Domain in histone families 1 and 5
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1209 |
| Acc16I | TGCGCA | 1 cut(s) | 932 |
| Acc36I | ACCTGC | 2 cut(s) | 2492, 3318 |
| AccIII | TCCGGA | 1 cut(s) | 281 |
| AciI | CCGC | 3 cut(s) | 560, 2284, 2641 |
| AclWI | GGATC | 7 cut(s) | 162, 1273, 1726, 1941, 2162, 2342, 2355 |
| AcsI | RAATTY | 5 cut(s) | 749, 1325, 1620, 2460, 2590 |
| AfaI | GTAC | 5 cut(s) | 1143, 1567, 2175, 2554, 2806 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 288, 2273 |
| AflIII | ACRYGT | 3 cut(s) | 22, 512, 908 |
| AgeI | ACCGGT | 2 cut(s) | 94, 2791 |
| AjiI | CACGTC | 1 cut(s) | 493 |
| AjnI | CCWGG | 1 cut(s) | 2271 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1999, 2031, 3262, 3294 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1002, 1034 |
| Alw21I | GWGCWC | 1 cut(s) | 3021 |
| Alw26I | GTCTC | 2 cut(s) | 296, 2568 |
| AlwI | GGATC | 7 cut(s) | 162, 1273, 1726, 1941, 2162, 2342, 2355 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1825, 3217 |
| Ama87I | CYCGRG | 1 cut(s) | 2451 |
| Aor13HI | TCCGGA | 1 cut(s) | 281 |
| AoxI | GGCC | 7 cut(s) | 557, 2275, 2416, 3055, 3065, 3149, 3251 |
| ApoI | RAATTY | 5 cut(s) | 749, 1325, 1620, 2460, 2590 |
| AsiGI | ACCGGT | 2 cut(s) | 94, 2791 |
| Asp700I | GAANNNNTTC | 7 cut(s) | 96, 369, 576, 753, 1131, 1221, 2895 |
| AspLEI | GCGC | 1 cut(s) | 933 |
| AspS9I | GGNCC | 4 cut(s) | 2275, 2286, 2681, 2762 |
| AsuC2I | CCSGG | 1 cut(s) | 2580 |
| AvaI | CYCGRG | 1 cut(s) | 2451 |
| AvaII | GGWCC | 3 cut(s) | 2286, 2681, 2762 |
| BamHI | GGATCC | 1 cut(s) | 2347 |
| BbsI | GAAGAC | 1 cut(s) | 2402 |
| Bbv12I | GWGCWC | 1 cut(s) | 3021 |
| BbvCI | CCTCAGC | 2 cut(s) | 1877, 2078 |
| BceAI | ACGGC | 1 cut(s) | 1778 |
| BciT130I | CCWGG | 1 cut(s) | 2273 |
| BciVI | GTATCC | 1 cut(s) | 667 |
| BclI | TGATCA | 2 cut(s) | 130, 1587 |
| BcnI | CCSGG | 1 cut(s) | 2580 |
| BcoDI | GTCTC | 2 cut(s) | 296, 2568 |
| BfaI | CTAG | 8 cut(s) | 374, 1439, 1815, 1854, 1947, 2246, 2490, 2705 |
| BfmI | CTRYAG | 5 cut(s) | 870, 1665, 1782, 2429, 3218 |
| BfuAI | ACCTGC | 2 cut(s) | 2492, 3318 |
| BfuI | GTATCC | 1 cut(s) | 667 |
| BglII | AGATCT | 3 cut(s) | 2447, 2492, 2893 |
| BmcAI | AGTACT | 1 cut(s) | 2554 |
| Bme1390I | CCNGG | 2 cut(s) | 2273, 2580 |
| Bme18I | GGWCC | 3 cut(s) | 2286, 2681, 2762 |
| BmeT110I | CYCGRG | 1 cut(s) | 2451 |
| BmgBI | CACGTC | 1 cut(s) | 493 |
| BmgT120I | GGNCC | 4 cut(s) | 2275, 2286, 2681, 2762 |
| BmiI | GGNNCC | 3 cut(s) | 426, 2139, 2349 |
| BmrFI | CCNGG | 2 cut(s) | 2273, 2580 |
| BmsI | GCATC | 8 cut(s) | 849, 1123, 1501, 2117, 2891, 2978, 3058, 3304 |
| BpiI | GAAGAC | 1 cut(s) | 2402 |
| BpmI | CTGGAG | 1 cut(s) | 2388 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1877, 2078, 3123 |
| BpuEI | CTTGAG | 1 cut(s) | 2550 |
| BpuMI | CCSGG | 1 cut(s) | 2580 |
| Bsa29I | ATCGAT | 2 cut(s) | 2993, 3319 |
| BsaBI | GATNNNNATC | 3 cut(s) | 153, 1113, 1413 |
| BsaI | GGTCTC | 1 cut(s) | 2568 |
| BsaJI | CCNNGG | 4 cut(s) | 2093, 2271, 2272, 3012 |
| BsaWI | WCCGGW | 3 cut(s) | 94, 281, 2791 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 416, 446 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 288, 2273 |
| Bse118I | RCCGGY | 2 cut(s) | 94, 2791 |
| Bse1I | ACTGG | 5 cut(s) | 1197, 1747, 2171, 2371, 3171 |
| Bse3DI | GCAATG | 4 cut(s) | 89, 242, 3005, 3194 |
| Bse8I | GATNNNNATC | 3 cut(s) | 153, 1113, 1413 |
| BseAI | TCCGGA | 1 cut(s) | 281 |
| BseBI | CCWGG | 1 cut(s) | 2273 |
| BseCI | ATCGAT | 2 cut(s) | 2993, 3319 |
| BseDI | CCNNGG | 4 cut(s) | 2093, 2271, 2272, 3012 |
| BseGI | GGATG | 7 cut(s) | 146, 196, 278, 1887, 2510, 3118, 3175 |
| BseJI | GATNNNNATC | 3 cut(s) | 153, 1113, 1413 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 288, 2273 |
| BseMI | GCAATG | 4 cut(s) | 89, 242, 3005, 3194 |
| BseMII | CTCAG | 6 cut(s) | 201, 321, 1868, 2069, 2970, 3114 |
| BseNI | ACTGG | 5 cut(s) | 1197, 1747, 2171, 2371, 3171 |
| BseRI | GAGGAG | 1 cut(s) | 1797 |
| BseYI | CCCAGC | 1 cut(s) | 2352 |
| BsgI | GTGCAG | 1 cut(s) | 1937 |
| BshFI | GGCC | 7 cut(s) | 559, 2277, 2418, 3057, 3067, 3151, 3253 |
| BshTI | ACCGGT | 2 cut(s) | 94, 2791 |
| BshVI | ATCGAT | 2 cut(s) | 2993, 3319 |
| BsiHKAI | GWGCWC | 1 cut(s) | 3021 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2451 |
| BsiSI | CCGG | 6 cut(s) | 95, 282, 422, 2054, 2579, 2792 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 288, 2273 |
| BsmAI | GTCTC | 2 cut(s) | 296, 2568 |
| BsnI | GGCC | 7 cut(s) | 559, 2277, 2418, 3057, 3067, 3151, 3253 |
| Bso31I | GGTCTC | 1 cut(s) | 2568 |
| BsoBI | CYCGRG | 1 cut(s) | 2451 |
| Bsp1286I | GDGCHC | 1 cut(s) | 3021 |
| Bsp13I | TCCGGA | 1 cut(s) | 281 |
| Bsp19I | CCATGG | 1 cut(s) | 2093 |
| BspACI | CCGC | 3 cut(s) | 560, 2284, 2641 |
| BspANI | GGCC | 7 cut(s) | 559, 2277, 2418, 3057, 3067, 3151, 3253 |
| BspCNI | CTCAG | 6 cut(s) | 202, 322, 1869, 2070, 2971, 3115 |
| BspDI | ATCGAT | 2 cut(s) | 2993, 3319 |
| BspEI | TCCGGA | 1 cut(s) | 281 |
| BspLI | GGNNCC | 3 cut(s) | 426, 2139, 2349 |
| BspMAI | CTGCAG | 4 cut(s) | 874, 1786, 2433, 3222 |
| BspMI | ACCTGC | 2 cut(s) | 2492, 3318 |
| BspPI | GGATC | 7 cut(s) | 162, 1273, 1726, 1941, 2162, 2342, 2355 |
| BspQI | GCTCTTC | 2 cut(s) | 660, 756 |
| BspTNI | GGTCTC | 1 cut(s) | 2568 |
| BsrDI | GCAATG | 4 cut(s) | 89, 242, 3005, 3194 |
| BsrFI | RCCGGY | 2 cut(s) | 94, 2791 |
| BsrI | ACTGG | 5 cut(s) | 1197, 1747, 2171, 2371, 3171 |
| BssAI | RCCGGY | 2 cut(s) | 94, 2791 |
| BssECI | CCNNGG | 4 cut(s) | 2093, 2271, 2272, 3012 |
| BssT1I | CCWWGG | 1 cut(s) | 2093 |
| Bst2UI | CCWGG | 1 cut(s) | 2273 |
| Bst4CI | ACNGT | 7 cut(s) | 432, 679, 1051, 1403, 1557, 2147, 2235 |
| Bst6I | CTCTTC | 4 cut(s) | 294, 660, 678, 756 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1825 |
| BstC8I | GCNNGC | 1 cut(s) | 3201 |
| BstDSI | CCRYGG | 1 cut(s) | 2093 |
| BstF5I | GGATG | 7 cut(s) | 146, 196, 278, 1887, 2510, 3118, 3175 |
| BstHHI | GCGC | 1 cut(s) | 933 |
| BstMAI | GTCTC | 2 cut(s) | 296, 2568 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 1452, 1790, 1825, 2074, 2437, 2926, 3016 |
| BstNI | CCWGG | 1 cut(s) | 2273 |
| BstNSI | RCATGY | 4 cut(s) | 26, 516, 912, 2751 |
| BstSCI | CCNGG | 2 cut(s) | 2271, 2578 |
| BstSFI | CTRYAG | 5 cut(s) | 870, 1665, 1782, 2429, 3218 |
| BstV2I | GAAGAC | 1 cut(s) | 2402 |
| BstX2I | RGATCY | 7 cut(s) | 1265, 1933, 2167, 2347, 2447, 2492, 2893 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 596 |
| BstYI | RGATCY | 7 cut(s) | 1265, 1933, 2167, 2347, 2447, 2492, 2893 |
| Bsu15I | ATCGAT | 2 cut(s) | 2993, 3319 |
| BsuI | GTATCC | 1 cut(s) | 667 |
| BsuRI | GGCC | 7 cut(s) | 559, 2277, 2418, 3057, 3067, 3151, 3253 |
| BsuTUI | ATCGAT | 2 cut(s) | 2993, 3319 |
| BtgI | CCRYGG | 1 cut(s) | 2093 |
| BtrI | CACGTC | 1 cut(s) | 493 |
| BtsCI | GGATG | 7 cut(s) | 146, 196, 278, 1887, 2510, 3118, 3175 |
| BtsIMutI | CAGTG | 2 cut(s) | 2364, 2892 |
| BveI | ACCTGC | 2 cut(s) | 2492, 3318 |
| Cac8I | GCNNGC | 1 cut(s) | 3201 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1825, 3217 |
| CfoI | GCGC | 1 cut(s) | 933 |
| Cfr10I | RCCGGY | 2 cut(s) | 94, 2791 |
| Cfr13I | GGNCC | 4 cut(s) | 2275, 2286, 2681, 2762 |
| ClaI | ATCGAT | 2 cut(s) | 2993, 3319 |
| CseI | GACGC | 1 cut(s) | 1894 |
| Csp6I | GTAC | 5 cut(s) | 1142, 1566, 2174, 2553, 2805 |
| CspAI | ACCGGT | 2 cut(s) | 94, 2791 |
| CviQI | GTAC | 5 cut(s) | 1142, 1566, 2174, 2553, 2805 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1209 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1209 |
| Eam1104I | CTCTTC | 4 cut(s) | 294, 660, 678, 756 |
| EarI | CTCTTC | 4 cut(s) | 294, 660, 678, 756 |
| Eco130I | CCWWGG | 1 cut(s) | 2093 |
| Eco147I | AGGCCT | 4 cut(s) | 3057, 3067, 3151, 3253 |
| Eco31I | GGTCTC | 1 cut(s) | 2568 |
| Eco32I | GATATC | 2 cut(s) | 1415, 1483 |
| Eco47I | GGWCC | 3 cut(s) | 2286, 2681, 2762 |
| Eco88I | CYCGRG | 1 cut(s) | 2451 |
| EcoRII | CCWGG | 1 cut(s) | 2271 |
| EcoRV | GATATC | 2 cut(s) | 1415, 1483 |
| EcoT14I | CCWWGG | 1 cut(s) | 2093 |
| ErhI | CCWWGG | 1 cut(s) | 2093 |
| FauI | CCCGC | 1 cut(s) | 2634 |
| FauNDI | CATATG | 1 cut(s) | 2940 |
| FbaI | TGATCA | 2 cut(s) | 130, 1587 |
| FokI | GGATG | 7 cut(s) | 153, 203, 265, 1894, 2497, 3105, 3182 |
| FspBI | CTAG | 8 cut(s) | 374, 1439, 1815, 1854, 1947, 2246, 2490, 2705 |
| FspI | TGCGCA | 1 cut(s) | 932 |
| GlaI | GCGC | 1 cut(s) | 932 |
| GsaI | CCCAGC | 1 cut(s) | 2356 |
| GsuI | CTGGAG | 1 cut(s) | 2388 |
| HaeIII | GGCC | 7 cut(s) | 559, 2277, 2418, 3057, 3067, 3151, 3253 |
| HapII | CCGG | 6 cut(s) | 95, 282, 422, 2054, 2579, 2792 |
| HgaI | GACGC | 1 cut(s) | 1894 |
| HhaI | GCGC | 1 cut(s) | 933 |
| Hin6I | GCGC | 1 cut(s) | 931 |
| HinP1I | GCGC | 1 cut(s) | 931 |
| HincII | GTYRAC | 2 cut(s) | 2822, 3075 |
| HindII | GTYRAC | 2 cut(s) | 2822, 3075 |
| HinfI | GANTC | 6 cut(s) | 181, 1754, 2015, 2114, 2297, 2341 |
| HpaII | CCGG | 6 cut(s) | 95, 282, 422, 2054, 2579, 2792 |
| HpyAV | CCTTC | 8 cut(s) | 281, 698, 1247, 1598, 1640, 2128, 2331, 3162 |
| HpyCH4III | ACNGT | 7 cut(s) | 432, 679, 1051, 1403, 1557, 2147, 2235 |
| HpyCH4IV | ACGT | 2 cut(s) | 492, 2950 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 1452, 1790, 1825, 2074, 2437, 2926, 3016 |
| HpySE526I | ACGT | 2 cut(s) | 492, 2950 |
| HspAI | GCGC | 1 cut(s) | 931 |
| Kpn2I | TCCGGA | 1 cut(s) | 281 |
| Ksp22I | TGATCA | 2 cut(s) | 130, 1587 |
| LguI | GCTCTTC | 2 cut(s) | 660, 756 |
| LmnI | GCTCC | 5 cut(s) | 352, 424, 2152, 3016, 3318 |
| LweI | GCATC | 8 cut(s) | 849, 1123, 1501, 2117, 2891, 2978, 3058, 3304 |
| MaeI | CTAG | 8 cut(s) | 374, 1439, 1815, 1854, 1947, 2246, 2490, 2705 |
| MaeII | ACGT | 2 cut(s) | 492, 2950 |
| MfeI | CAATTG | 2 cut(s) | 258, 2007 |
| MflI | RGATCY | 7 cut(s) | 1265, 1933, 2167, 2347, 2447, 2492, 2893 |
| MhlI | GDGCHC | 1 cut(s) | 3021 |
| MlyI | GAGTC | 1 cut(s) | 1763 |
| MmeI | TCCRAC | 2 cut(s) | 1911, 3243 |
| MroI | TCCGGA | 1 cut(s) | 281 |
| MroXI | GAANNNNTTC | 7 cut(s) | 96, 369, 576, 753, 1131, 1221, 2895 |
| MseI | TTAA | 7 cut(s) | 954, 1611, 1724, 1737, 1797, 1955, 2360 |
| MslI | CAYNNNNRTG | 2 cut(s) | 3024, 3096 |
| MspA1I | CMGCKG | 3 cut(s) | 2077, 2428, 2932 |
| MspI | CCGG | 6 cut(s) | 95, 282, 422, 2054, 2579, 2792 |
| MspR9I | CCNGG | 2 cut(s) | 2273, 2580 |
| MunI | CAATTG | 2 cut(s) | 258, 2007 |
| MvaI | CCWGG | 1 cut(s) | 2273 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 1452, 1790, 1825, 2074, 2437, 2926, 3016 |
| NciI | CCSGG | 1 cut(s) | 2580 |
| NcoI | CCATGG | 1 cut(s) | 2093 |
| NdeI | CATATG | 1 cut(s) | 2940 |
| NlaIV | GGNNCC | 3 cut(s) | 426, 2139, 2349 |
| NmuCI | GTSAC | 5 cut(s) | 325, 697, 1087, 1177, 1369 |
| NsbI | TGCGCA | 1 cut(s) | 932 |
| NspI | RCATGY | 4 cut(s) | 26, 516, 912, 2751 |
| PaeR7I | CTCGAG | 1 cut(s) | 2451 |
| PasI | CCCWGGG | 1 cut(s) | 2272 |
| PceI | AGGCCT | 4 cut(s) | 3057, 3067, 3151, 3253 |
| PciI | ACATGT | 3 cut(s) | 22, 512, 908 |
| PciSI | GCTCTTC | 2 cut(s) | 660, 756 |
| PdmI | GAANNNNTTC | 7 cut(s) | 96, 369, 576, 753, 1131, 1221, 2895 |
| PfeI | GAWTC | 5 cut(s) | 181, 2015, 2114, 2297, 2341 |
| PinAI | ACCGGT | 2 cut(s) | 94, 2791 |
| PleI | GAGTC | 1 cut(s) | 1762 |
| PpsI | GAGTC | 1 cut(s) | 1762 |
| PscI | ACATGT | 3 cut(s) | 22, 512, 908 |
| Psp6I | CCWGG | 1 cut(s) | 2271 |
| PspFI | CCCAGC | 1 cut(s) | 2352 |
| PspGI | CCWGG | 1 cut(s) | 2271 |
| PspN4I | GGNNCC | 3 cut(s) | 426, 2139, 2349 |
| PspPI | GGNCC | 4 cut(s) | 2275, 2286, 2681, 2762 |
| PstI | CTGCAG | 4 cut(s) | 874, 1786, 2433, 3222 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1825, 3217 |
| PsuI | RGATCY | 7 cut(s) | 1265, 1933, 2167, 2347, 2447, 2492, 2893 |
| PvuII | CAGCTG | 3 cut(s) | 2077, 2428, 2932 |
| RsaI | GTAC | 5 cut(s) | 1143, 1567, 2175, 2554, 2806 |
| RsaNI | GTAC | 5 cut(s) | 1142, 1566, 2174, 2553, 2805 |
| RseI | CAYNNNNRTG | 2 cut(s) | 3024, 3096 |
| SapI | GCTCTTC | 2 cut(s) | 660, 756 |
| SaqAI | TTAA | 7 cut(s) | 954, 1611, 1724, 1737, 1797, 1955, 2360 |
| Sau96I | GGNCC | 4 cut(s) | 2275, 2286, 2681, 2762 |
| ScaI | AGTACT | 1 cut(s) | 2554 |
| SchI | GAGTC | 1 cut(s) | 1763 |
| ScrFI | CCNGG | 2 cut(s) | 2273, 2580 |
| SduI | GDGCHC | 1 cut(s) | 3021 |
| SfaNI | GCATC | 8 cut(s) | 849, 1123, 1501, 2117, 2891, 2978, 3058, 3304 |
| SfcI | CTRYAG | 5 cut(s) | 870, 1665, 1782, 2429, 3218 |
| Sfr274I | CTCGAG | 1 cut(s) | 2451 |
| SinI | GGWCC | 3 cut(s) | 2286, 2681, 2762 |
| SlaI | CTCGAG | 1 cut(s) | 2451 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 3024, 3096 |
| SmlI | CTYRAG | 2 cut(s) | 2451, 2565 |
| SmoI | CTYRAG | 2 cut(s) | 2451, 2565 |
| SseBI | AGGCCT | 4 cut(s) | 3057, 3067, 3151, 3253 |
| SsiI | CCGC | 3 cut(s) | 560, 2284, 2641 |
| SspI | AATATT | 1 cut(s) | 952 |
| SspMI | CTAG | 8 cut(s) | 374, 1439, 1815, 1854, 1947, 2246, 2490, 2705 |
| StuI | AGGCCT | 4 cut(s) | 3057, 3067, 3151, 3253 |
| StyD4I | CCNGG | 2 cut(s) | 2271, 2578 |
| StyI | CCWWGG | 1 cut(s) | 2093 |
| TaaI | ACNGT | 7 cut(s) | 432, 679, 1051, 1403, 1557, 2147, 2235 |
| TaiI | ACGT | 2 cut(s) | 495, 2953 |
| TaqI | TCGA | 8 cut(s) | 88, 100, 361, 2132, 2452, 2603, 2993, 3319 |
| TaqII | GACCGA | 1 cut(s) | 1106 |
| TatI | WGTACW | 4 cut(s) | 1565, 2173, 2552, 2804 |
| TauI | GCSGC | 1 cut(s) | 562 |
| TfiI | GAWTC | 5 cut(s) | 181, 2015, 2114, 2297, 2341 |
| Tru1I | TTAA | 7 cut(s) | 954, 1611, 1724, 1737, 1797, 1955, 2360 |
| Tru9I | TTAA | 7 cut(s) | 954, 1611, 1724, 1737, 1797, 1955, 2360 |
| TscAI | CASTG | 2 cut(s) | 2371, 2892 |
| TseFI | GTSAC | 5 cut(s) | 325, 697, 1087, 1177, 1369 |
| Tsp45I | GTSAC | 5 cut(s) | 325, 697, 1087, 1177, 1369 |
| TspGWI | ACGGA | 1 cut(s) | 3076 |
| TspRI | CASTG | 2 cut(s) | 2371, 2892 |
| VpaK11BI | GGWCC | 3 cut(s) | 2286, 2681, 2762 |
| XapI | RAATTY | 5 cut(s) | 749, 1325, 1620, 2460, 2590 |
| XbaI | TCTAGA | 1 cut(s) | 373 |
| XceI | RCATGY | 4 cut(s) | 26, 516, 912, 2751 |
| XhoI | CTCGAG | 1 cut(s) | 2451 |
| XmnI | GAANNNNTTC | 7 cut(s) | 96, 369, 576, 753, 1131, 1221, 2895 |
| XspI | CTAG | 8 cut(s) | 374, 1439, 1815, 1854, 1947, 2246, 2490, 2705 |
| ZrmI | AGTACT | 1 cut(s) | 2554 |