI | GCTCTTC | 1 cut(s) | 1235 |
| BspT104I | TTCGAA | 1 cut(s) | 3589 |
| BspT107I | GGYRCC | 1 cut(s) | 3475 |
| BspTI | CTTAAG | 3 cut(s) | 586, 802, 3205 |
| BspTNI | GGTCTC | 1 cut(s) | 2313 |
| BsrBI | CCGCTC | 1 cut(s) | 3495 |
| BsrDI | GCAATG | 2 cut(s) | 1592, 3762 |
| BsrI | ACTGG | 5 cut(s) | 114, 2885, 3244, 3304, 3727 |
| BssECI | CCNNGG | 1 cut(s) | 381 |
| BssNAI | GTATAC | 1 cut(s) | 3325 |
| BssNI | GRCGYC | 2 cut(s) | 1150, 1875 |
| BssT1I | CCWWGG | 1 cut(s) | 381 |
| Bst1107I | GTATAC | 1 cut(s) | 3325 |
| Bst2UI | CCWGG | 1 cut(s) | 2161 |
| Bst4CI | ACNGT | 8 cut(s) | 10, 378, 1050, 1232, 1515, 1551, 2632, 2950 |
| Bst6I | CTCTTC | 3 cut(s) | 1235, 3101, 3465 |
| BstACI | GRCGYC | 2 cut(s) | 1150, 1875 |
| BstAFI | CTTAAG | 3 cut(s) | 586, 802, 3205 |
| BstBI | TTCGAA | 1 cut(s) | 3589 |
| BstC8I | GCNNGC | 3 cut(s) | 810, 1487, 3150 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2741 |
| BstFNI | CGCG | 1 cut(s) | 3756 |
| BstH2I | RGCGCY | 1 cut(s) | 2605 |
| BstHHI | GCGC | 3 cut(s) | 2604, 3373, 3758 |
| BstMAI | GTCTC | 6 cut(s) | 363, 972, 1141, 1931, 2313, 2664 |
| BstMCI | CGRYCG | 1 cut(s) | 2036 |
| BstNI | CCWGG | 1 cut(s) | 2161 |
| BstNSI | RCATGY | 5 cut(s) | 620, 645, 836, 1659, 1708 |
| BstSCI | CCNGG | 1 cut(s) | 2159 |
| BstSFI | CTRYAG | 3 cut(s) | 1356, 1455, 3189 |
| BstSLI | GKGCMC | 3 cut(s) | 945, 1642, 2637 |
| BstUI | CGCG | 1 cut(s) | 3756 |
| BstV2I | GAAGAC | 2 cut(s) | 644, 2187 |
| BstX2I | RGATCY | 2 cut(s) | 1375, 2146 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3875 |
| BstYI | RGATCY | 2 cut(s) | 1375, 2146 |
| BstZ17I | GTATAC | 1 cut(s) | 3325 |
| Bsu36I | CCTNAGG | 1 cut(s) | 3480 |
| BsuRI | GGCC | 6 cut(s) | 343, 1485, 1509, 2848, 3077, 3820 |
| BtgZI | GCGATG | 1 cut(s) | 3405 |
| BtrI | CACGTC | 1 cut(s) | 2140 |
| BtsI | GCAGTG | 1 cut(s) | 1878 |
| BtsIMutI | CAGTG | 4 cut(s) | 107, 692, 1878, 2892 |
| Cac8I | GCNNGC | 3 cut(s) | 810, 1487, 3150 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1142, 3387 |
| CciI | TCATGA | 2 cut(s) | 1774, 3576 |
| CfoI | GCGC | 3 cut(s) | 2604, 3373, 3758 |
| Cfr13I | GGNCC | 6 cut(s) | 1484, 1507, 1515, 3242, 3819, 3859 |
| CpoI | CGGWCCG | 1 cut(s) | 1515 |
| CseI | GACGC | 2 cut(s) | 1158, 1864 |
| Csp6I | GTAC | 6 cut(s) | 722, 1527, 2898, 3156, 3254, 3476 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 363, 398 |
| CspI | CGGWCCG | 1 cut(s) | 1515 |
| CviQI | GTAC | 6 cut(s) | 722, 1527, 2898, 3156, 3254, 3476 |
| DraI | TTTAAA | 1 cut(s) | 1342 |
| EaeI | YGGCCR | 1 cut(s) | 2846 |
| Eam1104I | CTCTTC | 3 cut(s) | 1235, 3101, 3465 |
| EarI | CTCTTC | 3 cut(s) | 1235, 3101, 3465 |
| Ecl136II | GAGCTC | 2 cut(s) | 1349, 3047 |
| Eco130I | CCWWGG | 1 cut(s) | 381 |
| Eco147I | AGGCCT | 1 cut(s) | 3077 |
| Eco24I | GRGCYC | 4 cut(s) | 1351, 2910, 3049, 3221 |
| Eco31I | GGTCTC | 1 cut(s) | 2313 |
| Eco32I | GATATC | 1 cut(s) | 3487 |
| Eco47I | GGWCC | 3 cut(s) | 1515, 3242, 3859 |
| Eco53kI | GAGCTC | 2 cut(s) | 1349, 3047 |
| Eco57I | CTGAAG | 5 cut(s) | 50, 245, 744, 2724, 3279 |
| Eco81I | CCTNAGG | 1 cut(s) | 3480 |
| Eco88I | CYCGRG | 1 cut(s) | 451 |
| EcoICRI | GAGCTC | 2 cut(s) | 1349, 3047 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2741 |
| EcoRII | CCWGG | 1 cut(s) | 2159 |
| EcoRV | GATATC | 1 cut(s) | 3487 |
| EcoT14I | CCWWGG | 1 cut(s) | 381 |
| EcoT38I | GRGCYC | 4 cut(s) | 1351, 2910, 3049, 3221 |
| ErhI | CCWWGG | 1 cut(s) | 381 |
| Esp3I | CGTCTC | 2 cut(s) | 363, 1141 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 580, 612, 796, 828, 974, 1006, 2666, 2698 |
| FaqI | GGGAC | 3 cut(s) | 550, 2879, 3792 |
| FauI | CCCGC | 4 cut(s) | 709, 840, 1494, 2557 |
| FauNDI | CATATG | 2 cut(s) | 1306, 1634 |
| FbaI | TGATCA | 2 cut(s) | 657, 1771 |
| FblI | GTMKAC | 2 cut(s) | 1020, 3324 |
| FriOI | GRGCYC | 4 cut(s) | 1351, 2910, 3049, 3221 |
| GlaI | GCGC | 3 cut(s) | 2603, 3372, 3757 |
| GsaI | CCCAGC | 2 cut(s) | 2501, 3751 |
| GsuI | CTGGAG | 5 cut(s) | 564, 1599, 1799, 2433, 3321 |
| HaeII | RGCGCY | 1 cut(s) | 2605 |
| HaeIII | GGCC | 6 cut(s) | 343, 1485, 1509, 2848, 3077, 3820 |
| HapII | CCGG | 4 cut(s) | 1694, 3245, 3547, 3665 |
| HgaI | GACGC | 2 cut(s) | 1158, 1864 |
| HhaI | GCGC | 3 cut(s) | 2604, 3373, 3758 |
| Hin1I | GRCGYC | 2 cut(s) | 1150, 1875 |
| Hin6I | GCGC | 3 cut(s) | 2602, 3371, 3756 |
| HinP1I | GCGC | 3 cut(s) | 2602, 3371, 3756 |
| HincII | GTYRAC | 1 cut(s) | 3432 |
| HindII | GTYRAC | 1 cut(s) | 3432 |
| HindIII | AAGCTT | 2 cut(s) | 918, 3406 |
| HpaII | CCGG | 4 cut(s) | 1694, 3245, 3547, 3665 |
| Hpy166II | GTNNAC | 4 cut(s) | 1021, 2265, 3325, 3432 |
| Hpy8I | GTNNAC | 4 cut(s) | 1021, 2265, 3325, 3432 |
| Hpy99I | CGWCG | 2 cut(s) | 27, 1664 |
| HpyAV | CCTTC | 9 cut(s) | 74, 268, 1093, 1200, 1678, 1865, 3254, 3300, 3409 |
| HpyCH4III | ACNGT | 8 cut(s) | 10, 378, 1050, 1232, 1515, 1551, 2632, 2950 |
| HpyCH4IV | ACGT | 2 cut(s) | 2139, 3184 |
| HpySE526I | ACGT | 2 cut(s) | 2139, 3184 |
| Hsp92I | GRCGYC | 2 cut(s) | 1150, 1875 |
| HspAI | GCGC | 3 cut(s) | 2602, 3371, 3756 |
| Kpn2I | TCCGGA | 3 cut(s) | 1693, 3244, 3546 |
| KpnI | GGTACC | 1 cut(s) | 3479 |
| Ksp22I | TGATCA | 2 cut(s) | 657, 1771 |
| LguI | GCTCTTC | 1 cut(s) | 1235 |
| LmnI | GCTCC | 3 cut(s) | 41, 375, 2940 |
| LweI | GCATC | 7 cut(s) | 1297, 1379, 1903, 2055, 2959, 3077, 3634 |
| MaeII | ACGT | 2 cut(s) | 2139, 3184 |
| MbiI | CCGCTC | 1 cut(s) | 3495 |
| MfeI | CAATTG | 2 cut(s) | 2647, 3854 |
| MflI | RGATCY | 2 cut(s) | 1375, 2146 |
| MhlI | GDGCHC | 9 cut(s) | 945, 1351, 1642, 1976, 2637, 2910, 3049, 3125, 3221 |
| MlyI | GAGTC | 4 cut(s) | 77, 3242, 3521, 3774 |
| MmeI | TCCRAC | 5 cut(s) | 821, 1032, 3018, 3175, 3595 |
| MroI | TCCGGA | 3 cut(s) | 1693, 3244, 3546 |
| MslI | CAYNNNNRTG | 2 cut(s) | 615, 831 |
| MspA1I | CMGCKG | 4 cut(s) | 242, 764, 847, 3384 |
| MspCI | CTTAAG | 3 cut(s) | 586, 802, 3205 |
| MspI | CCGG | 4 cut(s) | 1694, 3245, 3547, 3665 |
| MspR9I | CCNGG | 1 cut(s) | 2161 |
| MunI | CAATTG | 2 cut(s) | 2647, 3854 |
| Mva1269I | GAATGC | 6 cut(s) | 320, 748, 1221, 2124, 3357, 3455 |
| MvaI | CCWGG | 1 cut(s) | 2161 |
| MvnI | CGCG | 1 cut(s) | 3756 |
| NdeI | CATATG | 2 cut(s) | 1306, 1634 |
| NlaIV | GGNNCC | 4 cut(s) | 62, 387, 903, 3477 |
| NmuCI | GTSAC | 5 cut(s) | 4, 101, 1057, 1700, 1876 |
| NspI | RCATGY | 5 cut(s) | 620, 645, 836, 1659, 1708 |
| NspV | TTCGAA | 1 cut(s) | 3589 |
| PaeR7I | CTCGAG | 1 cut(s) | 451 |
| PagI | TCATGA | 2 cut(s) | 1774, 3576 |
| PceI | AGGCCT | 1 cut(s) | 3077 |
| PciI | ACATGT | 3 cut(s) | 641, 832, 1704 |
| PciSI | GCTCTTC | 1 cut(s) | 1235 |
| PctI | GAATGC | 6 cut(s) | 320, 748, 1221, 2124, 3357, 3455 |
| PflFI | GACNNNGTC | 1 cut(s) | 2870 |
| PfoI | TCCNGGA | 1 cut(s) | 2159 |
| Ple19I | CGATCG | 1 cut(s) | 2036 |
| PleI | GAGTC | 4 cut(s) | 77, 3242, 3520, 3774 |
| PpsI | GAGTC | 4 cut(s) | 77, 3242, 3520, 3774 |
| PscI | ACATGT | 3 cut(s) | 641, 832, 1704 |
| PsiI | TTATAA | 2 cut(s) | 1085, 2781 |
| Psp124BI | GAGCTC | 2 cut(s) | 1351, 3049 |
| Psp1406I | AACGTT | 1 cut(s) | 3184 |
| Psp6I | CCWGG | 1 cut(s) | 2159 |
| PspFI | CCCAGC | 2 cut(s) | 2497, 3747 |
| PspGI | CCWGG | 1 cut(s) | 2159 |
| PspN4I | GGNNCC | 4 cut(s) | 62, 387, 903, 3477 |
| PspPI | GGNCC | 6 cut(s) | 1484, 1507, 1515, 3242, 3819, 3859 |
| PspXI | VCTCGAGB | 1 cut(s) | 451 |
| PstI | CTGCAG | 3 cut(s) | 1360, 1459, 3193 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1142, 3387 |
| PsuI | RGATCY | 2 cut(s) | 1375, 2146 |
| PsyI | GACNNNGTC | 1 cut(s) | 2870 |
| PvuI | CGATCG | 1 cut(s) | 2036 |
| PvuII | CAGCTG | 3 cut(s) | 242, 764, 3384 |
| RsaI | GTAC | 6 cut(s) | 723, 1528, 2899, 3157, 3255, 3477 |
| RsaNI | GTAC | 6 cut(s) | 722, 1527, 2898, 3156, 3254, 3476 |
| RseI | CAYNNNNRTG | 2 cut(s) | 615, 831 |
| Rsr2I | CGGWCCG | 1 cut(s) | 1515 |
| RsrII | CGGWCCG | 1 cut(s) | 1515 |
| SacI | GAGCTC | 2 cut(s) | 1351, 3049 |
| SapI | GCTCTTC | 1 cut(s) | 1235 |
| Sau96I | GGNCC | 6 cut(s) | 1484, 1507, 1515, 3242, 3819, 3859 |
| ScaI | AGTACT | 1 cut(s) | 2899 |
| SchI | GAGTC | 4 cut(s) | 77, 3242, 3521, 3774 |
| ScrFI | CCNGG | 1 cut(s) | 2161 |
| SduI | GDGCHC | 9 cut(s) | 945, 1351, 1642, 1976, 2637, 2910, 3049, 3125, 3221 |
| SfaNI | GCATC | 7 cut(s) | 1297, 1379, 1903, 2055, 2959, 3077, 3634 |
| SfcI | CTRYAG | 3 cut(s) | 1356, 1455, 3189 |
| Sfr274I | CTCGAG | 1 cut(s) | 451 |
| SfuI | TTCGAA | 1 cut(s) | 3589 |
| SinI | GGWCC | 3 cut(s) | 1515, 3242, 3859 |
| SlaI | CTCGAG | 1 cut(s) | 451 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 615, 831 |
| SmlI | CTYRAG | 5 cut(s) | 451, 586, 802, 3205, 3782 |
| SmoI | CTYRAG | 5 cut(s) | 451, 586, 802, 3205, 3782 |
| SpeI | ACTAGT | 1 cut(s) | 3707 |
| SseBI | AGGCCT | 1 cut(s) | 3077 |
| SsiI | CCGC | 7 cut(s) | 702, 725, 847, 1487, 2023, 2550, 3493 |
| SspI | AATATT | 1 cut(s) | 2256 |
| SstI | GAGCTC | 2 cut(s) | 1351, 3049 |
| StuI | AGGCCT | 1 cut(s) | 3077 |
| StyD4I | CCNGG | 1 cut(s) | 2159 |
| StyI | CCWWGG | 1 cut(s) | 381 |
| TaaI | ACNGT | 8 cut(s) | 10, 378, 1050, 1232, 1515, 1551, 2632, 2950 |
| TaiI | ACGT | 2 cut(s) | 2142, 3187 |
| TatI | WGTACW | 1 cut(s) | 2897 |
| TscAI | CASTG | 4 cut(s) | 114, 699, 1885, 2892 |
| TseFI | GTSAC | 5 cut(s) | 4, 101, 1057, 1700, 1876 |
| Tsp45I | GTSAC | 5 cut(s) | 4, 101, 1057, 1700, 1876 |
| TspGWI | ACGGA | 5 cut(s) | 40, 345, 1507, 2640, 3449 |
| TspRI | CASTG | 4 cut(s) | 114, 699, 1885, 2892 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2870 |
| Vha464I | CTTAAG | 3 cut(s) | 586, 802, 3205 |
| VpaK11BI | GGWCC | 3 cut(s) | 1515, 3242, 3859 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2741 |
| XapI | RAATTY | 3 cut(s) | 2166, 2775, 2960 |
| XbaI | TCTAGA | 1 cut(s) | 2417 |
| XceI | RCATGY | 5 cut(s) | 620, 645, 836, 1659, 1708 |
| XhoI | CTCGAG | 1 cut(s) | 451 |
| XmiI | GTMKAC | 2 cut(s) | 1020, 3324 |
| ZrmI | AGTACT | 1 cut(s) | 2899 |