Rh5CG106200

Belongs to the pyruvate kinase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000831
Physical Location & Seq
Forward (+)
8745213 .. 8748297
3085 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG106200.1

Sequence Viewer

Length: 531 bp
ATGTCGTCTGACTCGTCACCACCGTTAACTTACTCCATTACTCTATCCTGTCAACCCGTCCAGATCGTCGCTGCCCCCCATATCTCCGATTCCGATTTCAGGAGTGCTATCGATTCTTCTTTGTTTAAGCAGTGGCTGAAGAACACCCAGAGTGAAAATGGGATTTTACACGGCGGTTCCATGTCTCTTACACGAGTTCTAATTCAGTTTCATTTAAGCTCTATGACTTGGATAACACGGGCTTTATTGAGCACCAAGAGACCCAAGAGAGAAAATGGCCAGAAGCAAATGTTCACTGTTAGATCAATGAGGATCACCCAGCAGAGCAGTGAAGGCAATCCTAGCTCACCCAATGGTCCTATGGGTGGTGTTGGGGTGAACTCGACTTATGAAATTCAGTCTGATGATGATTACAAAGTGGGTCAGGGAAGGGCATTTGCAAGTGGTCGAAGAAAAACTAAGATTCTCTCAATTCAAAGACAAGGTTATAGCCATAATGCTGGACACCAAGTTAATCATCAAAGTTCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000287 GO:0003006 GO:0003674 GO:0003824 GO:0004743 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0006082 GO:0006090 GO:0006091 GO:0006096 GO:0006139 GO:0006163 GO:0006164 GO:0006165 GO:0006725 GO:0006732 GO:0006733 GO:0006753 GO:0006754 GO:0006757 GO:0006793 GO:0006796 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009058 GO:0009108 GO:0009117 GO:0009123 GO:0009124 GO:0009126 GO:0009127 GO:0009132 GO:0009135 GO:0009141 GO:0009142 GO:0009144 GO:0009145 GO:0009150 GO:0009152 GO:0009156 GO:0009161 GO:0009165 GO:0009166 GO:0009167 GO:0009168 GO:0009179 GO:0009185 GO:0009199 GO:0009201 GO:0009205 GO:0009206 GO:0009259 GO:0009260 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009791 GO:0009987 GO:0010154 GO:0010431 GO:0016052 GO:0016053 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0017144 GO:0018130 GO:0019359 GO:0019362 GO:0019363 GO:0019438 GO:0019439 GO:0019637 GO:0019693 GO:0019752 GO:0021700 GO:0022414 GO:0030955 GO:0031420 GO:0032501 GO:0032502 GO:0032504 GO:0032787 GO:0034404 GO:0034641 GO:0034654 GO:0034655 GO:0042866 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044238 GO:0044248 GO:0044249 GO:0044270 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046031 GO:0046034 GO:0046390 GO:0046394 GO:0046434 GO:0046483 GO:0046496 GO:0046700 GO:0046872 GO:0046939 GO:0048316 GO:0048608 GO:0048609 GO:0048731 GO:0048856 GO:0051186 GO:0051188 GO:0055086 GO:0061458 GO:0071695 GO:0071704 GO:0072330 GO:0072521 GO:0072522 GO:0072524 GO:0072525 GO:0090407 GO:1901135 GO:1901137 GO:1901292 GO:1901293 GO:1901360 GO:1901361 GO:1901362 GO:1901564 GO:1901566 GO:1901575 GO:1901576
KEGG Pathways
Metabolic & Signaling
ko00010 ko00230 ko00620 ko01100 ko01110 ko01120 ko01130 ko01200 ko01230 ko04922 ko04930 ko05165 ko05203 ko05230 map00010 map00230 map00620 map01100 map01110 map01120 map01130 map01200 map01230 map04922 map04930 map05165 map05203 map05230
Pfam Domains
Protein Families
PK PK_C

Protein Analysis

176

Amino Acids

19.39

Weight (kDa)

10.0

Isoelectric Point (pI)

63.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 174
AclWI GGATC 1 cut(s) 320
AcoI YGGCCR 1 cut(s) 277
AcsI RAATTY 1 cut(s) 393
AcuI CTGAAG 1 cut(s) 158
AfiI CCNNNNNNNGG 2 cut(s) 99, 365
AgsI TTSAA 1 cut(s) 476
AluBI AGCT 2 cut(s) 219, 345
AluI AGCT 2 cut(s) 219, 345
Alw21I GWGCWC 1 cut(s) 254
Alw26I GTCTC 2 cut(s) 189, 253
AlwI GGATC 1 cut(s) 320
AlwNI CAGNNNCTG 1 cut(s) 136
AoxI GGCC 1 cut(s) 277
ApeKI GCWGC 1 cut(s) 71
ApoI RAATTY 1 cut(s) 393
AspS9I GGNCC 1 cut(s) 356
AsuHPI GGTGA 4 cut(s) 9, 307, 339, 388
AvaII GGWCC 1 cut(s) 356
BalI TGGCCA 1 cut(s) 279
BauI CACGAG 1 cut(s) 192
Bbv12I GWGCWC 1 cut(s) 254
BbvI GCAGC 1 cut(s) 58
BceAI ACGGC 1 cut(s) 187
BcoDI GTCTC 2 cut(s) 189, 253
BfaI CTAG 1 cut(s) 342
BisI GCNGC 1 cut(s) 72
BlsI GCNGC 1 cut(s) 73
Bme18I GGWCC 1 cut(s) 356
BmgT120I GGNCC 1 cut(s) 356
BmiI GGNNCC 1 cut(s) 178
Bsa29I ATCGAT 1 cut(s) 111
BsaI GGTCTC 1 cut(s) 253
Bsc4I CCNNNNNNNGG 2 cut(s) 99, 365
BseCI ATCGAT 1 cut(s) 111
BseLI CCNNNNNNNGG 2 cut(s) 99, 365
BseXI GCAGC 1 cut(s) 58
BseYI CCCAGC 1 cut(s) 318
BshFI GGCC 1 cut(s) 279
BshVI ATCGAT 1 cut(s) 111
BsiHKAI GWGCWC 1 cut(s) 254
BslI CCNNNNNNNGG 2 cut(s) 99, 365
BsmAI GTCTC 2 cut(s) 189, 253
BsnI GGCC 1 cut(s) 279
Bso31I GGTCTC 1 cut(s) 253
Bsp1286I GDGCHC 1 cut(s) 254
Bsp143I GATC 3 cut(s) 63, 302, 312
BspACI CCGC 1 cut(s) 174
BspANI GGCC 1 cut(s) 279
BspDI ATCGAT 1 cut(s) 111
BspLI GGNNCC 1 cut(s) 178
BspPI GGATC 1 cut(s) 320
BspTNI GGTCTC 1 cut(s) 253
BssMI GATC 3 cut(s) 63, 302, 312
BssSI CACGAG 1 cut(s) 192
Bst2BI CACGAG 1 cut(s) 192
Bst4CI ACNGT 2 cut(s) 24, 298
BstDEI CTNAG 1 cut(s) 459
BstKTI GATC 3 cut(s) 66, 305, 315
BstMAI GTCTC 2 cut(s) 189, 253
BstMBI GATC 3 cut(s) 63, 302, 312
BstMWI GCNNNNNNNGC 2 cut(s) 333, 342
BstV1I GCAGC 1 cut(s) 58
BstXI CCANNNNNNTGG 1 cut(s) 500
Bsu15I ATCGAT 1 cut(s) 111
BsuRI GGCC 1 cut(s) 279
BsuTUI ATCGAT 1 cut(s) 111
BtsI GCAGTG 2 cut(s) 137, 334
BtsIMutI CAGTG 3 cut(s) 137, 294, 334
CaiI CAGNNNCTG 1 cut(s) 136
Cfr13I GGNCC 1 cut(s) 356
ClaI ATCGAT 1 cut(s) 111
CviAII CATG 1 cut(s) 181
CviJI RGCY 6 cut(s) 136, 219, 242, 279, 345, 492
CviKI_1 RGCY 6 cut(s) 136, 219, 242, 279, 345, 492
DdeI CTNAG 1 cut(s) 459
DpnI GATC 3 cut(s) 65, 304, 314
DpnII GATC 3 cut(s) 63, 302, 312
EaeI YGGCCR 1 cut(s) 277
Eco31I GGTCTC 1 cut(s) 253
Eco47I GGWCC 1 cut(s) 356
Eco57I CTGAAG 1 cut(s) 158
FaeI CATG 1 cut(s) 184
FaiI YATR 7 cut(s) 81, 182, 224, 362, 390, 489, 495
FatI CATG 1 cut(s) 180
Fnu4HI GCNGC 1 cut(s) 72
Fsp4HI GCNGC 1 cut(s) 72
FspBI CTAG 1 cut(s) 342
GluI GCNGC 1 cut(s) 72
GsaI CCCAGC 1 cut(s) 322
HaeIII GGCC 1 cut(s) 279
Hin1II CATG 1 cut(s) 184
HincII GTYRAC 2 cut(s) 27, 53
HindII GTYRAC 2 cut(s) 27, 53
HinfI GANTC 4 cut(s) 11, 89, 113, 463
HpaI GTTAAC 1 cut(s) 27
HphI GGTGA 4 cut(s) 9, 307, 339, 388
Hpy166II GTNNAC 4 cut(s) 27, 53, 294, 379
Hpy188I TCNGA 4 cut(s) 10, 88, 94, 403
Hpy188III TCNNGA 2 cut(s) 61, 100
Hpy8I GTNNAC 4 cut(s) 27, 53, 294, 379
Hpy99I CGWCG 1 cut(s) 71
HpyAV CCTTC 2 cut(s) 326, 423
HpyCH4III ACNGT 2 cut(s) 24, 298
HpyCH4V TGCA 1 cut(s) 440
HpyF10VI GCNNNNNNNGC 2 cut(s) 333, 342
HpyF3I CTNAG 1 cut(s) 459
Hsp92II CATG 1 cut(s) 184
KspAI GTTAAC 1 cut(s) 27
Kzo9I GATC 3 cut(s) 63, 302, 312
LpnPI CCDG 8 cut(s) 61, 74, 85, 161, 293, 332, 410, 486
Lsp1109I GCAGC 1 cut(s) 58
MaeI CTAG 1 cut(s) 342
MaeIII GTNAC 1 cut(s) 15
MalI GATC 3 cut(s) 65, 304, 314
MboI GATC 3 cut(s) 63, 302, 312
MboII GAAGA 3 cut(s) 108, 151, 462
MhlI GDGCHC 1 cut(s) 254
MlsI TGGCCA 1 cut(s) 279
MluCI AATT 3 cut(s) 201, 393, 471
MluNI TGGCCA 1 cut(s) 279
MlyI GAGTC 1 cut(s) 5
MnlI CCTC 1 cut(s) 303
Mox20I TGGCCA 1 cut(s) 279
MscI TGGCCA 1 cut(s) 279
MseI TTAA 5 cut(s) 26, 126, 215, 513, 529
Msp20I TGGCCA 1 cut(s) 279
MwoI GCNNNNNNNGC 2 cut(s) 333, 342
NdeII GATC 3 cut(s) 63, 302, 312
NlaIII CATG 1 cut(s) 184
NlaIV GGNNCC 1 cut(s) 178
NmuCI GTSAC 1 cut(s) 15
PcsI WCGNNNNNNNCGW 2 cut(s) 11, 20
PfeI GAWTC 3 cut(s) 89, 113, 463
PkrI GCNGC 1 cut(s) 73
PleI GAGTC 1 cut(s) 5
PpsI GAGTC 1 cut(s) 5
PspFI CCCAGC 1 cut(s) 318
PspN4I GGNNCC 1 cut(s) 178
PspPI GGNCC 1 cut(s) 356
PstNI CAGNNNCTG 1 cut(s) 136
SaqAI TTAA 5 cut(s) 26, 126, 215, 513, 529
SatI GCNGC 1 cut(s) 72
Sau3AI GATC 3 cut(s) 63, 302, 312
Sau96I GGNCC 1 cut(s) 356
SchI GAGTC 1 cut(s) 5
SduI GDGCHC 1 cut(s) 254
SetI ASST 3 cut(s) 221, 347, 487
SinI GGWCC 1 cut(s) 356
Sse9I AATT 3 cut(s) 201, 393, 471
SsiI CCGC 1 cut(s) 174
SspMI CTAG 1 cut(s) 342
TaaI ACNGT 2 cut(s) 24, 298
TaqI TCGA 3 cut(s) 111, 383, 448
TasI AATT 3 cut(s) 201, 393, 471
TfiI GAWTC 3 cut(s) 89, 113, 463
Tru1I TTAA 5 cut(s) 26, 126, 215, 513, 529
Tru9I TTAA 5 cut(s) 26, 126, 215, 513, 529
TscAI CASTG 3 cut(s) 137, 301, 334
TseFI GTSAC 1 cut(s) 15
TseI GCWGC 1 cut(s) 71
Tsp45I GTSAC 1 cut(s) 15
TspDTI ATGAA 2 cut(s) 200, 405
TspRI CASTG 3 cut(s) 137, 301, 334
VpaK11BI GGWCC 1 cut(s) 356
XapI RAATTY 1 cut(s) 393
XcmI CCANNNNNNNNNTGG 2 cut(s) 155, 358
XspI CTAG 1 cut(s) 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.