Rh1AG030900

RNA helicase SDE3

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1A
OG0000595
Physical Location & Seq
Reverse (-)
5586370 .. 5588983
2614 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1AG030900.1

Sequence Viewer

Length: 1911 bp
ATGATGAGGTTGGGGATAATCATTGGGGCTTCAGCAATATTATTGTGGGAATACTTTGAAAATAAGAGACCCACACCATCATCATCATCCCCTGAAACGCCACCTCAGCGGCAGCCAACGTCATCTAATTCTAAACCACATCCAGCCTCCGCAGAACCCCCACCATATTCTTCTAAACCACCTTCATCTCCAGCTTCTTCTAAACCACCTTCATCCCCAGCTTCTTCTAAACCACCTTCATCTGCAGCTTCCCCACAACCCCCAGCATATTCTTCTAAACCACCTGCATCCCCAGCATGTTCTTCTAAACCACCTTCATCTCCAGTTTCCCCACAACCCCCAGCATATTCTTCTAAACCATCTTCATCTCCATCTTCCCCAAAACACCCTCCAACACATTTTTCAATACCATCTCCATCTCCACCTCCATCTCCCCCAAAGTGCCCCCCTGTCTTTAAGTCAGTTCTACGCCCAGCCTCCTCTTCCTCAAATAATGATGATATAAGTCAAAACCAACAATATGGGAAGAGAACAGCTTATGTGTGTGTTGAAGAGGATCCATTACCTGTATTCATGATTCCTGAGGATGTCGAAGCCTTGATCAAGAAAGAAATTGCGCCCAAAGTTCTGAATCGCCCATTATCTCCCACAACATACAAGGACTACTTTGCCGCTCTCTTATATTCTGAAGATTTCTACTTGGAGAAATGGAGTGATTTCCTTTTGAAGGGTGTGACATTAGCGTTGGATGAAAGTCCAATTTATAAAAACCGGAAAAAGGAAGCACTTTATAAAAATCGGAAAAAGGAAGATAAGGAAGACAAAACCTTTGTAGCATTTGAGCTTGATCGTGTTCCTGAGGAACGACCATTCCTCTTGTCAAGGGACTTGGTCCTTGCACGACCAGTGGGGAAGAGTTCTACTGAGCCCTTTAAGGGCCCCATCCATAAAGTTGTTGGGAGCAATCGCGTTTTGGTTGAATTTGAGGATGGCTTTTATTCTTATCATCATTCCAACAAAAAATATGATATCAGCTTCTCATACAATAGAGTTTGTTTGAAAAGAGCCCACCATGCAGTAAAAGCTGCATCAGATGCCTTGTTTCAGAACTTCCTCTTCCCTGACTGTGACTCACGAGCAAGCATTCCTGCTGCACCAGCTCTGCTTTCTACTACCTATCATAAGCTAGATCAAGAGCAACGTTCTGCAGTCGGACATATCTTAAGGATTCAGGGCTCACCACCTTATGTAGTAACTGGTCCAGACTGTGAAGGCAAATCTTTTGCAAATTTAAGAGAACCTTCAAGAACTGGAGTGGTTGTTAGTGAAGCAGTATACCAATTATGTCGGAAGTCACCAGAGTATCGCATTCTTATCTGTGCACCTACTAACAGCTGCTGTGATATGCTGATGAGAAGCTTGGTGAAGGTGATTCCAGAGTCTACTATGTTTCGTGCCAATGCTGCATTCCGAGACAGAGATGAGGTACCTGAGGACATCCTCCATTTATCCCTTTACAAAGAGTCTGGTTTTTCTTGTCCTGCAATAGAGAAACTCCGGGAATACAAGGTGATTTTCTCAACTTTCATGAGTAGCTTCCGACTACATGATAAAGGCATAGCTGCTGGACATTTTAGCCACATTTTTCTGGTGGATGCTTCATCTGCTATTGAACCGGAAACATTGGTCGCCCTGACTAACTTTGCTGTCAAGGCCACTAGTGTTATAGTTACTGGTAATCATGGAAATAGTCCGCTCTGGGTTCGCGCTGACATTGCAAGGAAAAAGGGACTCAAGATTTCATACTTTGAACGACTCTGCAAGCTCAGGCCATATAGAAGCCCCAGTCCAATGTTCATCACACAACTAGACCTGAACCAAAAGTCAGAGTACCAAACAAGACCTTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

636

Amino Acids

70.54

Weight (kDa)

9.19

Isoelectric Point (pI)

67.89

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
MOV-10_beta-barrel PF21634 270 - 346 3.4e-09 Helicase MOV-10, beta-barrel domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000595)

Species Orthologous Gene IDs
fragaria_vesca FvH4_4g37100 FvH4_4g37100 FvH4_4g37100
malus_domestica MD13G1238300.v1.1 MD16G1243100.v1.1 MD16G1243200.v1.1
prunus_persica Prupe.1G070100_v2.0.a1 Prupe.1G070200_v2.0.a1 Prupe.1G070300_v2.0.a1 Prupe.1G070300_v2.0.a1
pyrus_communis pycom13g21070 pycom16g20390 pycom16g20400
rosa_chinensis RchiOBHm_Chr1g0318071 RchiOBHm_Chr1g0318111 RchiOBHm_Chr4g0446861 RchiOBHm_Chr4g0446881 RchiOBHm_Chr4g0446891
rosa_laevigata RLG00000005623 RLG00000005624 RLG00000009337 RLG00000030560 RLG00000030566
rosa_multiflora Rmu_co8177450.1_g000001 Rmu_sc0001753.1_g000012 Rmu_sc0001753.1_g000013 Rmu_sc0001753.1_g000014 Rmu_sc0001753.1_g000015 Rmu_sc0011424.1_g000009 Rmu_sc0011424.1_g000020 Rmu_sc0034555.1_g000001 Rmu_ssc0000008.1_g000002
rosa_roxburghii Rroxscaffold_4G00329530 Rroxscaffold_4G00329590 Rroxscaffold_4G00329800 Rroxscaffold_4G00329810 Rroxscaffold_4G00329860 Rroxscaffold_4G00329910 Rroxscaffold_4G00330030 Rroxscaffold_5G00343610 Rroxscaffold_5G00348280 Rroxscaffold_5G00387220 Rroxscaffold_5G00387230
rosa_rugosa Rorug01G0019100 Rorug01G0019100 Rorug01G0019500 Rorug01G0019600 Rorug04G0010100 Rorug04G0375200 Rorug04G0375300 Rorug04G0375400 Rorug04G0375500 Rorug04G0375600 Rorug04G0375700
rosa_samantha Rh1AG030700 Rh1AG030900 Rh1BG026900 Rh1CG029500 Rh1CG029700 Rh1DG040500 Rh4AG088100 Rh4AG436700 Rh4AG436800 Rh4AG436900 Rh4BG084700 Rh4BG445800 Rh4BG445900 Rh4BG446100 Rh4CG096300 Rh4CG463100 Rh4CG463200 Rh4CG463400 Rh4DG444500 Rh4DG444600 Rh4DG444700
rosa_wichuraiana Rw1G002420 Rw1G002440 Rw1G002480 Rw4G037360 Rw4G037370 Rw4G037380

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 765, 792
AarI CACCTGC 1 cut(s) 292
Acc36I ACCTGC 1 cut(s) 292
Acc65I GGTACC 1 cut(s) 1486
AccB1I GGYRCC 1 cut(s) 1486
AccBSI CCGCTC 2 cut(s) 674, 1756
AccI GTMKAC 2 cut(s) 1335, 1442
AccII CGCG 2 cut(s) 969, 1767
AciI CCGC 4 cut(s) 109, 150, 672, 1754
AclI AACGTT 1 cut(s) 1201
AclWI GGATC 2 cut(s) 551, 564
AcsI RAATTY 2 cut(s) 980, 1288
AcuI CTGAAG 2 cut(s) 15, 708
AfaI GTAC 2 cut(s) 1488, 1892
AfiI CCNNNNNNNGG 3 cut(s) 727, 778, 935
AflII CTTAAG 1 cut(s) 1222
AgsI TTSAA 9 cut(s) 59, 405, 551, 727, 980, 1060, 1305, 1673, 1811
AhlI ACTAGT 1 cut(s) 1718
AjuI GAANNNNNNNTTGG 4 cut(s) 385, 417, 1451, 1483
AloI GAACNNNNNNTCC 2 cut(s) 855, 887
Alw21I GWGCWC 1 cut(s) 1384
Alw26I GTCTC 2 cut(s) 61, 1467
Alw44I GTGCAC 1 cut(s) 1380
AlwI GGATC 2 cut(s) 551, 564
AlwNI CAGNNNCTG 1 cut(s) 1398
AoxI GGCC 3 cut(s) 937, 1713, 1829
ApaI GGGCCC 1 cut(s) 941
ApaLI GTGCAC 1 cut(s) 1380
ApeKI GCWGC 7 cut(s) 112, 245, 1085, 1151, 1395, 1463, 1622
ApoI RAATTY 2 cut(s) 980, 1288
ArsI GACNNNNNNTTYG 2 cut(s) 812, 844
Asp718I GGTACC 1 cut(s) 1486
AspLEI GCGC 2 cut(s) 619, 1769
AspS9I GGNCC 4 cut(s) 892, 937, 938, 1259
AsuC2I CCSGG 1 cut(s) 1559
AsuHPI GGTGA 5 cut(s) 1230, 1347, 1435, 1441, 1582
AvaII GGWCC 2 cut(s) 892, 1259
AxyI CCTNAGG 3 cut(s) 582, 858, 1491
BaeGI GKGCMC 3 cut(s) 446, 941, 1384
BaeI ACNNNNGTAYC 2 cut(s) 1346, 1379
BamHI GGATCC 1 cut(s) 556
BanI GGYRCC 1 cut(s) 1486
BanII GRGCYC 4 cut(s) 930, 941, 1069, 1238
BauI CACGAG 1 cut(s) 1134
BbsI GAAGAC 1 cut(s) 825
Bbv12I GWGCWC 1 cut(s) 1384
BbvCI CCTCAGC 1 cut(s) 105
BbvI GCAGC 7 cut(s) 124, 257, 1072, 1138, 1382, 1450, 1609
BccI CCATC 8 cut(s) 85, 367, 379, 418, 424, 436, 950, 983
BclI TGATCA 1 cut(s) 600
BcnI CCSGG 1 cut(s) 1559
BcoDI GTCTC 2 cut(s) 61, 1467
BcuI ACTAGT 1 cut(s) 1718
BfaI CTAG 3 cut(s) 1187, 1719, 1868
BfmI CTRYAG 2 cut(s) 243, 1206
BfrI CTTAAG 1 cut(s) 1222
BfuAI ACCTGC 1 cut(s) 292
BisI GCNGC 9 cut(s) 110, 113, 246, 672, 1086, 1152, 1396, 1464, 1623
BlsI GCNGC 9 cut(s) 111, 114, 247, 673, 1087, 1153, 1397, 1465, 1624
Bme1390I CCNGG 1 cut(s) 1559
Bme18I GGWCC 2 cut(s) 892, 1259
BmgT120I GGNCC 4 cut(s) 892, 937, 938, 1259
BmiI GGNNCC 4 cut(s) 558, 939, 940, 1488
BmrFI CCNGG 1 cut(s) 1559
BmrI ACTGGG 1 cut(s) 1839
BmsI GCATC 4 cut(s) 296, 1084, 1097, 1645
BmuI ACTGGG 1 cut(s) 1839
BpiI GAAGAC 1 cut(s) 825
BpmI CTGGAG 3 cut(s) 174, 306, 1332
Bpu10I CCTNAGC 2 cut(s) 105, 1826
BpuEI CTTGAG 1 cut(s) 1778
BpuMI CCSGG 1 cut(s) 1559
BsaI GGTCTC 1 cut(s) 61
BsaWI WCCGGW 2 cut(s) 771, 1675
BsaXI ACNNNNNCTCC 2 cut(s) 1305, 1335
Bsc4I CCNNNNNNNGG 3 cut(s) 727, 778, 935
Bse1I ACTGG 6 cut(s) 323, 905, 1261, 1315, 1738, 1845
Bse21I CCTNAGG 3 cut(s) 582, 858, 1491
Bse3DI GCAATG 1 cut(s) 1773
BseLI CCNNNNNNNGG 3 cut(s) 727, 778, 935
BseMI GCAATG 1 cut(s) 1773
BseMII CTCAG 6 cut(s) 119, 573, 849, 915, 1482, 1840
BseNI ACTGG 6 cut(s) 323, 905, 1261, 1315, 1738, 1845
BseRI GAGGAG 1 cut(s) 469
BseSI GKGCMC 3 cut(s) 446, 941, 1384
BseXI GCAGC 7 cut(s) 124, 257, 1072, 1138, 1382, 1450, 1609
BseYI CCCAGC 5 cut(s) 217, 262, 292, 340, 472
BsgI GTGCAG 1 cut(s) 1137
Bsh1236I CGCG 2 cut(s) 969, 1767
BshFI GGCC 3 cut(s) 939, 1715, 1831
BshNI GGYRCC 1 cut(s) 1486
BsiHKAI GWGCWC 1 cut(s) 1384
BsiSI CCGG 3 cut(s) 772, 1558, 1676
BslFI GGGAC 2 cut(s) 899, 1803
BslI CCNNNNNNNGG 3 cut(s) 727, 778, 935
BsmAI GTCTC 2 cut(s) 61, 1467
BsmFI GGGAC 2 cut(s) 899, 1803
BsmI GAATGC 3 cut(s) 1143, 1368, 1466
BsnI GGCC 3 cut(s) 939, 1715, 1831
Bso31I GGTCTC 1 cut(s) 61
Bsp120I GGGCCC 1 cut(s) 937
Bsp1286I GDGCHC 6 cut(s) 446, 930, 941, 1069, 1238, 1384
Bsp143I GATC 4 cut(s) 556, 600, 847, 1189
BspACI CCGC 4 cut(s) 109, 150, 672, 1754
BspANI GGCC 3 cut(s) 939, 1715, 1831
BspCNI CTCAG 6 cut(s) 118, 574, 850, 916, 1483, 1839
BspFNI CGCG 2 cut(s) 969, 1767
BspHI TCATGA 2 cut(s) 573, 1587
BspLI GGNNCC 4 cut(s) 558, 939, 940, 1488
BspMAI CTGCAG 2 cut(s) 247, 1210
BspMI ACCTGC 1 cut(s) 292
BspPI GGATC 2 cut(s) 551, 564
BspT107I GGYRCC 1 cut(s) 1486
BspTI CTTAAG 1 cut(s) 1222
BspTNI GGTCTC 1 cut(s) 61
BsrBI CCGCTC 2 cut(s) 674, 1756
BsrDI GCAATG 1 cut(s) 1773
BsrI ACTGG 6 cut(s) 323, 905, 1261, 1315, 1738, 1845
BssMI GATC 4 cut(s) 556, 600, 847, 1189
BssNAI GTATAC 1 cut(s) 1336
BssSI CACGAG 1 cut(s) 1134
Bst1107I GTATAC 1 cut(s) 1336
Bst2BI CACGAG 1 cut(s) 1134
Bst4CI ACNGT 2 cut(s) 1127, 1268
Bst6I CTCTTC 5 cut(s) 487, 521, 546, 908, 1121
BstAFI CTTAAG 1 cut(s) 1222
BstAPI GCANNNNNTGC 1 cut(s) 1094
BstC8I GCNNGC 2 cut(s) 1141, 1823
BstDEI CTNAG 6 cut(s) 105, 582, 858, 924, 1491, 1826
BstENI CCTNNNNNAGG 1 cut(s) 725
BstFNI CGCG 2 cut(s) 969, 1767
BstHHI GCGC 2 cut(s) 619, 1769
BstKTI GATC 4 cut(s) 559, 603, 850, 1192
BstMAI GTCTC 2 cut(s) 61, 1467
BstMBI GATC 4 cut(s) 556, 600, 847, 1189
BstNSI RCATGY 1 cut(s) 300
BstSCI CCNGG 1 cut(s) 1557
BstSFI CTRYAG 2 cut(s) 243, 1206
BstSLI GKGCMC 3 cut(s) 446, 941, 1384
BstUI CGCG 2 cut(s) 969, 1767
BstV1I GCAGC 7 cut(s) 124, 257, 1072, 1138, 1382, 1450, 1609
BstV2I GAAGAC 1 cut(s) 825
BstX2I RGATCY 1 cut(s) 556
BstXI CCANNNNNNTGG 1 cut(s) 521
BstYI RGATCY 1 cut(s) 556
BstZ17I GTATAC 1 cut(s) 1336
Bsu36I CCTNAGG 3 cut(s) 582, 858, 1491
BsuRI GGCC 3 cut(s) 939, 1715, 1831
BtsIMutI CAGTG 1 cut(s) 912
BveI ACCTGC 1 cut(s) 292
Cac8I GCNNGC 2 cut(s) 1141, 1823
CaiI CAGNNNCTG 1 cut(s) 1398
CciI TCATGA 2 cut(s) 573, 1587
CfoI GCGC 2 cut(s) 619, 1769
Cfr13I GGNCC 4 cut(s) 892, 937, 938, 1259
Csp6I GTAC 2 cut(s) 1487, 1891
CviAII CATG 6 cut(s) 297, 574, 1073, 1588, 1607, 1742
CviQI GTAC 2 cut(s) 1487, 1891
DdeI CTNAG 6 cut(s) 105, 582, 858, 924, 1491, 1826
DpnI GATC 4 cut(s) 558, 602, 849, 1191
DpnII GATC 4 cut(s) 556, 600, 847, 1189
Eam1104I CTCTTC 5 cut(s) 487, 521, 546, 908, 1121
EarI CTCTTC 5 cut(s) 487, 521, 546, 908, 1121
Eco24I GRGCYC 4 cut(s) 930, 941, 1069, 1238
Eco31I GGTCTC 1 cut(s) 61
Eco32I GATATC 1 cut(s) 1030
Eco47I GGWCC 2 cut(s) 892, 1259
Eco57I CTGAAG 2 cut(s) 15, 708
Eco81I CCTNAGG 3 cut(s) 582, 858, 1491
EcoNI CCTNNNNNAGG 1 cut(s) 725
EcoO109I RGGNCCY 2 cut(s) 937, 938
EcoRV GATATC 1 cut(s) 1030
EcoT38I GRGCYC 4 cut(s) 930, 941, 1069, 1238
FaeI CATG 6 cut(s) 300, 577, 1076, 1591, 1610, 1745
FalI AAGNNNNNCTT 4 cut(s) 650, 682, 1285, 1317
FaqI GGGAC 2 cut(s) 899, 1803
FatI CATG 6 cut(s) 296, 573, 1072, 1587, 1606, 1741
FbaI TGATCA 1 cut(s) 600
FblI GTMKAC 2 cut(s) 1335, 1442
Fnu4HI GCNGC 9 cut(s) 110, 113, 246, 672, 1086, 1152, 1396, 1464, 1623
FriOI GRGCYC 4 cut(s) 930, 941, 1069, 1238
Fsp4HI GCNGC 9 cut(s) 110, 113, 246, 672, 1086, 1152, 1396, 1464, 1623
FspBI CTAG 3 cut(s) 1187, 1719, 1868
GlaI GCGC 2 cut(s) 618, 1768
GluI GCNGC 9 cut(s) 110, 113, 246, 672, 1086, 1152, 1396, 1464, 1623
GsaI CCCAGC 5 cut(s) 221, 266, 296, 344, 476
GsuI CTGGAG 3 cut(s) 174, 306, 1332
HaeIII GGCC 3 cut(s) 939, 1715, 1831
HapII CCGG 3 cut(s) 772, 1558, 1676
HhaI GCGC 2 cut(s) 619, 1769
Hin1II CATG 6 cut(s) 300, 577, 1076, 1591, 1610, 1745
Hin6I GCGC 2 cut(s) 617, 1767
HinP1I GCGC 2 cut(s) 617, 1767
HindIII AAGCTT 1 cut(s) 1417
HinfI GANTC 9 cut(s) 577, 631, 1130, 1228, 1432, 1439, 1523, 1791, 1815
HpaII CCGG 3 cut(s) 772, 1558, 1676
HphI GGTGA 5 cut(s) 1230, 1347, 1435, 1441, 1582
Hpy166II GTNNAC 3 cut(s) 1336, 1382, 1443
Hpy8I GTNNAC 3 cut(s) 1336, 1382, 1443
HpyAV CCTTC 8 cut(s) 192, 219, 246, 324, 721, 1265, 1311, 1420
HpyCH4III ACNGT 2 cut(s) 1127, 1268
HpyCH4IV ACGT 2 cut(s) 119, 1201
HpyF3I CTNAG 6 cut(s) 105, 582, 858, 924, 1491, 1826
HpySE526I ACGT 2 cut(s) 119, 1201
Hsp92II CATG 6 cut(s) 300, 577, 1076, 1591, 1610, 1745
HspAI GCGC 2 cut(s) 617, 1767
KpnI GGTACC 1 cut(s) 1490
Ksp22I TGATCA 1 cut(s) 600
Kzo9I GATC 4 cut(s) 556, 600, 847, 1189
LmnI GCTCC 1 cut(s) 960
Lsp1109I GCAGC 7 cut(s) 124, 257, 1072, 1138, 1382, 1450, 1609
LweI GCATC 4 cut(s) 296, 1084, 1097, 1645
MaeI CTAG 3 cut(s) 1187, 1719, 1868
MaeII ACGT 2 cut(s) 119, 1201
MaeIII GTNAC 5 cut(s) 733, 1127, 1252, 1353, 1729
MalI GATC 4 cut(s) 558, 602, 849, 1191
MbiI CCGCTC 2 cut(s) 674, 1756
MboI GATC 4 cut(s) 556, 600, 847, 1189
MflI RGATCY 1 cut(s) 556
MhlI GDGCHC 6 cut(s) 446, 930, 941, 1069, 1238, 1384
MluCI AATT 6 cut(s) 127, 612, 759, 980, 1288, 1340
MlyI GAGTC 5 cut(s) 1124, 1448, 1532, 1785, 1809
MmeI TCCRAC 6 cut(s) 416, 726, 1038, 1192, 1328, 1624
MseI TTAA 4 cut(s) 456, 933, 1223, 1292
MspA1I CMGCKG 2 cut(s) 109, 1395
MspCI CTTAAG 1 cut(s) 1222
MspI CCGG 3 cut(s) 772, 1558, 1676
MspR9I CCNGG 1 cut(s) 1559
Mva1269I GAATGC 3 cut(s) 1143, 1368, 1466
MvnI CGCG 2 cut(s) 969, 1767
NciI CCSGG 1 cut(s) 1559
NdeII GATC 4 cut(s) 556, 600, 847, 1189
NlaIII CATG 6 cut(s) 300, 577, 1076, 1591, 1610, 1745
NlaIV GGNNCC 4 cut(s) 558, 939, 940, 1488
NmuCI GTSAC 3 cut(s) 733, 1127, 1353
NspI RCATGY 1 cut(s) 300
PagI TCATGA 2 cut(s) 573, 1587
PaqCI CACCTGC 1 cut(s) 292
PctI GAATGC 3 cut(s) 1143, 1368, 1466
PfeI GAWTC 4 cut(s) 577, 631, 1228, 1432
PflFI GACNNNGTC 1 cut(s) 890
PfoI TCCNGGA 1 cut(s) 1557
PkrI GCNGC 9 cut(s) 111, 114, 247, 673, 1087, 1153, 1397, 1465, 1624
PleI GAGTC 5 cut(s) 1124, 1447, 1531, 1785, 1809
PpsI GAGTC 5 cut(s) 1124, 1447, 1531, 1785, 1809
PsiI TTATAA 2 cut(s) 765, 792
Psp1406I AACGTT 1 cut(s) 1201
PspFI CCCAGC 5 cut(s) 217, 262, 292, 340, 472
PspN4I GGNNCC 4 cut(s) 558, 939, 940, 1488
PspOMI GGGCCC 1 cut(s) 937
PspPI GGNCC 4 cut(s) 892, 937, 938, 1259
PstI CTGCAG 2 cut(s) 247, 1210
PstNI CAGNNNCTG 1 cut(s) 1398
PsuI RGATCY 1 cut(s) 556
PsyI GACNNNGTC 1 cut(s) 890
PvuII CAGCTG 1 cut(s) 1395
RsaI GTAC 2 cut(s) 1488, 1892
RsaNI GTAC 2 cut(s) 1487, 1891
SaqAI TTAA 4 cut(s) 456, 933, 1223, 1292
SatI GCNGC 9 cut(s) 110, 113, 246, 672, 1086, 1152, 1396, 1464, 1623
Sau3AI GATC 4 cut(s) 556, 600, 847, 1189
Sau96I GGNCC 4 cut(s) 892, 937, 938, 1259
SchI GAGTC 5 cut(s) 1124, 1448, 1532, 1785, 1809
ScrFI CCNGG 1 cut(s) 1559
SduI GDGCHC 6 cut(s) 446, 930, 941, 1069, 1238, 1384
SfaNI GCATC 4 cut(s) 296, 1084, 1097, 1645
SfcI CTRYAG 2 cut(s) 243, 1206
SinI GGWCC 2 cut(s) 892, 1259
SmlI CTYRAG 2 cut(s) 1222, 1793
SmoI CTYRAG 2 cut(s) 1222, 1793
SpeI ACTAGT 1 cut(s) 1718
Sse9I AATT 6 cut(s) 127, 612, 759, 980, 1288, 1340
SsiI CCGC 4 cut(s) 109, 150, 672, 1754
SspI AATATT 1 cut(s) 39
SspMI CTAG 3 cut(s) 1187, 1719, 1868
StyD4I CCNGG 1 cut(s) 1557
TaaI ACNGT 2 cut(s) 1127, 1268
TaiI ACGT 2 cut(s) 122, 1204
TaqI TCGA 1 cut(s) 591
TasI AATT 6 cut(s) 127, 612, 759, 980, 1288, 1340
TauI GCSGC 2 cut(s) 112, 674
TfiI GAWTC 4 cut(s) 577, 631, 1228, 1432
Tru1I TTAA 4 cut(s) 456, 933, 1223, 1292
Tru9I TTAA 4 cut(s) 456, 933, 1223, 1292
TscAI CASTG 1 cut(s) 912
TseFI GTSAC 3 cut(s) 733, 1127, 1353
TseI GCWGC 7 cut(s) 112, 245, 1085, 1151, 1395, 1463, 1622
Tsp45I GTSAC 3 cut(s) 733, 1127, 1353
TspRI CASTG 1 cut(s) 912
Tth111I GACNNNGTC 1 cut(s) 890
Vha464I CTTAAG 1 cut(s) 1222
VneI GTGCAC 1 cut(s) 1380
VpaK11BI GGWCC 2 cut(s) 892, 1259
XagI CCTNNNNNAGG 1 cut(s) 725
XapI RAATTY 2 cut(s) 980, 1288
XceI RCATGY 1 cut(s) 300
XcmI CCANNNNNNNNNTGG 1 cut(s) 953
XmiI GTMKAC 2 cut(s) 1335, 1442
XspI CTAG 3 cut(s) 1187, 1719, 1868
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.