Rmu_sc0005065.1_g000013

Domain in histone families 1 and 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005065.1
OG0000827
Physical Location & Seq
Forward (+)
45697 .. 52381
6685 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005065.1_g000013.1.cds

Sequence Viewer

Length: 5550 bp
atgataaacaagcttgctggtgctgtgatggagaagctcgcattttcagacccctccaaaacactcacaccagatcagaagaatgaaatcaaacgacgtctttgtagactcttacctgcgtttcacacacccgatcatcccacctatgccgtgatgattcgtagggcaattgaggagttgaatgaggaacaggggtcaactgaagaagcaatatcaaaatatattagagagaagtttgacggtttgccattggctcatgcaagtttcttgagtcttcacttgaagaagctaaatgagaggggagaaattgtttgtgtatcaaaaaattgctatatgcatccaactgataaaggtgattctctttctagaagaaagtgtgtcccgaaacaaaagaagactcggaagggttggggaaaaggaaactcagctaaaggaaatgaacataaaacattagcagaagaacaagttgaagtgactgagaaacagagaaagcagaggaagcaaagtcaaaaaccgcagtattgtaaggcagttgacaaccaaactggatctccagagcaagtcaatggacaacaatgtcaaagaaaaatggaagaaattgctgcaattgctgaaaagaaaagtcaagaacaaattgaagaagatcagcagagtaaggtgattgatgataaaaaagaatctcctgatgcacagcaaggagaagtaattaaacaacaaattcaaggtattgcagtcattgttgttccccgaaattccgcggaacagatatataaagtccccgaagaacaagaagttgaagtgactgaacaacagcagcagcacgggcagcaaagtcaagaactgagtcaagaagaacagcatagtatggtaattgactgtcaaaatggatctccagatgaagaaaatgtacagcaagatgaagtgaataggctgaaaagtcaaaatcaagtgcaattacctggagtgatagtcgaaaagcagaacattgaacagatatataaagaagatgaagtacaagtagaagtaactgaacaactgagagaagatgggcacgaaattcaagattcaattcaagcagaacagtgtagtaagatgattgaagataaatatggctctacagatgcgcagcaagagagagtgaatggacatgaaaatcagaaacatatgcaagatgttgcgttgattgttgataagcagaatgttgaagtcaagaagtatcaagtgaatgaagagcaagttgaagtgattgaacaaaaggcagaaaatgtgaagcaaagtgcagagccaatacagcacatgaaggtgattgattgtcaaaatggatcttcaaagcaacaaaatgaacagaaagatgaagtgaatggacaccaaagtgaaaatcaaatgcaagtaactgcagtgaatgatgttgaaaagtctaatttttcagaacagacacgtaatgtgaatgaagaagaacaagttgaagtgactgcacagagagaatatcatgtgaagcaaagtgcagaaccaatacagcacatgaaggtgattgattgtcaaaatggatcttcaaagcgacaaaatgaacagaaagatgaagtgaatggacagcaaagtgaaaatcaaatgcaagtaactgcagtggttgttgaaaagtctaatttttcagaacagacacgtaatgtgaatgaagaagaacaagttgaagtgactgcacagagagaatatgggcagcaaagtcaagaagagcaacataacaaggtgattgactgtcaaaatggatctccagagcaacaaaataaacagcaagaatatgtgaatgaggatcaattgcaagaaatcattgtgagttgtgaaaagcagattgacacaaaactgaaacacaaagtggctgatgagcgtattgaagtaagtatggataaaatagttgaagaacagtaccaaactaaagaacaattgtgtgaagtgattgaacaacatagtcaagctgtcaaaagagatatacagttacatggagaagcagttgaagcaattcggtctggaccagaggcacagcaaagtgatatgatttcagaacaaaatagactgcaagaccaaattgaattaataagtatgcaggagttattgcctaagaagcaagagaaagatgcggctactgttgtcaattcaaatgtttctattgcaagtcagaaattttcccaccatgtttcgtcaaacttgtctgaggagttattgtctaagaagcaagagaaagatgcggctactgtcgtcaattcaaatgtttctattgcaagtcagaaattttcccaccatgtttcgtcaaacttgtctgaggtgcagggaaagatgcagaagctgctggaaaataacattaaggtgcaggaaaagacacataagctgctggaaaataacattaaggtgcaggaaaagacacttcaggttcaggaaaagttgtttgagctgttgaaggagttagcagataccattcgaaatcctgttatagaaaaaagatcaatgccaatcattgctccttgtggagagagggaatatatagattgtggatttccagcaaaacagaagcaccaacctgagatcacagctcaaacaaaagcattgggatcccagctgaatgaaatgctagcatctcttgaactacccatggatgcagcagagttatttttaaagcagggaaagctatgcaaccttggtcagcaacaagtacctaagggccagaacaaatcaattaagaatatgcctgatgctgaacaacctcaacaacaggagattggaaattcagaattgttgcgggaactgccaacaatggaagaagagaatgaagaattatctggacctgttagaaaaagaattcgtttaagcattgaagcaaatcatgagaaagaaaagcaactgcaagtgcataatgctgaaggccatcctgatcttcgtagtcaagagaagccatctgtatctgtgctagtcccaagttttccagatgtcttcttgcactcgccaaactatgagcaggggacccagcaaccaaaagttcaaaagacagaaagacctcatgaaatcaaatcgctgtcagtggagggaggaattattgctcatgtatccaggacaaaccttatagaatcttctgttgatttgcttcaggaagaacaggagattgttcctgagctaacatatcaagaaaaccttcaagagcaagaacaagaaacgcagtcatttagtcacaagaagcatcaacaagctattctttctgatgtggtgaagacgcctgatttcctattagcaactggtgcggagcaggaagcagaaaatgtgattaaagacaaggatgttgagcttgatctgacagcaagtgaccaatcttgtcgaacacaacctgagcaaaagcagcagcagaggcaactaggtcttctgggtaaacaaccatctgaatcttattgtgaaggagcagaggcatctaaatatcaggatgaagaccatcaaccagaaaatgtgattaaggagaaggctgtacagtcaagtcacctgagtcttgaattgacagcaagtgagcaatccagtcaaagacaattggagaaacagcagcaacaaccgcagaggcaattacgtcctcgaggtaaaaagtcagctgagtctgattgtggagtggcaacggcacctgaatgccaggagcagcagctcagatatccaatgcaggaaagaatgaagcttgatcataaaccagcagagcagagtcaattgtgcccacggtgccagaggcactctgagtctgaaccgtctctcactacatctatggttgaattatcaccaagaaaaagtcaggatactgacagtcaaacagaggaaaagactccagagctgaagacatcagcagaggaaacaggccaaagacaggtccagcagaggcagcttcgaacaagaagcaaaaacctgtctgaattcaagcaaacatcactttcaaatactggaatgtcacaagtggataagccaggagccgaagatttgtctcaactgaaaaggcagcctcaagtggaaaagcctggagttggagatccatctcaatcgaagaagaaacaagttaaccgcttaaacaagcgaaagtggtgcactccagagcccacaacaatgcccaacgccattggtgcaatcgtcacttaccagagacggtcaagtcaaactatagagcccaaccctgaagcatttcaggatctaggaccaacactcgcagaccatttggagcaaaaagagaatcatcatggtcaacgaaagaagctcaaatcagcaaaagaaagtcctgatgagttggctctcacttcccagcatcttgtggtggatcctcacattctagtaaagcctccagtgctcaatccagctgcagtgggacaattgcctcaaacaacaaaagagctgccccagaaacagcagctgctgcaccatatgaaactgcgctcgtgcagccaagctgcatcgcaatctgaacctgatgttttgatagtgggactattgcctcaaacaacaaaagagctgccacagaaacagctgctgccccatatgaaactacactcaggcagccaagctgcatcgcaatctgaacccgatgtttcgatgattgatacgttgcccgcagagcaccattctgagcagccacaagaacagaagcatcctaagtggccacagaagcaaagagggaggactcctaaaccaaaactggatagagctgggcctgttaagcgtcaacagctgcaggaacaaccaaaaagacgagggaggccccgtaagttggatgtaaatactatatcagggagaaaattgatctcaaagaacaaacagaagcaaccaaagagtccagggaaggcaaaatctcgaaaagtgatcaaaggaaaactacagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaagcctcaaaaagtgactcaaggaacaccaaagagtcaagtgaggggaaggcttcaaaaaatgtctgaagaaacagtaaagagtcaagttagggagagggctcgagaagtgactgaaggaacctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Linker_histone

Protein Analysis

1849

Amino Acids

209.04

Weight (kDa)

8.58

Isoelectric Point (pI)

57.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 576, 4161
AatII GACGTC 1 cut(s) 100
AbsI CCTCGAGG 1 cut(s) 3603
Acc16I TGCGCA 1 cut(s) 1125
Acc36I ACCTGC 1 cut(s) 124
AccB1I GGYRCC 2 cut(s) 3646, 3741
AccI GTMKAC 1 cut(s) 106
AccII CGCG 1 cut(s) 758
AcoI YGGCCR 1 cut(s) 4661
AcsI RAATTY 8 cut(s) 717, 751, 1056, 2174, 2282, 2773, 2847, 3929
AcuI CTGAAG 7 cut(s) 222, 2402, 2928, 3116, 3872, 4206, 5511
AcyI GRCGYC 2 cut(s) 97, 3257
AdeI CACNNNGTG 1 cut(s) 1870
AfaI GTAC 5 cut(s) 909, 1014, 1922, 2703, 3504
AfiI CCNNNNNNNGG 3 cut(s) 3883, 4037, 4771
AflIII ACRYGT 2 cut(s) 1436, 1658
AjnI CCWGG 6 cut(s) 958, 3095, 3657, 3979, 4030, 4837
AleI CACNNNNGTG 1 cut(s) 1371
Alw21I GWGCWC 3 cut(s) 4100, 4356, 4623
Alw26I GTCTC 3 cut(s) 3774, 4002, 4147
Alw44I GTGCAC 1 cut(s) 4096
AlwNI CAGNNNCTG 4 cut(s) 2338, 4417, 4420, 4534
Ama87I CYCGRG 2 cut(s) 3603, 5526
AoxI GGCC 6 cut(s) 2710, 2911, 3874, 4661, 4712, 4760
ApaLI GTGCAC 1 cut(s) 4096
ApoI RAATTY 8 cut(s) 717, 751, 1056, 2174, 2282, 2773, 2847, 3929
AseI ATTAAT 1 cut(s) 2087
Asp700I GAANNNNTTC 3 cut(s) 2013, 3177, 4191
AspLEI GCGC 2 cut(s) 1126, 4440
AspS9I GGNCC 8 cut(s) 2024, 2710, 2831, 3009, 3886, 4205, 4712, 4761
AsuHPI GGTGA 8 cut(s) 365, 670, 1315, 1540, 1756, 3262, 3506, 3789
AsuII TTCGAA 2 cut(s) 2470, 3904
AsuNHI GCTAGC 1 cut(s) 2620
AvaI CYCGRG 2 cut(s) 3603, 5526
AvaII GGWCC 5 cut(s) 2024, 2831, 3009, 3886, 4205
AxyI CCTNAGG 1 cut(s) 2706
BaeGI GKGCMC 3 cut(s) 1053, 3737, 4100
BalI TGGCCA 1 cut(s) 4663
BamHI GGATCC 2 cut(s) 2600, 4324
BanI GGYRCC 2 cut(s) 3646, 3741
BanII GRGCYC 3 cut(s) 4110, 4179, 5527
BarI GAAGNNNNNNTAC 4 cut(s) 891, 923, 996, 1028
BauI CACGAG 1 cut(s) 4441
BbsI GAAGAC 7 cut(s) 266, 401, 2971, 3260, 3392, 3471, 3860
Bbv12I GWGCWC 3 cut(s) 4100, 4356, 4623
BccI CCATC 7 cut(s) 22, 1040, 2922, 2950, 3424, 3477, 4054
BceAI ACGGC 2 cut(s) 134, 3660
BcgI CGANNNNNNTGC 2 cut(s) 4077, 4111
BciT130I CCWGG 6 cut(s) 960, 3097, 3659, 3981, 4032, 4839
BciVI GTATCC 2 cut(s) 3103, 3808
BclI TGATCA 2 cut(s) 3703, 4863
BcoDI GTCTC 3 cut(s) 3774, 4002, 4147
BfaI CTAG 6 cut(s) 366, 2621, 2957, 3395, 4202, 4337
BfmI CTRYAG 7 cut(s) 1116, 1395, 1620, 4170, 4365, 4733, 4877
BfuAI ACCTGC 1 cut(s) 124
BfuI GTATCC 2 cut(s) 3103, 3808
Bme1390I CCNGG 6 cut(s) 960, 3097, 3659, 3981, 4032, 4839
Bme18I GGWCC 5 cut(s) 2024, 2831, 3009, 3886, 4205
BmeT110I CYCGRG 2 cut(s) 3603, 5526
BmgT120I GGNCC 8 cut(s) 2024, 2710, 2831, 3009, 3886, 4205, 4712, 4761
BmiI GGNNCC 9 cut(s) 2602, 3010, 3011, 3648, 3743, 3985, 4326, 4763, 5545
BmrFI CCNGG 6 cut(s) 960, 3097, 3659, 3981, 4032, 4839
BmtI GCTAGC 1 cut(s) 2624
BpiI GAAGAC 7 cut(s) 266, 401, 2971, 3260, 3392, 3471, 3860
BpmI CTGGAG 8 cut(s) 537, 876, 981, 1752, 3828, 4053, 4086, 4332
Bpu10I CCTNAGC 2 cut(s) 3156, 3369
Bpu14I TTCGAA 2 cut(s) 2470, 3904
BsaAI YACGTR 2 cut(s) 1439, 1661
BsaHI GRCGYC 2 cut(s) 97, 3257
BsaJI CCNNGG 5 cut(s) 756, 2640, 2686, 3737, 4838
Bsc4I CCNNNNNNNGG 3 cut(s) 3883, 4037, 4771
Bse1I ACTGG 6 cut(s) 550, 3283, 3549, 3961, 4349, 4704
Bse21I CCTNAGG 1 cut(s) 2706
Bse3DI GCAATG 1 cut(s) 2505
BseBI CCWGG 6 cut(s) 960, 3097, 3659, 3981, 4032, 4839
BseDI CCNNGG 5 cut(s) 756, 2640, 2686, 3737, 4838
BseGI GGATG 8 cut(s) 136, 337, 2650, 2914, 3325, 3466, 4651, 4780
BseLI CCNNNNNNNGG 3 cut(s) 3883, 4037, 4771
BseMI GCAATG 1 cut(s) 2505
BseNI ACTGG 6 cut(s) 550, 3283, 3549, 3961, 4349, 4704
BseRI GAGGAG 2 cut(s) 188, 2222
BseSI GKGCMC 3 cut(s) 1053, 3737, 4100
BseYI CCCAGC 4 cut(s) 2604, 3012, 4308, 4709
BsgI GTGCAG 9 cut(s) 1299, 1458, 1524, 1680, 2339, 2381, 2423, 4406, 4465
Bsh1236I CGCG 1 cut(s) 758
BshFI GGCC 6 cut(s) 2712, 2913, 3876, 4663, 4714, 4762
BshNI GGYRCC 2 cut(s) 3646, 3741
BsiHKAI GWGCWC 3 cut(s) 4100, 4356, 4623
BsiHKCI CYCGRG 2 cut(s) 3603, 5526
BslFI GGGAC 6 cut(s) 365, 761, 2945, 3022, 4386, 4503
BslI CCNNNNNNNGG 3 cut(s) 3883, 4037, 4771
BsmAI GTCTC 3 cut(s) 3774, 4002, 4147
BsmBI CGTCTC 2 cut(s) 3774, 4147
BsmFI GGGAC 6 cut(s) 365, 761, 2945, 3022, 4386, 4503
BsmI GAATGC 1 cut(s) 3659
BsnI GGCC 6 cut(s) 2712, 2913, 3876, 4663, 4714, 4762
BsoBI CYCGRG 2 cut(s) 3603, 5526
Bsp119I TTCGAA 2 cut(s) 2470, 3904
Bsp1286I GDGCHC 8 cut(s) 1053, 3737, 4100, 4110, 4179, 4356, 4623, 5527
Bsp1407I TGTACA 2 cut(s) 907, 3502
Bsp19I CCATGG 1 cut(s) 2640
BspANI GGCC 6 cut(s) 2712, 2913, 3876, 4663, 4714, 4762
BspFNI CGCG 1 cut(s) 758
BspHI TCATGA 2 cut(s) 2872, 3046
BspLI GGNNCC 9 cut(s) 2602, 3010, 3011, 3648, 3743, 3985, 4326, 4763, 5545
BspMAI CTGCAG 4 cut(s) 1399, 1624, 4369, 4737
BspMI ACCTGC 1 cut(s) 124
BspOI GCTAGC 1 cut(s) 2624
BspQI GCTCTTC 2 cut(s) 1224, 1722
BspT104I TTCGAA 2 cut(s) 2470, 3904
BspT107I GGYRCC 2 cut(s) 3646, 3741
BsrDI GCAATG 1 cut(s) 2505
BsrGI TGTACA 2 cut(s) 907, 3502
BsrI ACTGG 6 cut(s) 550, 3283, 3549, 3961, 4349, 4704
BssECI CCNNGG 5 cut(s) 756, 2640, 2686, 3737, 4838
BssNI GRCGYC 2 cut(s) 97, 3257
BssSI CACGAG 1 cut(s) 4441
BssT1I CCWWGG 2 cut(s) 2640, 2686
Bst2BI CACGAG 1 cut(s) 4441
Bst2UI CCWGG 6 cut(s) 960, 3097, 3659, 3981, 4032, 4839
Bst6I CTCTTC 3 cut(s) 1224, 1722, 2805
BstACI GRCGYC 2 cut(s) 97, 3257
BstAPI GCANNNNNTGC 3 cut(s) 2338, 3281, 4420
BstAUI TGTACA 2 cut(s) 907, 3502
BstBAI YACGTR 2 cut(s) 1439, 1661
BstBI TTCGAA 2 cut(s) 2470, 3904
BstC8I GCNNGC 4 cut(s) 15, 39, 2622, 4614
BstDSI CCRYGG 3 cut(s) 756, 2640, 3737
BstF5I GGATG 8 cut(s) 136, 337, 2650, 2914, 3325, 3466, 4651, 4780
BstFNI CGCG 1 cut(s) 758
BstHHI GCGC 2 cut(s) 1126, 4440
BstMAI GTCTC 3 cut(s) 3774, 4002, 4147
BstNI CCWGG 6 cut(s) 960, 3097, 3659, 3981, 4032, 4839
BstSCI CCNGG 6 cut(s) 958, 3095, 3657, 3979, 4030, 4837
BstSFI CTRYAG 7 cut(s) 1116, 1395, 1620, 4170, 4365, 4733, 4877
BstSLI GKGCMC 3 cut(s) 1053, 3737, 4100
BstUI CGCG 1 cut(s) 758
BstV2I GAAGAC 7 cut(s) 266, 401, 2971, 3260, 3392, 3471, 3860
BstX2I RGATCY 9 cut(s) 548, 887, 1322, 1547, 1763, 2600, 4042, 4198, 4324
BstYI RGATCY 9 cut(s) 548, 887, 1322, 1547, 1763, 2600, 4042, 4198, 4324
Bsu36I CCTNAGG 1 cut(s) 2706
BsuI GTATCC 2 cut(s) 3103, 3808
BsuRI GGCC 6 cut(s) 2712, 2913, 3876, 4663, 4714, 4762
BtgI CCRYGG 3 cut(s) 756, 2640, 3737
BtgZI GCGATG 2 cut(s) 4443, 4557
BtsCI GGATG 8 cut(s) 136, 337, 2650, 2914, 3325, 3466, 4651, 4780
BtsI GCAGTG 3 cut(s) 1404, 1629, 4374
BtsIMutI CAGTG 6 cut(s) 1088, 1404, 1629, 3072, 4356, 4374
BveI ACCTGC 1 cut(s) 124
Cac8I GCNNGC 4 cut(s) 15, 39, 2622, 4614
CaiI CAGNNNCTG 4 cut(s) 2338, 4417, 4420, 4534
CciI TCATGA 2 cut(s) 2872, 3046
CfoI GCGC 2 cut(s) 1126, 4440
Cfr13I GGNCC 8 cut(s) 2024, 2710, 2831, 3009, 3886, 4205, 4712, 4761
Cfr42I CCGCGG 1 cut(s) 759
CseI GACGC 2 cut(s) 3265, 4712
Csp6I GTAC 5 cut(s) 908, 1013, 1921, 2702, 3503
CviQI GTAC 5 cut(s) 908, 1013, 1921, 2702, 3503
DraI TTTAAA 1 cut(s) 2664
DraIII CACNNNGTG 1 cut(s) 1870
DrdI GACNNNNNNGTC 2 cut(s) 576, 4161
DseDI GACNNNNNNGTC 2 cut(s) 576, 4161
EaeI YGGCCR 1 cut(s) 4661
Eam1104I CTCTTC 3 cut(s) 1224, 1722, 2805
EarI CTCTTC 3 cut(s) 1224, 1722, 2805
Eco130I CCWWGG 2 cut(s) 2640, 2686
Eco24I GRGCYC 3 cut(s) 4110, 4179, 5527
Eco32I GATATC 1 cut(s) 3677
Eco47I GGWCC 5 cut(s) 2024, 2831, 3009, 3886, 4205
Eco57I CTGAAG 7 cut(s) 222, 2402, 2928, 3116, 3872, 4206, 5511
Eco81I CCTNAGG 1 cut(s) 2706
Eco88I CYCGRG 2 cut(s) 3603, 5526
EcoO109I RGGNCCY 2 cut(s) 3009, 4761
EcoRI GAATTC 2 cut(s) 2847, 3929
EcoRII CCWGG 6 cut(s) 958, 3095, 3657, 3979, 4030, 4837
EcoRV GATATC 1 cut(s) 3677
EcoT14I CCWWGG 2 cut(s) 2640, 2686
EcoT22I ATGCAT 1 cut(s) 339
EcoT38I GRGCYC 3 cut(s) 4110, 4179, 5527
ErhI CCWWGG 2 cut(s) 2640, 2686
Esp3I CGTCTC 2 cut(s) 3774, 4147
FalI AAGNNNNNCTT 4 cut(s) 3162, 3194, 3222, 3254
FaqI GGGAC 6 cut(s) 365, 761, 2945, 3022, 4386, 4503
FauI CCCGC 2 cut(s) 2781, 4621
FauNDI CATATG 3 cut(s) 1164, 4428, 4542
FbaI TGATCA 2 cut(s) 3703, 4863
FblI GTMKAC 1 cut(s) 106
FokI GGATG 8 cut(s) 123, 324, 2657, 2901, 3332, 3473, 4638, 4787
FriOI GRGCYC 3 cut(s) 4110, 4179, 5527
FspBI CTAG 6 cut(s) 366, 2621, 2957, 3395, 4202, 4337
FspI TGCGCA 1 cut(s) 1125
GlaI GCGC 2 cut(s) 1125, 4439
GsaI CCCAGC 4 cut(s) 2608, 3016, 4312, 4713
GsuI CTGGAG 8 cut(s) 537, 876, 981, 1752, 3828, 4053, 4086, 4332
HaeIII GGCC 6 cut(s) 2712, 2913, 3876, 4663, 4714, 4762
HgaI GACGC 2 cut(s) 3265, 4712
HhaI GCGC 2 cut(s) 1126, 4440
Hin1I GRCGYC 2 cut(s) 97, 3257
Hin6I GCGC 2 cut(s) 1124, 4438
HinP1I GCGC 2 cut(s) 1124, 4438
HincII GTYRAC 5 cut(s) 198, 535, 4072, 4253, 4727
HindII GTYRAC 5 cut(s) 198, 535, 4072, 4253, 4727
HindIII AAGCTT 2 cut(s) 11, 3698
HpaI GTTAAC 1 cut(s) 4072
HphI GGTGA 8 cut(s) 365, 670, 1315, 1540, 1756, 3262, 3506, 3789
Hpy166II GTNNAC 8 cut(s) 107, 198, 535, 3410, 4072, 4098, 4253, 4727
Hpy8I GTNNAC 8 cut(s) 107, 198, 535, 3410, 4072, 4098, 4253, 4727
Hpy99I CGWCG 1 cut(s) 99
HpyCH4IV ACGT 5 cut(s) 97, 1438, 1660, 3598, 4607
HpySE526I ACGT 5 cut(s) 97, 1438, 1660, 3598, 4607
Hsp92I GRCGYC 2 cut(s) 97, 3257
HspAI GCGC 2 cut(s) 1124, 4438
KflI GGGWCCC 1 cut(s) 3009
Ksp22I TGATCA 2 cut(s) 3703, 4863
KspAI GTTAAC 1 cut(s) 4072
KspI CCGCGG 1 cut(s) 759
LguI GCTCTTC 2 cut(s) 1224, 1722
LmnI GCTCC 6 cut(s) 2515, 3286, 3437, 3661, 3983, 4228
MaeI CTAG 6 cut(s) 366, 2621, 2957, 3395, 4202, 4337
MaeII ACGT 5 cut(s) 97, 1438, 1660, 3598, 4607
MfeI CAATTG 7 cut(s) 168, 606, 1811, 1937, 3560, 3728, 4376
MflI RGATCY 9 cut(s) 548, 887, 1322, 1547, 1763, 2600, 4042, 4198, 4324
MhlI GDGCHC 8 cut(s) 1053, 3737, 4100, 4110, 4179, 4356, 4623, 5527
MlsI TGGCCA 1 cut(s) 4663
MluNI TGGCCA 1 cut(s) 4663
MmeI TCCRAC 3 cut(s) 365, 4018, 4752
Mox20I TGGCCA 1 cut(s) 4663
Mph1103I ATGCAT 1 cut(s) 339
MroXI GAANNNNTTC 3 cut(s) 2013, 3177, 4191
MscI TGGCCA 1 cut(s) 4663
MslI CAYNNNNRTG 7 cut(s) 1301, 1371, 1526, 2357, 2399, 3652, 4115
Msp20I TGGCCA 1 cut(s) 4663
MspA1I CMGCKG 7 cut(s) 758, 2608, 3620, 4364, 4417, 4531, 4732
MspR9I CCNGG 6 cut(s) 960, 3097, 3659, 3981, 4032, 4839
MunI CAATTG 7 cut(s) 168, 606, 1811, 1937, 3560, 3728, 4376
Mva1269I GAATGC 1 cut(s) 3659
MvaI CCWGG 6 cut(s) 960, 3097, 3659, 3981, 4032, 4839
MvnI CGCG 1 cut(s) 758
NcoI CCATGG 1 cut(s) 2640
NdeI CATATG 3 cut(s) 1164, 4428, 4542
NheI GCTAGC 1 cut(s) 2620
NlaIV GGNNCC 9 cut(s) 2602, 3010, 3011, 3648, 3743, 3985, 4326, 4763, 5545
NsbI TGCGCA 1 cut(s) 1125
NsiI ATGCAT 1 cut(s) 339
NspV TTCGAA 2 cut(s) 2470, 3904
OliI CACNNNNGTG 1 cut(s) 1371
PaeR7I CTCGAG 2 cut(s) 3603, 5526
PagI TCATGA 2 cut(s) 2872, 3046
PciSI GCTCTTC 2 cut(s) 1224, 1722
PctI GAATGC 1 cut(s) 3659
PdmI GAANNNNTTC 3 cut(s) 2013, 3177, 4191
PfeI GAWTC 7 cut(s) 157, 356, 677, 1064, 3113, 3422, 4240
PfoI TCCNGGA 1 cut(s) 3095
Ppu21I YACGTR 2 cut(s) 1439, 1661
PpuMI RGGWCCY 1 cut(s) 3009
PshBI ATTAAT 1 cut(s) 2087
Psp5II RGGWCCY 1 cut(s) 3009
Psp6I CCWGG 6 cut(s) 958, 3095, 3657, 3979, 4030, 4837
PspFI CCCAGC 4 cut(s) 2604, 3012, 4308, 4709
PspGI CCWGG 6 cut(s) 958, 3095, 3657, 3979, 4030, 4837
PspN4I GGNNCC 9 cut(s) 2602, 3010, 3011, 3648, 3743, 3985, 4326, 4763, 5545
PspPI GGNCC 8 cut(s) 2024, 2710, 2831, 3009, 3886, 4205, 4712, 4761
PspPPI RGGWCCY 1 cut(s) 3009
PspXI VCTCGAGB 1 cut(s) 3603
PstI CTGCAG 4 cut(s) 1399, 1624, 4369, 4737
PstNI CAGNNNCTG 4 cut(s) 2338, 4417, 4420, 4534
PsuI RGATCY 9 cut(s) 548, 887, 1322, 1547, 1763, 2600, 4042, 4198, 4324
PvuII CAGCTG 6 cut(s) 2608, 3620, 4364, 4417, 4531, 4732
RsaI GTAC 5 cut(s) 909, 1014, 1922, 2703, 3504
RsaNI GTAC 5 cut(s) 908, 1013, 1921, 2702, 3503
RseI CAYNNNNRTG 7 cut(s) 1301, 1371, 1526, 2357, 2399, 3652, 4115
SacII CCGCGG 1 cut(s) 759
SapI GCTCTTC 2 cut(s) 1224, 1722
Sau96I GGNCC 8 cut(s) 2024, 2710, 2831, 3009, 3886, 4205, 4712, 4761
ScrFI CCNGG 6 cut(s) 960, 3097, 3659, 3981, 4032, 4839
SduI GDGCHC 8 cut(s) 1053, 3737, 4100, 4110, 4179, 4356, 4623, 5527
SfcI CTRYAG 7 cut(s) 1116, 1395, 1620, 4170, 4365, 4733, 4877
Sfr274I CTCGAG 2 cut(s) 3603, 5526
Sfr303I CCGCGG 1 cut(s) 759
SfuI TTCGAA 2 cut(s) 2470, 3904
SgrBI CCGCGG 1 cut(s) 759
SinI GGWCC 5 cut(s) 2024, 2831, 3009, 3886, 4205
SlaI CTCGAG 2 cut(s) 3603, 5526
SmiMI CAYNNNNRTG 7 cut(s) 1301, 1371, 1526, 2357, 2399, 3652, 4115
SspMI CTAG 6 cut(s) 366, 2621, 2957, 3395, 4202, 4337
StyD4I CCNGG 6 cut(s) 958, 3095, 3657, 3979, 4030, 4837
StyI CCWWGG 2 cut(s) 2640, 2686
TaiI ACGT 5 cut(s) 100, 1441, 1663, 3601, 4610
TaqI TCGA 9 cut(s) 972, 2470, 3358, 3604, 3904, 4055, 4595, 4855, 5527
TaqII GACCGA 1 cut(s) 2007
TatI WGTACW 3 cut(s) 907, 1012, 3502
TauI GCSGC 2 cut(s) 2135, 2243
TfiI GAWTC 7 cut(s) 157, 356, 677, 1064, 3113, 3422, 4240
TscAI CASTG 6 cut(s) 1088, 1404, 1629, 3072, 4356, 4374
TspRI CASTG 6 cut(s) 1088, 1404, 1629, 3072, 4356, 4374
VneI GTGCAC 1 cut(s) 4096
VpaK11BI GGWCC 5 cut(s) 2024, 2831, 3009, 3886, 4205
VspI ATTAAT 1 cut(s) 2087
XapI RAATTY 8 cut(s) 717, 751, 1056, 2174, 2282, 2773, 2847, 3929
XbaI TCTAGA 1 cut(s) 365
XhoI CTCGAG 2 cut(s) 3603, 5526
XmiI GTMKAC 1 cut(s) 106
XmnI GAANNNNTTC 3 cut(s) 2013, 3177, 4191
XspI CTAG 6 cut(s) 366, 2621, 2957, 3395, 4202, 4337
ZraI GACGTC 1 cut(s) 98
Zsp2I ATGCAT 1 cut(s) 339
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.