transposition, RNA-mediated
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| gag-asp_proteas | PF13975 | 521 - 609 | 1.8e-07 | gag-polyprotein putative aspartyl protease |
| RVP_2 | PF08284 | 525 - 610 | 3.7e-08 | Retroviral aspartyl protease |
| RVT_1 | PF00078 | 759 - 829 | 4.5e-12 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| RT_RNaseH_2 | PF17919 | 923 - 969 | 1.8e-13 | RNase H-like domain found in reverse transcriptase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2107 |
| Acc36I | ACCTGC | 2 cut(s) | 1805, 2107 |
| AccII | CGCG | 1 cut(s) | 586 |
| AciI | CCGC | 2 cut(s) | 20, 975 |
| AclI | AACGTT | 1 cut(s) | 1683 |
| AclWI | GGATC | 6 cut(s) | 184, 325, 423, 917, 930, 2424 |
| AcoI | YGGCCR | 3 cut(s) | 1692, 1923, 2491 |
| AcsI | RAATTY | 9 cut(s) | 71, 1022, 1064, 1109, 1349, 2501, 2710, 2842, 2855 |
| AcuI | CTGAAG | 4 cut(s) | 333, 1661, 2043, 2796 |
| AfaI | GTAC | 7 cut(s) | 87, 223, 267, 396, 887, 1016, 2293 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 162, 848, 907, 1186, 1509, 1790, 1884 |
| AflII | CTTAAG | 1 cut(s) | 2014 |
| AflIII | ACRYGT | 1 cut(s) | 2575 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2317 |
| AjnI | CCWGG | 3 cut(s) | 81, 1135, 1375 |
| Alw21I | GWGCWC | 5 cut(s) | 81, 180, 435, 1135, 1665 |
| Alw26I | GTCTC | 4 cut(s) | 1256, 1521, 2777, 2804 |
| Alw44I | GTGCAC | 1 cut(s) | 1661 |
| AlwI | GGATC | 6 cut(s) | 184, 325, 423, 917, 930, 2424 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1639 |
| AoxI | GGCC | 8 cut(s) | 486, 1177, 1236, 1378, 1692, 1923, 2237, 2491 |
| ApaLI | GTGCAC | 1 cut(s) | 1661 |
| ApeKI | GCWGC | 3 cut(s) | 1996, 2330, 2453 |
| ApoI | RAATTY | 9 cut(s) | 71, 1022, 1064, 1109, 1349, 2501, 2710, 2842, 2855 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2505 |
| AspS9I | GGNCC | 5 cut(s) | 246, 487, 647, 1474, 2319 |
| AsuNHI | GCTAGC | 1 cut(s) | 716 |
| AvaII | GGWCC | 4 cut(s) | 246, 647, 1474, 2319 |
| AxyI | CCTNAGG | 1 cut(s) | 1038 |
| BaeGI | GKGCMC | 2 cut(s) | 1649, 1665 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 869, 902 |
| BalI | TGGCCA | 3 cut(s) | 1694, 1925, 2493 |
| BamHI | GGATCC | 1 cut(s) | 922 |
| BanII | GRGCYC | 3 cut(s) | 81, 1135, 2774 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 1884, 1916 |
| BbsI | GAAGAC | 3 cut(s) | 1370, 1561, 1718 |
| Bbv12I | GWGCWC | 5 cut(s) | 81, 180, 435, 1135, 1665 |
| BbvI | GCAGC | 3 cut(s) | 2008, 2342, 2465 |
| BciT130I | CCWGG | 3 cut(s) | 83, 1137, 1377 |
| BclI | TGATCA | 1 cut(s) | 1009 |
| BcoDI | GTCTC | 4 cut(s) | 1256, 1521, 2777, 2804 |
| BfaI | CTAG | 6 cut(s) | 678, 717, 1221, 1251, 1544, 1832 |
| BfmI | CTRYAG | 3 cut(s) | 122, 390, 2314 |
| BfrI | CTTAAG | 1 cut(s) | 2014 |
| BfuAI | ACCTGC | 2 cut(s) | 1805, 2107 |
| BglII | AGATCT | 4 cut(s) | 982, 1296, 1826, 2423 |
| BisI | GCNGC | 3 cut(s) | 1997, 2331, 2454 |
| BlpI | GCTNAGC | 1 cut(s) | 234 |
| BlsI | GCNGC | 3 cut(s) | 1998, 2332, 2455 |
| BmcAI | AGTACT | 2 cut(s) | 223, 1016 |
| Bme1390I | CCNGG | 3 cut(s) | 83, 1137, 1377 |
| Bme18I | GGWCC | 4 cut(s) | 246, 647, 1474, 2319 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2317 |
| BmgT120I | GGNCC | 5 cut(s) | 246, 487, 647, 1474, 2319 |
| BmiI | GGNNCC | 6 cut(s) | 247, 912, 924, 1476, 2321, 2771 |
| BmrFI | CCNGG | 3 cut(s) | 83, 1137, 1377 |
| BmsI | GCATC | 3 cut(s) | 607, 794, 2863 |
| BmtI | GCTAGC | 1 cut(s) | 720 |
| BpiI | GAAGAC | 3 cut(s) | 1370, 1561, 1718 |
| BpmI | CTGGAG | 6 cut(s) | 65, 185, 258, 516, 1131, 2656 |
| Bpu10I | CCTNAGC | 2 cut(s) | 157, 2556 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 234 |
| BpuEI | CTTGAG | 1 cut(s) | 2096 |
| BsaJI | CCNNGG | 1 cut(s) | 2850 |
| BsaWI | WCCGGW | 1 cut(s) | 644 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 804, 834, 2290, 2320 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 162, 848, 907, 1186, 1509, 1790, 1884 |
| Bse21I | CCTNAGG | 1 cut(s) | 1038 |
| Bse3DI | GCAATG | 1 cut(s) | 2512 |
| BseBI | CCWGG | 3 cut(s) | 83, 1137, 1377 |
| BseDI | CCNNGG | 1 cut(s) | 2850 |
| BseGI | GGATG | 7 cut(s) | 132, 247, 514, 639, 1207, 2087, 2374 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 162, 848, 907, 1186, 1509, 1790, 1884 |
| BseMI | GCAATG | 1 cut(s) | 2512 |
| BseRI | GAGGAG | 2 cut(s) | 678, 1448 |
| BseSI | GKGCMC | 2 cut(s) | 1649, 1665 |
| BseXI | GCAGC | 3 cut(s) | 2008, 2342, 2465 |
| BseYI | CCCAGC | 1 cut(s) | 161 |
| BsgI | GTGCAG | 4 cut(s) | 1300, 2015, 2228, 2607 |
| Bsh1236I | CGCG | 1 cut(s) | 586 |
| BshFI | GGCC | 8 cut(s) | 488, 1179, 1238, 1380, 1694, 1925, 2239, 2493 |
| BsiHKAI | GWGCWC | 5 cut(s) | 81, 180, 435, 1135, 1665 |
| BsiSI | CCGG | 2 cut(s) | 239, 645 |
| BslFI | GGGAC | 5 cut(s) | 259, 815, 1460, 2305, 2586 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 162, 848, 907, 1186, 1509, 1790, 1884 |
| BsmAI | GTCTC | 4 cut(s) | 1256, 1521, 2777, 2804 |
| BsmFI | GGGAC | 5 cut(s) | 259, 815, 1460, 2305, 2586 |
| BsmI | GAATGC | 1 cut(s) | 2455 |
| BsnI | GGCC | 8 cut(s) | 488, 1179, 1238, 1380, 1694, 1925, 2239, 2493 |
| Bsp1286I | GDGCHC | 7 cut(s) | 81, 180, 435, 1135, 1649, 1665, 2774 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 234 |
| BspACI | CCGC | 2 cut(s) | 20, 975 |
| BspANI | GGCC | 8 cut(s) | 488, 1179, 1238, 1380, 1694, 1925, 2239, 2493 |
| BspFNI | CGCG | 1 cut(s) | 586 |
| BspHI | TCATGA | 1 cut(s) | 180 |
| BspLI | GGNNCC | 6 cut(s) | 247, 912, 924, 1476, 2321, 2771 |
| BspMAI | CTGCAG | 1 cut(s) | 126 |
| BspMI | ACCTGC | 2 cut(s) | 1805, 2107 |
| BspOI | GCTAGC | 1 cut(s) | 720 |
| BspPI | GGATC | 6 cut(s) | 184, 325, 423, 917, 930, 2424 |
| BspQI | GCTCTTC | 1 cut(s) | 2019 |
| BspTI | CTTAAG | 1 cut(s) | 2014 |
| BsrDI | GCAATG | 1 cut(s) | 2512 |
| BssECI | CCNNGG | 1 cut(s) | 2850 |
| BssT1I | CCWWGG | 1 cut(s) | 2850 |
| Bst2UI | CCWGG | 3 cut(s) | 83, 1137, 1377 |
| Bst4CI | ACNGT | 7 cut(s) | 250, 749, 1921, 1930, 1959, 2653, 2798 |
| Bst6I | CTCTTC | 3 cut(s) | 1425, 2019, 2263 |
| BstAFI | CTTAAG | 1 cut(s) | 2014 |
| BstC8I | GCNNGC | 8 cut(s) | 126, 486, 551, 718, 1053, 1165, 1181, 2682 |
| BstENI | CCTNNNNNAGG | 3 cut(s) | 846, 1184, 1507 |
| BstF5I | GGATG | 7 cut(s) | 132, 247, 514, 639, 1207, 2087, 2374 |
| BstFNI | CGCG | 1 cut(s) | 586 |
| BstMAI | GTCTC | 4 cut(s) | 1256, 1521, 2777, 2804 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 113, 211, 485, 1700, 1744, 2786 |
| BstNI | CCWGG | 3 cut(s) | 83, 1137, 1377 |
| BstNSI | RCATGY | 1 cut(s) | 2579 |
| BstSCI | CCNGG | 3 cut(s) | 81, 1135, 1375 |
| BstSFI | CTRYAG | 3 cut(s) | 122, 390, 2314 |
| BstSLI | GKGCMC | 2 cut(s) | 1649, 1665 |
| BstUI | CGCG | 1 cut(s) | 586 |
| BstV1I | GCAGC | 3 cut(s) | 2008, 2342, 2465 |
| BstV2I | GAAGAC | 3 cut(s) | 1370, 1561, 1718 |
| BstX2I | RGATCY | 8 cut(s) | 189, 415, 922, 982, 1296, 1826, 2416, 2423 |
| BstYI | RGATCY | 8 cut(s) | 189, 415, 922, 982, 1296, 1826, 2416, 2423 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1038 |
| BsuRI | GGCC | 8 cut(s) | 488, 1179, 1238, 1380, 1694, 1925, 2239, 2493 |
| BtgZI | GCGATG | 1 cut(s) | 567 |
| BtsCI | GGATG | 7 cut(s) | 132, 247, 514, 639, 1207, 2087, 2374 |
| BtsI | GCAGTG | 3 cut(s) | 102, 728, 2834 |
| BveI | ACCTGC | 2 cut(s) | 1805, 2107 |
| Cac8I | GCNNGC | 8 cut(s) | 126, 486, 551, 718, 1053, 1165, 1181, 2682 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1639 |
| CciI | TCATGA | 1 cut(s) | 180 |
| Cfr13I | GGNCC | 5 cut(s) | 246, 487, 647, 1474, 2319 |
| Csp6I | GTAC | 7 cut(s) | 86, 222, 266, 395, 886, 1015, 2292 |
| CviQI | GTAC | 7 cut(s) | 86, 222, 266, 395, 886, 1015, 2292 |
| DraI | TTTAAA | 2 cut(s) | 1680, 2764 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2317 |
| EaeI | YGGCCR | 3 cut(s) | 1692, 1923, 2491 |
| Eam1104I | CTCTTC | 3 cut(s) | 1425, 2019, 2263 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2317 |
| EarI | CTCTTC | 3 cut(s) | 1425, 2019, 2263 |
| Ecl136II | GAGCTC | 2 cut(s) | 79, 1133 |
| Eco130I | CCWWGG | 1 cut(s) | 2850 |
| Eco147I | AGGCCT | 1 cut(s) | 1238 |
| Eco24I | GRGCYC | 3 cut(s) | 81, 1135, 2774 |
| Eco32I | GATATC | 2 cut(s) | 512, 2171 |
| Eco47I | GGWCC | 4 cut(s) | 246, 647, 1474, 2319 |
| Eco53kI | GAGCTC | 2 cut(s) | 79, 1133 |
| Eco57I | CTGAAG | 4 cut(s) | 333, 1661, 2043, 2796 |
| Eco81I | CCTNAGG | 1 cut(s) | 1038 |
| EcoICRI | GAGCTC | 2 cut(s) | 79, 1133 |
| EcoNI | CCTNNNNNAGG | 3 cut(s) | 846, 1184, 1507 |
| EcoO109I | RGGNCCY | 2 cut(s) | 1474, 2319 |
| EcoRI | GAATTC | 2 cut(s) | 1109, 2855 |
| EcoRII | CCWGG | 3 cut(s) | 81, 1135, 1375 |
| EcoRV | GATATC | 2 cut(s) | 512, 2171 |
| EcoT14I | CCWWGG | 1 cut(s) | 2850 |
| EcoT38I | GRGCYC | 3 cut(s) | 81, 1135, 2774 |
| ErhI | CCWWGG | 1 cut(s) | 2850 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1553, 1585, 2459, 2491 |
| FaqI | GGGAC | 5 cut(s) | 259, 815, 1460, 2305, 2586 |
| FauI | CCCGC | 1 cut(s) | 13 |
| FbaI | TGATCA | 1 cut(s) | 1009 |
| Fnu4HI | GCNGC | 3 cut(s) | 1997, 2331, 2454 |
| FokI | GGATG | 7 cut(s) | 119, 254, 501, 646, 1214, 2074, 2381 |
| FriOI | GRGCYC | 3 cut(s) | 81, 1135, 2774 |
| Fsp4HI | GCNGC | 3 cut(s) | 1997, 2331, 2454 |
| FspBI | CTAG | 6 cut(s) | 678, 717, 1221, 1251, 1544, 1832 |
| GluI | GCNGC | 3 cut(s) | 1997, 2331, 2454 |
| GsaI | CCCAGC | 1 cut(s) | 165 |
| GsuI | CTGGAG | 6 cut(s) | 65, 185, 258, 516, 1131, 2656 |
| HaeIII | GGCC | 8 cut(s) | 488, 1179, 1238, 1380, 1694, 1925, 2239, 2493 |
| HapII | CCGG | 2 cut(s) | 239, 645 |
| HincII | GTYRAC | 2 cut(s) | 2605, 2642 |
| HindII | GTYRAC | 2 cut(s) | 2605, 2642 |
| HindIII | AAGCTT | 1 cut(s) | 1049 |
| HinfI | GANTC | 5 cut(s) | 446, 1444, 1540, 1601, 2638 |
| HpaII | CCGG | 2 cut(s) | 239, 645 |
| Hpy166II | GTNNAC | 7 cut(s) | 56, 752, 1663, 1875, 2311, 2605, 2642 |
| Hpy188I | TCNGA | 5 cut(s) | 1215, 1482, 1765, 2159, 2423 |
| Hpy188III | TCNNGA | 8 cut(s) | 92, 136, 181, 311, 631, 1148, 1605, 2880 |
| Hpy8I | GTNNAC | 7 cut(s) | 56, 752, 1663, 1875, 2311, 2605, 2642 |
| HpyCH4III | ACNGT | 7 cut(s) | 250, 749, 1921, 1930, 1959, 2653, 2798 |
| HpyCH4IV | ACGT | 1 cut(s) | 1683 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 113, 211, 485, 1700, 1744, 2786 |
| HpySE526I | ACGT | 1 cut(s) | 1683 |
| Ksp22I | TGATCA | 1 cut(s) | 1009 |
| LguI | GCTCTTC | 1 cut(s) | 2019 |
| LmnI | GCTCC | 8 cut(s) | 84, 204, 691, 1138, 1607, 1700, 1811, 2769 |
| Lsp1109I | GCAGC | 3 cut(s) | 2008, 2342, 2465 |
| LweI | GCATC | 3 cut(s) | 607, 794, 2863 |
| MaeI | CTAG | 6 cut(s) | 678, 717, 1221, 1251, 1544, 1832 |
| MaeII | ACGT | 1 cut(s) | 1683 |
| MaeIII | GTNAC | 5 cut(s) | 622, 658, 805, 1635, 1786 |
| MfeI | CAATTG | 2 cut(s) | 591, 1556 |
| MflI | RGATCY | 8 cut(s) | 189, 415, 922, 982, 1296, 1826, 2416, 2423 |
| MhlI | GDGCHC | 7 cut(s) | 81, 180, 435, 1135, 1649, 1665, 2774 |
| MlsI | TGGCCA | 3 cut(s) | 1694, 1925, 2493 |
| MluNI | TGGCCA | 3 cut(s) | 1694, 1925, 2493 |
| MlyI | GAGTC | 4 cut(s) | 440, 1534, 1595, 2647 |
| MmeI | TCCRAC | 3 cut(s) | 217, 2199, 2394 |
| Mox20I | TGGCCA | 3 cut(s) | 1694, 1925, 2493 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2505 |
| MscI | TGGCCA | 3 cut(s) | 1694, 1925, 2493 |
| MseI | TTAA | 9 cut(s) | 378, 998, 1679, 1823, 1881, 1961, 2015, 2346, 2763 |
| MslI | CAYNNNNRTG | 4 cut(s) | 93, 402, 1196, 1409 |
| Msp20I | TGGCCA | 3 cut(s) | 1694, 1925, 2493 |
| MspA1I | CMGCKG | 1 cut(s) | 2456 |
| MspCI | CTTAAG | 1 cut(s) | 2014 |
| MspI | CCGG | 2 cut(s) | 239, 645 |
| MspR9I | CCNGG | 3 cut(s) | 83, 1137, 1377 |
| MunI | CAATTG | 2 cut(s) | 591, 1556 |
| Mva1269I | GAATGC | 1 cut(s) | 2455 |
| MvaI | CCWGG | 3 cut(s) | 83, 1137, 1377 |
| MvnI | CGCG | 1 cut(s) | 586 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 113, 211, 485, 1700, 1744, 2786 |
| NheI | GCTAGC | 1 cut(s) | 716 |
| NlaIV | GGNNCC | 6 cut(s) | 247, 912, 924, 1476, 2321, 2771 |
| NmuCI | GTSAC | 3 cut(s) | 622, 658, 1786 |
| NspI | RCATGY | 1 cut(s) | 2579 |
| PagI | TCATGA | 1 cut(s) | 180 |
| PaqCI | CACCTGC | 1 cut(s) | 2107 |
| PceI | AGGCCT | 1 cut(s) | 1238 |
| PciI | ACATGT | 1 cut(s) | 2575 |
| PciSI | GCTCTTC | 1 cut(s) | 2019 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 326 |
| PctI | GAATGC | 1 cut(s) | 2455 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2505 |
| PfeI | GAWTC | 1 cut(s) | 1444 |
| PkrI | GCNGC | 3 cut(s) | 1998, 2332, 2455 |
| PleI | GAGTC | 4 cut(s) | 440, 1534, 1595, 2646 |
| PpsI | GAGTC | 4 cut(s) | 440, 1534, 1595, 2646 |
| PpuMI | RGGWCCY | 2 cut(s) | 1474, 2319 |
| PscI | ACATGT | 1 cut(s) | 2575 |
| Psp124BI | GAGCTC | 2 cut(s) | 81, 1135 |
| Psp1406I | AACGTT | 1 cut(s) | 1683 |
| Psp5II | RGGWCCY | 2 cut(s) | 1474, 2319 |
| Psp6I | CCWGG | 3 cut(s) | 81, 1135, 1375 |
| PspFI | CCCAGC | 1 cut(s) | 161 |
| PspGI | CCWGG | 3 cut(s) | 81, 1135, 1375 |
| PspN4I | GGNNCC | 6 cut(s) | 247, 912, 924, 1476, 2321, 2771 |
| PspPI | GGNCC | 5 cut(s) | 246, 487, 647, 1474, 2319 |
| PspPPI | RGGWCCY | 2 cut(s) | 1474, 2319 |
| PstI | CTGCAG | 1 cut(s) | 126 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1639 |
| PsuI | RGATCY | 8 cut(s) | 189, 415, 922, 982, 1296, 1826, 2416, 2423 |
| PvuII | CAGCTG | 1 cut(s) | 2456 |
| RsaI | GTAC | 7 cut(s) | 87, 223, 267, 396, 887, 1016, 2293 |
| RsaNI | GTAC | 7 cut(s) | 86, 222, 266, 395, 886, 1015, 2292 |
| RseI | CAYNNNNRTG | 4 cut(s) | 93, 402, 1196, 1409 |
| SacI | GAGCTC | 2 cut(s) | 81, 1135 |
| SapI | GCTCTTC | 1 cut(s) | 2019 |
| SaqAI | TTAA | 9 cut(s) | 378, 998, 1679, 1823, 1881, 1961, 2015, 2346, 2763 |
| SatI | GCNGC | 3 cut(s) | 1997, 2331, 2454 |
| Sau96I | GGNCC | 5 cut(s) | 246, 487, 647, 1474, 2319 |
| ScaI | AGTACT | 2 cut(s) | 223, 1016 |
| SchI | GAGTC | 4 cut(s) | 440, 1534, 1595, 2647 |
| ScrFI | CCNGG | 3 cut(s) | 83, 1137, 1377 |
| SduI | GDGCHC | 7 cut(s) | 81, 180, 435, 1135, 1649, 1665, 2774 |
| SfaNI | GCATC | 3 cut(s) | 607, 794, 2863 |
| SfcI | CTRYAG | 3 cut(s) | 122, 390, 2314 |
| SinI | GGWCC | 4 cut(s) | 246, 647, 1474, 2319 |
| SmiI | ATTTAAAT | 1 cut(s) | 2764 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 93, 402, 1196, 1409 |
| SmlI | CTYRAG | 2 cut(s) | 2014, 2075 |
| SmoI | CTYRAG | 2 cut(s) | 2014, 2075 |
| SseBI | AGGCCT | 1 cut(s) | 1238 |
| SsiI | CCGC | 2 cut(s) | 20, 975 |
| SspMI | CTAG | 6 cut(s) | 678, 717, 1221, 1251, 1544, 1832 |
| SstI | GAGCTC | 2 cut(s) | 81, 1135 |
| StuI | AGGCCT | 1 cut(s) | 1238 |
| StyD4I | CCNGG | 3 cut(s) | 81, 1135, 1375 |
| StyI | CCWWGG | 1 cut(s) | 2850 |
| SwaI | ATTTAAAT | 1 cut(s) | 2764 |
| TaaI | ACNGT | 7 cut(s) | 250, 749, 1921, 1930, 1959, 2653, 2798 |
| TaiI | ACGT | 1 cut(s) | 1686 |
| TaqI | TCGA | 3 cut(s) | 91, 1538, 2619 |
| TatI | WGTACW | 3 cut(s) | 221, 394, 1014 |
| TfiI | GAWTC | 1 cut(s) | 1444 |
| Tru1I | TTAA | 9 cut(s) | 378, 998, 1679, 1823, 1881, 1961, 2015, 2346, 2763 |
| Tru9I | TTAA | 9 cut(s) | 378, 998, 1679, 1823, 1881, 1961, 2015, 2346, 2763 |
| TseFI | GTSAC | 3 cut(s) | 622, 658, 1786 |
| TseI | GCWGC | 3 cut(s) | 1996, 2330, 2453 |
| Tsp45I | GTSAC | 3 cut(s) | 622, 658, 1786 |
| TspGWI | ACGGA | 2 cut(s) | 133, 646 |
| Vha464I | CTTAAG | 1 cut(s) | 2014 |
| VneI | GTGCAC | 1 cut(s) | 1661 |
| VpaK11BI | GGWCC | 4 cut(s) | 246, 647, 1474, 2319 |
| XagI | CCTNNNNNAGG | 3 cut(s) | 846, 1184, 1507 |
| XapI | RAATTY | 9 cut(s) | 71, 1022, 1064, 1109, 1349, 2501, 2710, 2842, 2855 |
| XceI | RCATGY | 1 cut(s) | 2579 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2505 |
| XspI | CTAG | 6 cut(s) | 678, 717, 1221, 1251, 1544, 1832 |
| ZrmI | AGTACT | 2 cut(s) | 223, 1016 |