F-box LRR-repeat protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AatII | GACGTC | 1 cut(s) | 47 |
| Acc36I | ACCTGC | 1 cut(s) | 1382 |
| AccB1I | GGYRCC | 2 cut(s) | 17, 54 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1482, 1502 |
| AccBSI | CCGCTC | 1 cut(s) | 1368 |
| AccI | GTMKAC | 1 cut(s) | 1594 |
| AciI | CCGC | 4 cut(s) | 153, 439, 533, 1368 |
| AclWI | GGATC | 3 cut(s) | 979, 1142, 1296 |
| AcsI | RAATTY | 3 cut(s) | 327, 1028, 1154 |
| AcuI | CTGAAG | 3 cut(s) | 71, 160, 872 |
| AcyI | GRCGYC | 2 cut(s) | 44, 55 |
| AfaI | GTAC | 3 cut(s) | 50, 196, 665 |
| AfiI | CCNNNNNNNGG | 9 cut(s) | 14, 141, 162, 1094, 1335, 1438, 1482, 1502, 1620 |
| AflII | CTTAAG | 1 cut(s) | 931 |
| AflIII | ACRYGT | 2 cut(s) | 260, 1354 |
| AjnI | CCWGG | 1 cut(s) | 951 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1626, 1658 |
| Alw21I | GWGCWC | 2 cut(s) | 204, 235 |
| Alw26I | GTCTC | 2 cut(s) | 1226, 1604 |
| AlwI | GGATC | 3 cut(s) | 979, 1142, 1296 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 1412, 1462 |
| Ama87I | CYCGRG | 2 cut(s) | 1674, 1704 |
| AoxI | GGCC | 3 cut(s) | 68, 132, 1700 |
| ApeKI | GCWGC | 4 cut(s) | 169, 306, 847, 1444 |
| ApoI | RAATTY | 3 cut(s) | 327, 1028, 1154 |
| AspLEI | GCGC | 3 cut(s) | 57, 174, 510 |
| AspS9I | GGNCC | 1 cut(s) | 1701 |
| AsuC2I | CCSGG | 2 cut(s) | 157, 1622 |
| AsuHPI | GGTGA | 4 cut(s) | 56, 227, 910, 1517 |
| AvaI | CYCGRG | 2 cut(s) | 1674, 1704 |
| BanI | GGYRCC | 2 cut(s) | 17, 54 |
| BanII | GRGCYC | 3 cut(s) | 162, 204, 235 |
| BbsI | GAAGAC | 2 cut(s) | 1458, 1539 |
| Bbv12I | GWGCWC | 2 cut(s) | 204, 235 |
| BbvI | GCAGC | 4 cut(s) | 156, 293, 859, 1456 |
| BccI | CCATC | 3 cut(s) | 583, 1167, 1171 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 119, 153 |
| BciT130I | CCWGG | 1 cut(s) | 953 |
| BclI | TGATCA | 1 cut(s) | 220 |
| BcnI | CCSGG | 2 cut(s) | 157, 1622 |
| BcoDI | GTCTC | 2 cut(s) | 1226, 1604 |
| BfaI | CTAG | 6 cut(s) | 408, 716, 1140, 1167, 1257, 1362 |
| BfmI | CTRYAG | 2 cut(s) | 642, 989 |
| BfoI | RGCGCY | 1 cut(s) | 58 |
| BfrI | CTTAAG | 1 cut(s) | 931 |
| BfuAI | ACCTGC | 1 cut(s) | 1382 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 131 |
| BglII | AGATCT | 1 cut(s) | 1766 |
| BisI | GCNGC | 5 cut(s) | 153, 170, 307, 848, 1445 |
| BlpI | GCTNAGC | 1 cut(s) | 435 |
| BlsI | GCNGC | 5 cut(s) | 154, 171, 308, 849, 1446 |
| Bme1390I | CCNGG | 3 cut(s) | 157, 953, 1622 |
| BmeT110I | CYCGRG | 2 cut(s) | 1674, 1704 |
| BmgT120I | GGNCC | 1 cut(s) | 1701 |
| BmiI | GGNNCC | 3 cut(s) | 19, 56, 1703 |
| BmrFI | CCNGG | 3 cut(s) | 157, 953, 1622 |
| BmrI | ACTGGG | 1 cut(s) | 1427 |
| BmsI | GCATC | 4 cut(s) | 289, 853, 1573, 1701 |
| BmuI | ACTGGG | 1 cut(s) | 1427 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1357 |
| BpiI | GAAGAC | 2 cut(s) | 1458, 1539 |
| BpmI | CTGGAG | 1 cut(s) | 1389 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 435 |
| BpuEI | CTTGAG | 1 cut(s) | 260 |
| BpuMI | CCSGG | 2 cut(s) | 157, 1622 |
| BsaBI | GATNNNNATC | 2 cut(s) | 222, 888 |
| BsaHI | GRCGYC | 2 cut(s) | 44, 55 |
| BsaI | GGTCTC | 1 cut(s) | 1604 |
| BsaJI | CCNNGG | 3 cut(s) | 129, 727, 951 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 565, 595, 1267, 1297, 1357, 1387 |
| Bsc4I | CCNNNNNNNGG | 9 cut(s) | 14, 141, 162, 1094, 1335, 1438, 1482, 1502, 1620 |
| Bse118I | RCCGGY | 2 cut(s) | 51, 66 |
| Bse1I | ACTGG | 7 cut(s) | 78, 98, 649, 876, 1345, 1433, 1653 |
| Bse8I | GATNNNNATC | 2 cut(s) | 222, 888 |
| BseBI | CCWGG | 1 cut(s) | 953 |
| BseDI | CCNNGG | 3 cut(s) | 129, 727, 951 |
| BseGI | GGATG | 5 cut(s) | 304, 328, 594, 1159, 1686 |
| BseJI | GATNNNNATC | 2 cut(s) | 222, 888 |
| BseLI | CCNNNNNNNGG | 9 cut(s) | 14, 141, 162, 1094, 1335, 1438, 1482, 1502, 1620 |
| BseMII | CTCAG | 2 cut(s) | 813, 969 |
| BseNI | ACTGG | 7 cut(s) | 78, 98, 649, 876, 1345, 1433, 1653 |
| BseRI | GAGGAG | 1 cut(s) | 589 |
| BseXI | GCAGC | 4 cut(s) | 156, 293, 859, 1456 |
| BsgI | GTGCAG | 1 cut(s) | 866 |
| BshFI | GGCC | 3 cut(s) | 70, 134, 1702 |
| BshNI | GGYRCC | 2 cut(s) | 17, 54 |
| BsiHKAI | GWGCWC | 2 cut(s) | 204, 235 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1674, 1704 |
| BsiSI | CCGG | 7 cut(s) | 34, 52, 67, 156, 310, 962, 1621 |
| BslI | CCNNNNNNNGG | 9 cut(s) | 14, 141, 162, 1094, 1335, 1438, 1482, 1502, 1620 |
| BsmAI | GTCTC | 2 cut(s) | 1226, 1604 |
| BsmI | GAATGC | 1 cut(s) | 417 |
| BsnI | GGCC | 3 cut(s) | 70, 134, 1702 |
| Bso31I | GGTCTC | 1 cut(s) | 1604 |
| BsoBI | CYCGRG | 2 cut(s) | 1674, 1704 |
| Bsp1286I | GDGCHC | 3 cut(s) | 162, 204, 235 |
| Bsp143I | GATC | 7 cut(s) | 220, 526, 984, 1147, 1288, 1487, 1766 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 435 |
| BspACI | CCGC | 4 cut(s) | 153, 439, 533, 1368 |
| BspANI | GGCC | 3 cut(s) | 70, 134, 1702 |
| BspCNI | CTCAG | 2 cut(s) | 814, 970 |
| BspHI | TCATGA | 1 cut(s) | 654 |
| BspLI | GGNNCC | 3 cut(s) | 19, 56, 1703 |
| BspMAI | CTGCAG | 1 cut(s) | 646 |
| BspMI | ACCTGC | 1 cut(s) | 1382 |
| BspPI | GGATC | 3 cut(s) | 979, 1142, 1296 |
| BspT107I | GGYRCC | 2 cut(s) | 17, 54 |
| BspTI | CTTAAG | 1 cut(s) | 931 |
| BspTNI | GGTCTC | 1 cut(s) | 1604 |
| BsrBI | CCGCTC | 1 cut(s) | 1368 |
| BsrFI | RCCGGY | 2 cut(s) | 51, 66 |
| BsrI | ACTGG | 7 cut(s) | 78, 98, 649, 876, 1345, 1433, 1653 |
| BssAI | RCCGGY | 2 cut(s) | 51, 66 |
| BssECI | CCNNGG | 3 cut(s) | 129, 727, 951 |
| BssMI | GATC | 7 cut(s) | 220, 526, 984, 1147, 1288, 1487, 1766 |
| BssNI | GRCGYC | 2 cut(s) | 44, 55 |
| BssT1I | CCWWGG | 1 cut(s) | 727 |
| Bst2UI | CCWGG | 1 cut(s) | 953 |
| Bst4CI | ACNGT | 4 cut(s) | 17, 367, 1133, 1229 |
| Bst6I | CTCTTC | 4 cut(s) | 480, 666, 792, 1071 |
| BstACI | GRCGYC | 2 cut(s) | 44, 55 |
| BstAFI | CTTAAG | 1 cut(s) | 931 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 516 |
| BstC8I | GCNNGC | 3 cut(s) | 150, 304, 1544 |
| BstDEI | CTNAG | 5 cut(s) | 435, 560, 599, 822, 978 |
| BstF5I | GGATG | 5 cut(s) | 304, 328, 594, 1159, 1686 |
| BstH2I | RGCGCY | 1 cut(s) | 58 |
| BstHHI | GCGC | 3 cut(s) | 57, 174, 510 |
| BstKTI | GATC | 7 cut(s) | 223, 529, 987, 1150, 1291, 1490, 1769 |
| BstMAI | GTCTC | 2 cut(s) | 1226, 1604 |
| BstMBI | GATC | 7 cut(s) | 220, 526, 984, 1147, 1288, 1487, 1766 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 97, 131, 166, 516, 853, 872, 1453 |
| BstNI | CCWGG | 1 cut(s) | 953 |
| BstNSI | RCATGY | 3 cut(s) | 264, 1358, 1380 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1357 |
| BstSCI | CCNGG | 3 cut(s) | 155, 951, 1620 |
| BstSFI | CTRYAG | 2 cut(s) | 642, 989 |
| BstV1I | GCAGC | 4 cut(s) | 156, 293, 859, 1456 |
| BstV2I | GAAGAC | 2 cut(s) | 1458, 1539 |
| BstX2I | RGATCY | 1 cut(s) | 1766 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1721, 1741 |
| BstYI | RGATCY | 1 cut(s) | 1766 |
| BsuRI | GGCC | 3 cut(s) | 70, 134, 1702 |
| BtsCI | GGATG | 5 cut(s) | 304, 328, 594, 1159, 1686 |
| BtsI | GCAGTG | 1 cut(s) | 390 |
| BtsIMutI | CAGTG | 5 cut(s) | 91, 390, 1138, 1352, 1646 |
| BveI | ACCTGC | 1 cut(s) | 1382 |
| Cac8I | GCNNGC | 3 cut(s) | 150, 304, 1544 |
| CaiI | CAGNNNCTG | 2 cut(s) | 1412, 1462 |
| CciI | TCATGA | 1 cut(s) | 654 |
| CfoI | GCGC | 3 cut(s) | 57, 174, 510 |
| Cfr10I | RCCGGY | 2 cut(s) | 51, 66 |
| Cfr13I | GGNCC | 1 cut(s) | 1701 |
| CseI | GACGC | 1 cut(s) | 1698 |
| Csp6I | GTAC | 3 cut(s) | 49, 195, 664 |
| CviQI | GTAC | 3 cut(s) | 49, 195, 664 |
| DdeI | CTNAG | 5 cut(s) | 435, 560, 599, 822, 978 |
| DinI | GGCGCC | 1 cut(s) | 56 |
| DpnI | GATC | 7 cut(s) | 222, 528, 986, 1149, 1290, 1489, 1768 |
| DpnII | GATC | 7 cut(s) | 220, 526, 984, 1147, 1288, 1487, 1766 |
| DraI | TTTAAA | 1 cut(s) | 1789 |
| Eam1104I | CTCTTC | 4 cut(s) | 480, 666, 792, 1071 |
| EarI | CTCTTC | 4 cut(s) | 480, 666, 792, 1071 |
| Ecl136II | GAGCTC | 2 cut(s) | 202, 233 |
| Eco130I | CCWWGG | 1 cut(s) | 727 |
| Eco147I | AGGCCT | 1 cut(s) | 134 |
| Eco24I | GRGCYC | 3 cut(s) | 162, 204, 235 |
| Eco31I | GGTCTC | 1 cut(s) | 1604 |
| Eco32I | GATATC | 1 cut(s) | 1021 |
| Eco53kI | GAGCTC | 2 cut(s) | 202, 233 |
| Eco57I | CTGAAG | 3 cut(s) | 71, 160, 872 |
| Eco88I | CYCGRG | 2 cut(s) | 1674, 1704 |
| EcoICRI | GAGCTC | 2 cut(s) | 202, 233 |
| EcoRII | CCWGG | 1 cut(s) | 951 |
| EcoRV | GATATC | 1 cut(s) | 1021 |
| EcoT14I | CCWWGG | 1 cut(s) | 727 |
| EcoT38I | GRGCYC | 3 cut(s) | 162, 204, 235 |
| EgeI | GGCGCC | 1 cut(s) | 56 |
| EheI | GGCGCC | 1 cut(s) | 56 |
| ErhI | CCWWGG | 1 cut(s) | 727 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 158, 190 |
| FauNDI | CATATG | 2 cut(s) | 1036, 1090 |
| FbaI | TGATCA | 1 cut(s) | 220 |
| FblI | GTMKAC | 1 cut(s) | 1594 |
| Fnu4HI | GCNGC | 5 cut(s) | 153, 170, 307, 848, 1445 |
| FokI | GGATG | 5 cut(s) | 311, 335, 601, 1146, 1693 |
| FriOI | GRGCYC | 3 cut(s) | 162, 204, 235 |
| Fsp4HI | GCNGC | 5 cut(s) | 153, 170, 307, 848, 1445 |
| FspBI | CTAG | 6 cut(s) | 408, 716, 1140, 1167, 1257, 1362 |
| GlaI | GCGC | 3 cut(s) | 56, 173, 509 |
| GluI | GCNGC | 5 cut(s) | 153, 170, 307, 848, 1445 |
| GsuI | CTGGAG | 1 cut(s) | 1389 |
| HaeII | RGCGCY | 1 cut(s) | 58 |
| HaeIII | GGCC | 3 cut(s) | 70, 134, 1702 |
| HapII | CCGG | 7 cut(s) | 34, 52, 67, 156, 310, 962, 1621 |
| HgaI | GACGC | 1 cut(s) | 1698 |
| HhaI | GCGC | 3 cut(s) | 57, 174, 510 |
| Hin1I | GRCGYC | 2 cut(s) | 44, 55 |
| Hin6I | GCGC | 3 cut(s) | 55, 172, 508 |
| HinP1I | GCGC | 3 cut(s) | 55, 172, 508 |
| HincII | GTYRAC | 1 cut(s) | 1189 |
| HindII | GTYRAC | 1 cut(s) | 1189 |
| HindIII | AAGCTT | 3 cut(s) | 479, 1478, 1736 |
| HpaII | CCGG | 7 cut(s) | 34, 52, 67, 156, 310, 962, 1621 |
| HphI | GGTGA | 4 cut(s) | 56, 227, 910, 1517 |
| Hpy166II | GTNNAC | 4 cut(s) | 83, 901, 1189, 1595 |
| Hpy188III | TCNNGA | 9 cut(s) | 163, 422, 451, 655, 878, 1016, 1172, 1311, 1406 |
| Hpy8I | GTNNAC | 4 cut(s) | 83, 901, 1189, 1595 |
| Hpy99I | CGWCG | 4 cut(s) | 33, 46, 49, 110 |
| HpyAV | CCTTC | 2 cut(s) | 745, 1088 |
| HpyCH4III | ACNGT | 4 cut(s) | 17, 367, 1133, 1229 |
| HpyCH4IV | ACGT | 3 cut(s) | 44, 662, 1567 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 97, 131, 166, 516, 853, 872, 1453 |
| HpyF3I | CTNAG | 5 cut(s) | 435, 560, 599, 822, 978 |
| HpySE526I | ACGT | 3 cut(s) | 44, 662, 1567 |
| Hsp92I | GRCGYC | 2 cut(s) | 44, 55 |
| HspAI | GCGC | 3 cut(s) | 55, 172, 508 |
| KasI | GGCGCC | 1 cut(s) | 54 |
| Ksp22I | TGATCA | 1 cut(s) | 220 |
| Kzo9I | GATC | 7 cut(s) | 220, 526, 984, 1147, 1288, 1487, 1766 |
| LmnI | GCTCC | 3 cut(s) | 105, 1365, 1441 |
| Lsp1109I | GCAGC | 4 cut(s) | 156, 293, 859, 1456 |
| LweI | GCATC | 4 cut(s) | 289, 853, 1573, 1701 |
| MaeI | CTAG | 6 cut(s) | 408, 716, 1140, 1167, 1257, 1362 |
| MaeII | ACGT | 3 cut(s) | 44, 662, 1567 |
| MaeIII | GTNAC | 3 cut(s) | 1127, 1208, 1558 |
| MalI | GATC | 7 cut(s) | 222, 528, 986, 1149, 1290, 1489, 1768 |
| MbiI | CCGCTC | 1 cut(s) | 1368 |
| MboI | GATC | 7 cut(s) | 220, 526, 984, 1147, 1288, 1487, 1766 |
| MflI | RGATCY | 1 cut(s) | 1766 |
| MhlI | GDGCHC | 3 cut(s) | 162, 204, 235 |
| Mly113I | GGCGCC | 1 cut(s) | 55 |
| MlyI | GAGTC | 3 cut(s) | 468, 586, 1285 |
| MmeI | TCCRAC | 1 cut(s) | 1108 |
| MseI | TTAA | 7 cut(s) | 540, 932, 968, 999, 1113, 1515, 1788 |
| MspA1I | CMGCKG | 1 cut(s) | 850 |
| MspCI | CTTAAG | 1 cut(s) | 931 |
| MspI | CCGG | 7 cut(s) | 34, 52, 67, 156, 310, 962, 1621 |
| MspR9I | CCNGG | 3 cut(s) | 157, 953, 1622 |
| Mva1269I | GAATGC | 1 cut(s) | 417 |
| MvaI | CCWGG | 1 cut(s) | 953 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 97, 131, 166, 516, 853, 872, 1453 |
| NarI | GGCGCC | 1 cut(s) | 55 |
| NciI | CCSGG | 2 cut(s) | 157, 1622 |
| NdeI | CATATG | 2 cut(s) | 1036, 1090 |
| NdeII | GATC | 7 cut(s) | 220, 526, 984, 1147, 1288, 1487, 1766 |
| NlaIV | GGNNCC | 3 cut(s) | 19, 56, 1703 |
| NmuCI | GTSAC | 1 cut(s) | 1127 |
| NspI | RCATGY | 3 cut(s) | 264, 1358, 1380 |
| PaeR7I | CTCGAG | 1 cut(s) | 1674 |
| PagI | TCATGA | 1 cut(s) | 654 |
| PceI | AGGCCT | 1 cut(s) | 134 |
| PciI | ACATGT | 2 cut(s) | 260, 1354 |
| PctI | GAATGC | 1 cut(s) | 417 |
| PfeI | GAWTC | 7 cut(s) | 23, 248, 317, 690, 767, 1625, 1660 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1482, 1502 |
| PkrI | GCNGC | 5 cut(s) | 154, 171, 308, 849, 1446 |
| PleI | GAGTC | 3 cut(s) | 467, 585, 1284 |
| PluTI | GGCGCC | 1 cut(s) | 58 |
| PpsI | GAGTC | 3 cut(s) | 467, 585, 1284 |
| PscI | ACATGT | 2 cut(s) | 260, 1354 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1357 |
| Psp124BI | GAGCTC | 2 cut(s) | 204, 235 |
| Psp6I | CCWGG | 1 cut(s) | 951 |
| PspGI | CCWGG | 1 cut(s) | 951 |
| PspN4I | GGNNCC | 3 cut(s) | 19, 56, 1703 |
| PspPI | GGNCC | 1 cut(s) | 1701 |
| PspXI | VCTCGAGB | 1 cut(s) | 1674 |
| PstI | CTGCAG | 1 cut(s) | 646 |
| PstNI | CAGNNNCTG | 2 cut(s) | 1412, 1462 |
| PsuI | RGATCY | 1 cut(s) | 1766 |
| PvuII | CAGCTG | 1 cut(s) | 850 |
| RsaI | GTAC | 3 cut(s) | 50, 196, 665 |
| RsaNI | GTAC | 3 cut(s) | 49, 195, 664 |
| SacI | GAGCTC | 2 cut(s) | 204, 235 |
| SaqAI | TTAA | 7 cut(s) | 540, 932, 968, 999, 1113, 1515, 1788 |
| SatI | GCNGC | 5 cut(s) | 153, 170, 307, 848, 1445 |
| Sau3AI | GATC | 7 cut(s) | 220, 526, 984, 1147, 1288, 1487, 1766 |
| Sau96I | GGNCC | 1 cut(s) | 1701 |
| SchI | GAGTC | 3 cut(s) | 468, 586, 1285 |
| ScrFI | CCNGG | 3 cut(s) | 157, 953, 1622 |
| SduI | GDGCHC | 3 cut(s) | 162, 204, 235 |
| SfaNI | GCATC | 4 cut(s) | 289, 853, 1573, 1701 |
| SfcI | CTRYAG | 2 cut(s) | 642, 989 |
| SfoI | GGCGCC | 1 cut(s) | 56 |
| Sfr274I | CTCGAG | 1 cut(s) | 1674 |
| SlaI | CTCGAG | 1 cut(s) | 1674 |
| SmlI | CTYRAG | 3 cut(s) | 239, 931, 1674 |
| SmoI | CTYRAG | 3 cut(s) | 239, 931, 1674 |
| SseBI | AGGCCT | 1 cut(s) | 134 |
| SsiI | CCGC | 4 cut(s) | 153, 439, 533, 1368 |
| SspDI | GGCGCC | 1 cut(s) | 54 |
| SspI | AATATT | 1 cut(s) | 1012 |
| SspMI | CTAG | 6 cut(s) | 408, 716, 1140, 1167, 1257, 1362 |
| SstI | GAGCTC | 2 cut(s) | 204, 235 |
| StuI | AGGCCT | 1 cut(s) | 134 |
| StyD4I | CCNGG | 3 cut(s) | 155, 951, 1620 |
| StyI | CCWWGG | 1 cut(s) | 727 |
| TaaI | ACNGT | 4 cut(s) | 17, 367, 1133, 1229 |
| TaiI | ACGT | 3 cut(s) | 47, 665, 1570 |
| TaqI | TCGA | 6 cut(s) | 229, 355, 421, 1023, 1675, 1695 |
| TauI | GCSGC | 1 cut(s) | 155 |
| TfiI | GAWTC | 7 cut(s) | 23, 248, 317, 690, 767, 1625, 1660 |
| Tru1I | TTAA | 7 cut(s) | 540, 932, 968, 999, 1113, 1515, 1788 |
| Tru9I | TTAA | 7 cut(s) | 540, 932, 968, 999, 1113, 1515, 1788 |
| TscAI | CASTG | 5 cut(s) | 98, 390, 1138, 1352, 1653 |
| TseFI | GTSAC | 1 cut(s) | 1127 |
| TseI | GCWGC | 4 cut(s) | 169, 306, 847, 1444 |
| Tsp45I | GTSAC | 1 cut(s) | 1127 |
| TspGWI | ACGGA | 1 cut(s) | 63 |
| TspRI | CASTG | 5 cut(s) | 98, 390, 1138, 1352, 1653 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1482, 1502 |
| Vha464I | CTTAAG | 1 cut(s) | 931 |
| XapI | RAATTY | 3 cut(s) | 327, 1028, 1154 |
| XceI | RCATGY | 3 cut(s) | 264, 1358, 1380 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 90, 274 |
| XhoI | CTCGAG | 1 cut(s) | 1674 |
| XmiI | GTMKAC | 1 cut(s) | 1594 |
| XspI | CTAG | 6 cut(s) | 408, 716, 1140, 1167, 1257, 1362 |
| ZraI | GACGTC | 1 cut(s) | 45 |