Rh7DG235500

Domain in histone families 1 and 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000827
Physical Location & Seq
Forward (+)
23406442 .. 23409987
3546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG235500.1

Sequence Viewer

Length: 2805 bp
ATGAAATTGATGACGACAACATGTAAGCTGCTGGAAAACAACGTTAAGGTGCAGGGAAAGATGCAGAAGCTGCTGGAAAATAACATTAAGGTGCAGGAAAAGACACATAAGCTGCTGGAAAATAACATTAAGGTGCAGGAAAAGACACTTCAGGTTCAGGAAAAGTTGTTTGAGCTGTTGAAGGAGTTAGCAGATACCATTCGAAATCCTGTTATAGAAAAAAGATCAATGCCAATCATTGGTCCTTGTGGAGAGAGGGAATATATAGATTGTGGATTTCCAGCAAAACAGAAGCACCAACCTGAGATCTCAGCTCAAACAAAAGCATTGGGATCCCAGCTGAATGAAATGCTAGCATCTCTTGAACTACCCATGGACGCAGCAGAGTTATTTTTAAAGCAGGGAAAGCTATGCAACCTTGGTCAGCAACAAGTACCTAAGGGCCAGAACAAATCAATTAAGAATATGCCTGATGCTGAACAACCTCAACAACAGGAGATTGGAAATTCAGAATTGTTGCGGGAACTGCCAACAATGGAAGAAGAGAATGAAGAATTATCTGGACCTGATAGAAAGAGAATTCGTTTAAGCATTGAAGCAAATCATGAGAAAGAAAAGCAACTGCAAGTGCATAATGCTGAAGGCCATCCTGATCTTCGTAGTCAAGAGAAGCCGTCTGTATCTGTGCTAGTCCCAAGTTTTCCAGATGTCTTCTTGCACTCGCCAAACTATGAGCGGGGGACCCAGCAACCAAAAGTTCAAAAGACAGAAAGACCTCGTGAAATCAAATTGCTGTCAGTGGAGGGAGGAATTATTGCTCATGTATCCAGGACAAACCTTATAGAATCTTCTGTTGATTTGCTTCAGGAAGAACAGGAGATTGTTCCTGAGCTAACATATCAAGAAAACCTTCAAGAGCAAGAGCAAGAAATGCAGTCATTTAGTCACAAGAAGCATCAACAAGCTATTCTTTCTGATGTGGTGAAGACGCCTGATTTCCTATTAGCAACTGGTGCGGAGCAGGAAGCAGAAAATGTGATTAAAGACAAGGATGTTGAGCTTGATCTGACAGCAAGTGACCAATCTTGTCGAACACAACCTGAGCAAAAGCAGCAGCAGAGGCAACTAGGTCTTCCGGGTAAACAACCATCTGAATCTTATTGTGAAGGAGCAGAGGCATCTAAATATCAGGATGAAGACCATCAGCCAGAAAATGTGATTAAGGAGAAGGCTGTACAGTCAAGTCACCTGAGTCTTGAATTGACAGCAAGTGAGCAATCCAGTCAAAGACAATTGGAGAAACAGCAGCAACAACCGCAGAGGCGATTACGTCCTCGAGGTAAAAAGTCAGCTGAGTCTGATTGTGGAGTGGCAACGGCACCTGAATGCCAGCAGGAGCAGCAGCCCAGATATCCAATGCAGGAAAGAATGAAGCTTGATCAGAAACCAGCAGGGCAGAGTCAATTGAGCCCATGGTGCCAGAGGCACTCTGAGTCTGAACTGTCTCTCACTACATCTATGGTTGAATTATCACCAAGAAAAAGTCAGGATACTGAAAGTCAGACAGAGGAAAAGACTCGAGAGCTGAAGACATCAGCAGAGGAAACAGGCCAAAGACAGCTCCAGCAGAGGCAGCTTCGAACAAGAAGCAAAAACCTGTCTGAATTCAAGCAAACATCACTTTCAAATACTGGAATGTCACAAGTGGATAAGCCAGGAGCCGAAGATTCGTCTCAACTGAAAAGGCAGCCTCAAGTGGAAAAGCCTGGAGTTGGAGATCCATCTCAACTGAAGAAGAAGCAAGTTAACCGCTTAAATAAGCGACAGTGGTGCACTCCAGAGCCCACAACAATGCCCAACGCCATTGGTGCAATCGTCACTTACCAGAGACGGTCAAGTCAAACTATAGAGCCCAACCCTGAAGCATTTCAGGATCTAGGACCAACACTCGCAGACCATTTGGAGCAAAAAGAGAATCATCATGGTCAACGAAAGAAGTTCAAATCAGCAAAAGAAAGTCCTGATGAGTTGGCTCTCACTTCCCAGCATCTTGTGGTGGATCCTCACATTCTAGTAAAGCCTCCACTGCTCAATCCAGCTGCAGTGGGACAATTGCCTCAAACAACAAAAGAGCTGCCGCAGAAACAGCAGCTGCTGCACCATATGAAACTGCGCTCATGCAGCCAAGCTGCATCGCAATCTGAACCTGATGTTTTGATTGTGGGACTATTGCCTCAAACAACAAAAGAGCTGCCACAGAAACAGTTGCTGCGCCATATGAAACTACACTCACGCAGCCAAGCTGCATCGCAATCTGAACCCGATGTTTCGATGATTGATACGTTGCCCGCAGAGCACCATTCTGAGCAGCCACAAGAACAGAAGCATCCTAAGTGGCCACAGAAGCAAAGAGGGAGGACTCCTAAACCAAAACTGGACAGAGCTGGGCCTGTTAAGCGTCAACAGCTGCAGGAACAACCAAAAAGACGAGGGAGGCCCCCTAAGTTGGATGTAAATACTATATCAGGGAGAAAATTGATCTCAAAGAACAAACAGAAGCAACCAAAGAGTCCAGGGAAGGCAAAATCTCGAAAAGTGATCAAAGGAAAACTACAGAGTCAAGTGAGGGGAAAGCCTCAAAAAGTGACTCAAGGAACACCAAAGAGTCAAGTGAGGGGAAAGCCTCAAAAAGTGACTCAAGGAACACCAAAGAGTCAAGTGAGGGGAAGGCTTCAAAAAATGTCTGAAGAAACAGTAAAGAGTCAAGTTAGGGAGAGGGCTCGAGAAGTGACTGAAGGAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Linker_histone

Protein Analysis

934

Amino Acids

105.88

Weight (kDa)

9.24

Isoelectric Point (pI)

65.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1896
AbsI CCTCGAGG 1 cut(s) 1335
AccB1I GGYRCC 2 cut(s) 1378, 1476
AccB7I CCANNNNNTGG 1 cut(s) 239
AccBSI CCGCTC 1 cut(s) 736
AciI CCGC 7 cut(s) 520, 736, 1016, 1316, 1810, 2138, 2349
AclI AACGTT 1 cut(s) 42
AclWI GGATC 6 cut(s) 327, 340, 1772, 1941, 2054, 2067
AcoI YGGCCR 1 cut(s) 2396
AcsI RAATTY 3 cut(s) 505, 579, 1664
AcuI CTGAAG 7 cut(s) 134, 660, 848, 1607, 1811, 1941, 2766
AcyI GRCGYC 1 cut(s) 989
AfaI GTAC 2 cut(s) 435, 1236
AfiI CCNNNNNNNGG 3 cut(s) 239, 1772, 2506
AflIII ACRYGT 1 cut(s) 20
AjnI CCWGG 4 cut(s) 827, 1714, 1765, 2572
Alw21I GWGCWC 2 cut(s) 1835, 2358
Alw26I GTCTC 3 cut(s) 1509, 1737, 1882
Alw44I GTGCAC 1 cut(s) 1831
AlwI GGATC 6 cut(s) 327, 340, 1772, 1941, 2054, 2067
AlwNI CAGNNNCTG 4 cut(s) 70, 2152, 2155, 2269
Ama87I CYCGRG 3 cut(s) 1335, 1578, 2781
AoxI GGCC 6 cut(s) 442, 643, 1609, 2396, 2447, 2495
ApaLI GTGCAC 1 cut(s) 1831
ApoI RAATTY 3 cut(s) 505, 579, 1664
Asp700I GAANNNNTTC 2 cut(s) 909, 1926
AspLEI GCGC 2 cut(s) 2175, 2274
AspS9I GGNCC 7 cut(s) 242, 442, 563, 741, 1940, 2447, 2496
AsuC2I CCSGG 1 cut(s) 1137
AsuHPI GGTGA 3 cut(s) 994, 1238, 1524
AsuII TTCGAA 2 cut(s) 202, 1639
AsuNHI GCTAGC 1 cut(s) 352
AvaI CYCGRG 3 cut(s) 1335, 1578, 2781
AvaII GGWCC 4 cut(s) 242, 563, 741, 1940
AxyI CCTNAGG 1 cut(s) 438
BaeGI GKGCMC 1 cut(s) 1835
BalI TGGCCA 1 cut(s) 2398
BamHI GGATCC 2 cut(s) 332, 2059
BanI GGYRCC 2 cut(s) 1378, 1476
BanII GRGCYC 4 cut(s) 1472, 1845, 1914, 2782
BauI CACGAG 1 cut(s) 777
BbsI GAAGAC 5 cut(s) 703, 992, 1124, 1203, 1595
Bbv12I GWGCWC 2 cut(s) 1835, 2358
BccI CCATC 4 cut(s) 654, 1156, 1209, 1789
BceAI ACGGC 2 cut(s) 658, 1392
BcgI CGANNNNNNTGC 2 cut(s) 1812, 1846
BciT130I CCWGG 4 cut(s) 829, 1716, 1767, 2574
BciVI GTATCC 2 cut(s) 835, 1543
BclI TGATCA 2 cut(s) 1438, 2598
BcnI CCSGG 1 cut(s) 1137
BcoDI GTCTC 3 cut(s) 1509, 1737, 1882
BfaI CTAG 5 cut(s) 353, 689, 1127, 1937, 2072
BfmI CTRYAG 4 cut(s) 1905, 2100, 2468, 2612
BfuI GTATCC 2 cut(s) 835, 1543
BglII AGATCT 1 cut(s) 306
Bme1390I CCNGG 5 cut(s) 829, 1137, 1716, 1767, 2574
Bme18I GGWCC 4 cut(s) 242, 563, 741, 1940
BmeT110I CYCGRG 3 cut(s) 1335, 1578, 2781
BmgT120I GGNCC 7 cut(s) 242, 442, 563, 741, 1940, 2447, 2496
BmiI GGNNCC 9 cut(s) 334, 742, 743, 1380, 1478, 1720, 2061, 2498, 2800
BmrFI CCNGG 5 cut(s) 829, 1137, 1716, 1767, 2574
BmsI GCATC 9 cut(s) 51, 365, 463, 964, 1187, 2056, 2201, 2315, 2395
BmtI GCTAGC 1 cut(s) 356
BpiI GAAGAC 5 cut(s) 703, 992, 1124, 1203, 1595
BpmI CTGGAG 3 cut(s) 1607, 1788, 1821
Bpu10I CCTNAGC 2 cut(s) 888, 1101
Bpu14I TTCGAA 2 cut(s) 202, 1639
BpuEI CTTGAG 3 cut(s) 1737, 2634, 2682
BpuMI CCSGG 1 cut(s) 1137
BsaHI GRCGYC 1 cut(s) 989
BsaJI CCNNGG 4 cut(s) 372, 418, 1472, 2573
Bsc4I CCNNNNNNNGG 3 cut(s) 239, 1772, 2506
Bse1I ACTGG 4 cut(s) 1015, 1281, 1696, 2439
Bse21I CCTNAGG 1 cut(s) 438
BseBI CCWGG 4 cut(s) 829, 1716, 1767, 2574
BseDI CCNNGG 4 cut(s) 372, 418, 1472, 2573
BseGI GGATG 5 cut(s) 646, 1057, 1198, 2386, 2515
BseLI CCNNNNNNNGG 3 cut(s) 239, 1772, 2506
BseMII CTCAG 8 cut(s) 294, 324, 879, 1092, 1241, 1344, 1482, 2355
BseNI ACTGG 4 cut(s) 1015, 1281, 1696, 2439
BseSI GKGCMC 1 cut(s) 1835
BseYI CCCAGC 4 cut(s) 336, 744, 2043, 2444
BsgI GTGCAG 4 cut(s) 71, 113, 155, 2141
BshFI GGCC 6 cut(s) 444, 645, 1611, 2398, 2449, 2497
BshNI GGYRCC 2 cut(s) 1378, 1476
BsiHKAI GWGCWC 2 cut(s) 1835, 2358
BsiHKCI CYCGRG 3 cut(s) 1335, 1578, 2781
BsiSI CCGG 1 cut(s) 1136
BslFI GGGAC 4 cut(s) 677, 754, 2121, 2238
BslI CCNNNNNNNGG 3 cut(s) 239, 1772, 2506
BsmAI GTCTC 3 cut(s) 1509, 1737, 1882
BsmBI CGTCTC 2 cut(s) 1737, 1882
BsmFI GGGAC 4 cut(s) 677, 754, 2121, 2238
BsmI GAATGC 1 cut(s) 1391
BsnI GGCC 6 cut(s) 444, 645, 1611, 2398, 2449, 2497
BsoBI CYCGRG 3 cut(s) 1335, 1578, 2781
Bsp119I TTCGAA 2 cut(s) 202, 1639
Bsp1286I GDGCHC 6 cut(s) 1472, 1835, 1845, 1914, 2358, 2782
Bsp1407I TGTACA 1 cut(s) 1234
Bsp19I CCATGG 2 cut(s) 372, 1472
BspACI CCGC 7 cut(s) 520, 736, 1016, 1316, 1810, 2138, 2349
BspANI GGCC 6 cut(s) 444, 645, 1611, 2398, 2449, 2497
BspCNI CTCAG 8 cut(s) 295, 323, 880, 1093, 1242, 1345, 1483, 2356
BspHI TCATGA 1 cut(s) 604
BspLI GGNNCC 9 cut(s) 334, 742, 743, 1380, 1478, 1720, 2061, 2498, 2800
BspMAI CTGCAG 2 cut(s) 2104, 2472
BspOI GCTAGC 1 cut(s) 356
BspPI GGATC 6 cut(s) 327, 340, 1772, 1941, 2054, 2067
BspT104I TTCGAA 2 cut(s) 202, 1639
BspT107I GGYRCC 2 cut(s) 1378, 1476
BsrBI CCGCTC 1 cut(s) 736
BsrGI TGTACA 1 cut(s) 1234
BsrI ACTGG 4 cut(s) 1015, 1281, 1696, 2439
BssECI CCNNGG 4 cut(s) 372, 418, 1472, 2573
BssNI GRCGYC 1 cut(s) 989
BssSI CACGAG 1 cut(s) 777
BssT1I CCWWGG 3 cut(s) 372, 418, 1472
Bst2BI CACGAG 1 cut(s) 777
Bst2UI CCWGG 4 cut(s) 829, 1716, 1767, 2574
Bst4CI ACNGT 6 cut(s) 1239, 1503, 1827, 1893, 2265, 2755
Bst6I CTCTTC 1 cut(s) 537
BstACI GRCGYC 1 cut(s) 989
BstAPI GCANNNNNTGC 4 cut(s) 70, 931, 1013, 2155
BstAUI TGTACA 1 cut(s) 1234
BstBI TTCGAA 2 cut(s) 202, 1639
BstC8I GCNNGC 3 cut(s) 354, 1391, 2349
BstDSI CCRYGG 2 cut(s) 372, 1472
BstF5I GGATG 5 cut(s) 646, 1057, 1198, 2386, 2515
BstHHI GCGC 2 cut(s) 2175, 2274
BstMAI GTCTC 3 cut(s) 1509, 1737, 1882
BstNI CCWGG 4 cut(s) 829, 1716, 1767, 2574
BstNSI RCATGY 1 cut(s) 24
BstSCI CCNGG 5 cut(s) 827, 1135, 1714, 1765, 2572
BstSFI CTRYAG 4 cut(s) 1905, 2100, 2468, 2612
BstSLI GKGCMC 1 cut(s) 1835
BstV2I GAAGAC 5 cut(s) 703, 992, 1124, 1203, 1595
BstX2I RGATCY 5 cut(s) 306, 332, 1777, 1933, 2059
BstYI RGATCY 5 cut(s) 306, 332, 1777, 1933, 2059
Bsu36I CCTNAGG 1 cut(s) 438
BsuI GTATCC 2 cut(s) 835, 1543
BsuRI GGCC 6 cut(s) 444, 645, 1611, 2398, 2449, 2497
BtgI CCRYGG 2 cut(s) 372, 1472
BtgZI GCGATG 2 cut(s) 2178, 2292
BtsCI GGATG 5 cut(s) 646, 1057, 1198, 2386, 2515
BtsI GCAGTG 2 cut(s) 2084, 2109
BtsIMutI CAGTG 4 cut(s) 804, 1832, 2084, 2109
Cac8I GCNNGC 3 cut(s) 354, 1391, 2349
CaiI CAGNNNCTG 4 cut(s) 70, 2152, 2155, 2269
CciI TCATGA 1 cut(s) 604
CfoI GCGC 2 cut(s) 2175, 2274
Cfr13I GGNCC 7 cut(s) 242, 442, 563, 741, 1940, 2447, 2496
CseI GACGC 3 cut(s) 386, 997, 2447
Csp6I GTAC 2 cut(s) 434, 1235
CviAII CATG 7 cut(s) 21, 373, 605, 821, 1473, 1982, 2178
CviQI GTAC 2 cut(s) 434, 1235
DraI TTTAAA 1 cut(s) 396
DrdI GACNNNNNNGTC 1 cut(s) 1896
DseDI GACNNNNNNGTC 1 cut(s) 1896
EaeI YGGCCR 1 cut(s) 2396
Eam1104I CTCTTC 1 cut(s) 537
EarI CTCTTC 1 cut(s) 537
Eco130I CCWWGG 3 cut(s) 372, 418, 1472
Eco24I GRGCYC 4 cut(s) 1472, 1845, 1914, 2782
Eco32I GATATC 1 cut(s) 1412
Eco47I GGWCC 4 cut(s) 242, 563, 741, 1940
Eco57I CTGAAG 7 cut(s) 134, 660, 848, 1607, 1811, 1941, 2766
Eco81I CCTNAGG 1 cut(s) 438
Eco88I CYCGRG 3 cut(s) 1335, 1578, 2781
EcoO109I RGGNCCY 2 cut(s) 741, 2496
EcoRI GAATTC 2 cut(s) 579, 1664
EcoRII CCWGG 4 cut(s) 827, 1714, 1765, 2572
EcoRV GATATC 1 cut(s) 1412
EcoT14I CCWWGG 3 cut(s) 372, 418, 1472
EcoT38I GRGCYC 4 cut(s) 1472, 1845, 1914, 2782
ErhI CCWWGG 3 cut(s) 372, 418, 1472
Esp3I CGTCTC 2 cut(s) 1737, 1882
FaeI CATG 7 cut(s) 24, 376, 608, 824, 1476, 1985, 2181
FalI AAGNNNNNCTT 4 cut(s) 894, 926, 954, 986
FaqI GGGAC 4 cut(s) 677, 754, 2121, 2238
FatI CATG 7 cut(s) 20, 372, 604, 820, 1472, 1981, 2177
FauI CCCGC 3 cut(s) 513, 729, 2356
FauNDI CATATG 2 cut(s) 2163, 2277
FbaI TGATCA 2 cut(s) 1438, 2598
FokI GGATG 5 cut(s) 633, 1064, 1205, 2373, 2522
FriOI GRGCYC 4 cut(s) 1472, 1845, 1914, 2782
FspBI CTAG 5 cut(s) 353, 689, 1127, 1937, 2072
GlaI GCGC 2 cut(s) 2174, 2273
GsaI CCCAGC 4 cut(s) 340, 748, 2047, 2448
GsuI CTGGAG 3 cut(s) 1607, 1788, 1821
HaeIII GGCC 6 cut(s) 444, 645, 1611, 2398, 2449, 2497
HapII CCGG 1 cut(s) 1136
HgaI GACGC 3 cut(s) 386, 997, 2447
HhaI GCGC 2 cut(s) 2175, 2274
Hin1I GRCGYC 1 cut(s) 989
Hin1II CATG 7 cut(s) 24, 376, 608, 824, 1476, 1985, 2181
Hin6I GCGC 2 cut(s) 2173, 2272
HinP1I GCGC 2 cut(s) 2173, 2272
HincII GTYRAC 3 cut(s) 1807, 1988, 2462
HindII GTYRAC 3 cut(s) 1807, 1988, 2462
HindIII AAGCTT 1 cut(s) 1433
HpaI GTTAAC 1 cut(s) 1807
HpaII CCGG 1 cut(s) 1136
HphI GGTGA 3 cut(s) 994, 1238, 1524
Hpy166II GTNNAC 5 cut(s) 1142, 1807, 1833, 1988, 2462
Hpy8I GTNNAC 5 cut(s) 1142, 1807, 1833, 1988, 2462
HpyAV CCTTC 8 cut(s) 175, 635, 920, 1160, 1222, 2572, 2721, 2789
HpyCH4III ACNGT 6 cut(s) 1239, 1503, 1827, 1893, 2265, 2755
HpyCH4IV ACGT 3 cut(s) 42, 1330, 2342
HpySE526I ACGT 3 cut(s) 42, 1330, 2342
Hsp92I GRCGYC 1 cut(s) 989
Hsp92II CATG 7 cut(s) 24, 376, 608, 824, 1476, 1985, 2181
HspAI GCGC 2 cut(s) 2173, 2272
KflI GGGWCCC 1 cut(s) 741
Ksp22I TGATCA 2 cut(s) 1438, 2598
KspAI GTTAAC 1 cut(s) 1807
LmnI GCTCC 6 cut(s) 1018, 1169, 1396, 1626, 1718, 1963
LweI GCATC 9 cut(s) 51, 365, 463, 964, 1187, 2056, 2201, 2315, 2395
MaeI CTAG 5 cut(s) 353, 689, 1127, 1937, 2072
MaeII ACGT 3 cut(s) 42, 1330, 2342
MaeIII GTNAC 8 cut(s) 944, 1076, 1244, 1698, 1876, 2644, 2692, 2788
MbiI CCGCTC 1 cut(s) 736
MfeI CAATTG 3 cut(s) 1292, 1463, 2111
MflI RGATCY 5 cut(s) 306, 332, 1777, 1933, 2059
MhlI GDGCHC 6 cut(s) 1472, 1835, 1845, 1914, 2358, 2782
MlsI TGGCCA 1 cut(s) 2398
MluNI TGGCCA 1 cut(s) 2398
MmeI TCCRAC 2 cut(s) 1753, 2487
Mox20I TGGCCA 1 cut(s) 2398
MroXI GAANNNNTTC 2 cut(s) 909, 1926
MscI TGGCCA 1 cut(s) 2398
MslI CAYNNNNRTG 4 cut(s) 89, 131, 1384, 1850
Msp20I TGGCCA 1 cut(s) 2398
MspA1I CMGCKG 5 cut(s) 340, 1352, 2099, 2152, 2467
MspI CCGG 1 cut(s) 1136
MspR9I CCNGG 5 cut(s) 829, 1137, 1716, 1767, 2574
MunI CAATTG 3 cut(s) 1292, 1463, 2111
Mva1269I GAATGC 1 cut(s) 1391
MvaI CCWGG 4 cut(s) 829, 1716, 1767, 2574
NciI CCSGG 1 cut(s) 1137
NcoI CCATGG 2 cut(s) 372, 1472
NdeI CATATG 2 cut(s) 2163, 2277
NheI GCTAGC 1 cut(s) 352
NlaIII CATG 7 cut(s) 24, 376, 608, 824, 1476, 1985, 2181
NlaIV GGNNCC 9 cut(s) 334, 742, 743, 1380, 1478, 1720, 2061, 2498, 2800
NmuCI GTSAC 8 cut(s) 944, 1076, 1244, 1698, 1876, 2644, 2692, 2788
NspI RCATGY 1 cut(s) 24
NspV TTCGAA 2 cut(s) 202, 1639
PaeR7I CTCGAG 3 cut(s) 1335, 1578, 2781
PagI TCATGA 1 cut(s) 604
PciI ACATGT 1 cut(s) 20
PctI GAATGC 1 cut(s) 1391
PdmI GAANNNNTTC 2 cut(s) 909, 1926
PfeI GAWTC 4 cut(s) 845, 1154, 1727, 1975
PflMI CCANNNNNTGG 1 cut(s) 239
PfoI TCCNGGA 1 cut(s) 827
PpuMI RGGWCCY 1 cut(s) 741
PscI ACATGT 1 cut(s) 20
Psp1406I AACGTT 1 cut(s) 42
Psp5II RGGWCCY 1 cut(s) 741
Psp6I CCWGG 4 cut(s) 827, 1714, 1765, 2572
PspFI CCCAGC 4 cut(s) 336, 744, 2043, 2444
PspGI CCWGG 4 cut(s) 827, 1714, 1765, 2572
PspN4I GGNNCC 9 cut(s) 334, 742, 743, 1380, 1478, 1720, 2061, 2498, 2800
PspPI GGNCC 7 cut(s) 242, 442, 563, 741, 1940, 2447, 2496
PspPPI RGGWCCY 1 cut(s) 741
PspXI VCTCGAGB 1 cut(s) 1335
PstI CTGCAG 2 cut(s) 2104, 2472
PstNI CAGNNNCTG 4 cut(s) 70, 2152, 2155, 2269
PsuI RGATCY 5 cut(s) 306, 332, 1777, 1933, 2059
PvuII CAGCTG 5 cut(s) 340, 1352, 2099, 2152, 2467
RsaI GTAC 2 cut(s) 435, 1236
RsaNI GTAC 2 cut(s) 434, 1235
RseI CAYNNNNRTG 4 cut(s) 89, 131, 1384, 1850
Sau96I GGNCC 7 cut(s) 242, 442, 563, 741, 1940, 2447, 2496
ScrFI CCNGG 5 cut(s) 829, 1137, 1716, 1767, 2574
SduI GDGCHC 6 cut(s) 1472, 1835, 1845, 1914, 2358, 2782
SfaNI GCATC 9 cut(s) 51, 365, 463, 964, 1187, 2056, 2201, 2315, 2395
SfcI CTRYAG 4 cut(s) 1905, 2100, 2468, 2612
Sfr274I CTCGAG 3 cut(s) 1335, 1578, 2781
SfuI TTCGAA 2 cut(s) 202, 1639
SinI GGWCC 4 cut(s) 242, 563, 741, 1940
SlaI CTCGAG 3 cut(s) 1335, 1578, 2781
SmiMI CAYNNNNRTG 4 cut(s) 89, 131, 1384, 1850
SmlI CTYRAG 6 cut(s) 1335, 1578, 1752, 2649, 2697, 2781
SmoI CTYRAG 6 cut(s) 1335, 1578, 1752, 2649, 2697, 2781
SsiI CCGC 7 cut(s) 520, 736, 1016, 1316, 1810, 2138, 2349
SspMI CTAG 5 cut(s) 353, 689, 1127, 1937, 2072
StyD4I CCNGG 5 cut(s) 827, 1135, 1714, 1765, 2572
StyI CCWWGG 3 cut(s) 372, 418, 1472
TaaI ACNGT 6 cut(s) 1239, 1503, 1827, 1893, 2265, 2755
TaiI ACGT 3 cut(s) 45, 1333, 2345
TaqI TCGA 8 cut(s) 202, 1090, 1336, 1579, 1639, 2330, 2590, 2782
TatI WGTACW 1 cut(s) 1234
TauI GCSGC 1 cut(s) 2140
TfiI GAWTC 4 cut(s) 845, 1154, 1727, 1975
TscAI CASTG 4 cut(s) 804, 1832, 2091, 2109
TseFI GTSAC 8 cut(s) 944, 1076, 1244, 1698, 1876, 2644, 2692, 2788
Tsp45I GTSAC 8 cut(s) 944, 1076, 1244, 1698, 1876, 2644, 2692, 2788
TspDTI ATGAA 7 cut(s) 17, 360, 564, 1209, 1445, 2180, 2294
TspRI CASTG 4 cut(s) 804, 1832, 2091, 2109
Van91I CCANNNNNTGG 1 cut(s) 239
VneI GTGCAC 1 cut(s) 1831
VpaK11BI GGWCC 4 cut(s) 242, 563, 741, 1940
XapI RAATTY 3 cut(s) 505, 579, 1664
XceI RCATGY 1 cut(s) 24
XhoI CTCGAG 3 cut(s) 1335, 1578, 2781
XmnI GAANNNNTTC 2 cut(s) 909, 1926
XspI CTAG 5 cut(s) 353, 689, 1127, 1937, 2072
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.