Rw1G002440

RNA helicase SDE3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000595
Physical Location & Seq
Reverse (-)
4459326 .. 4461631
2306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G002440.1

Sequence Viewer

Length: 1635 bp
ATGGGGTCATCTAATTCTAAACCACATCCAGCCTCCGCAGAATCCCCACCATATTATTCTAAACCATCTCCATCTCCCCCGAAACCCCCACCATATTCTTCTAAACCACCTTCATCTCCAGCTTGCCCACAACCCCCACCATATTCTTCTAAACCACCTTCATCCCCAGCTTCTTCTAAACCACCTTCATCTCCAGTTTCCCCACAACCCCCAGCATATTCTTTTAAGCCACCTTCATCCCCAGCATATTCTTCTAAACCATCTTCATCTCCATTTTCCCCAAAGTGCCCTCCTGTCTTTAAGTCAGTTCTACGCCCAGCCTCCTCCTCCTCAAATAATGATGATATAAGTCAACACCAACAATATGAGAAGAGAACAGCTTTTGTGTGTCTTGAAAAGGATCCATTACCTGTATTCATGATTCCTGAGGATATCGAAGCCTTGATCAAGAAAGAAATTGCGCCCAAAGTTCTGAATCGCCCATTATCTCCCACAACATACAAGGACTACTTTGCCGCTCTCTTATATTCTGAAGATTTCTACTTGGAGAAATGGAGTGATTTCCTTTTGAAGGGTGTGACATTAGCGTTGGATGAAAGTTCAATTTATAAAAACCGGAAAAAGGAAGCACTTTATAAAAATCGGAAAAAGGAAGATAAGGAAGACAAAACCTTTGTAGCATTTGAGCTTGATTGTGTTCCTGAGAAACGGCCATTCCTCTTATCAAGGGACTTGGTCCTTGCACGACCAGTGGGTAATAGTACTACTGAGCCCTTTAAGGGCCTCATCTATAAAGTTGTTGGGAGCAATCGCGTTTTGGTTGAATTTGAGGATGACTTTTATTCTTATCATCATTCCAACAAAAAATATGATATCAGCTTCTCATTCAATAGAGTTTGTTTGAAAAGAGCCCACCATGCCGTAAAAGCTGCATCAGATGCCTTGTTTCAGAACTTCCTCTTCCCTGACTGTGACTCACGAGCAAGCATTCCTACTGCACCAGCTCTGCTTTCTACTACCTGTCATAAGCTTGATCAAGATCAACGTTCGGCAGTCGGACATATCTTAAGGATTCAGGGCTCACCACCTTATGTAGTAACTGAACCTTCAAGAACTGGAGTGGTTGTTAGTGAAGCAGTATACCAATTATGTCGGAAGTCACCAGAGTATCGCATTCTTATCTGTGCACCTACTAACAGCTGCTGCGATATGCTGATGAGAAGCTTGGTGAAGGTGATTCCAGGGTCGACTATGTTTCGTGCCAATGCTGCATTCCGAGAGAGAGATGAGGTACCTGAGGACATCCTCCGCTCATCCCTTTACAAAGAGTCTTGTTTTTCTTGTCCTGCAATAGAGAAACTCCGGGAATACAAGGTGATTTTCTCAACTTTCGTGAGTAGCTTCCGACTACATGATAAAGGCATAGCTGCTGGACATTTTAGCCATATTTTTCTGGTGGATGCTTCATCTACTATTGAGCCGGAAACATTGGTCGCCCTGACTAACTTCGCTGTCAAGGCCACTACTGTTATAGTTACTGGTAATCACGGAAATAGTCCGCTCTGGGTTCGCGCTGACATTGCAAGGAAAAACAAACAACTCTACCAAAGAGAATCAAATGAGAGGCTTATATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

544

Amino Acids

60.71

Weight (kDa)

9.07

Isoelectric Point (pI)

66.84

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MOV-10_beta-barrel PF21634 218 - 294 5.8e-10 Helicase MOV-10, beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000595)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g37100 FvH4_4g37100 FvH4_4g37100
malus_domestica MD13G1238300.v1.1 MD16G1243100.v1.1 MD16G1243200.v1.1
prunus_persica Prupe.1G070100_v2.0.a1 Prupe.1G070200_v2.0.a1 Prupe.1G070300_v2.0.a1 Prupe.1G070300_v2.0.a1
pyrus_communis pycom13g21070 pycom16g20390 pycom16g20400
rosa_chinensis RchiOBHm_Chr1g0318071 RchiOBHm_Chr1g0318111 RchiOBHm_Chr4g0446861 RchiOBHm_Chr4g0446881 RchiOBHm_Chr4g0446891
rosa_laevigata RLG00000005623 RLG00000005624 RLG00000009337 RLG00000030560 RLG00000030566
rosa_multiflora Rmu_co8177450.1_g000001 Rmu_sc0001753.1_g000012 Rmu_sc0001753.1_g000013 Rmu_sc0001753.1_g000014 Rmu_sc0001753.1_g000015 Rmu_sc0011424.1_g000009 Rmu_sc0011424.1_g000020 Rmu_sc0034555.1_g000001 Rmu_ssc0000008.1_g000002
rosa_roxburghii Rroxscaffold_4G00329530 Rroxscaffold_4G00329590 Rroxscaffold_4G00329800 Rroxscaffold_4G00329810 Rroxscaffold_4G00329860 Rroxscaffold_4G00329910 Rroxscaffold_4G00330030 Rroxscaffold_5G00343610 Rroxscaffold_5G00348280 Rroxscaffold_5G00387220 Rroxscaffold_5G00387230
rosa_rugosa Rorug01G0019100 Rorug01G0019100 Rorug01G0019500 Rorug01G0019600 Rorug04G0010100 Rorug04G0375200 Rorug04G0375300 Rorug04G0375400 Rorug04G0375500 Rorug04G0375600 Rorug04G0375700
rosa_samantha Rh1AG030700 Rh1AG030900 Rh1BG026900 Rh1CG029500 Rh1CG029700 Rh1DG040500 Rh4AG088100 Rh4AG436700 Rh4AG436800 Rh4AG436900 Rh4BG084700 Rh4BG445800 Rh4BG445900 Rh4BG446100 Rh4CG096300 Rh4CG463100 Rh4CG463200 Rh4CG463400 Rh4DG444500 Rh4DG444600 Rh4DG444700
rosa_wichuraiana Rw1G002420 Rw1G002440 Rw1G002480 Rw4G037360 Rw4G037370 Rw4G037380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 609, 636
Acc65I GGTACC 1 cut(s) 1291
AccB1I GGYRCC 1 cut(s) 1291
AccBSI CCGCTC 3 cut(s) 518, 1311, 1561
AccI GTMKAC 2 cut(s) 1140, 1247
AccII CGCG 2 cut(s) 813, 1572
AciI CCGC 4 cut(s) 36, 516, 1309, 1559
AclI AACGTT 1 cut(s) 1045
AclWI GGATC 2 cut(s) 395, 408
AcoI YGGCCR 1 cut(s) 710
AcsI RAATTY 1 cut(s) 824
AcuI CTGAAG 1 cut(s) 552
AfaI GTAC 2 cut(s) 763, 1293
AfiI CCNNNNNNNGG 3 cut(s) 571, 622, 779
AflII CTTAAG 1 cut(s) 1066
AgsI TTSAA 7 cut(s) 395, 571, 603, 824, 889, 904, 1110
AjnI CCWGG 1 cut(s) 1240
AjuI GAANNNNNNNTTGG 2 cut(s) 1256, 1288
Alw21I GWGCWC 1 cut(s) 1189
Alw44I GTGCAC 1 cut(s) 1185
AlwI GGATC 2 cut(s) 395, 408
AlwNI CAGNNNCTG 1 cut(s) 1203
AoxI GGCC 3 cut(s) 710, 781, 1518
ApaLI GTGCAC 1 cut(s) 1185
ApeKI GCWGC 5 cut(s) 929, 1200, 1203, 1268, 1427
ApoI RAATTY 1 cut(s) 824
ArsI GACNNNNNNTTYG 2 cut(s) 656, 688
Asp718I GGTACC 1 cut(s) 1291
AspLEI GCGC 2 cut(s) 463, 1574
AspS9I GGNCC 2 cut(s) 736, 781
AsuC2I CCSGG 1 cut(s) 1364
AsuHPI GGTGA 5 cut(s) 1074, 1152, 1240, 1246, 1387
AvaII GGWCC 1 cut(s) 736
AxyI CCTNAGG 2 cut(s) 426, 1296
BaeGI GKGCMC 2 cut(s) 290, 1189
BaeI ACNNNNGTAYC 2 cut(s) 1151, 1184
BamHI GGATCC 1 cut(s) 400
BanI GGYRCC 1 cut(s) 1291
BanII GRGCYC 3 cut(s) 774, 913, 1082
BauI CACGAG 1 cut(s) 978
BbsI GAAGAC 1 cut(s) 669
Bbv12I GWGCWC 1 cut(s) 1189
BbvI GCAGC 5 cut(s) 916, 1187, 1190, 1255, 1414
BccI CCATC 3 cut(s) 73, 79, 268
BceAI ACGGC 2 cut(s) 725, 905
BciT130I CCWGG 1 cut(s) 1242
BclI TGATCA 2 cut(s) 444, 1033
BcnI CCSGG 1 cut(s) 1364
BfrI CTTAAG 1 cut(s) 1066
BisI GCNGC 6 cut(s) 516, 930, 1201, 1204, 1269, 1428
BlsI GCNGC 6 cut(s) 517, 931, 1202, 1205, 1270, 1429
BmcAI AGTACT 1 cut(s) 763
Bme1390I CCNGG 2 cut(s) 1242, 1364
Bme18I GGWCC 1 cut(s) 736
BmgT120I GGNCC 2 cut(s) 736, 781
BmiI GGNNCC 2 cut(s) 402, 1293
BmrFI CCNGG 2 cut(s) 1242, 1364
BmsI GCATC 3 cut(s) 928, 941, 1450
BpiI GAAGAC 1 cut(s) 669
BpmI CTGGAG 3 cut(s) 102, 177, 1137
BpuMI CCSGG 1 cut(s) 1364
BsaBI GATNNNNATC 1 cut(s) 1038
BsaJI CCNNGG 1 cut(s) 1241
BsaWI WCCGGW 1 cut(s) 615
BsaXI ACNNNNNCTCC 2 cut(s) 1110, 1140
Bsc4I CCNNNNNNNGG 3 cut(s) 571, 622, 779
Bse1I ACTGG 4 cut(s) 194, 749, 1120, 1543
Bse21I CCTNAGG 2 cut(s) 426, 1296
Bse3DI GCAATG 1 cut(s) 1578
Bse8I GATNNNNATC 1 cut(s) 1038
BseBI CCWGG 1 cut(s) 1242
BseDI CCNNGG 1 cut(s) 1241
BseGI GGATG 8 cut(s) 25, 161, 236, 598, 838, 1302, 1313, 1465
BseJI GATNNNNATC 1 cut(s) 1038
BseLI CCNNNNNNNGG 3 cut(s) 571, 622, 779
BseMI GCAATG 1 cut(s) 1578
BseMII CTCAG 4 cut(s) 417, 693, 759, 1287
BseNI ACTGG 4 cut(s) 194, 749, 1120, 1543
BseRI GAGGAG 3 cut(s) 313, 316, 319
BseSI GKGCMC 2 cut(s) 290, 1189
BseXI GCAGC 5 cut(s) 916, 1187, 1190, 1255, 1414
BseYI CCCAGC 4 cut(s) 166, 211, 241, 316
BsgI GTGCAG 1 cut(s) 981
Bsh1236I CGCG 2 cut(s) 813, 1572
BshFI GGCC 3 cut(s) 712, 783, 1520
BshNI GGYRCC 1 cut(s) 1291
BsiHKAI GWGCWC 1 cut(s) 1189
BsiSI CCGG 3 cut(s) 616, 1363, 1481
BslFI GGGAC 1 cut(s) 743
BslI CCNNNNNNNGG 3 cut(s) 571, 622, 779
BsmFI GGGAC 1 cut(s) 743
BsmI GAATGC 3 cut(s) 987, 1173, 1271
BsnI GGCC 3 cut(s) 712, 783, 1520
Bsp1286I GDGCHC 5 cut(s) 290, 774, 913, 1082, 1189
Bsp143I GATC 4 cut(s) 400, 444, 1033, 1039
BspACI CCGC 4 cut(s) 36, 516, 1309, 1559
BspANI GGCC 3 cut(s) 712, 783, 1520
BspCNI CTCAG 4 cut(s) 418, 694, 760, 1288
BspFNI CGCG 2 cut(s) 813, 1572
BspHI TCATGA 1 cut(s) 417
BspLI GGNNCC 2 cut(s) 402, 1293
BspPI GGATC 2 cut(s) 395, 408
BspT107I GGYRCC 1 cut(s) 1291
BspTI CTTAAG 1 cut(s) 1066
BsrBI CCGCTC 3 cut(s) 518, 1311, 1561
BsrDI GCAATG 1 cut(s) 1578
BsrI ACTGG 4 cut(s) 194, 749, 1120, 1543
BssECI CCNNGG 1 cut(s) 1241
BssMI GATC 4 cut(s) 400, 444, 1033, 1039
BssNAI GTATAC 1 cut(s) 1141
BssSI CACGAG 1 cut(s) 978
Bst1107I GTATAC 1 cut(s) 1141
Bst2BI CACGAG 1 cut(s) 978
Bst2UI CCWGG 1 cut(s) 1242
Bst4CI ACNGT 2 cut(s) 971, 1528
Bst6I CTCTTC 2 cut(s) 365, 965
BstAFI CTTAAG 1 cut(s) 1066
BstAPI GCANNNNNTGC 1 cut(s) 938
BstC8I GCNNGC 2 cut(s) 124, 985
BstDEI CTNAG 4 cut(s) 426, 702, 768, 1296
BstENI CCTNNNNNAGG 1 cut(s) 569
BstF5I GGATG 8 cut(s) 25, 161, 236, 598, 838, 1302, 1313, 1465
BstFNI CGCG 2 cut(s) 813, 1572
BstHHI GCGC 2 cut(s) 463, 1574
BstKTI GATC 4 cut(s) 403, 447, 1036, 1042
BstMBI GATC 4 cut(s) 400, 444, 1033, 1039
BstMWI GCNNNNNNNGC 6 cut(s) 917, 926, 938, 1268, 1517, 1580
BstNI CCWGG 1 cut(s) 1242
BstSCI CCNGG 2 cut(s) 1240, 1362
BstSLI GKGCMC 2 cut(s) 290, 1189
BstUI CGCG 2 cut(s) 813, 1572
BstV1I GCAGC 5 cut(s) 916, 1187, 1190, 1255, 1414
BstV2I GAAGAC 1 cut(s) 669
BstX2I RGATCY 1 cut(s) 400
BstYI RGATCY 1 cut(s) 400
BstZ17I GTATAC 1 cut(s) 1141
Bsu36I CCTNAGG 2 cut(s) 426, 1296
BsuRI GGCC 3 cut(s) 712, 783, 1520
BtsCI GGATG 8 cut(s) 25, 161, 236, 598, 838, 1302, 1313, 1465
BtsIMutI CAGTG 1 cut(s) 756
Cac8I GCNNGC 2 cut(s) 124, 985
CaiI CAGNNNCTG 1 cut(s) 1203
CciI TCATGA 1 cut(s) 417
CfoI GCGC 2 cut(s) 463, 1574
Cfr13I GGNCC 2 cut(s) 736, 781
Csp6I GTAC 2 cut(s) 762, 1292
CviAII CATG 3 cut(s) 418, 917, 1412
CviQI GTAC 2 cut(s) 762, 1292
DdeI CTNAG 4 cut(s) 426, 702, 768, 1296
DpnI GATC 4 cut(s) 402, 446, 1035, 1041
DpnII GATC 4 cut(s) 400, 444, 1033, 1039
EaeI YGGCCR 1 cut(s) 710
Eam1104I CTCTTC 2 cut(s) 365, 965
EarI CTCTTC 2 cut(s) 365, 965
Eco24I GRGCYC 3 cut(s) 774, 913, 1082
Eco32I GATATC 2 cut(s) 433, 874
Eco47I GGWCC 1 cut(s) 736
Eco57I CTGAAG 1 cut(s) 552
Eco81I CCTNAGG 2 cut(s) 426, 1296
EcoNI CCTNNNNNAGG 1 cut(s) 569
EcoO109I RGGNCCY 1 cut(s) 781
EcoRII CCWGG 1 cut(s) 1240
EcoRV GATATC 2 cut(s) 433, 874
EcoT38I GRGCYC 3 cut(s) 774, 913, 1082
FaeI CATG 3 cut(s) 421, 920, 1415
FalI AAGNNNNNCTT 2 cut(s) 494, 526
FaqI GGGAC 1 cut(s) 743
FatI CATG 3 cut(s) 417, 916, 1411
FbaI TGATCA 2 cut(s) 444, 1033
FblI GTMKAC 2 cut(s) 1140, 1247
Fnu4HI GCNGC 6 cut(s) 516, 930, 1201, 1204, 1269, 1428
FokI GGATG 8 cut(s) 12, 148, 223, 605, 845, 1289, 1300, 1472
FriOI GRGCYC 3 cut(s) 774, 913, 1082
Fsp4HI GCNGC 6 cut(s) 516, 930, 1201, 1204, 1269, 1428
GlaI GCGC 2 cut(s) 462, 1573
GluI GCNGC 6 cut(s) 516, 930, 1201, 1204, 1269, 1428
GsaI CCCAGC 4 cut(s) 170, 215, 245, 320
GsuI CTGGAG 3 cut(s) 102, 177, 1137
HaeIII GGCC 3 cut(s) 712, 783, 1520
HapII CCGG 3 cut(s) 616, 1363, 1481
HhaI GCGC 2 cut(s) 463, 1574
Hin1II CATG 3 cut(s) 421, 920, 1415
Hin6I GCGC 2 cut(s) 461, 1572
HinP1I GCGC 2 cut(s) 461, 1572
HincII GTYRAC 2 cut(s) 353, 1248
HindII GTYRAC 2 cut(s) 353, 1248
HindIII AAGCTT 2 cut(s) 1028, 1222
HinfI GANTC 8 cut(s) 41, 421, 475, 974, 1072, 1237, 1328, 1613
HpaII CCGG 3 cut(s) 616, 1363, 1481
HphI GGTGA 5 cut(s) 1074, 1152, 1240, 1246, 1387
Hpy166II GTNNAC 4 cut(s) 353, 1141, 1187, 1248
Hpy188I TCNGA 9 cut(s) 474, 532, 645, 937, 951, 1058, 1155, 1277, 1406
Hpy188III TCNNGA 9 cut(s) 392, 418, 425, 448, 701, 978, 1037, 1110, 1393
Hpy8I GTNNAC 4 cut(s) 353, 1141, 1187, 1248
HpyAV CCTTC 7 cut(s) 120, 168, 195, 243, 565, 1116, 1225
HpyCH4III ACNGT 2 cut(s) 971, 1528
HpyCH4IV ACGT 1 cut(s) 1045
HpyCH4V TGCA 7 cut(s) 743, 932, 998, 1187, 1271, 1349, 1583
HpyF10VI GCNNNNNNNGC 6 cut(s) 917, 926, 938, 1268, 1517, 1580
HpyF3I CTNAG 4 cut(s) 426, 702, 768, 1296
HpySE526I ACGT 1 cut(s) 1045
Hsp92II CATG 3 cut(s) 421, 920, 1415
HspAI GCGC 2 cut(s) 461, 1572
KpnI GGTACC 1 cut(s) 1295
Ksp22I TGATCA 2 cut(s) 444, 1033
Kzo9I GATC 4 cut(s) 400, 444, 1033, 1039
LmnI GCTCC 1 cut(s) 804
Lsp1109I GCAGC 5 cut(s) 916, 1187, 1190, 1255, 1414
LweI GCATC 3 cut(s) 928, 941, 1450
MaeII ACGT 1 cut(s) 1045
MaeIII GTNAC 5 cut(s) 577, 971, 1096, 1158, 1534
MalI GATC 4 cut(s) 402, 446, 1035, 1041
MbiI CCGCTC 3 cut(s) 518, 1311, 1561
MboI GATC 4 cut(s) 400, 444, 1033, 1039
MflI RGATCY 1 cut(s) 400
MhlI GDGCHC 5 cut(s) 290, 774, 913, 1082, 1189
MluCI AATT 5 cut(s) 13, 456, 603, 824, 1145
MlyI GAGTC 2 cut(s) 968, 1337
MmeI TCCRAC 5 cut(s) 570, 882, 1036, 1133, 1429
MseI TTAA 4 cut(s) 225, 300, 777, 1067
MspA1I CMGCKG 1 cut(s) 1200
MspCI CTTAAG 1 cut(s) 1066
MspI CCGG 3 cut(s) 616, 1363, 1481
MspR9I CCNGG 2 cut(s) 1242, 1364
Mva1269I GAATGC 3 cut(s) 987, 1173, 1271
MvaI CCWGG 1 cut(s) 1242
MvnI CGCG 2 cut(s) 813, 1572
MwoI GCNNNNNNNGC 6 cut(s) 917, 926, 938, 1268, 1517, 1580
NciI CCSGG 1 cut(s) 1364
NdeII GATC 4 cut(s) 400, 444, 1033, 1039
NlaIII CATG 3 cut(s) 421, 920, 1415
NlaIV GGNNCC 2 cut(s) 402, 1293
NmuCI GTSAC 3 cut(s) 577, 971, 1158
PagI TCATGA 1 cut(s) 417
PctI GAATGC 3 cut(s) 987, 1173, 1271
PfeI GAWTC 6 cut(s) 41, 421, 475, 1072, 1237, 1613
PflFI GACNNNGTC 1 cut(s) 734
PfoI TCCNGGA 1 cut(s) 1362
PkrI GCNGC 6 cut(s) 517, 931, 1202, 1205, 1270, 1429
PleI GAGTC 2 cut(s) 968, 1336
PpsI GAGTC 2 cut(s) 968, 1336
PsiI TTATAA 2 cut(s) 609, 636
Psp1406I AACGTT 1 cut(s) 1045
Psp6I CCWGG 1 cut(s) 1240
PspFI CCCAGC 4 cut(s) 166, 211, 241, 316
PspGI CCWGG 1 cut(s) 1240
PspN4I GGNNCC 2 cut(s) 402, 1293
PspPI GGNCC 2 cut(s) 736, 781
PstNI CAGNNNCTG 1 cut(s) 1203
PsuI RGATCY 1 cut(s) 400
PsyI GACNNNGTC 1 cut(s) 734
PvuII CAGCTG 1 cut(s) 1200
RsaI GTAC 2 cut(s) 763, 1293
RsaNI GTAC 2 cut(s) 762, 1292
SalI GTCGAC 1 cut(s) 1246
SaqAI TTAA 4 cut(s) 225, 300, 777, 1067
SatI GCNGC 6 cut(s) 516, 930, 1201, 1204, 1269, 1428
Sau3AI GATC 4 cut(s) 400, 444, 1033, 1039
Sau96I GGNCC 2 cut(s) 736, 781
ScaI AGTACT 1 cut(s) 763
SchI GAGTC 2 cut(s) 968, 1337
ScrFI CCNGG 2 cut(s) 1242, 1364
SduI GDGCHC 5 cut(s) 290, 774, 913, 1082, 1189
SfaNI GCATC 3 cut(s) 928, 941, 1450
SinI GGWCC 1 cut(s) 736
SmlI CTYRAG 1 cut(s) 1066
SmoI CTYRAG 1 cut(s) 1066
Sse9I AATT 5 cut(s) 13, 456, 603, 824, 1145
SsiI CCGC 4 cut(s) 36, 516, 1309, 1559
StyD4I CCNGG 2 cut(s) 1240, 1362
TaaI ACNGT 2 cut(s) 971, 1528
TaiI ACGT 1 cut(s) 1048
TaqI TCGA 2 cut(s) 435, 1247
TasI AATT 5 cut(s) 13, 456, 603, 824, 1145
TatI WGTACW 1 cut(s) 761
TauI GCSGC 1 cut(s) 518
TfiI GAWTC 6 cut(s) 41, 421, 475, 1072, 1237, 1613
Tru1I TTAA 4 cut(s) 225, 300, 777, 1067
Tru9I TTAA 4 cut(s) 225, 300, 777, 1067
TscAI CASTG 1 cut(s) 756
TseFI GTSAC 3 cut(s) 577, 971, 1158
TseI GCWGC 5 cut(s) 929, 1200, 1203, 1268, 1427
Tsp45I GTSAC 3 cut(s) 577, 971, 1158
TspDTI ATGAA 8 cut(s) 102, 150, 177, 225, 255, 406, 609, 1455
TspGWI ACGGA 1 cut(s) 1563
TspRI CASTG 1 cut(s) 756
Tth111I GACNNNGTC 1 cut(s) 734
Vha464I CTTAAG 1 cut(s) 1066
VneI GTGCAC 1 cut(s) 1185
VpaK11BI GGWCC 1 cut(s) 736
XagI CCTNNNNNAGG 1 cut(s) 569
XapI RAATTY 1 cut(s) 824
XmiI GTMKAC 2 cut(s) 1140, 1247
ZrmI AGTACT 1 cut(s) 763
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.