Rh7CG241500

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
OG0000827
Physical Location & Seq
Forward (+)
22576270 .. 22576482
213 bp
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UTR
Exon/CDS
Intron
Rh7CG241500.1

Sequence Viewer

Length: 213 bp
ATGGATAAGTTATCTCAACCGGTGGTGCAAAATACAGATCATCATGGTCAACAAAAGATGTTGAAATCCAAGCCAACAACAATGGCAGAAAGTCCACAGCTCAAGTCAGCATCAGTGGAAGATCTTCCTCAAACAGCAAAAGAGTTGCAACAGAAGAAGCTGTGCCATATATATGAACTTGCGTTCATGCAGCCAAGCTGCATCACAACCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

70

Amino Acids

7.9

Weight (kDa)

7.81

Isoelectric Point (pI)

63.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AgeI ACCGGT 1 cut(s) 19
AgsI TTSAA 1 cut(s) 64
AluBI AGCT 3 cut(s) 100, 160, 198
AluI AGCT 3 cut(s) 100, 160, 198
ApeKI GCWGC 2 cut(s) 190, 198
AsiGI ACCGGT 1 cut(s) 19
Asp700I GAANNNNTTC 1 cut(s) 123
BbvI GCAGC 2 cut(s) 185, 202
BglII AGATCT 1 cut(s) 121
BisI GCNGC 2 cut(s) 191, 199
BlsI GCNGC 2 cut(s) 192, 200
BmsI GCATC 1 cut(s) 119
BpuEI CTTGAG 1 cut(s) 86
BsaWI WCCGGW 1 cut(s) 19
Bse118I RCCGGY 1 cut(s) 19
BseXI GCAGC 2 cut(s) 185, 202
BshTI ACCGGT 1 cut(s) 19
BsiSI CCGG 1 cut(s) 20
Bsp143I GATC 2 cut(s) 37, 121
BsrFI RCCGGY 1 cut(s) 19
BssAI RCCGGY 1 cut(s) 19
BssMI GATC 2 cut(s) 37, 121
BstKTI GATC 2 cut(s) 40, 124
BstMBI GATC 2 cut(s) 37, 121
BstV1I GCAGC 2 cut(s) 185, 202
BstX2I RGATCY 1 cut(s) 121
BstYI RGATCY 1 cut(s) 121
BtsIMutI CAGTG 1 cut(s) 120
Cfr10I RCCGGY 1 cut(s) 19
CspAI ACCGGT 1 cut(s) 19
CviAII CATG 2 cut(s) 44, 187
CviJI RGCY 5 cut(s) 73, 100, 160, 193, 198
CviKI_1 RGCY 5 cut(s) 73, 100, 160, 193, 198
DpnI GATC 2 cut(s) 39, 123
DpnII GATC 2 cut(s) 37, 121
FaeI CATG 2 cut(s) 47, 190
FaiI YATR 6 cut(s) 45, 168, 170, 172, 174, 188
FatI CATG 2 cut(s) 43, 186
Fnu4HI GCNGC 2 cut(s) 191, 199
Fsp4HI GCNGC 2 cut(s) 191, 199
GluI GCNGC 2 cut(s) 191, 199
HapII CCGG 1 cut(s) 20
Hin1II CATG 2 cut(s) 47, 190
HincII GTYRAC 1 cut(s) 50
HindII GTYRAC 1 cut(s) 50
HpaII CCGG 1 cut(s) 20
Hpy166II GTNNAC 2 cut(s) 50, 95
Hpy8I GTNNAC 2 cut(s) 50, 95
HpyCH4V TGCA 4 cut(s) 28, 148, 190, 201
Hsp92II CATG 2 cut(s) 47, 190
Kzo9I GATC 2 cut(s) 37, 121
LpnPI CCDG 1 cut(s) 33
Lsp1109I GCAGC 2 cut(s) 185, 202
LweI GCATC 1 cut(s) 119
MalI GATC 2 cut(s) 39, 123
MboI GATC 2 cut(s) 37, 121
MboII GAAGA 3 cut(s) 116, 131, 166
MflI RGATCY 1 cut(s) 121
MnlI CCTC 1 cut(s) 138
MroXI GAANNNNTTC 1 cut(s) 123
MslI CAYNNNNRTG 1 cut(s) 171
MspI CCGG 1 cut(s) 20
NdeII GATC 2 cut(s) 37, 121
NlaIII CATG 2 cut(s) 47, 190
PdmI GAANNNNTTC 1 cut(s) 123
PinAI ACCGGT 1 cut(s) 19
PkrI GCNGC 2 cut(s) 192, 200
PsuI RGATCY 1 cut(s) 121
RseI CAYNNNNRTG 1 cut(s) 171
SatI GCNGC 2 cut(s) 191, 199
Sau3AI GATC 2 cut(s) 37, 121
SetI ASST 4 cut(s) 102, 162, 200, 212
SfaNI GCATC 1 cut(s) 119
SgeI CNNG 7 cut(s) 32, 56, 82, 115, 191, 199, 207
SmiMI CAYNNNNRTG 1 cut(s) 171
SmlI CTYRAG 1 cut(s) 101
SmoI CTYRAG 1 cut(s) 101
TscAI CASTG 1 cut(s) 120
TseI GCWGC 2 cut(s) 190, 198
TspDTI ATGAA 2 cut(s) 175, 189
TspRI CASTG 1 cut(s) 120
XmnI GAANNNNTTC 1 cut(s) 123
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.