Rh7DG235600

Domain in histone families 1 and 5

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000827
Physical Location & Seq
Forward (+)
23411616 .. 23416133
4518 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG235600.1

Sequence Viewer

Length: 3948 bp
ATGTCTGCCGAAGTAGTTGAACATGTGAAATTAGCCGAAGAACGAGATGGAGTTGGTGAAAATGAGAGAGAATTAGGGTTGCAATGTCGAGAACCGGTTCGAGAAGATGAGCAGAGTAAGGTCATTGATGATCAGAATGGATGTCCTGGTGAGGATCAAGATGAGCTGATTGGACAACTGATTAAGGAGGAGGGAGTGATTGACTTGACTGAGCAAAAACTACAACATGGGAAGCAATGTCAAGAAAGTGGTTCTCCAATCACTACATCTTTCGGCTCATCCGGAGAAGGGAAATGCGAAGAGACTGAAGAACATCAAGTTGAAGTGACTGAGCAACAACTACAACATGGGGAGCAAAGTCGAGAACTTATTCTAGAAAAAGAAGATAGCTTTGTGATTGAGTATCAACAAAATGGTTCGCCGGAGCCACAGTATGAGGGGCAAGATGAAGCAAATGGGGAGAAGAACCACAATCAAATGCAAGTAACTGAAGTGATTGGTGCAGAGCAGACATGTAAAGCAGAAATTGAGGTTACTGAACAACATAGAGAAGATAGGCTGCAAAGTCAAGAACCAATTCAAGCAGACCATCAACTTGGGTTGGGTGATGAGCAGCAAAATGAAGTTATTGGACAAAAAATGCAAGAAATTGCATTGGTTATTGAAGAGCAGGATATTGTGGAAGAGAAGTATAGAGTGACTGAAGGACAAGTTGAAGTGAGTGAACAATGGCTGCAATTTTGTCAGGAATTTGTTCAAGAAGAGCAACATAGTTTGCTGATTGACTATAAAGATGGTTCTTTGGAGAAACATATTGAACAGCAAGATATAGTCAATGAACAGAAAAGTCAAAAGCAGATGCAAGTAACTGCAGTCATTGTTGAGAACTATAATGTTGCAGAACAGACATGTAAAGTAGAAAATGGGCTGCCCAATCAAGAAGAACAGAATATTAAGGTGATTGACAATGTAAATGTATGTCCAGATGAGCAGCAAGGTGAAGTGATTGGACATCAAGTTCAGAACCAAATGCAAGAAATTGCATTGATTGTTGAAAAGCAGAATGTTGTAGTACAGAAATATGAAGTGACCGAACAACAGATAGAAGATGGGCATCAAAGTCAAGAACCAATTCAAGAGGTACAGAAAAATAAGGTGAGCAAAGCACAAGTTCAAGTGACTGAACAACAACCGGAATATGGACAGCAAAGTCGAGAACCGATTCAAGAAGAACAGCATGATAAGATGGCTGAAGCTGAAAGTGGATCTCCAAATGAGAAGCAAGGTGATGTGAATGGACATCACATTCAGATACAATGTCAAGAATTTATTGCTACAAATCAGAATGTTGCAGTACAGAAGTATAAAGTGACTGAAGAACAAGTTGAAGTGATTGAACAGCAGACAGAATGTGGACAGCAAAACCAAGAACCAATTCAAGAACAGAACAGTAAGGTGATTGACTATCAAAATGGATTGTCAAAGCCAGAAAATGAACAGAAAGATGAAGTGAATGGACAGAAAAATAAAAGTCAAATACAAGTAATTACTGAGATTGTTGATAATCACAATGTTGCAGAGCTTTTTCATGAGGTGACCAAAGAACAAGAAGTTGAAGTAACTGAACAACAGAGAGACCATGGGCAGCAAAGTCAAGAAGAACAGAATAGTAAGGTGATTGACTGTCAAGATGGATATCCAATGCAACAAAATGAACAGCTAGATGGCGTAAATGGCAATCAAGTTCAAAATCAAATGCAAGATATCGTAGTGAGTGTTGAAAAGCAGATTGATGCTAAACTGAAATATAAAGTGCCTGAAGATCAAATGGAAGAACCGTGTCATAGTACAGAACAACAATGTGAAGTGACCAAAGAACATATTGAAGGCATTAAAAGACAAATTCAATTCCAAGAAGAAGTAGTTGAAGGGATTGACAAGCTGACTACAGCAGAAGCACTGCAAGTTGAGAATGTTTCAGAATTGCAAGAGCAAATTGAGTTATTAAGGACGATCCTTAATGCTGGCAGTATGCAGGCGTCGTTTTGCAAGAAGCCAGAGAAAGCTGCAGCCATAGCCGTTAATTCAACTCCTCTTACTAGGCAGAAACTGCCCTACCAAAGTTCATCAACTTTCTCTAGGGAGAATTGTTTAGAATTGTTGAGGATGACACATAAACTTCAGGAAAAGACACATAGGGTGCAGGAAAGTTTGTTGGATCTCTTGACCACTAGAGAGTTAAGCCATACAACTCCTAACTCTTTTGTGGACTTAGAGGAAAGAACAATGCCAATTGCTGATTCTTGTGGAGAGAGGGAATACATGGATTGTGGTTTTCCGGCACAAATGAAGCACCACCAGCTGAGGCAACTACGTCCATGGGGTAAAAAAGCATCTGAATCTGATTGCAGAGTATCGAAGGAACCTAACTGTCAGGAGCAGCAGCACAGAGATCCAGTACAGGAAAAAAGTAAGTGTGATGGTCAAGTAGTTGAGTTATCATGTCAAACACAGCAACAGTCACGGGAACTAGCACAGCAGAGGGAATTGCCTCCCCAGGGCCAGAGGCGGTCCAAATCTGAATCGTTACTCACTACATCTGTGGTGGACTTATCACCAAGAAGGAATCAGGATCCCCAGCAATTAAACACTGGAGTAACTGAAAAGCCTCAAAAACTGAAGACATCAGCAAAGAAAACAGGCCAAACACAGCAGCAGCAGAGGCAACTTAGATCTCGAGGAAAAATTTTGTCTGAATGTAAACAAGTAACAACTAGATCTATGGCAGGTTCATCACCCTCACAGCCTCTTTATGAGCAGTATCAGTTGATTTCAAGTACTGCAAGGTCTCAAGTGGAAAAGCCGGGAATAGAAAATTCATCTCAATCGAAGAAGCAACCAGCAAATCACTCTAATCGGCGAAAGCGGGGAACACCAGAGCCTACAACAATGCCAAATGCCATTGGTCCAATCCTCCCTTGCAAGAAACTAGCATTAGGCTGTCAGAATGTAGAACTTCCCACTCCTGAAGCATGTGAAGATGTAGGACCAACAATCATGGACAAGTCATCTCAACCGGTGGTGCAAAGTACAGATCATCATGGTCAACAAAAGATGTTGAAATCCAAGCCAACAACAATGGCAGAAAGTCCACAGCTCAATTCAGCATCAGTGGAAGATCTTCCTCAAACAGCAAAAGAGCTGCAACAGAAGCAGCTGTGCCATATGAACTTACGTTCATGCAGCCAAGCTGCATCACAATCTGAGCTTGTTGTATCGATGGCACAATCATTGCCCTCGGAGCACCATTATGAGCAGCCACAAGAAATGAAGCATCAAGGCCTACGGAGGCCTAAGTTGACTTCACACAATCAGCATAATGGTGAACTTAAGCTTCCAAAACATCCTGAGCAGCCACAGAAACCAAGAGGGAGGCCTTCTAAACGAAAACTGGATGTGGCTGCGACTGAAGATGTATCATTGCCTGCTAAGTATCAGAAACTGCAGGAAGAACCACAAAATCAAAGACAAGAGAGGCCTCCTAAGTTGGAAAGAAATATGGTTTTGGGTCTTTTTGCTGCATCAAAATATGAACCTGCTCCACCGATGACAGAACCACCGTTTTTAAAGCTGAATCCAGATAATGAGCATCATGTTGAGCTGCAGCCCCTGAAGCATCCTGAGCAACCACAAAAACGAAGGGGGAGGCCTCGAAAGTTGAATCCAGATAATGAGCTTGTGAAGAACTGCCGCACCCAAAGTACCTTGAGCAGCCACAAAAGGGAAGACGAACTGCAGCTGCCAAAGCAACCTGAGCAGCCACAAAATCCAAAAAGACGACGAGGGAGGCCCTGTAACATCTCAGTGAACGAGCTGAAGCAAGAAATGAGTCAGAGGGAAAGGCGCCAAAGCAAGCGACTGAAGGAACAGAAGGAAGCGACTATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Linker_histone

Protein Analysis

1315

Amino Acids

150.08

Weight (kDa)

5.17

Isoelectric Point (pI)

69.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1209
Acc36I ACCTGC 2 cut(s) 2777, 3604
AccB1I GGYRCC 1 cut(s) 3903
AccIII TCCGGA 1 cut(s) 281
AciI CCGC 3 cut(s) 2569, 2926, 3751
AclWI GGATC 7 cut(s) 162, 1273, 2008, 2226, 2447, 2627, 2640
AcsI RAATTY 5 cut(s) 749, 1325, 1902, 2745, 2875
AcyI GRCGYC 2 cut(s) 2039, 3904
AfaI GTAC 8 cut(s) 1074, 1143, 1356, 1849, 2460, 2839, 3091, 3763
AfiI CCNNNNNNNGG 4 cut(s) 288, 1199, 2558, 3781
AflII CTTAAG 1 cut(s) 3389
AflIII ACRYGT 3 cut(s) 22, 512, 908
AgeI ACCGGT 2 cut(s) 94, 3076
AjnI CCWGG 2 cut(s) 145, 2556
AjuI GAANNNNNNNTTGG 4 cut(s) 1419, 1451, 2284, 2316
AloI GAACNNNNNNTCC 2 cut(s) 1002, 1034
Alw21I GWGCWC 1 cut(s) 3306
Alw26I GTCTC 3 cut(s) 296, 1629, 2853
AlwI GGATC 7 cut(s) 162, 1273, 2008, 2226, 2447, 2627, 2640
AlwNI CAGNNNCTG 3 cut(s) 2110, 3502, 3670
Ama87I CYCGRG 1 cut(s) 2736
Aor13HI TCCGGA 1 cut(s) 281
AoxI GGCC 8 cut(s) 2560, 2701, 3340, 3350, 3434, 3536, 3707, 3848
ApoI RAATTY 5 cut(s) 749, 1325, 1902, 2745, 2875
AsiGI ACCGGT 2 cut(s) 94, 3076
Asp700I GAANNNNTTC 8 cut(s) 96, 369, 576, 753, 1131, 1221, 1434, 3180
AspLEI GCGC 1 cut(s) 3906
AspS9I GGNCC 5 cut(s) 2560, 2571, 2966, 3047, 3849
AsuC2I CCSGG 1 cut(s) 2865
AvaI CYCGRG 1 cut(s) 2736
AvaII GGWCC 3 cut(s) 2571, 2966, 3047
BamHI GGATCC 1 cut(s) 2632
BanI GGYRCC 1 cut(s) 3903
BbsI GAAGAC 2 cut(s) 2687, 3792
Bbv12I GWGCWC 1 cut(s) 3306
BbvCI CCTCAGC 1 cut(s) 2363
BccI CCATC 9 cut(s) 41, 597, 788, 1103, 1240, 1685, 1718, 2474, 3274
BceAI ACGGC 1 cut(s) 2063
BciT130I CCWGG 2 cut(s) 147, 2558
BclI TGATCA 1 cut(s) 130
BcnI CCSGG 1 cut(s) 2865
BcoDI GTCTC 3 cut(s) 296, 1629, 2853
BfaI CTAG 8 cut(s) 374, 1721, 2100, 2139, 2232, 2531, 2775, 2990
BfmI CTRYAG 6 cut(s) 870, 1947, 2067, 3503, 3662, 3794
BfoI RGCGCY 1 cut(s) 3907
BfrI CTTAAG 1 cut(s) 3389
BfuAI ACCTGC 2 cut(s) 2777, 3604
BglII AGATCT 3 cut(s) 2732, 2777, 3178
BmcAI AGTACT 1 cut(s) 2839
Bme1390I CCNGG 3 cut(s) 147, 2558, 2865
Bme18I GGWCC 3 cut(s) 2571, 2966, 3047
BmeT110I CYCGRG 1 cut(s) 2736
BmgT120I GGNCC 5 cut(s) 2560, 2571, 2966, 3047, 3849
BmiI GGNNCC 4 cut(s) 426, 2424, 2634, 3905
BmrFI CCNGG 3 cut(s) 147, 2558, 2865
BpiI GAAGAC 2 cut(s) 2687, 3792
BpmI CTGGAG 1 cut(s) 2673
Bpu10I CCTNAGC 4 cut(s) 2363, 3408, 3681, 3813
BpuEI CTTGAG 2 cut(s) 2835, 3787
BpuMI CCSGG 1 cut(s) 2865
Bsa29I ATCGAT 1 cut(s) 3278
BsaBI GATNNNNATC 2 cut(s) 1113, 1695
BsaHI GRCGYC 2 cut(s) 2039, 3904
BsaI GGTCTC 2 cut(s) 1629, 2853
BsaJI CCNNGG 5 cut(s) 1639, 2378, 2556, 2557, 3297
BsaWI WCCGGW 4 cut(s) 94, 281, 1192, 3076
BsaXI ACNNNNNCTCC 4 cut(s) 416, 446, 3838, 3868
Bsc4I CCNNNNNNNGG 4 cut(s) 288, 1199, 2558, 3781
Bse118I RCCGGY 2 cut(s) 94, 3076
Bse1I ACTGG 3 cut(s) 2456, 2656, 3456
Bse3DI GCAATG 4 cut(s) 89, 242, 3290, 3479
Bse8I GATNNNNATC 2 cut(s) 1113, 1695
BseAI TCCGGA 1 cut(s) 281
BseBI CCWGG 2 cut(s) 147, 2558
BseCI ATCGAT 1 cut(s) 3278
BseDI CCNNGG 5 cut(s) 1639, 2378, 2556, 2557, 3297
BseGI GGATG 6 cut(s) 146, 278, 2172, 3403, 3460, 3676
BseJI GATNNNNATC 2 cut(s) 1113, 1695
BseLI CCNNNNNNNGG 4 cut(s) 288, 1199, 2558, 3781
BseMI GCAATG 4 cut(s) 89, 242, 3290, 3479
BseMII CTCAG 9 cut(s) 201, 321, 1542, 2354, 3255, 3399, 3672, 3804, 3876
BseNI ACTGG 3 cut(s) 2456, 2656, 3456
BseRI GAGGAG 2 cut(s) 203, 2082
BseYI CCCAGC 1 cut(s) 2637
BsgI GTGCAG 2 cut(s) 522, 2222
BshFI GGCC 8 cut(s) 2562, 2703, 3342, 3352, 3436, 3538, 3709, 3850
BshNI GGYRCC 1 cut(s) 3903
BshTI ACCGGT 2 cut(s) 94, 3076
BshVI ATCGAT 1 cut(s) 3278
BsiHKAI GWGCWC 1 cut(s) 3306
BsiHKCI CYCGRG 1 cut(s) 2736
BsiSI CCGG 7 cut(s) 95, 282, 422, 1193, 2339, 2864, 3077
BslI CCNNNNNNNGG 4 cut(s) 288, 1199, 2558, 3781
BsmAI GTCTC 3 cut(s) 296, 1629, 2853
BsnI GGCC 8 cut(s) 2562, 2703, 3342, 3352, 3436, 3538, 3709, 3850
Bso31I GGTCTC 2 cut(s) 1629, 2853
BsoBI CYCGRG 1 cut(s) 2736
Bsp1286I GDGCHC 1 cut(s) 3306
Bsp13I TCCGGA 1 cut(s) 281
Bsp19I CCATGG 2 cut(s) 1639, 2378
BspACI CCGC 3 cut(s) 2569, 2926, 3751
BspANI GGCC 8 cut(s) 2562, 2703, 3342, 3352, 3436, 3538, 3709, 3850
BspCNI CTCAG 9 cut(s) 202, 322, 1543, 2355, 3256, 3400, 3673, 3805, 3875
BspDI ATCGAT 1 cut(s) 3278
BspEI TCCGGA 1 cut(s) 281
BspHI TCATGA 1 cut(s) 1588
BspLI GGNNCC 4 cut(s) 426, 2424, 2634, 3905
BspMAI CTGCAG 5 cut(s) 874, 2071, 3507, 3666, 3798
BspMI ACCTGC 2 cut(s) 2777, 3604
BspPI GGATC 7 cut(s) 162, 1273, 2008, 2226, 2447, 2627, 2640
BspQI GCTCTTC 2 cut(s) 660, 756
BspT107I GGYRCC 1 cut(s) 3903
BspTI CTTAAG 1 cut(s) 3389
BspTNI GGTCTC 2 cut(s) 1629, 2853
BsrDI GCAATG 4 cut(s) 89, 242, 3290, 3479
BsrFI RCCGGY 2 cut(s) 94, 3076
BsrI ACTGG 3 cut(s) 2456, 2656, 3456
BssAI RCCGGY 2 cut(s) 94, 3076
BssECI CCNNGG 5 cut(s) 1639, 2378, 2556, 2557, 3297
BssNI GRCGYC 2 cut(s) 2039, 3904
BssT1I CCWWGG 2 cut(s) 1639, 2378
Bst2UI CCWGG 2 cut(s) 147, 2558
Bst4CI ACNGT 7 cut(s) 432, 1451, 1685, 1839, 2432, 2520, 3621
Bst6I CTCTTC 4 cut(s) 294, 660, 678, 756
BstACI GRCGYC 2 cut(s) 2039, 3904
BstAFI CTTAAG 1 cut(s) 3389
BstAPI GCANNNNNTGC 1 cut(s) 2110
BstC8I GCNNGC 4 cut(s) 2026, 2037, 3486, 3914
BstDSI CCRYGG 2 cut(s) 1639, 2378
BstEII GGTNACC 1 cut(s) 1594
BstF5I GGATG 6 cut(s) 146, 278, 2172, 3403, 3460, 3676
BstH2I RGCGCY 1 cut(s) 3907
BstHHI GCGC 1 cut(s) 3906
BstMAI GTCTC 3 cut(s) 296, 1629, 2853
BstNI CCWGG 2 cut(s) 147, 2558
BstNSI RCATGY 4 cut(s) 26, 516, 912, 3036
BstPI GGTNACC 1 cut(s) 1594
BstSCI CCNGG 3 cut(s) 145, 2556, 2863
BstSFI CTRYAG 6 cut(s) 870, 1947, 2067, 3503, 3662, 3794
BstV2I GAAGAC 2 cut(s) 2687, 3792
BstX2I RGATCY 7 cut(s) 1265, 2218, 2452, 2632, 2732, 2777, 3178
BstXI CCANNNNNNTGG 1 cut(s) 596
BstYI RGATCY 7 cut(s) 1265, 2218, 2452, 2632, 2732, 2777, 3178
Bsu15I ATCGAT 1 cut(s) 3278
BsuRI GGCC 8 cut(s) 2562, 2703, 3342, 3352, 3436, 3538, 3709, 3850
BsuTUI ATCGAT 1 cut(s) 3278
BtgI CCRYGG 2 cut(s) 1639, 2378
BtsCI GGATG 6 cut(s) 146, 278, 2172, 3403, 3460, 3676
BtsI GCAGTG 1 cut(s) 1958
BtsIMutI CAGTG 4 cut(s) 1958, 2649, 3177, 3870
BveI ACCTGC 2 cut(s) 2777, 3604
Cac8I GCNNGC 4 cut(s) 2026, 2037, 3486, 3914
CaiI CAGNNNCTG 3 cut(s) 2110, 3502, 3670
CciI TCATGA 1 cut(s) 1588
CfoI GCGC 1 cut(s) 3906
Cfr10I RCCGGY 2 cut(s) 94, 3076
Cfr13I GGNCC 5 cut(s) 2560, 2571, 2966, 3047, 3849
ClaI ATCGAT 1 cut(s) 3278
CseI GACGC 1 cut(s) 2028
Csp6I GTAC 8 cut(s) 1073, 1142, 1355, 1848, 2459, 2838, 3090, 3762
CspAI ACCGGT 2 cut(s) 94, 3076
CviQI GTAC 8 cut(s) 1073, 1142, 1355, 1848, 2459, 2838, 3090, 3762
DinI GGCGCC 1 cut(s) 3905
DraI TTTAAA 1 cut(s) 3627
DrdI GACNNNNNNGTC 1 cut(s) 1209
DseDI GACNNNNNNGTC 1 cut(s) 1209
Eam1104I CTCTTC 4 cut(s) 294, 660, 678, 756
EarI CTCTTC 4 cut(s) 294, 660, 678, 756
Eco130I CCWWGG 2 cut(s) 1639, 2378
Eco147I AGGCCT 5 cut(s) 3342, 3352, 3436, 3538, 3709
Eco31I GGTCTC 2 cut(s) 1629, 2853
Eco32I GATATC 2 cut(s) 1697, 1765
Eco47I GGWCC 3 cut(s) 2571, 2966, 3047
Eco88I CYCGRG 1 cut(s) 2736
Eco91I GGTNACC 1 cut(s) 1594
EcoO109I RGGNCCY 1 cut(s) 3849
EcoO65I GGTNACC 1 cut(s) 1594
EcoRII CCWGG 2 cut(s) 145, 2556
EcoRV GATATC 2 cut(s) 1697, 1765
EcoT14I CCWWGG 2 cut(s) 1639, 2378
EgeI GGCGCC 1 cut(s) 3905
EheI GGCGCC 1 cut(s) 3905
ErhI CCWWGG 2 cut(s) 1639, 2378
FauI CCCGC 1 cut(s) 2919
FauNDI CATATG 1 cut(s) 3225
FbaI TGATCA 1 cut(s) 130
FokI GGATG 6 cut(s) 153, 265, 2179, 3390, 3467, 3663
FspBI CTAG 8 cut(s) 374, 1721, 2100, 2139, 2232, 2531, 2775, 2990
GlaI GCGC 1 cut(s) 3905
GsaI CCCAGC 1 cut(s) 2641
GsuI CTGGAG 1 cut(s) 2673
HaeII RGCGCY 1 cut(s) 3907
HaeIII GGCC 8 cut(s) 2562, 2703, 3342, 3352, 3436, 3538, 3709, 3850
HapII CCGG 7 cut(s) 95, 282, 422, 1193, 2339, 2864, 3077
HgaI GACGC 1 cut(s) 2028
HhaI GCGC 1 cut(s) 3906
Hin1I GRCGYC 2 cut(s) 2039, 3904
Hin6I GCGC 1 cut(s) 3904
HinP1I GCGC 1 cut(s) 3904
HincII GTYRAC 2 cut(s) 3107, 3360
HindII GTYRAC 2 cut(s) 3107, 3360
HindIII AAGCTT 1 cut(s) 3392
HinfI GANTC 8 cut(s) 1222, 2300, 2399, 2582, 2626, 3634, 3721, 3889
HpaII CCGG 7 cut(s) 95, 282, 422, 1193, 2339, 2864, 3077
Hpy99I CGWCG 2 cut(s) 2044, 3843
HpyCH4III ACNGT 7 cut(s) 432, 1451, 1685, 1839, 2432, 2520, 3621
HpyCH4IV ACGT 2 cut(s) 2374, 3235
HpySE526I ACGT 2 cut(s) 2374, 3235
Hsp92I GRCGYC 2 cut(s) 2039, 3904
HspAI GCGC 1 cut(s) 3904
KasI GGCGCC 1 cut(s) 3903
Kpn2I TCCGGA 1 cut(s) 281
Ksp22I TGATCA 1 cut(s) 130
LguI GCTCTTC 2 cut(s) 660, 756
LmnI GCTCC 5 cut(s) 352, 424, 2437, 3301, 3604
MaeI CTAG 8 cut(s) 374, 1721, 2100, 2139, 2232, 2531, 2775, 2990
MaeII ACGT 2 cut(s) 2374, 3235
MfeI CAATTG 1 cut(s) 2292
MflI RGATCY 7 cut(s) 1265, 2218, 2452, 2632, 2732, 2777, 3178
MhlI GDGCHC 1 cut(s) 3306
Mly113I GGCGCC 1 cut(s) 3904
MlyI GAGTC 1 cut(s) 3898
MmeI TCCRAC 2 cut(s) 2196, 3528
MroI TCCGGA 1 cut(s) 281
MroXI GAANNNNTTC 8 cut(s) 96, 369, 576, 753, 1131, 1221, 1434, 3180
MslI CAYNNNNRTG 3 cut(s) 3309, 3381, 3863
MspA1I CMGCKG 3 cut(s) 2362, 3217, 3799
MspCI CTTAAG 1 cut(s) 3389
MspI CCGG 7 cut(s) 95, 282, 422, 1193, 2339, 2864, 3077
MspR9I CCNGG 3 cut(s) 147, 2558, 2865
MunI CAATTG 1 cut(s) 2292
MvaI CCWGG 2 cut(s) 147, 2558
NarI GGCGCC 1 cut(s) 3904
NciI CCSGG 1 cut(s) 2865
NcoI CCATGG 2 cut(s) 1639, 2378
NdeI CATATG 1 cut(s) 3225
NlaIV GGNNCC 4 cut(s) 426, 2424, 2634, 3905
NmuCI GTSAC 8 cut(s) 325, 697, 1087, 1177, 1369, 1594, 1867, 2520
NspI RCATGY 4 cut(s) 26, 516, 912, 3036
PaeR7I CTCGAG 1 cut(s) 2736
PagI TCATGA 1 cut(s) 1588
PasI CCCWGGG 1 cut(s) 2557
PceI AGGCCT 5 cut(s) 3342, 3352, 3436, 3538, 3709
PciI ACATGT 3 cut(s) 22, 512, 908
PciSI GCTCTTC 2 cut(s) 660, 756
PdmI GAANNNNTTC 8 cut(s) 96, 369, 576, 753, 1131, 1221, 1434, 3180
PfeI GAWTC 7 cut(s) 1222, 2300, 2399, 2582, 2626, 3634, 3721
PinAI ACCGGT 2 cut(s) 94, 3076
PleI GAGTC 1 cut(s) 3897
PluTI GGCGCC 1 cut(s) 3907
PpsI GAGTC 1 cut(s) 3897
PscI ACATGT 3 cut(s) 22, 512, 908
Psp6I CCWGG 2 cut(s) 145, 2556
PspEI GGTNACC 1 cut(s) 1594
PspFI CCCAGC 1 cut(s) 2637
PspGI CCWGG 2 cut(s) 145, 2556
PspN4I GGNNCC 4 cut(s) 426, 2424, 2634, 3905
PspPI GGNCC 5 cut(s) 2560, 2571, 2966, 3047, 3849
PstI CTGCAG 5 cut(s) 874, 2071, 3507, 3666, 3798
PstNI CAGNNNCTG 3 cut(s) 2110, 3502, 3670
PsuI RGATCY 7 cut(s) 1265, 2218, 2452, 2632, 2732, 2777, 3178
PvuII CAGCTG 3 cut(s) 2362, 3217, 3799
RsaI GTAC 8 cut(s) 1074, 1143, 1356, 1849, 2460, 2839, 3091, 3763
RsaNI GTAC 8 cut(s) 1073, 1142, 1355, 1848, 2459, 2838, 3090, 3762
RseI CAYNNNNRTG 3 cut(s) 3309, 3381, 3863
SapI GCTCTTC 2 cut(s) 660, 756
Sau96I GGNCC 5 cut(s) 2560, 2571, 2966, 3047, 3849
ScaI AGTACT 1 cut(s) 2839
SchI GAGTC 1 cut(s) 3898
ScrFI CCNGG 3 cut(s) 147, 2558, 2865
SduI GDGCHC 1 cut(s) 3306
SfcI CTRYAG 6 cut(s) 870, 1947, 2067, 3503, 3662, 3794
SfoI GGCGCC 1 cut(s) 3905
Sfr274I CTCGAG 1 cut(s) 2736
SinI GGWCC 3 cut(s) 2571, 2966, 3047
SlaI CTCGAG 1 cut(s) 2736
SmiMI CAYNNNNRTG 3 cut(s) 3309, 3381, 3863
SmlI CTYRAG 4 cut(s) 2736, 2850, 3389, 3766
SmoI CTYRAG 4 cut(s) 2736, 2850, 3389, 3766
SseBI AGGCCT 5 cut(s) 3342, 3352, 3436, 3538, 3709
SsiI CCGC 3 cut(s) 2569, 2926, 3751
SspDI GGCGCC 1 cut(s) 3903
SspI AATATT 1 cut(s) 952
SspMI CTAG 8 cut(s) 374, 1721, 2100, 2139, 2232, 2531, 2775, 2990
StuI AGGCCT 5 cut(s) 3342, 3352, 3436, 3538, 3709
StyD4I CCNGG 3 cut(s) 145, 2556, 2863
StyI CCWWGG 2 cut(s) 1639, 2378
TaaI ACNGT 7 cut(s) 432, 1451, 1685, 1839, 2432, 2520, 3621
TaiI ACGT 2 cut(s) 2377, 3238
TaqI TCGA 9 cut(s) 88, 100, 361, 1213, 2417, 2737, 2888, 3278, 3712
TaqII GACCGA 1 cut(s) 1106
TatI WGTACW 6 cut(s) 1072, 1354, 1847, 2458, 2837, 3089
TauI GCSGC 1 cut(s) 3753
TfiI GAWTC 7 cut(s) 1222, 2300, 2399, 2582, 2626, 3634, 3721
TscAI CASTG 4 cut(s) 1965, 2656, 3177, 3870
TseFI GTSAC 8 cut(s) 325, 697, 1087, 1177, 1369, 1594, 1867, 2520
Tsp45I GTSAC 8 cut(s) 325, 697, 1087, 1177, 1369, 1594, 1867, 2520
TspGWI ACGGA 1 cut(s) 3361
TspRI CASTG 4 cut(s) 1965, 2656, 3177, 3870
Vha464I CTTAAG 1 cut(s) 3389
VpaK11BI GGWCC 3 cut(s) 2571, 2966, 3047
XapI RAATTY 5 cut(s) 749, 1325, 1902, 2745, 2875
XbaI TCTAGA 1 cut(s) 373
XceI RCATGY 4 cut(s) 26, 516, 912, 3036
XhoI CTCGAG 1 cut(s) 2736
XmnI GAANNNNTTC 8 cut(s) 96, 369, 576, 753, 1131, 1221, 1434, 3180
XspI CTAG 8 cut(s) 374, 1721, 2100, 2139, 2232, 2531, 2775, 2990
ZrmI AGTACT 1 cut(s) 2839
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.