Rh2AG365800

Nudix hydrolase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2A
Physical Location & Seq
Forward (+)
54230622 .. 54232014
1393 bp
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UTR
Exon/CDS
Intron
Rh2AG365800.1

Sequence Viewer

Length: 333 bp
ATGGCATCTTGCAGGAGTGCTATCGATTCTTCTTTGTTTAAGCAGTGGCTGAAGAACACCCAGAGTGAAAATGGGATTTTACATGGCGGTTCCATGTCTCTTACACGAGTTCTAATTCAGCACATTGGTTTTCTGAAATTCCAAGCAGATGTATTCGATAAACAAACAGGGAAAAAGGTTCCAGGTATTGTGTTTGCACGAGGAGCAGCTGTAGCTGTGCTTATCCTTTTGAAGTCAGAGGAGATGACGTATGCTGTTCTTACTGAGCAGCTACCAAAACTTCTTTCTCCAGTTTCCAAAACTTTGTGGAATGACTTGAACTGCAGCAACTGA

Protein Analysis

110

Amino Acids

12.09

Weight (kDa)

9.3

Isoelectric Point (pI)

52.82

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 87
AcsI RAATTY 1 cut(s) 137
AcuI CTGAAG 1 cut(s) 71
AgsI TTSAA 2 cut(s) 232, 319
AjnI CCWGG 1 cut(s) 181
AjuI GAANNNNNNNTTGG 2 cut(s) 268, 300
AluBI AGCT 3 cut(s) 209, 215, 271
AluI AGCT 3 cut(s) 209, 215, 271
Alw26I GTCTC 1 cut(s) 102
AlwNI CAGNNNCTG 2 cut(s) 49, 330
ApeKI GCWGC 3 cut(s) 206, 268, 324
ApoI RAATTY 1 cut(s) 137
BauI CACGAG 2 cut(s) 105, 198
BbvI GCAGC 2 cut(s) 218, 280
BciT130I CCWGG 1 cut(s) 183
BcoDI GTCTC 1 cut(s) 102
BfmI CTRYAG 2 cut(s) 210, 322
BisI GCNGC 3 cut(s) 207, 269, 325
BlsI GCNGC 3 cut(s) 208, 270, 326
Bme1390I CCNGG 1 cut(s) 183
BmiI GGNNCC 2 cut(s) 91, 180
BmrFI CCNGG 1 cut(s) 183
BmsI GCATC 1 cut(s) 14
BpmI CTGGAG 1 cut(s) 273
Bsa29I ATCGAT 1 cut(s) 24
BsaXI ACNNNNNCTCC 4 cut(s) 195, 225, 233, 263
Bse1I ACTGG 1 cut(s) 290
BseBI CCWGG 1 cut(s) 183
BseCI ATCGAT 1 cut(s) 24
BseMII CTCAG 1 cut(s) 255
BseNI ACTGG 1 cut(s) 290
BseRI GAGGAG 2 cut(s) 216, 254
BseXI GCAGC 2 cut(s) 218, 280
BshVI ATCGAT 1 cut(s) 24
BsmAI GTCTC 1 cut(s) 102
BspACI CCGC 1 cut(s) 87
BspCNI CTCAG 1 cut(s) 256
BspDI ATCGAT 1 cut(s) 24
BspLI GGNNCC 2 cut(s) 91, 180
BspMAI CTGCAG 1 cut(s) 326
BsrI ACTGG 1 cut(s) 290
BssSI CACGAG 2 cut(s) 105, 198
Bst2BI CACGAG 2 cut(s) 105, 198
Bst2UI CCWGG 1 cut(s) 183
BstDEI CTNAG 1 cut(s) 264
BstMAI GTCTC 1 cut(s) 102
BstMWI GCNNNNNNNGC 2 cut(s) 203, 212
BstNI CCWGG 1 cut(s) 183
BstSCI CCNGG 1 cut(s) 181
BstSFI CTRYAG 2 cut(s) 210, 322
BstV1I GCAGC 2 cut(s) 218, 280
Bsu15I ATCGAT 1 cut(s) 24
BsuTUI ATCGAT 1 cut(s) 24
BtsI GCAGTG 1 cut(s) 50
BtsIMutI CAGTG 1 cut(s) 50
CaiI CAGNNNCTG 2 cut(s) 49, 330
ClaI ATCGAT 1 cut(s) 24
CviAII CATG 2 cut(s) 83, 94
CviJI RGCY 4 cut(s) 49, 209, 215, 271
CviKI_1 RGCY 4 cut(s) 49, 209, 215, 271
DdeI CTNAG 1 cut(s) 264
Eco57I CTGAAG 1 cut(s) 71
EcoRII CCWGG 1 cut(s) 181
FaeI CATG 2 cut(s) 86, 97
FaiI YATR 3 cut(s) 84, 95, 252
FatI CATG 2 cut(s) 82, 93
Fnu4HI GCNGC 3 cut(s) 207, 269, 325
Fsp4HI GCNGC 3 cut(s) 207, 269, 325
GluI GCNGC 3 cut(s) 207, 269, 325
GsuI CTGGAG 1 cut(s) 273
Hin1II CATG 2 cut(s) 86, 97
HinfI GANTC 1 cut(s) 26
Hpy188I TCNGA 2 cut(s) 135, 238
HpyCH4IV ACGT 1 cut(s) 248
HpyCH4V TGCA 3 cut(s) 12, 197, 324
HpyF10VI GCNNNNNNNGC 2 cut(s) 203, 212
HpyF3I CTNAG 1 cut(s) 264
HpySE526I ACGT 1 cut(s) 248
Hsp92II CATG 2 cut(s) 86, 97
LmnI GCTCC 1 cut(s) 203
LpnPI CCDG 5 cut(s) 74, 153, 168, 195, 303
Lsp1109I GCAGC 2 cut(s) 218, 280
LweI GCATC 1 cut(s) 14
MaeII ACGT 1 cut(s) 248
MboII GAAGA 2 cut(s) 21, 64
MluCI AATT 2 cut(s) 114, 137
MnlI CCTC 2 cut(s) 194, 232
MseI TTAA 1 cut(s) 39
MspA1I CMGCKG 1 cut(s) 209
MspR9I CCNGG 1 cut(s) 183
MvaI CCWGG 1 cut(s) 183
MwoI GCNNNNNNNGC 2 cut(s) 203, 212
NlaIII CATG 2 cut(s) 86, 97
NlaIV GGNNCC 2 cut(s) 91, 180
PfeI GAWTC 1 cut(s) 26
PkrI GCNGC 3 cut(s) 208, 270, 326
Psp6I CCWGG 1 cut(s) 181
PspGI CCWGG 1 cut(s) 181
PspN4I GGNNCC 2 cut(s) 91, 180
PstI CTGCAG 1 cut(s) 326
PstNI CAGNNNCTG 2 cut(s) 49, 330
PvuII CAGCTG 1 cut(s) 209
SaqAI TTAA 1 cut(s) 39
SatI GCNGC 3 cut(s) 207, 269, 325
ScrFI CCNGG 1 cut(s) 183
SetI ASST 6 cut(s) 180, 187, 211, 217, 251, 273
SfaNI GCATC 1 cut(s) 14
SfcI CTRYAG 2 cut(s) 210, 322
Sse9I AATT 2 cut(s) 114, 137
SsiI CCGC 1 cut(s) 87
StyD4I CCNGG 1 cut(s) 181
TaiI ACGT 1 cut(s) 251
TaqI TCGA 2 cut(s) 24, 156
TasI AATT 2 cut(s) 114, 137
TfiI GAWTC 1 cut(s) 26
Tru1I TTAA 1 cut(s) 39
Tru9I TTAA 1 cut(s) 39
TscAI CASTG 1 cut(s) 50
TseI GCWGC 3 cut(s) 206, 268, 324
TspRI CASTG 1 cut(s) 50
XapI RAATTY 1 cut(s) 137
XcmI CCANNNNNNNNNTGG 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.