Rh5DG351000

Beta-galactosidase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
48452262 .. 48454598
2337 bp
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UTR
Exon/CDS
Intron
Rh5DG351000.1

Sequence Viewer

Length: 207 bp
ATGGCTGCATTGCTTTCTGCAACTTCCGTGAGGAACAAAACATTGAAGGGTAAGTTCGCCCAGTATCATGTTCCTCGGTATTGGCTCAAGCCATCCCAAAATTTGTTGGTGGTATTTGAGGAGCTTGCTGGCGATGTTACAAAGATTGATCTTCTGAAAGTCACCCACGTGTTGAGAAATGGCAGACCAAGAACTGAGGCAAACTGA

Protein Analysis

68

Amino Acids

7.7

Weight (kDa)

10.2

Isoelectric Point (pI)

23.68

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 1 cut(s) 100
AcvI CACGTG 1 cut(s) 169
AflIII ACRYGT 1 cut(s) 168
AgsI TTSAA 1 cut(s) 46
AleI CACNNNNGTG 1 cut(s) 167
AluBI AGCT 1 cut(s) 124
AluI AGCT 1 cut(s) 124
ApeKI GCWGC 1 cut(s) 5
ApoI RAATTY 1 cut(s) 100
AsuHPI GGTGA 1 cut(s) 154
BbrPI CACGTG 1 cut(s) 169
BccI CCATC 1 cut(s) 100
BisI GCNGC 1 cut(s) 6
BlsI GCNGC 1 cut(s) 7
BmrI ACTGGG 1 cut(s) 55
BmuI ACTGGG 1 cut(s) 55
BpuEI CTTGAG 1 cut(s) 71
BsaAI YACGTR 1 cut(s) 169
BsaJI CCNNGG 1 cut(s) 74
Bse1I ACTGG 1 cut(s) 61
Bse3DI GCAATG 1 cut(s) 8
BseDI CCNNGG 1 cut(s) 74
BseGI GGATG 1 cut(s) 92
BseMI GCAATG 1 cut(s) 8
BseMII CTCAG 1 cut(s) 186
BseNI ACTGG 1 cut(s) 61
BseRI GAGGAG 1 cut(s) 134
Bsp143I GATC 1 cut(s) 148
BspCNI CTCAG 1 cut(s) 187
BsrDI GCAATG 1 cut(s) 8
BsrI ACTGG 1 cut(s) 61
BssECI CCNNGG 1 cut(s) 74
BssMI GATC 1 cut(s) 148
BstBAI YACGTR 1 cut(s) 169
BstC8I GCNNGC 2 cut(s) 126, 130
BstDEI CTNAG 1 cut(s) 195
BstF5I GGATG 1 cut(s) 92
BstKTI GATC 1 cut(s) 151
BstMBI GATC 1 cut(s) 148
BtgZI GCGATG 1 cut(s) 147
BtsCI GGATG 1 cut(s) 92
Cac8I GCNNGC 2 cut(s) 126, 130
CviAII CATG 1 cut(s) 68
CviJI RGCY 4 cut(s) 5, 85, 91, 124
CviKI_1 RGCY 4 cut(s) 5, 85, 91, 124
DdeI CTNAG 1 cut(s) 195
DpnI GATC 1 cut(s) 150
DpnII GATC 1 cut(s) 148
Eco72I CACGTG 1 cut(s) 169
FaeI CATG 1 cut(s) 71
FaiI YATR 1 cut(s) 69
FatI CATG 1 cut(s) 67
Fnu4HI GCNGC 1 cut(s) 6
FokI GGATG 1 cut(s) 79
Fsp4HI GCNGC 1 cut(s) 6
GluI GCNGC 1 cut(s) 6
Hin1II CATG 1 cut(s) 71
HphI GGTGA 1 cut(s) 154
Hpy188I TCNGA 1 cut(s) 156
HpyAV CCTTC 1 cut(s) 40
HpyCH4IV ACGT 1 cut(s) 168
HpyCH4V TGCA 2 cut(s) 8, 20
HpyF3I CTNAG 1 cut(s) 195
HpySE526I ACGT 1 cut(s) 168
Hsp92II CATG 1 cut(s) 71
Kzo9I GATC 1 cut(s) 148
LmnI GCTCC 1 cut(s) 121
LpnPI CCDG 2 cut(s) 74, 114
MaeII ACGT 1 cut(s) 168
MaeIII GTNAC 2 cut(s) 136, 160
MalI GATC 1 cut(s) 150
MboI GATC 1 cut(s) 148
MboII GAAGA 1 cut(s) 143
MluCI AATT 1 cut(s) 100
MnlI CCTC 4 cut(s) 24, 84, 112, 190
MslI CAYNNNNRTG 1 cut(s) 167
NdeII GATC 1 cut(s) 148
NlaIII CATG 1 cut(s) 71
NmuCI GTSAC 1 cut(s) 160
OliI CACNNNNGTG 1 cut(s) 167
PkrI GCNGC 1 cut(s) 7
PmaCI CACGTG 1 cut(s) 169
PmlI CACGTG 1 cut(s) 169
Ppu21I YACGTR 1 cut(s) 169
PspCI CACGTG 1 cut(s) 169
RseI CAYNNNNRTG 1 cut(s) 167
SatI GCNGC 1 cut(s) 6
Sau3AI GATC 1 cut(s) 148
SetI ASST 2 cut(s) 126, 171
SmiMI CAYNNNNRTG 1 cut(s) 167
SmlI CTYRAG 1 cut(s) 86
SmoI CTYRAG 1 cut(s) 86
Sse9I AATT 1 cut(s) 100
TaiI ACGT 1 cut(s) 171
TasI AATT 1 cut(s) 100
TseFI GTSAC 1 cut(s) 160
TseI GCWGC 1 cut(s) 5
Tsp45I GTSAC 1 cut(s) 160
TspGWI ACGGA 1 cut(s) 16
XapI RAATTY 1 cut(s) 100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.