Rh7AG228300

Domain in histone families 1 and 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0000827
Physical Location & Seq
Forward (+)
21605807 .. 21611126
5320 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG228300.1

Sequence Viewer

Length: 4077 bp
ATGTTAACGATCAAGCTCCTTTCTTTCTATTATTTTTCAGCTGTTGCAATGTCTGCCGAAGTAGTTGAACATGTGAAATTAGCCGAAGAACGAGATGGAGTTGGTGAAAATGAGAGAGAATTAGGGTTGCAATGTCGAGAACCGGTTCGAGAAGATGAGCAGAGTAAGGTCATTGATGATCAGAATGGATGTCCTGGTGAGGATCAAGATGAGCTGATTGGACAACTGATTAAGGAGGAGGGAGTGATTGACTTGACTGAGCAAAAACTACAACATGGGAAGCAATGTCAAGAAAGTGGTTCTCCAATCACTACATCTTTCGGCTCATCCGGAGAAGGGAAATGCGAAGAGACTGAGGAACATCAAGTTGAAGTGACTGAGCAACAACTACAACATGGGGAGCAAAGTCGAGAACTTATTCTAGAAAAAGAAGATAGCTTTGTGATTGAGTATCAACAAAATGGTTCGCCGGAGCCACAGTATGAGGGGCAAGATGAAGCAAATGGGGAGAAGAACCACAATCAAATGCAAGTAACTGAAGTGATTGGTGCAGAGCAGACATGTAAAGCAGAAATTGAGGTTACTGAACAACATAGAGAAGATAGGCTGCAAAGTCAAGAACCAATTCAAGCAGACCATCAACTTGGGTTGGGTGATGAGCAGCAAAATGAAGTTATTGGACAAAAAATGCAAGAAATTGCATTGGTTATTGAAGAGCAGGATATTGTGGAAGAGAAGTATAGAGTGACTGAAGGACAAGTTGAAGTGAGTGAACAATGGCTGCAATTTTGTCAGGAATTTGTTCAAGAAGAGCAACATAGTTTGCTGATTGACTATAAAGATGGTTCTTTGGAGAAACATATTGAACAGCAAGATATAGTCAATGAACAGAAAAGTCAAAAGCAGATGCAAGTAACTGCAGTCATTGTTGAGAACTATAATGTTGCAGAACAGACATGTAAAGTAGAAAATGGGCTGCCCAATCAAGAAGAACAGAATATTAAGGTGATTGACAATGTAAATGTATGTCCAGATGAGCAGCAAGGTGAAGTGATTGGACATCAAGTTCAGAACCAAATGCAAGAAATTGCATTGATTGTTGAAAAGCAGAATGTTGTAGTACAGAAATATGAAGTGACCGAACAACAGATAGAAGATGGGCATCAAAGTCAAGAACCAATTCAAGAGGTACAGAAAAATAAGGTGAGCAAAGCACAAGTTCAAGTGACTGAACAACAACCGGAATATGGACAGCAAAGTCGAGAACCGATTCAAGAAGAACAGCATGATAAGATGGCTGAAGCTGAAAGTGGATCTCCAAATGAGAAGCAAGGTGATGTGAATGGACATCACATTCAGATACAATGTCAAGAATTTATTGCTAAAAATCAGAATGTTGCAGTACAGAAGTATAAAGTGACTGAAGAACAAGTTGAAGTGATTGAACAGCAGACAGAATGTGGACAGCAAAACCAAGAACCAATTCAAGAACAGAACAGTAAGGTGATTGACTATCAAAATGGATTGTCAAAGCCAGAAAATGAACAGAAAGATGAAGTGAATGGACAGAAAAATAAAAGTCAAATACTAGTAATTACTGAGATTGTTGATAATCACAATGTTGCAGAGCTTTTTCATGAGGTGACCAAAGAACAAGAAGTTGAAGTAACTGAACAACAGAGGGACCATGGGCAGCAAAGTCAAGAAGAACAGAATAGTAAGGTGATTGACTGTCAAGATGGATATCCAATGCAACAAAATGAACAGCTAGATGGCGTAAATGGCAATCAAGTTCAAAATCAAATGCAAGATATCGTAGTGAGTGTTGAAAAGCAGATTGATGCTAAACTGAAATATAAAGTGCCTGAAGATCAAATGGAAGAACCGTGTCATAGTACAGAACAACAATGTGAAGTGACCAAAGAACATATTGAAGGCATTAAAAGACAAATTCAATTCCAAGAAGAAGTAGTTGAAGGGATTGACAAGCTGACTACAGCAGAAGCACAGCAAGTTGAGAATGTTTCAGAATTGCAAGAGCAAATTGAGTTATTAAGGACGATCCTTAATGCTGGGTTGGCCTTTCTCCCTCTATGTTTTATGTCAGTTGTGTTATTGTTTATTTGTTATGTGCCTTTATCTCATTTCATAAACAGCAGTATGCAGGAGTCGTTTTGCAAGAAGCAAGAGAAAGCTGCAGCCATAGCCGTTAATTCAACTCCTCTTACTAGGCAGAAACTGCCCTACCAAAGTTCATCAACTTTCTCTAGGGAGAATTGTTTAGAATTGTTGAGGATGACGCATAAACTTCAGGAAAAGACACATAGGGTGCAGGAAAGTTTGTTGGATCTCTTGACCACTAGAGAGTTAAGCCATACAACTCCTAACTCTTTTGTGGACTTAGAGGAAAGAACAATGCCAATTGCTGATTCTTGTGGAGAGAGGGAATACATGGATTGTGGTTTTCCGGCACAAATGAAGCACCACCAGCTGAGGCAACTACGTCCATGGGGTAAAAAAGCATCTGAATCTGATTGCAGAGTATCGAAGGAACCTAACTGTCAGGAGCAGCAGCACAGAGATCCAGTACAGGAAAAAAGTAAGTGTGATGGTCAAGTAGTTGAGTTATCATGTCAAACACAGCAACAGTCACGGGAACTAGCACAGCAGAGGGAATTGCCTCCCCAGGGCCAGAGGCGGTCCAAATCTGAATCGTTACTCACTACATCTGTGGTGGACTTATCACCAAGAAGGAATCAGGATCCCCAGCAATTAAACACTGGAGTAACTGAAAAGCCTCAAAAACTGAAGACATCAGCAAAGAAAACAGGCCAAACACAGCAGCAGCAGAGGCAACTTAGATCTCGAGGAAAAATTTTGTCTGAATGTAAACAAGTAACAACTAGATCTATGGCAGGTTCATCACCCTCACAGCCTCTTTATGAGCAGTATCAGTTGATTTCAAGTACTGCAAGGTCTCAAGTGGAAAAGCCGGGAATAGAAAATTCATCTCAATCGAAGAAGCAACCAGCAAATCACTCTAATCGGCGAAAGCGGGGAACACCAGAGCCTACAACAATGCCAAATGCCATTGGTCCAATCCTCCCTTGCAAGAAACTAGCATTAGGCTGTCAGAATGTAGAACTTCCCACTCCTGAAGCATGTGAAGATGTAGGACCAACAATCATGGACAAGTCATCTCAACCGGTGGTGCAAAGTACAGATCATCATGGTCAACAAAAGATGTTGAAATCCAAGCCAACAACAATGGCAGAAAGTCCACAGCTCAATTCAGCATCAGTGGAAGATCTTCCTCAAACAGCAAAAGAGCTGCAACAGAAGCAGCTGTGCCATATGAACTTACGTTCATGCAGCCAAGCTGCATCACAATCTGAGCTTGTTGTATCGATGGCACAATCATTGCCCTCGGAGCACCATTATGAGCAGCCACAAGAAATGAAGCATCAAGGCCTACGGAGGCCTAAGTTGACTTCACACAATCAGCATAATGGTGAACTTCAGCTTCCAAAACATCCTGAGCAGCCACAGAAACCAAGAGGGAGGCCTTCTAAACGAAAACTGGATGTGGCTGCGACTGAAGATGTATCATTGCCTGCTAAGTATCAGAAACTGCAGGAAGAACCACAAAATCAAAGACAAGAGAGGCCTCCTAAGTTGGAAAGAAATATGGTTTTGGGTCTTTTTGCTGCATCAAAATATGAACCTGCTCCACCGATGACAGAACCACCGTTTTTAAAGCTGAATCCAGATAATGAGCATAATGTTGAGCTGCAGCCCCTGAAGCATCCTGAGCAACCACAAAAACGAAGGGGGAGGCCTCGAAAGTTGAATCCAGATAATGAGCTTGTGAAGAACTGCCGCACCCAAAGTACCTTGAGCAGCCACAAAAGGGAAGACGAACTGCAGCTGCCAAAGCAACCTGAGCAGCCACAAAATCCAAAAAGACAGCGAGGGAGGCCCTGTAACATCTCAGTGAACGAGCTGAAGCAAGAAATGAGTCAGAGGGAAAGGCGTCAAAGCAAGCGACTGAAGGAACAGAAGGAAGCGACTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Linker_histone

Protein Analysis

1358

Amino Acids

155.07

Weight (kDa)

5.16

Isoelectric Point (pI)

68.92

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1257
Acc36I ACCTGC 2 cut(s) 2906, 3733
AccIII TCCGGA 1 cut(s) 329
AciI CCGC 3 cut(s) 2698, 3055, 3880
AclWI GGATC 7 cut(s) 210, 1321, 2056, 2355, 2576, 2756, 2769
AcsI RAATTY 5 cut(s) 797, 1373, 1950, 2874, 3004
AcyI GRCGYC 1 cut(s) 4033
AfaI GTAC 8 cut(s) 1122, 1191, 1404, 1897, 2589, 2968, 3220, 3892
AfiI CCNNNNNNNGG 4 cut(s) 336, 1247, 2687, 3910
AflIII ACRYGT 3 cut(s) 70, 560, 956
AgeI ACCGGT 2 cut(s) 142, 3205
AhlI ACTAGT 1 cut(s) 1588
AjnI CCWGG 2 cut(s) 193, 2685
AjuI GAANNNNNNNTTGG 4 cut(s) 1467, 1499, 2413, 2445
AloI GAACNNNNNNTCC 2 cut(s) 1050, 1082
Alw21I GWGCWC 1 cut(s) 3435
Alw26I GTCTC 2 cut(s) 344, 2982
AlwI GGATC 7 cut(s) 210, 1321, 2056, 2355, 2576, 2756, 2769
AlwNI CAGNNNCTG 3 cut(s) 2239, 3631, 3799
Ama87I CYCGRG 1 cut(s) 2865
Aor13HI TCCGGA 1 cut(s) 329
AoxI GGCC 9 cut(s) 2079, 2689, 2830, 3469, 3479, 3563, 3665, 3836, 3977
ApoI RAATTY 5 cut(s) 797, 1373, 1950, 2874, 3004
AsiGI ACCGGT 2 cut(s) 142, 3205
Asp700I GAANNNNTTC 8 cut(s) 144, 417, 624, 801, 1179, 1269, 1482, 3309
AspS9I GGNCC 6 cut(s) 1684, 2689, 2700, 3095, 3176, 3978
AsuC2I CCSGG 1 cut(s) 2994
AvaI CYCGRG 1 cut(s) 2865
AvaII GGWCC 4 cut(s) 1684, 2700, 3095, 3176
BamHI GGATCC 1 cut(s) 2761
BbsI GAAGAC 2 cut(s) 2816, 3921
Bbv12I GWGCWC 1 cut(s) 3435
BbvCI CCTCAGC 1 cut(s) 2492
BccI CCATC 9 cut(s) 89, 645, 836, 1151, 1288, 1733, 1766, 2603, 3403
BceAI ACGGC 1 cut(s) 2192
BciT130I CCWGG 2 cut(s) 195, 2687
BclI TGATCA 1 cut(s) 178
BcnI CCSGG 1 cut(s) 2994
BcoDI GTCTC 2 cut(s) 344, 2982
BcuI ACTAGT 1 cut(s) 1588
BfaI CTAG 9 cut(s) 422, 1589, 1769, 2229, 2268, 2361, 2660, 2904, 3119
BfmI CTRYAG 6 cut(s) 918, 1995, 2196, 3632, 3791, 3923
BfuAI ACCTGC 2 cut(s) 2906, 3733
BglII AGATCT 3 cut(s) 2861, 2906, 3307
BmcAI AGTACT 1 cut(s) 2968
Bme1390I CCNGG 3 cut(s) 195, 2687, 2994
Bme18I GGWCC 4 cut(s) 1684, 2700, 3095, 3176
BmeT110I CYCGRG 1 cut(s) 2865
BmgT120I GGNCC 6 cut(s) 1684, 2689, 2700, 3095, 3176, 3978
BmiI GGNNCC 4 cut(s) 474, 1685, 2553, 2763
BmrFI CCNGG 3 cut(s) 195, 2687, 2994
BmsI GCATC 9 cut(s) 897, 1171, 1831, 2531, 3305, 3392, 3472, 3719, 3814
BpiI GAAGAC 2 cut(s) 2816, 3921
BpmI CTGGAG 1 cut(s) 2802
Bpu10I CCTNAGC 4 cut(s) 2492, 3537, 3810, 3942
BpuEI CTTGAG 2 cut(s) 2964, 3916
BpuMI CCSGG 1 cut(s) 2994
Bsa29I ATCGAT 1 cut(s) 3407
BsaBI GATNNNNATC 2 cut(s) 1161, 1743
BsaHI GRCGYC 1 cut(s) 4033
BsaI GGTCTC 1 cut(s) 2982
BsaJI CCNNGG 5 cut(s) 1687, 2507, 2685, 2686, 3426
BsaWI WCCGGW 4 cut(s) 142, 329, 1240, 3205
BsaXI ACNNNNNCTCC 4 cut(s) 464, 494, 3967, 3997
Bsc4I CCNNNNNNNGG 4 cut(s) 336, 1247, 2687, 3910
Bse118I RCCGGY 2 cut(s) 142, 3205
Bse1I ACTGG 3 cut(s) 2585, 2785, 3585
Bse3DI GCAATG 5 cut(s) 54, 137, 290, 3419, 3608
Bse8I GATNNNNATC 2 cut(s) 1161, 1743
BseAI TCCGGA 1 cut(s) 329
BseBI CCWGG 2 cut(s) 195, 2687
BseCI ATCGAT 1 cut(s) 3407
BseDI CCNNGG 5 cut(s) 1687, 2507, 2685, 2686, 3426
BseGI GGATG 6 cut(s) 194, 326, 2301, 3532, 3589, 3805
BseJI GATNNNNATC 2 cut(s) 1161, 1743
BseLI CCNNNNNNNGG 4 cut(s) 336, 1247, 2687, 3910
BseMI GCAATG 5 cut(s) 54, 137, 290, 3419, 3608
BseNI ACTGG 3 cut(s) 2585, 2785, 3585
BseRI GAGGAG 2 cut(s) 251, 2211
BseYI CCCAGC 2 cut(s) 2072, 2766
BsgI GTGCAG 2 cut(s) 570, 2351
BshFI GGCC 9 cut(s) 2081, 2691, 2832, 3471, 3481, 3565, 3667, 3838, 3979
BshTI ACCGGT 2 cut(s) 142, 3205
BshVI ATCGAT 1 cut(s) 3407
BsiHKAI GWGCWC 1 cut(s) 3435
BsiHKCI CYCGRG 1 cut(s) 2865
BsiSI CCGG 7 cut(s) 143, 330, 470, 1241, 2468, 2993, 3206
BslFI GGGAC 1 cut(s) 1697
BslI CCNNNNNNNGG 4 cut(s) 336, 1247, 2687, 3910
BsmAI GTCTC 2 cut(s) 344, 2982
BsmFI GGGAC 1 cut(s) 1697
BsnI GGCC 9 cut(s) 2081, 2691, 2832, 3471, 3481, 3565, 3667, 3838, 3979
Bso31I GGTCTC 1 cut(s) 2982
BsoBI CYCGRG 1 cut(s) 2865
Bsp1286I GDGCHC 1 cut(s) 3435
Bsp13I TCCGGA 1 cut(s) 329
Bsp19I CCATGG 2 cut(s) 1687, 2507
BspACI CCGC 3 cut(s) 2698, 3055, 3880
BspANI GGCC 9 cut(s) 2081, 2691, 2832, 3471, 3481, 3565, 3667, 3838, 3979
BspDI ATCGAT 1 cut(s) 3407
BspEI TCCGGA 1 cut(s) 329
BspHI TCATGA 1 cut(s) 1636
BspLI GGNNCC 4 cut(s) 474, 1685, 2553, 2763
BspMAI CTGCAG 5 cut(s) 922, 2200, 3636, 3795, 3927
BspMI ACCTGC 2 cut(s) 2906, 3733
BspPI GGATC 7 cut(s) 210, 1321, 2056, 2355, 2576, 2756, 2769
BspQI GCTCTTC 2 cut(s) 708, 804
BspTNI GGTCTC 1 cut(s) 2982
BsrDI GCAATG 5 cut(s) 54, 137, 290, 3419, 3608
BsrFI RCCGGY 2 cut(s) 142, 3205
BsrI ACTGG 3 cut(s) 2585, 2785, 3585
BssAI RCCGGY 2 cut(s) 142, 3205
BssECI CCNNGG 5 cut(s) 1687, 2507, 2685, 2686, 3426
BssNI GRCGYC 1 cut(s) 4033
BssT1I CCWWGG 2 cut(s) 1687, 2507
Bst2UI CCWGG 2 cut(s) 195, 2687
Bst4CI ACNGT 7 cut(s) 480, 1499, 1733, 1887, 2561, 2649, 3750
Bst6I CTCTTC 4 cut(s) 342, 708, 726, 804
BstACI GRCGYC 1 cut(s) 4033
BstAPI GCANNNNNTGC 2 cut(s) 53, 2239
BstC8I GCNNGC 2 cut(s) 3615, 4043
BstDSI CCRYGG 2 cut(s) 1687, 2507
BstEII GGTNACC 1 cut(s) 1642
BstF5I GGATG 6 cut(s) 194, 326, 2301, 3532, 3589, 3805
BstMAI GTCTC 2 cut(s) 344, 2982
BstNI CCWGG 2 cut(s) 195, 2687
BstNSI RCATGY 4 cut(s) 74, 564, 960, 3165
BstPI GGTNACC 1 cut(s) 1642
BstSCI CCNGG 3 cut(s) 193, 2685, 2992
BstSFI CTRYAG 6 cut(s) 918, 1995, 2196, 3632, 3791, 3923
BstV2I GAAGAC 2 cut(s) 2816, 3921
BstX2I RGATCY 7 cut(s) 1313, 2347, 2581, 2761, 2861, 2906, 3307
BstXI CCANNNNNNTGG 1 cut(s) 644
BstYI RGATCY 7 cut(s) 1313, 2347, 2581, 2761, 2861, 2906, 3307
Bsu15I ATCGAT 1 cut(s) 3407
BsuRI GGCC 9 cut(s) 2081, 2691, 2832, 3471, 3481, 3565, 3667, 3838, 3979
BsuTUI ATCGAT 1 cut(s) 3407
BtgI CCRYGG 2 cut(s) 1687, 2507
BtsCI GGATG 6 cut(s) 194, 326, 2301, 3532, 3589, 3805
BtsIMutI CAGTG 3 cut(s) 2778, 3306, 3999
BveI ACCTGC 2 cut(s) 2906, 3733
Cac8I GCNNGC 2 cut(s) 3615, 4043
CaiI CAGNNNCTG 3 cut(s) 2239, 3631, 3799
CciI TCATGA 1 cut(s) 1636
Cfr10I RCCGGY 2 cut(s) 142, 3205
Cfr13I GGNCC 6 cut(s) 1684, 2689, 2700, 3095, 3176, 3978
ClaI ATCGAT 1 cut(s) 3407
CseI GACGC 2 cut(s) 2308, 4022
Csp6I GTAC 8 cut(s) 1121, 1190, 1403, 1896, 2588, 2967, 3219, 3891
CspAI ACCGGT 2 cut(s) 142, 3205
CviQI GTAC 8 cut(s) 1121, 1190, 1403, 1896, 2588, 2967, 3219, 3891
DraI TTTAAA 1 cut(s) 3756
DrdI GACNNNNNNGTC 1 cut(s) 1257
DseDI GACNNNNNNGTC 1 cut(s) 1257
Eam1104I CTCTTC 4 cut(s) 342, 708, 726, 804
EarI CTCTTC 4 cut(s) 342, 708, 726, 804
Eco130I CCWWGG 2 cut(s) 1687, 2507
Eco147I AGGCCT 5 cut(s) 3471, 3481, 3565, 3667, 3838
Eco31I GGTCTC 1 cut(s) 2982
Eco32I GATATC 2 cut(s) 1745, 1813
Eco47I GGWCC 4 cut(s) 1684, 2700, 3095, 3176
Eco88I CYCGRG 1 cut(s) 2865
Eco91I GGTNACC 1 cut(s) 1642
EcoO109I RGGNCCY 1 cut(s) 3978
EcoO65I GGTNACC 1 cut(s) 1642
EcoRII CCWGG 2 cut(s) 193, 2685
EcoRV GATATC 2 cut(s) 1745, 1813
EcoT14I CCWWGG 2 cut(s) 1687, 2507
ErhI CCWWGG 2 cut(s) 1687, 2507
FaqI GGGAC 1 cut(s) 1697
FauI CCCGC 1 cut(s) 3048
FauNDI CATATG 1 cut(s) 3354
FbaI TGATCA 1 cut(s) 178
FokI GGATG 6 cut(s) 201, 313, 2308, 3519, 3596, 3792
FspBI CTAG 9 cut(s) 422, 1589, 1769, 2229, 2268, 2361, 2660, 2904, 3119
GsaI CCCAGC 2 cut(s) 2076, 2770
GsuI CTGGAG 1 cut(s) 2802
HaeIII GGCC 9 cut(s) 2081, 2691, 2832, 3471, 3481, 3565, 3667, 3838, 3979
HapII CCGG 7 cut(s) 143, 330, 470, 1241, 2468, 2993, 3206
HgaI GACGC 2 cut(s) 2308, 4022
Hin1I GRCGYC 1 cut(s) 4033
HincII GTYRAC 3 cut(s) 6, 3236, 3489
HindII GTYRAC 3 cut(s) 6, 3236, 3489
HinfI GANTC 9 cut(s) 1270, 2168, 2429, 2528, 2711, 2755, 3763, 3850, 4018
HpaI GTTAAC 1 cut(s) 6
HpaII CCGG 7 cut(s) 143, 330, 470, 1241, 2468, 2993, 3206
HpyCH4III ACNGT 7 cut(s) 480, 1499, 1733, 1887, 2561, 2649, 3750
HpyCH4IV ACGT 2 cut(s) 2503, 3364
HpySE526I ACGT 2 cut(s) 2503, 3364
Hsp92I GRCGYC 1 cut(s) 4033
Kpn2I TCCGGA 1 cut(s) 329
Ksp22I TGATCA 1 cut(s) 178
KspAI GTTAAC 1 cut(s) 6
LguI GCTCTTC 2 cut(s) 708, 804
LmnI GCTCC 6 cut(s) 21, 400, 472, 2566, 3430, 3733
LweI GCATC 9 cut(s) 897, 1171, 1831, 2531, 3305, 3392, 3472, 3719, 3814
MaeI CTAG 9 cut(s) 422, 1589, 1769, 2229, 2268, 2361, 2660, 2904, 3119
MaeII ACGT 2 cut(s) 2503, 3364
MfeI CAATTG 1 cut(s) 2421
MflI RGATCY 7 cut(s) 1313, 2347, 2581, 2761, 2861, 2906, 3307
MhlI GDGCHC 1 cut(s) 3435
MlyI GAGTC 2 cut(s) 2177, 4027
MmeI TCCRAC 2 cut(s) 2325, 3657
MroI TCCGGA 1 cut(s) 329
MroXI GAANNNNTTC 8 cut(s) 144, 417, 624, 801, 1179, 1269, 1482, 3309
MslI CAYNNNNRTG 3 cut(s) 3438, 3510, 3992
MspA1I CMGCKG 4 cut(s) 41, 2491, 3346, 3928
MspI CCGG 7 cut(s) 143, 330, 470, 1241, 2468, 2993, 3206
MspR9I CCNGG 3 cut(s) 195, 2687, 2994
MunI CAATTG 1 cut(s) 2421
MvaI CCWGG 2 cut(s) 195, 2687
NciI CCSGG 1 cut(s) 2994
NcoI CCATGG 2 cut(s) 1687, 2507
NdeI CATATG 1 cut(s) 3354
NlaIV GGNNCC 4 cut(s) 474, 1685, 2553, 2763
NmuCI GTSAC 8 cut(s) 373, 745, 1135, 1225, 1417, 1642, 1915, 2649
NspI RCATGY 4 cut(s) 74, 564, 960, 3165
PaeR7I CTCGAG 1 cut(s) 2865
PagI TCATGA 1 cut(s) 1636
PasI CCCWGGG 1 cut(s) 2686
PceI AGGCCT 5 cut(s) 3471, 3481, 3565, 3667, 3838
PciI ACATGT 3 cut(s) 70, 560, 956
PciSI GCTCTTC 2 cut(s) 708, 804
PdmI GAANNNNTTC 8 cut(s) 144, 417, 624, 801, 1179, 1269, 1482, 3309
PfeI GAWTC 7 cut(s) 1270, 2429, 2528, 2711, 2755, 3763, 3850
PinAI ACCGGT 2 cut(s) 142, 3205
PleI GAGTC 2 cut(s) 2176, 4026
PpsI GAGTC 2 cut(s) 2176, 4026
PscI ACATGT 3 cut(s) 70, 560, 956
Psp6I CCWGG 2 cut(s) 193, 2685
PspEI GGTNACC 1 cut(s) 1642
PspFI CCCAGC 2 cut(s) 2072, 2766
PspGI CCWGG 2 cut(s) 193, 2685
PspN4I GGNNCC 4 cut(s) 474, 1685, 2553, 2763
PspPI GGNCC 6 cut(s) 1684, 2689, 2700, 3095, 3176, 3978
PstI CTGCAG 5 cut(s) 922, 2200, 3636, 3795, 3927
PstNI CAGNNNCTG 3 cut(s) 2239, 3631, 3799
PsuI RGATCY 7 cut(s) 1313, 2347, 2581, 2761, 2861, 2906, 3307
PvuII CAGCTG 4 cut(s) 41, 2491, 3346, 3928
RsaI GTAC 8 cut(s) 1122, 1191, 1404, 1897, 2589, 2968, 3220, 3892
RsaNI GTAC 8 cut(s) 1121, 1190, 1403, 1896, 2588, 2967, 3219, 3891
RseI CAYNNNNRTG 3 cut(s) 3438, 3510, 3992
SapI GCTCTTC 2 cut(s) 708, 804
Sau96I GGNCC 6 cut(s) 1684, 2689, 2700, 3095, 3176, 3978
ScaI AGTACT 1 cut(s) 2968
SchI GAGTC 2 cut(s) 2177, 4027
ScrFI CCNGG 3 cut(s) 195, 2687, 2994
SduI GDGCHC 1 cut(s) 3435
SfaNI GCATC 9 cut(s) 897, 1171, 1831, 2531, 3305, 3392, 3472, 3719, 3814
SfcI CTRYAG 6 cut(s) 918, 1995, 2196, 3632, 3791, 3923
Sfr274I CTCGAG 1 cut(s) 2865
SinI GGWCC 4 cut(s) 1684, 2700, 3095, 3176
SlaI CTCGAG 1 cut(s) 2865
SmiMI CAYNNNNRTG 3 cut(s) 3438, 3510, 3992
SmlI CTYRAG 3 cut(s) 2865, 2979, 3895
SmoI CTYRAG 3 cut(s) 2865, 2979, 3895
SpeI ACTAGT 1 cut(s) 1588
SseBI AGGCCT 5 cut(s) 3471, 3481, 3565, 3667, 3838
SsiI CCGC 3 cut(s) 2698, 3055, 3880
SspI AATATT 1 cut(s) 1000
SspMI CTAG 9 cut(s) 422, 1589, 1769, 2229, 2268, 2361, 2660, 2904, 3119
StuI AGGCCT 5 cut(s) 3471, 3481, 3565, 3667, 3838
StyD4I CCNGG 3 cut(s) 193, 2685, 2992
StyI CCWWGG 2 cut(s) 1687, 2507
TaaI ACNGT 7 cut(s) 480, 1499, 1733, 1887, 2561, 2649, 3750
TaiI ACGT 2 cut(s) 2506, 3367
TaqI TCGA 9 cut(s) 136, 148, 409, 1261, 2546, 2866, 3017, 3407, 3841
TaqII GACCGA 1 cut(s) 1154
TatI WGTACW 6 cut(s) 1120, 1402, 1895, 2587, 2966, 3218
TauI GCSGC 1 cut(s) 3882
TfiI GAWTC 7 cut(s) 1270, 2429, 2528, 2711, 2755, 3763, 3850
TscAI CASTG 3 cut(s) 2785, 3306, 3999
TseFI GTSAC 8 cut(s) 373, 745, 1135, 1225, 1417, 1642, 1915, 2649
Tsp45I GTSAC 8 cut(s) 373, 745, 1135, 1225, 1417, 1642, 1915, 2649
TspGWI ACGGA 1 cut(s) 3490
TspRI CASTG 3 cut(s) 2785, 3306, 3999
VpaK11BI GGWCC 4 cut(s) 1684, 2700, 3095, 3176
XapI RAATTY 5 cut(s) 797, 1373, 1950, 2874, 3004
XbaI TCTAGA 1 cut(s) 421
XceI RCATGY 4 cut(s) 74, 564, 960, 3165
XhoI CTCGAG 1 cut(s) 2865
XmnI GAANNNNTTC 8 cut(s) 144, 417, 624, 801, 1179, 1269, 1482, 3309
XspI CTAG 9 cut(s) 422, 1589, 1769, 2229, 2268, 2361, 2660, 2904, 3119
ZrmI AGTACT 1 cut(s) 2968
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.