Rh1BG026900

RNA helicase SDE3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000595
Physical Location & Seq
Reverse (-)
3687012 .. 3689215
2204 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG026900.1

Sequence Viewer

Length: 1584 bp
ATGGGGTCATCTAATTCTAAATCACATCCAACCTCCGCAGAATCCCCACCATATTATTCTAAACCATCTCCATCTTCCCCGAAACCCCCACCATATTCTTCTAAACCACCTTCATCTCCAGCTTCCCCACAACCCCCACCATATTCTTCTAAACCACCTTCATCCCCAGCTTCTTCTAAACCACCTTCATCTCCAGTTTCCCCACAACCCCCAGCATGTTCTTCTAAGCCACCTTCATCCCCAGCATATTCTTCTAAACCACCTTCATCTCCAGTTTCCCCACAACCCCCAGCATATTCTTCTAAACCATCTTCATCTCCATCTTCCCCAAAACACCCTCCAGCACATTTTTCTATACCATGTCCATCTCCATCTCCACCTCCATCTCCATCTCCATCTCCTTCTCCATCTCCATCTCCATCTCCCTCAAAGTGCCCTCCTGTCTTTAAGTCAGTTCTACGCCCAGCCTCCTCTTCCTCAAATAATGATGATATAAGTCAACACCAACAATATGGGAAGAGAACAGCTTATGTGTGTGTTGAAGAGGATCAATTACCTGTATTCATTATTCCTGAGGATGTCGAAGCCTTGATCAAGAAAGAAATTGCGCCCAAAGTTCTGAATTGCCCATTATCTCCCACAACATACAAGGACTACTTTGCCGCTCTCTTATATTCTGAAGATTTCTACTTGGAGAAATGGAGTGATTTCCTTTTGAAGGGTGTGACATTAGCGTTGGATGAAAGTTCAATTTATAAAAACCGGAAAAAGGAAGCACTTTATAAAAATCGGAAAAAGGAAGATAAGGAAGACAAAACCTTTGTAGCATTTGAGCTTGATCGTGTTCCTGAGGAACAGCCATTCCTCTTATCAAGGGACTCGGTCCTTGCACGACCAGTGGGTAAGAGTACTACTGAGCCCTTTAAGGGCCTCATCTATAAAGTTGTTGGGAGCAATCGCGTTTTGGTTGAATTTGAGGATGGCTTTTATTCTTATCATCATTCCAACAAAAAATATGATATCAGCTTCTCATTCAATAGAGTTTGTTTGAAAAGAGCCCACCATGCAGTAAAAGGTGCATCAGATGCCTTGTTTCATAACTTCCTCTTCCCTGACTGTGACTCACGAGCAAGCATTCCTGCTGCACCAGCTCTGCTTTCTACTACCTGTCATAAGCTTGATCAAGATCAACGTTCTGCAGTCAGACATATCTTAAGGATTCAGGGCTCACCACCTTATGTAGTAACTGGTCCGGACTGTGAAGGCAAATCTTTTGCATATTTAAGAGAACCTTCAAGAACTGGAGTGGTTGTTAGTGAAGCAGTATACCAATTATGTCGGAAATCACCAGAGTATCGCATTCTTATCTGTGCGCCTACTAACAGCTGCTGCGATATGCTGATGAGAAGCTTGGTGAAGGTGATTCCAGAGTCGACTATGTTTCGTGCCAATGCTGCATTCCGAGAGAGAGATGAGGTACCTGAGGACATCCTCCGCTCATCCCTTTACAAAGAGTCTTGTTTTTCTTGTCCTGCAATAGAAACTCCGGGAATACAAGGTGATTTTCTCAACTTTCATGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

527

Amino Acids

57.88

Weight (kDa)

8.7

Isoelectric Point (pI)

85.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MOV-10_beta-barrel PF21634 267 - 343 2e-08 Helicase MOV-10, beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000595)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g37100 FvH4_4g37100 FvH4_4g37100
malus_domestica MD13G1238300.v1.1 MD16G1243100.v1.1 MD16G1243200.v1.1
prunus_persica Prupe.1G070100_v2.0.a1 Prupe.1G070200_v2.0.a1 Prupe.1G070300_v2.0.a1 Prupe.1G070300_v2.0.a1
pyrus_communis pycom13g21070 pycom16g20390 pycom16g20400
rosa_chinensis RchiOBHm_Chr1g0318071 RchiOBHm_Chr1g0318111 RchiOBHm_Chr4g0446861 RchiOBHm_Chr4g0446881 RchiOBHm_Chr4g0446891
rosa_laevigata RLG00000005623 RLG00000005624 RLG00000009337 RLG00000030560 RLG00000030566
rosa_multiflora Rmu_co8177450.1_g000001 Rmu_sc0001753.1_g000012 Rmu_sc0001753.1_g000013 Rmu_sc0001753.1_g000014 Rmu_sc0001753.1_g000015 Rmu_sc0011424.1_g000009 Rmu_sc0011424.1_g000020 Rmu_sc0034555.1_g000001 Rmu_ssc0000008.1_g000002
rosa_roxburghii Rroxscaffold_4G00329530 Rroxscaffold_4G00329590 Rroxscaffold_4G00329800 Rroxscaffold_4G00329810 Rroxscaffold_4G00329860 Rroxscaffold_4G00329910 Rroxscaffold_4G00330030 Rroxscaffold_5G00343610 Rroxscaffold_5G00348280 Rroxscaffold_5G00387220 Rroxscaffold_5G00387230
rosa_rugosa Rorug01G0019100 Rorug01G0019100 Rorug01G0019500 Rorug01G0019600 Rorug04G0010100 Rorug04G0375200 Rorug04G0375300 Rorug04G0375400 Rorug04G0375500 Rorug04G0375600 Rorug04G0375700
rosa_samantha Rh1AG030700 Rh1AG030900 Rh1BG026900 Rh1CG029500 Rh1CG029700 Rh1DG040500 Rh4AG088100 Rh4AG436700 Rh4AG436800 Rh4AG436900 Rh4BG084700 Rh4BG445800 Rh4BG445900 Rh4BG446100 Rh4CG096300 Rh4CG463100 Rh4CG463200 Rh4CG463400 Rh4DG444500 Rh4DG444600 Rh4DG444700
rosa_wichuraiana Rw1G002420 Rw1G002440 Rw1G002480 Rw4G037360 Rw4G037370 Rw4G037380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 756, 783
Acc65I GGTACC 1 cut(s) 1477
AccB1I GGYRCC 1 cut(s) 1477
AccBSI CCGCTC 2 cut(s) 665, 1497
AccI GTMKAC 2 cut(s) 1326, 1433
AccII CGCG 1 cut(s) 960
AccIII TCCGGA 1 cut(s) 1252
AciI CCGC 3 cut(s) 36, 663, 1495
AclI AACGTT 1 cut(s) 1192
AclWI GGATC 1 cut(s) 555
AcsI RAATTY 1 cut(s) 971
AcuI CTGAAG 1 cut(s) 699
AfaI GTAC 2 cut(s) 910, 1479
AfiI CCNNNNNNNGG 3 cut(s) 718, 769, 926
AflII CTTAAG 1 cut(s) 1213
AgsI TTSAA 7 cut(s) 542, 718, 750, 971, 1036, 1051, 1296
AjuI GAANNNNNNNTTGG 2 cut(s) 1442, 1474
AloI GAACNNNNNNTCC 2 cut(s) 846, 878
AluBI AGCT 9 cut(s) 122, 170, 527, 835, 1026, 1151, 1177, 1386, 1410
AluI AGCT 9 cut(s) 122, 170, 527, 835, 1026, 1151, 1177, 1386, 1410
AlwI GGATC 1 cut(s) 555
AlwNI CAGNNNCTG 1 cut(s) 1389
Aor13HI TCCGGA 1 cut(s) 1252
AoxI GGCC 1 cut(s) 928
ApeKI GCWGC 4 cut(s) 1142, 1386, 1389, 1454
ApoI RAATTY 1 cut(s) 971
ArsI GACNNNNNNTTYG 2 cut(s) 803, 835
Asp718I GGTACC 1 cut(s) 1477
AspLEI GCGC 2 cut(s) 610, 1375
AspS9I GGNCC 3 cut(s) 883, 928, 1250
AsuC2I CCSGG 1 cut(s) 1548
AsuHPI GGTGA 5 cut(s) 1221, 1338, 1426, 1432, 1571
AvaII GGWCC 2 cut(s) 883, 1250
AxyI CCTNAGG 3 cut(s) 573, 849, 1482
BaeGI GKGCMC 1 cut(s) 437
BaeI ACNNNNGTAYC 2 cut(s) 1337, 1370
BanI GGYRCC 1 cut(s) 1477
BanII GRGCYC 3 cut(s) 921, 1060, 1229
BauI CACGAG 1 cut(s) 1125
BbsI GAAGAC 1 cut(s) 816
BbvI GCAGC 4 cut(s) 1129, 1373, 1376, 1441
BclI TGATCA 2 cut(s) 591, 1180
BcnI CCSGG 1 cut(s) 1548
BfmI CTRYAG 1 cut(s) 1197
BfrI CTTAAG 1 cut(s) 1213
BisI GCNGC 5 cut(s) 663, 1143, 1387, 1390, 1455
BlsI GCNGC 5 cut(s) 664, 1144, 1388, 1391, 1456
BmcAI AGTACT 1 cut(s) 910
Bme1390I CCNGG 1 cut(s) 1548
Bme18I GGWCC 2 cut(s) 883, 1250
BmgT120I GGNCC 3 cut(s) 883, 928, 1250
BmiI GGNNCC 1 cut(s) 1479
BmrFI CCNGG 1 cut(s) 1548
BmsI GCATC 2 cut(s) 1075, 1088
BpiI GAAGAC 1 cut(s) 816
BpmI CTGGAG 5 cut(s) 102, 177, 255, 324, 1323
BpuMI CCSGG 1 cut(s) 1548
BsaBI GATNNNNATC 1 cut(s) 1185
BsaWI WCCGGW 2 cut(s) 762, 1252
BsaXI ACNNNNNCTCC 2 cut(s) 1296, 1326
Bsc4I CCNNNNNNNGG 3 cut(s) 718, 769, 926
Bse1I ACTGG 5 cut(s) 194, 272, 896, 1252, 1306
Bse21I CCTNAGG 3 cut(s) 573, 849, 1482
Bse8I GATNNNNATC 1 cut(s) 1185
BseAI TCCGGA 1 cut(s) 1252
BseGI GGATG 8 cut(s) 25, 161, 236, 583, 745, 985, 1488, 1499
BseJI GATNNNNATC 1 cut(s) 1185
BseLI CCNNNNNNNGG 3 cut(s) 718, 769, 926
BseMII CTCAG 4 cut(s) 564, 840, 906, 1473
BseNI ACTGG 5 cut(s) 194, 272, 896, 1252, 1306
BseRI GAGGAG 1 cut(s) 460
BseSI GKGCMC 1 cut(s) 437
BseXI GCAGC 4 cut(s) 1129, 1373, 1376, 1441
BseYI CCCAGC 5 cut(s) 166, 211, 241, 289, 463
BsgI GTGCAG 1 cut(s) 1128
Bsh1236I CGCG 1 cut(s) 960
BshFI GGCC 1 cut(s) 930
BshNI GGYRCC 1 cut(s) 1477
BsiSI CCGG 3 cut(s) 763, 1253, 1547
BslFI GGGAC 1 cut(s) 890
BslI CCNNNNNNNGG 3 cut(s) 718, 769, 926
BsmFI GGGAC 1 cut(s) 890
BsmI GAATGC 3 cut(s) 1134, 1359, 1457
BsnI GGCC 1 cut(s) 930
Bsp1286I GDGCHC 4 cut(s) 437, 921, 1060, 1229
Bsp13I TCCGGA 1 cut(s) 1252
Bsp143I GATC 5 cut(s) 547, 591, 838, 1180, 1186
BspACI CCGC 3 cut(s) 36, 663, 1495
BspANI GGCC 1 cut(s) 930
BspCNI CTCAG 4 cut(s) 565, 841, 907, 1474
BspEI TCCGGA 1 cut(s) 1252
BspFNI CGCG 1 cut(s) 960
BspHI TCATGA 1 cut(s) 1576
BspLI GGNNCC 1 cut(s) 1479
BspMAI CTGCAG 1 cut(s) 1201
BspPI GGATC 1 cut(s) 555
BspT107I GGYRCC 1 cut(s) 1477
BspTI CTTAAG 1 cut(s) 1213
BsrBI CCGCTC 2 cut(s) 665, 1497
BsrI ACTGG 5 cut(s) 194, 272, 896, 1252, 1306
BssMI GATC 5 cut(s) 547, 591, 838, 1180, 1186
BssNAI GTATAC 1 cut(s) 1327
BssSI CACGAG 1 cut(s) 1125
Bst1107I GTATAC 1 cut(s) 1327
Bst2BI CACGAG 1 cut(s) 1125
Bst4CI ACNGT 2 cut(s) 1118, 1259
Bst6I CTCTTC 4 cut(s) 478, 512, 537, 1112
BstAFI CTTAAG 1 cut(s) 1213
BstAPI GCANNNNNTGC 1 cut(s) 1085
BstC8I GCNNGC 1 cut(s) 1132
BstDEI CTNAG 5 cut(s) 225, 573, 849, 915, 1482
BstENI CCTNNNNNAGG 1 cut(s) 716
BstF5I GGATG 8 cut(s) 25, 161, 236, 583, 745, 985, 1488, 1499
BstFNI CGCG 1 cut(s) 960
BstHHI GCGC 2 cut(s) 610, 1375
BstKTI GATC 5 cut(s) 550, 594, 841, 1183, 1189
BstMBI GATC 5 cut(s) 547, 591, 838, 1180, 1186
BstMWI GCNNNNNNNGC 4 cut(s) 1064, 1085, 1148, 1454
BstNSI RCATGY 1 cut(s) 219
BstSCI CCNGG 1 cut(s) 1546
BstSFI CTRYAG 1 cut(s) 1197
BstSLI GKGCMC 1 cut(s) 437
BstUI CGCG 1 cut(s) 960
BstV1I GCAGC 4 cut(s) 1129, 1373, 1376, 1441
BstV2I GAAGAC 1 cut(s) 816
BstXI CCANNNNNNTGG 1 cut(s) 512
BstZ17I GTATAC 1 cut(s) 1327
Bsu36I CCTNAGG 3 cut(s) 573, 849, 1482
BsuRI GGCC 1 cut(s) 930
BtsCI GGATG 8 cut(s) 25, 161, 236, 583, 745, 985, 1488, 1499
BtsIMutI CAGTG 1 cut(s) 903
Cac8I GCNNGC 1 cut(s) 1132
CaiI CAGNNNCTG 1 cut(s) 1389
CciI TCATGA 1 cut(s) 1576
CfoI GCGC 2 cut(s) 610, 1375
Cfr13I GGNCC 3 cut(s) 883, 928, 1250
Csp6I GTAC 2 cut(s) 909, 1478
CviAII CATG 4 cut(s) 216, 360, 1064, 1577
CviQI GTAC 2 cut(s) 909, 1478
DdeI CTNAG 5 cut(s) 225, 573, 849, 915, 1482
DpnI GATC 5 cut(s) 549, 593, 840, 1182, 1188
DpnII GATC 5 cut(s) 547, 591, 838, 1180, 1186
Eam1104I CTCTTC 4 cut(s) 478, 512, 537, 1112
EarI CTCTTC 4 cut(s) 478, 512, 537, 1112
Eco24I GRGCYC 3 cut(s) 921, 1060, 1229
Eco32I GATATC 1 cut(s) 1021
Eco47I GGWCC 2 cut(s) 883, 1250
Eco57I CTGAAG 1 cut(s) 699
Eco81I CCTNAGG 3 cut(s) 573, 849, 1482
EcoNI CCTNNNNNAGG 1 cut(s) 716
EcoO109I RGGNCCY 1 cut(s) 928
EcoRV GATATC 1 cut(s) 1021
EcoT38I GRGCYC 3 cut(s) 921, 1060, 1229
FaeI CATG 4 cut(s) 219, 363, 1067, 1580
FalI AAGNNNNNCTT 4 cut(s) 641, 673, 1276, 1308
FaqI GGGAC 1 cut(s) 890
FatI CATG 4 cut(s) 215, 359, 1063, 1576
FbaI TGATCA 2 cut(s) 591, 1180
FblI GTMKAC 2 cut(s) 1326, 1433
Fnu4HI GCNGC 5 cut(s) 663, 1143, 1387, 1390, 1455
FokI GGATG 8 cut(s) 12, 148, 223, 590, 752, 992, 1475, 1486
FriOI GRGCYC 3 cut(s) 921, 1060, 1229
Fsp4HI GCNGC 5 cut(s) 663, 1143, 1387, 1390, 1455
GlaI GCGC 2 cut(s) 609, 1374
GluI GCNGC 5 cut(s) 663, 1143, 1387, 1390, 1455
GsaI CCCAGC 5 cut(s) 170, 215, 245, 293, 467
GsuI CTGGAG 5 cut(s) 102, 177, 255, 324, 1323
HaeIII GGCC 1 cut(s) 930
HapII CCGG 3 cut(s) 763, 1253, 1547
HhaI GCGC 2 cut(s) 610, 1375
Hin1II CATG 4 cut(s) 219, 363, 1067, 1580
Hin6I GCGC 2 cut(s) 608, 1373
HinP1I GCGC 2 cut(s) 608, 1373
HincII GTYRAC 2 cut(s) 500, 1434
HindII GTYRAC 2 cut(s) 500, 1434
HindIII AAGCTT 2 cut(s) 1175, 1408
HinfI GANTC 7 cut(s) 41, 878, 1121, 1219, 1423, 1430, 1514
HpaII CCGG 3 cut(s) 763, 1253, 1547
HphI GGTGA 5 cut(s) 1221, 1338, 1426, 1432, 1571
Hpy166II GTNNAC 3 cut(s) 500, 1327, 1434
Hpy188I TCNGA 7 cut(s) 621, 679, 792, 1084, 1205, 1341, 1463
Hpy188III TCNNGA 9 cut(s) 572, 595, 848, 1125, 1184, 1253, 1296, 1427, 1577
Hpy8I GTNNAC 3 cut(s) 500, 1327, 1434
HpyCH4III ACNGT 2 cut(s) 1118, 1259
HpyCH4IV ACGT 1 cut(s) 1192
HpyCH4V TGCA 8 cut(s) 890, 1067, 1079, 1145, 1199, 1277, 1457, 1535
HpyF10VI GCNNNNNNNGC 4 cut(s) 1064, 1085, 1148, 1454
HpyF3I CTNAG 5 cut(s) 225, 573, 849, 915, 1482
HpySE526I ACGT 1 cut(s) 1192
Hsp92II CATG 4 cut(s) 219, 363, 1067, 1580
HspAI GCGC 2 cut(s) 608, 1373
Kpn2I TCCGGA 1 cut(s) 1252
KpnI GGTACC 1 cut(s) 1481
Ksp22I TGATCA 2 cut(s) 591, 1180
Kzo9I GATC 5 cut(s) 547, 591, 838, 1180, 1186
LmnI GCTCC 1 cut(s) 951
Lsp1109I GCAGC 4 cut(s) 1129, 1373, 1376, 1441
LweI GCATC 2 cut(s) 1075, 1088
MaeII ACGT 1 cut(s) 1192
MaeIII GTNAC 3 cut(s) 724, 1118, 1243
MalI GATC 5 cut(s) 549, 593, 840, 1182, 1188
MbiI CCGCTC 2 cut(s) 665, 1497
MboI GATC 5 cut(s) 547, 591, 838, 1180, 1186
MhlI GDGCHC 4 cut(s) 437, 921, 1060, 1229
MluCI AATT 7 cut(s) 13, 551, 603, 622, 750, 971, 1331
MlyI GAGTC 4 cut(s) 872, 1115, 1439, 1523
MmeI TCCRAC 4 cut(s) 53, 717, 1029, 1319
MroI TCCGGA 1 cut(s) 1252
MseI TTAA 4 cut(s) 447, 924, 1214, 1283
MspA1I CMGCKG 1 cut(s) 1386
MspCI CTTAAG 1 cut(s) 1213
MspI CCGG 3 cut(s) 763, 1253, 1547
MspR9I CCNGG 1 cut(s) 1548
Mva1269I GAATGC 3 cut(s) 1134, 1359, 1457
MvnI CGCG 1 cut(s) 960
MwoI GCNNNNNNNGC 4 cut(s) 1064, 1085, 1148, 1454
NciI CCSGG 1 cut(s) 1548
NdeII GATC 5 cut(s) 547, 591, 838, 1180, 1186
NlaIII CATG 4 cut(s) 219, 363, 1067, 1580
NlaIV GGNNCC 1 cut(s) 1479
NmuCI GTSAC 2 cut(s) 724, 1118
NspI RCATGY 1 cut(s) 219
PagI TCATGA 1 cut(s) 1576
PctI GAATGC 3 cut(s) 1134, 1359, 1457
PfeI GAWTC 3 cut(s) 41, 1219, 1423
PflFI GACNNNGTC 1 cut(s) 881
PfoI TCCNGGA 1 cut(s) 1546
PkrI GCNGC 5 cut(s) 664, 1144, 1388, 1391, 1456
PleI GAGTC 4 cut(s) 872, 1115, 1438, 1522
PpsI GAGTC 4 cut(s) 872, 1115, 1438, 1522
PsiI TTATAA 2 cut(s) 756, 783
Psp1406I AACGTT 1 cut(s) 1192
PspFI CCCAGC 5 cut(s) 166, 211, 241, 289, 463
PspN4I GGNNCC 1 cut(s) 1479
PspPI GGNCC 3 cut(s) 883, 928, 1250
PstI CTGCAG 1 cut(s) 1201
PstNI CAGNNNCTG 1 cut(s) 1389
PsyI GACNNNGTC 1 cut(s) 881
PvuII CAGCTG 1 cut(s) 1386
RsaI GTAC 2 cut(s) 910, 1479
RsaNI GTAC 2 cut(s) 909, 1478
SalI GTCGAC 1 cut(s) 1432
SaqAI TTAA 4 cut(s) 447, 924, 1214, 1283
SatI GCNGC 5 cut(s) 663, 1143, 1387, 1390, 1455
Sau3AI GATC 5 cut(s) 547, 591, 838, 1180, 1186
Sau96I GGNCC 3 cut(s) 883, 928, 1250
ScaI AGTACT 1 cut(s) 910
SchI GAGTC 4 cut(s) 872, 1115, 1439, 1523
ScrFI CCNGG 1 cut(s) 1548
SduI GDGCHC 4 cut(s) 437, 921, 1060, 1229
SfaNI GCATC 2 cut(s) 1075, 1088
SfcI CTRYAG 1 cut(s) 1197
SinI GGWCC 2 cut(s) 883, 1250
SmlI CTYRAG 1 cut(s) 1213
SmoI CTYRAG 1 cut(s) 1213
Sse9I AATT 7 cut(s) 13, 551, 603, 622, 750, 971, 1331
SsiI CCGC 3 cut(s) 36, 663, 1495
StyD4I CCNGG 1 cut(s) 1546
TaaI ACNGT 2 cut(s) 1118, 1259
TaiI ACGT 1 cut(s) 1195
TaqI TCGA 2 cut(s) 582, 1433
TaqII GACCGA 1 cut(s) 871
TasI AATT 7 cut(s) 13, 551, 603, 622, 750, 971, 1331
TatI WGTACW 1 cut(s) 908
TauI GCSGC 1 cut(s) 665
TfiI GAWTC 3 cut(s) 41, 1219, 1423
Tru1I TTAA 4 cut(s) 447, 924, 1214, 1283
Tru9I TTAA 4 cut(s) 447, 924, 1214, 1283
TscAI CASTG 1 cut(s) 903
TseFI GTSAC 2 cut(s) 724, 1118
TseI GCWGC 4 cut(s) 1142, 1386, 1389, 1454
Tsp45I GTSAC 2 cut(s) 724, 1118
TspRI CASTG 1 cut(s) 903
Tth111I GACNNNGTC 1 cut(s) 881
Vha464I CTTAAG 1 cut(s) 1213
VpaK11BI GGWCC 2 cut(s) 883, 1250
XagI CCTNNNNNAGG 1 cut(s) 716
XapI RAATTY 1 cut(s) 971
XceI RCATGY 1 cut(s) 219
XmiI GTMKAC 2 cut(s) 1326, 1433
ZrmI AGTACT 1 cut(s) 910
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.