Rmu_sc0000166.1_g000047

UDP-rhamnose rhamnosyltransferase 1

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000166.1
OG0000733
Physical Location & Seq
Reverse (-)
252781 .. 260356
7576 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000166.1_g000047.1.cds

Sequence Viewer

Length: 2382 bp
atggcaaaagagcttcatgttgtaatgctcccgtggtctgcctttggccatatgatgcccttctttcaactctccatagccttggccaaagccaaagttcatgtctcctacatagccaccccaagaaacattcaaaggctccccaaaatctcacctgatttgcaacctttcatacacctagtccccattccatttcctcctttagaacctgacttcttgcctgaaggagccgaggccactgtcgatgtgcccttcgaaaaaatcaacaacttacagatcgcgtatgatcttctccagaaacccatcaagcaattcattgcagatcaaatgcctgactgtatagtacccgatttcgctgcttattgggtagtggacattgccaaagagtatggtgttccactagtctacttctctgctttctctgcagctagcagtgtattctttgggcccttggaaaatctctccggtgtgaacagaaactacgctcttccgtcaccccaaagcttgacatctccaccagaatggatcacttttccttctttggtggcattcaaggagtatgaagcaatttatgtgccccaagggttttggggtaaaaatagtactgggattagtggtgcttcaaggcttgccaaggttatatcagcaagtcaagctttggcaattcgtacctgtaatgagattgaaggagactacttggaagtgtacaagaaaattactggaaagccagtgattcccattggtgtgcttcctccggagaaacctgggaaaagggaaaatacggaaatgagccctgatgggtttatgtttgattggctccataaacaaagccccaggtcagtggtgtttgtgggatttgggagtgagtgtaagctgagcaaagaacaagttcatgagatagctcatgggctggagctatcagaattgccgtttgtttggggagtcagaaaacccaatgcagctaacgatgatgaagttgatgattttctgcctttaggttttgttgacagaacatcagagaaagggcttgtttgctttggatgggtgcctcaaatggaaattttggggcacccatctgttgggggatctttgtttcactctggatggggttctgtgattgaaactctgcaatttgggcattgccttgtgttgttgcccatcattgttgatcagcctttgaatgcaaggcttttggtggagaagggtctggctgccgaagtgaagcgcaacgaagacgggtcgcttagtagagatgaaatagctaaaacactgaggctagcaatggtggaagatgaaggagagcacctgagaagcaatgcgaggaaagctgctgcagtttttggagatcacaagttgcaccaagaccactacatcggtgcgtttgttgattatctcaaaaataacgtcgcaaagaggcctgcccaccaatatggggatggacaaagttgggcttgggctaaggcttgggaccttcaaatcctagcaaccaccgacacccactttgaagctctcgatcccaggagcccagaaccgctggcagcatcaccggaaccggccggaaaagtaccgaaccggccctccaaagagagaaaaatatccattctcggttcaaaagcttccacgccgcccttctcagtaaaacttggtcatcatccccagattgaccccagactccaggaaccggaactatctctccagaaactagccaaaaggaaaagtaacctgaacaaatttgactttgctccattgggaacaactggctctgaatatcacaggtgggttcgtgatatccgccagcatctcaaggccgatggaatcttggatacaattctcgagattagccaagacgtgctaactgttgagcaagctcaagctttggaagcaaatagagcagccttagaggcaaataaggcgaaagctatcatcctaatgactagtcatatggatgattcgctccagtacgagtgtatgaatgaagaagaccccagaaggctgtgggtctcactcgaagatatatttggcaacgtccgtgactccctgcttcctgacctagaagtgagatggcatagcctccgcttctgtgatttaaagtcaattcttgactacaactcggaagcacttcgcattaaattcttagtggaattttttggtaaagagatcacaaatgcgatgttgattgagaagactctctctactttccccgtctctgcattgatggttgctaagaactatcgaatcgatgttactacaagacaaatcacaaggtttcatgagttcattagagctatgaatgtcactgaaaagcatgacatcatccttgtaaagaactataattcaagatcagtgggaacagagctcatttggacgttctggtccatataa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
UDPGT

Protein Analysis

793

Amino Acids

89.1

Weight (kDa)

5.98

Isoelectric Point (pI)

48.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 2371
AccB1I GGYRCC 2 cut(s) 1045, 1068
AccB7I CCANNNNNTGG 1 cut(s) 1079
AccI GTMKAC 1 cut(s) 405
AccII CGCG 1 cut(s) 281
AccIII TCCGGA 1 cut(s) 754
AciI CCGC 4 cut(s) 1532, 1625, 1792, 2074
AclWI GGATC 3 cut(s) 533, 1093, 1508
AcoI YGGCCR 3 cut(s) 46, 84, 1554
AcsI RAATTY 4 cut(s) 1059, 1730, 2129, 2141
AcuI CTGAAG 1 cut(s) 243
AfaI GTAC 6 cut(s) 345, 604, 670, 707, 1566, 1961
AfiI CCNNNNNNNGG 3 cut(s) 1079, 1432, 1681
AhlI ACTAGT 2 cut(s) 400, 1934
AjiI CACGTC 1 cut(s) 1849
AjnI CCWGG 4 cut(s) 763, 833, 1517, 1674
AjuI GAANNNNNNNTTGG 2 cut(s) 2001, 2033
AloI GAACNNNNNNTCC 4 cut(s) 1562, 1594, 1677, 1709
Alw21I GWGCWC 2 cut(s) 1305, 2358
Alw26I GTCTC 4 cut(s) 109, 684, 2005, 2209
AlwI GGATC 3 cut(s) 533, 1093, 1508
Ama87I CYCGRG 1 cut(s) 1832
Aor13HI TCCGGA 1 cut(s) 754
AoxI GGCC 8 cut(s) 46, 84, 234, 446, 1415, 1554, 1574, 1806
ApaI GGGCCC 1 cut(s) 450
ApeKI GCWGC 8 cut(s) 356, 425, 959, 1211, 1328, 1331, 1538, 1892
ApoI RAATTY 4 cut(s) 1059, 1730, 2129, 2141
ArsI GACNNNNNNTTYG 6 cut(s) 87, 119, 1389, 1421, 1484, 1516
Asp700I GAANNNNTTC 2 cut(s) 888, 2118
AspLEI GCGC 1 cut(s) 1227
AspS9I GGNCC 5 cut(s) 446, 447, 1468, 1575, 2373
AsuHPI GGTGA 3 cut(s) 144, 486, 1536
AsuII TTCGAA 1 cut(s) 255
AsuNHI GCTAGC 2 cut(s) 428, 1276
AvaI CYCGRG 1 cut(s) 1832
AvaII GGWCC 2 cut(s) 1468, 2373
BaeGI GKGCMC 4 cut(s) 252, 450, 579, 1071
BalI TGGCCA 2 cut(s) 48, 86
BanI GGYRCC 2 cut(s) 1045, 1068
BanII GRGCYC 4 cut(s) 450, 794, 1526, 2358
BbsI GAAGAC 3 cut(s) 1239, 1986, 2189
Bbv12I GWGCWC 2 cut(s) 1305, 2358
BbvI GCAGC 8 cut(s) 343, 437, 971, 1198, 1315, 1318, 1550, 1904
BceAI ACGGC 1 cut(s) 913
BcgI CGANNNNNNTGC 2 cut(s) 338, 372
BciT130I CCWGG 4 cut(s) 765, 835, 1519, 1676
BciVI GTATCC 1 cut(s) 1816
BclI TGATCA 1 cut(s) 1168
BcoDI GTCTC 4 cut(s) 109, 684, 2005, 2209
BcuI ACTAGT 2 cut(s) 400, 1934
BfaI CTAG 8 cut(s) 179, 401, 429, 1277, 1481, 1703, 1935, 2051
BfmI CTRYAG 2 cut(s) 423, 1332
BfuI GTATCC 1 cut(s) 1816
BglI GCCNNNNNGGC 1 cut(s) 1901
BisI GCNGC 9 cut(s) 357, 426, 960, 1212, 1329, 1332, 1539, 1625, 1893
BlpI GCTNAGC 1 cut(s) 875
BlsI GCNGC 9 cut(s) 358, 427, 961, 1213, 1330, 1333, 1540, 1626, 1894
BmcAI AGTACT 1 cut(s) 604
Bme1390I CCNGG 4 cut(s) 765, 835, 1519, 1676
Bme18I GGWCC 2 cut(s) 1468, 2373
BmeT110I CYCGRG 1 cut(s) 1832
BmgBI CACGTC 1 cut(s) 1849
BmgT120I GGNCC 5 cut(s) 446, 447, 1468, 1575, 2373
BmrFI CCNGG 4 cut(s) 765, 835, 1519, 1676
BmrI ACTGGG 1 cut(s) 615
BmsI GCATC 3 cut(s) 45, 1550, 1807
BmtI GCTAGC 2 cut(s) 432, 1280
BmuI ACTGGG 1 cut(s) 615
BpiI GAAGAC 3 cut(s) 1239, 1986, 2189
BpmI CTGGAG 5 cut(s) 278, 932, 1658, 1679, 1940
Bpu10I CCTNAGC 1 cut(s) 1458
Bpu1102I GCTNAGC 1 cut(s) 875
Bpu14I TTCGAA 1 cut(s) 255
BpuEI CTTGAG 2 cut(s) 1787, 1854
Bsa29I ATCGAT 1 cut(s) 2238
BsaI GGTCTC 1 cut(s) 2005
BsaJI CCNNGG 9 cut(s) 32, 81, 231, 450, 580, 633, 764, 833, 1517
BsaWI WCCGGW 4 cut(s) 464, 754, 1546, 1681
BsaXI ACNNNNNCTCC 6 cut(s) 853, 883, 1562, 1592, 1677, 1707
Bsc4I CCNNNNNNNGG 3 cut(s) 1079, 1432, 1681
Bse118I RCCGGY 2 cut(s) 1552, 1572
Bse1I ACTGG 5 cut(s) 610, 724, 728, 1762, 1957
Bse3DI GCAATG 5 cut(s) 315, 375, 1138, 1287, 1321
BseAI TCCGGA 1 cut(s) 754
BseBI CCWGG 4 cut(s) 765, 835, 1519, 1676
BseCI ATCGAT 1 cut(s) 2238
BseDI CCNNGG 9 cut(s) 32, 81, 231, 450, 580, 633, 764, 833, 1517
BseGI GGATG 7 cut(s) 1046, 1109, 1441, 1651, 1923, 1951, 2313
BseLI CCNNNNNNNGG 3 cut(s) 1079, 1432, 1681
BseMI GCAATG 5 cut(s) 315, 375, 1138, 1287, 1321
BseMII CTCAG 4 cut(s) 866, 1262, 1298, 1647
BseNI ACTGG 5 cut(s) 610, 724, 728, 1762, 1957
BseSI GKGCMC 4 cut(s) 252, 450, 579, 1071
BseX3I CGGCCG 1 cut(s) 1554
BseXI GCAGC 8 cut(s) 343, 437, 971, 1198, 1315, 1318, 1550, 1904
Bsh1236I CGCG 1 cut(s) 281
Bsh1285I CGRYCG 1 cut(s) 1557
BshFI GGCC 8 cut(s) 48, 86, 236, 448, 1417, 1556, 1576, 1808
BshNI GGYRCC 2 cut(s) 1045, 1068
BshVI ATCGAT 1 cut(s) 2238
BsiEI CGRYCG 1 cut(s) 1557
BsiHKAI GWGCWC 2 cut(s) 1305, 2358
BsiHKCI CYCGRG 1 cut(s) 1832
BsiSI CCGG 7 cut(s) 465, 755, 1547, 1553, 1557, 1573, 1682
BslFI GGGAC 2 cut(s) 167, 1481
BslI CCNNNNNNNGG 3 cut(s) 1079, 1432, 1681
BsmAI GTCTC 4 cut(s) 109, 684, 2005, 2209
BsmBI CGTCTC 1 cut(s) 2209
BsmFI GGGAC 2 cut(s) 167, 1481
BsmI GAATGC 2 cut(s) 548, 1186
BsnI GGCC 8 cut(s) 48, 86, 236, 448, 1417, 1556, 1576, 1808
Bso31I GGTCTC 1 cut(s) 2005
BsoBI CYCGRG 1 cut(s) 1832
Bsp119I TTCGAA 1 cut(s) 255
Bsp120I GGGCCC 1 cut(s) 446
Bsp1286I GDGCHC 8 cut(s) 252, 450, 579, 794, 1071, 1305, 1526, 2358
Bsp13I TCCGGA 1 cut(s) 754
Bsp1407I TGTACA 1 cut(s) 705
Bsp1720I GCTNAGC 1 cut(s) 875
BspACI CCGC 4 cut(s) 1532, 1625, 1792, 2074
BspANI GGCC 8 cut(s) 48, 86, 236, 448, 1417, 1556, 1576, 1808
BspCNI CTCAG 4 cut(s) 867, 1263, 1299, 1646
BspDI ATCGAT 1 cut(s) 2238
BspEI TCCGGA 1 cut(s) 754
BspFNI CGCG 1 cut(s) 281
BspHI TCATGA 2 cut(s) 892, 2269
BspMAI CTGCAG 2 cut(s) 427, 1336
BspOI GCTAGC 2 cut(s) 432, 1280
BspPI GGATC 3 cut(s) 533, 1093, 1508
BspQI GCTCTTC 1 cut(s) 492
BspT104I TTCGAA 1 cut(s) 255
BspT107I GGYRCC 2 cut(s) 1045, 1068
BspTNI GGTCTC 1 cut(s) 2005
BsrDI GCAATG 5 cut(s) 315, 375, 1138, 1287, 1321
BsrFI RCCGGY 2 cut(s) 1552, 1572
BsrGI TGTACA 1 cut(s) 705
BsrI ACTGG 5 cut(s) 610, 724, 728, 1762, 1957
BssAI RCCGGY 2 cut(s) 1552, 1572
BssECI CCNNGG 9 cut(s) 32, 81, 231, 450, 580, 633, 764, 833, 1517
BssT1I CCWWGG 4 cut(s) 81, 450, 580, 633
Bst2UI CCWGG 4 cut(s) 765, 835, 1519, 1676
Bst4CI ACNGT 3 cut(s) 241, 338, 1858
Bst6I CTCTTC 1 cut(s) 492
BstAUI TGTACA 1 cut(s) 705
BstBI TTCGAA 1 cut(s) 255
BstC8I GCNNGC 7 cut(s) 430, 630, 1278, 1419, 1536, 1796, 1866
BstDEI CTNAG 9 cut(s) 875, 1244, 1271, 1307, 1458, 1633, 1897, 2134, 2223
BstDSI CCRYGG 1 cut(s) 32
BstF5I GGATG 7 cut(s) 1046, 1109, 1441, 1651, 1923, 1951, 2313
BstFNI CGCG 1 cut(s) 281
BstHHI GCGC 1 cut(s) 1227
BstMAI GTCTC 4 cut(s) 109, 684, 2005, 2209
BstMCI CGRYCG 1 cut(s) 1557
BstMWI GCNNNNNNNGC 8 cut(s) 422, 653, 1135, 1325, 1880, 1889, 1901, 1910
BstNI CCWGG 4 cut(s) 765, 835, 1519, 1676
BstSCI CCNGG 4 cut(s) 763, 833, 1517, 1674
BstSFI CTRYAG 2 cut(s) 423, 1332
BstSLI GKGCMC 4 cut(s) 252, 450, 579, 1071
BstUI CGCG 1 cut(s) 281
BstV1I GCAGC 8 cut(s) 343, 437, 971, 1198, 1315, 1318, 1550, 1904
BstV2I GAAGAC 3 cut(s) 1239, 1986, 2189
BstX2I RGATCY 1 cut(s) 1085
BstXI CCANNNNNNTGG 4 cut(s) 82, 522, 841, 1430
BstYI RGATCY 1 cut(s) 1085
BstZI CGGCCG 1 cut(s) 1554
Bsu15I ATCGAT 1 cut(s) 2238
BsuI GTATCC 1 cut(s) 1816
BsuRI GGCC 8 cut(s) 48, 86, 236, 448, 1417, 1556, 1576, 1808
BsuTUI ATCGAT 1 cut(s) 2238
BtgI CCRYGG 1 cut(s) 32
BtgZI GCGATG 1 cut(s) 2183
BtrI CACGTC 1 cut(s) 1849
BtsCI GGATG 7 cut(s) 1046, 1109, 1441, 1651, 1923, 1951, 2313
BtsI GCAGTG 1 cut(s) 439
BtsIMutI CAGTG 7 cut(s) 237, 439, 735, 846, 1268, 2295, 2349
Cac8I GCNNGC 7 cut(s) 430, 630, 1278, 1419, 1536, 1796, 1866
CciI TCATGA 2 cut(s) 892, 2269
CfoI GCGC 1 cut(s) 1227
Cfr10I RCCGGY 2 cut(s) 1552, 1572
Cfr13I GGNCC 5 cut(s) 446, 447, 1468, 1575, 2373
ClaI ATCGAT 1 cut(s) 2238
Csp6I GTAC 6 cut(s) 344, 603, 669, 706, 1565, 1960
CspCI CAANNNNNGTGG 2 cut(s) 2325, 2360
CviAII CATG 6 cut(s) 17, 101, 893, 905, 2270, 2306
CviQI GTAC 6 cut(s) 344, 603, 669, 706, 1565, 1960
DdeI CTNAG 9 cut(s) 875, 1244, 1271, 1307, 1458, 1633, 1897, 2134, 2223
DraI TTTAAA 1 cut(s) 2088
DrdI GACNNNNNNGTC 1 cut(s) 2371
DseDI GACNNNNNNGTC 1 cut(s) 2371
EaeI YGGCCR 3 cut(s) 46, 84, 1554
EagI CGGCCG 1 cut(s) 1554
Eam1104I CTCTTC 1 cut(s) 492
EarI CTCTTC 1 cut(s) 492
EciI GGCGGA 1 cut(s) 1781
Ecl136II GAGCTC 1 cut(s) 2356
EclXI CGGCCG 1 cut(s) 1554
Eco130I CCWWGG 4 cut(s) 81, 450, 580, 633
Eco147I AGGCCT 1 cut(s) 1417
Eco24I GRGCYC 4 cut(s) 450, 794, 1526, 2358
Eco31I GGTCTC 1 cut(s) 2005
Eco32I GATATC 1 cut(s) 1789
Eco47I GGWCC 2 cut(s) 1468, 2373
Eco52I CGGCCG 1 cut(s) 1554
Eco53kI GAGCTC 1 cut(s) 2356
Eco57I CTGAAG 1 cut(s) 243
Eco88I CYCGRG 1 cut(s) 1832
EcoICRI GAGCTC 1 cut(s) 2356
EcoO109I RGGNCCY 2 cut(s) 447, 1468
EcoRII CCWGG 4 cut(s) 763, 833, 1517, 1674
EcoRV GATATC 1 cut(s) 1789
EcoT14I CCWWGG 4 cut(s) 81, 450, 580, 633
EcoT38I GRGCYC 4 cut(s) 450, 794, 1526, 2358
ErhI CCWWGG 4 cut(s) 81, 450, 580, 633
Esp3I CGTCTC 1 cut(s) 2209
FaeI CATG 6 cut(s) 20, 104, 896, 908, 2273, 2309
FalI AAGNNNNNCTT 4 cut(s) 640, 672, 1435, 1467
FaqI GGGAC 2 cut(s) 167, 1481
FatI CATG 6 cut(s) 16, 100, 892, 904, 2269, 2305
FauNDI CATATG 2 cut(s) 51, 1941
FbaI TGATCA 1 cut(s) 1168
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 9 cut(s) 357, 426, 960, 1212, 1329, 1332, 1539, 1625, 1893
FokI GGATG 7 cut(s) 1053, 1116, 1448, 1638, 1910, 1958, 2300
FriOI GRGCYC 4 cut(s) 450, 794, 1526, 2358
Fsp4HI GCNGC 9 cut(s) 357, 426, 960, 1212, 1329, 1332, 1539, 1625, 1893
FspBI CTAG 8 cut(s) 179, 401, 429, 1277, 1481, 1703, 1935, 2051
GlaI GCGC 1 cut(s) 1226
GluI GCNGC 9 cut(s) 357, 426, 960, 1212, 1329, 1332, 1539, 1625, 1893
GsuI CTGGAG 5 cut(s) 278, 932, 1658, 1679, 1940
HaeIII GGCC 8 cut(s) 48, 86, 236, 448, 1417, 1556, 1576, 1808
HapII CCGG 7 cut(s) 465, 755, 1547, 1553, 1557, 1573, 1682
HhaI GCGC 1 cut(s) 1227
Hin1II CATG 6 cut(s) 20, 104, 896, 908, 2273, 2309
Hin6I GCGC 1 cut(s) 1225
HinP1I GCGC 1 cut(s) 1225
HincII GTYRAC 1 cut(s) 1006
HindII GTYRAC 1 cut(s) 1006
HindIII AAGCTT 4 cut(s) 502, 654, 1614, 1872
HinfI GANTC 8 cut(s) 733, 942, 1671, 1815, 1949, 2033, 2185, 2235
HpaII CCGG 7 cut(s) 465, 755, 1547, 1553, 1557, 1573, 1682
HphI GGTGA 3 cut(s) 144, 486, 1536
Hpy166II GTNNAC 5 cut(s) 373, 406, 472, 706, 1006
Hpy188I TCNGA 5 cut(s) 922, 947, 1018, 1765, 2113
Hpy8I GTNNAC 5 cut(s) 373, 406, 472, 706, 1006
Hpy99I CGWCG 1 cut(s) 1409
HpyCH4III ACNGT 3 cut(s) 241, 338, 1858
HpyCH4IV ACGT 4 cut(s) 1404, 1848, 2025, 2366
HpyCH4V TGCA 9 cut(s) 163, 320, 425, 959, 1129, 1184, 1334, 1357, 2210
HpyF10VI GCNNNNNNNGC 8 cut(s) 422, 653, 1135, 1325, 1880, 1889, 1901, 1910
HpyF3I CTNAG 9 cut(s) 875, 1244, 1271, 1307, 1458, 1633, 1897, 2134, 2223
HpySE526I ACGT 4 cut(s) 1404, 1848, 2025, 2366
Hsp92II CATG 6 cut(s) 20, 104, 896, 908, 2273, 2309
HspAI GCGC 1 cut(s) 1225
Kpn2I TCCGGA 1 cut(s) 754
Ksp22I TGATCA 1 cut(s) 1168
LguI GCTCTTC 1 cut(s) 492
LmnI GCTCC 8 cut(s) 33, 144, 227, 822, 913, 1521, 1747, 1959
Lsp1109I GCAGC 8 cut(s) 343, 437, 971, 1198, 1315, 1318, 1550, 1904
LweI GCATC 3 cut(s) 45, 1550, 1807
MaeI CTAG 8 cut(s) 179, 401, 429, 1277, 1481, 1703, 1935, 2051
MaeII ACGT 4 cut(s) 1404, 1848, 2025, 2366
MaeIII GTNAC 5 cut(s) 492, 1718, 2030, 2242, 2293
MboII GAAGA 8 cut(s) 281, 479, 1244, 1301, 1988, 1991, 2021, 2194
MflI RGATCY 1 cut(s) 1085
MhlI GDGCHC 8 cut(s) 252, 450, 579, 794, 1071, 1305, 1526, 2358
MlsI TGGCCA 2 cut(s) 48, 86
MluNI TGGCCA 2 cut(s) 48, 86
MlyI GAGTC 4 cut(s) 951, 1665, 2027, 2179
Mox20I TGGCCA 2 cut(s) 48, 86
MroI TCCGGA 1 cut(s) 754
MroXI GAANNNNTTC 2 cut(s) 888, 2118
MscI TGGCCA 2 cut(s) 48, 86
MseI TTAA 2 cut(s) 2087, 2127
MslI CAYNNNNRTG 5 cut(s) 520, 743, 1428, 1928, 1944
Msp20I TGGCCA 2 cut(s) 48, 86
MspA1I CMGCKG 1 cut(s) 1534
MspI CCGG 7 cut(s) 465, 755, 1547, 1553, 1557, 1573, 1682
MspR9I CCNGG 4 cut(s) 765, 835, 1519, 1676
Mva1269I GAATGC 2 cut(s) 548, 1186
MvaI CCWGG 4 cut(s) 765, 835, 1519, 1676
MvnI CGCG 1 cut(s) 281
MwoI GCNNNNNNNGC 8 cut(s) 422, 653, 1135, 1325, 1880, 1889, 1901, 1910
NdeI CATATG 2 cut(s) 51, 1941
NheI GCTAGC 2 cut(s) 428, 1276
NlaIII CATG 6 cut(s) 20, 104, 896, 908, 2273, 2309
NmeAIII GCCGAG 1 cut(s) 256
NmuCI GTSAC 3 cut(s) 492, 2030, 2293
NspV TTCGAA 1 cut(s) 255
PaeR7I CTCGAG 1 cut(s) 1832
PagI TCATGA 2 cut(s) 892, 2269
PceI AGGCCT 1 cut(s) 1417
PciSI GCTCTTC 1 cut(s) 492
PctI GAATGC 2 cut(s) 548, 1186
PdmI GAANNNNTTC 2 cut(s) 888, 2118
PfeI GAWTC 4 cut(s) 733, 1815, 1949, 2235
PflMI CCANNNNNTGG 1 cut(s) 1079
PfoI TCCNGGA 1 cut(s) 1674
PkrI GCNGC 9 cut(s) 358, 427, 961, 1213, 1330, 1333, 1540, 1626, 1894
PleI GAGTC 4 cut(s) 950, 1665, 2027, 2179
PpsI GAGTC 4 cut(s) 950, 1665, 2027, 2179
PpuMI RGGWCCY 1 cut(s) 1468
Psp124BI GAGCTC 1 cut(s) 2358
Psp5II RGGWCCY 1 cut(s) 1468
Psp6I CCWGG 4 cut(s) 763, 833, 1517, 1674
PspGI CCWGG 4 cut(s) 763, 833, 1517, 1674
PspOMI GGGCCC 1 cut(s) 446
PspPI GGNCC 5 cut(s) 446, 447, 1468, 1575, 2373
PspPPI RGGWCCY 1 cut(s) 1468
PsrI GAACNNNNNNTAC 2 cut(s) 464, 496
PstI CTGCAG 2 cut(s) 427, 1336
PsuI RGATCY 1 cut(s) 1085
RsaI GTAC 6 cut(s) 345, 604, 670, 707, 1566, 1961
RsaNI GTAC 6 cut(s) 344, 603, 669, 706, 1565, 1960
RseI CAYNNNNRTG 5 cut(s) 520, 743, 1428, 1928, 1944
SacI GAGCTC 1 cut(s) 2358
SapI GCTCTTC 1 cut(s) 492
SaqAI TTAA 2 cut(s) 2087, 2127
SatI GCNGC 9 cut(s) 357, 426, 960, 1212, 1329, 1332, 1539, 1625, 1893
Sau96I GGNCC 5 cut(s) 446, 447, 1468, 1575, 2373
ScaI AGTACT 1 cut(s) 604
SchI GAGTC 4 cut(s) 951, 1665, 2027, 2179
ScrFI CCNGG 4 cut(s) 765, 835, 1519, 1676
SduI GDGCHC 8 cut(s) 252, 450, 579, 794, 1071, 1305, 1526, 2358
SfaNI GCATC 3 cut(s) 45, 1550, 1807
SfcI CTRYAG 2 cut(s) 423, 1332
Sfr274I CTCGAG 1 cut(s) 1832
SfuI TTCGAA 1 cut(s) 255
SinI GGWCC 2 cut(s) 1468, 2373
SlaI CTCGAG 1 cut(s) 1832
SmiMI CAYNNNNRTG 5 cut(s) 520, 743, 1428, 1928, 1944
SmlI CTYRAG 3 cut(s) 1802, 1832, 1869
SmoI CTYRAG 3 cut(s) 1802, 1832, 1869
SpeI ACTAGT 2 cut(s) 400, 1934
SseBI AGGCCT 1 cut(s) 1417
SsiI CCGC 4 cut(s) 1532, 1625, 1792, 2074
SspMI CTAG 8 cut(s) 179, 401, 429, 1277, 1481, 1703, 1935, 2051
SstI GAGCTC 1 cut(s) 2358
StuI AGGCCT 1 cut(s) 1417
StyD4I CCNGG 4 cut(s) 763, 833, 1517, 1674
StyI CCWWGG 4 cut(s) 81, 450, 580, 633
TaaI ACNGT 3 cut(s) 241, 338, 1858
TaiI ACGT 4 cut(s) 1407, 1851, 2028, 2369
TaqI TCGA 7 cut(s) 243, 255, 1512, 1833, 2007, 2233, 2238
TatI WGTACW 2 cut(s) 602, 705
TauI GCSGC 1 cut(s) 1627
TfiI GAWTC 4 cut(s) 733, 1815, 1949, 2235
Tru1I TTAA 2 cut(s) 2087, 2127
Tru9I TTAA 2 cut(s) 2087, 2127
TscAI CASTG 7 cut(s) 244, 439, 735, 846, 1275, 2302, 2349
TseFI GTSAC 3 cut(s) 492, 2030, 2293
TseI GCWGC 8 cut(s) 356, 425, 959, 1211, 1328, 1331, 1538, 1892
Tsp45I GTSAC 3 cut(s) 492, 2030, 2293
TspGWI ACGGA 3 cut(s) 480, 797, 2018
TspRI CASTG 7 cut(s) 244, 439, 735, 846, 1275, 2302, 2349
Van91I CCANNNNNTGG 1 cut(s) 1079
VpaK11BI GGWCC 2 cut(s) 1468, 2373
XapI RAATTY 4 cut(s) 1059, 1730, 2129, 2141
XcmI CCANNNNNNNNNTGG 1 cut(s) 1433
XhoI CTCGAG 1 cut(s) 1832
XmiI GTMKAC 1 cut(s) 405
XmnI GAANNNNTTC 2 cut(s) 888, 2118
XspI CTAG 8 cut(s) 179, 401, 429, 1277, 1481, 1703, 1935, 2051
ZrmI AGTACT 1 cut(s) 604
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.