AT1G08300

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
1
OG0000582
Physical Location & Seq
Forward (+)
2614774 .. 2618823
4050 bp
Loading structure...
UTR
Exon/CDS
Intron
AT1G08300.2

Sequence Viewer

Length: 2241 bp
ATGTTTCCTTTTGTTGACCGATACAATGACTGTATATTCAAAAAATTACTTTTAGACATCCAAATTATATTTTCATCTATCAATTACAATATTATGAAAATTATATATTTACAGATGCTAAATCAAAAACGCTTTTTATTTTCCTCGTTTTTGCGCCGACCAATGCAAGGGAATCGCGACGGCTCGTGGTCACTACGCGCCTCCGCGTACGGTGGAAGCGGCAATGGAAACGGAGGGTATCTTCCTCAAACGACTCCTGTATTTCACAATTACATTGTCAAACAACAACAACCCATCAGATACAATTTCCAGACGCAGCAGAATCTCAATTTCCCTCATCCACAATTTGGCGGCGGCGCTAATGTAGAACTTATTCGAATTGATAAGGCCGTAAACAATACGCGTAAATCATTAATTGCTGCTGGAGACAACGTATCTTCGACTAGAGTTTCGCAATCGGTTTTAGCACAACTTCAGGCTGACACTTGGCGTTCCTTGGGGATATGGATGCAAGATGTTCCTTCGCTTCGCCAACTCATGGCCCTTGAAGGCAAGATCATTGCATTTATTCACTGCTTCATTGGCGCTAGAGGAATCGTGACATTGCATGATTTGGAAGTGGCAATATGCCAAAACGAGTTTGTTGGTTGTTTTGATGATCTGGGATTGGGACCTTTGCTGCAGCATCCACTTGTCTTGCTCTATTTTCCATCCGTCTATTGTTCTACTGCCCCAGTTAAGATCACTAGTGAGGAGATAATATCATTACTTGATAGCTATCTAAACACTTACGATATTGACGATGTTAAGCTCGATGAATTCCTGGATTTTGTTGCTGAGGCTAAAGCAGTTACAAGCAAGGAAAAGCTTGGTGTCCGTATTCAGAACTTGCGGATGTATGTATCTTTCATTCAAGATGCGAAGAGACAAGAAGGCGAAATATTGAAGATCGTATTGACTGAACTGCATCAGAAGTATCGCATCCTCTCATCAAAGAAACAACGGCAAGATAAGGATTATTGTGGCAAGCATACAAGATTTAATTCACCGAGCTCGGAGGAAAATGATAGTGCTGATTATGAGGTTGAAAATGTTAAAAGATCTGACCATTTCAGTAGTTGTCCGTATTCATCTGCTGAAGAAGAGGTTAAGCAGCTTGGGAGCTCCAGTAAGAAAAGGAAGGCTGAAAGTCGTAATCATGAAAAATCTGATTCTCCCAAGCTGCTTAGAAGAGGCCCCTCTAAGTTGCGTAGAGGACATGTGAAACAAAAGATACCTAAATCGGCAGATGATTCTGATGCGCAGATTTTCAGTGTCAATGACGCTGATTTCACTCTTTCTGAAGGAGCTTTGAAATTGTTCATCTCAACTTGGAAGGAAACATGTAAAGAGCTAAGCATCTCAGTGTTTGTCAAGAAATTGTTGTCTTTTTACAACTTGGGGGGATCCGAAGTACACGGTCAGATTAAAATAGCTACAGCTGTGTCCTCATTTCCATTTGTTGGATTACTACATGTCGCTAAGGAGCTTGTAACAGAGGCTCTTGAAGAACAGATACCGACTGAAATCACAATTACAAACTTGGTTGCTGGATATAATGATTGTACAGGCACAAGGTCCCGAGCGAATATGCCAAACCCGACGAAGAGTTGCTCAACGCCAGTGACTCTTGCTCATAATTCCGTCTCAACTGACTTCAGCATAAGAAATCAGCTTCATACCGGCGCACTTTGGGCTGCACAGGCGCAAGAGTCCGGTAAAAAAGGTGAAGAAATAGCTTACAGATACTTTGTTGCAAAATATGGCAAGAAGGCACTGGTTAAATGGGTTAATGAGCATAGTGAAACCGGATTACCTTACGACCTTATCATCGAAAACAGAGGAGGTAACAAAGAGTACGTAGAGGTGAAAGCAACTGTATCCACAGGGAAAGACTATTTCAATTTGTCAGTGAAGGAATGGGAGTTTGCCAATGAGAAAGGAGAGAGTTACGTTATAGCTCATGTTTTATTAGGCAACAGTAATGCCATCCTCACACAACAAAGGAATCTTGTCAAATTACGCCAAGACGGTCATCTCCGGTTATTGATTCTCATGCCTAGCCAGCGAAACGAGGGAATATTCGAAAATCATCCCCAAAATAAGAACAGACTGAGGAACAAGATTGAGATTGGTGAGTTGGCTGTGGCGTCTGGAGTTTTACAAAGCTGTAAACTAAGACAGCTAAAGGATCAAGTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

746

Amino Acids

84.09

Weight (kDa)

8.91

Isoelectric Point (pI)

42.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NOV_C PF13020 535 - 621 1.4e-21 Protein NO VEIN, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 1302
AccB7I CCANNNNNTGG 3 cut(s) 347, 538, 1502
AccII CGCG 4 cut(s) 177, 198, 206, 403
AciI CCGC 5 cut(s) 204, 219, 351, 354, 892
AclWI GGATC 3 cut(s) 1440, 1453, 2238
AcsI RAATTY 1 cut(s) 818
AcuI CTGAAG 4 cut(s) 458, 1158, 1362, 1681
AcyI GRCGYC 1 cut(s) 2189
AfaI GTAC 4 cut(s) 209, 1455, 1606, 1898
AfiI CCNNNNNNNGG 4 cut(s) 167, 347, 538, 1502
AflIII ACRYGT 4 cut(s) 401, 1258, 1382, 1513
AgsI TTSAA 8 cut(s) 40, 548, 914, 946, 1088, 1354, 1547, 1942
AhlI ACTAGT 1 cut(s) 746
AjnI CCWGG 1 cut(s) 822
Alw21I GWGCWC 2 cut(s) 1055, 1166
Alw26I GTCTC 3 cut(s) 420, 919, 1690
AlwI GGATC 3 cut(s) 1440, 1453, 2238
Ama87I CYCGRG 1 cut(s) 1620
AoxI GGCC 3 cut(s) 387, 540, 1234
ApeKI GCWGC 7 cut(s) 316, 419, 679, 682, 1153, 1222, 1736
ApoI RAATTY 1 cut(s) 818
ArsI GACNNNNNNTTYG 2 cut(s) 433, 465
AseI ATTAAT 1 cut(s) 413
Asp700I GAANNNNTTC 2 cut(s) 372, 1358
AspLEI GCGC 7 cut(s) 156, 200, 359, 587, 1303, 1727, 1747
AspS9I GGNCC 4 cut(s) 541, 671, 1235, 1617
AsuHPI GGTGA 4 cut(s) 1038, 1778, 1918, 2186
AsuII TTCGAA 2 cut(s) 376, 2124
AvaI CYCGRG 1 cut(s) 1620
AvaII GGWCC 2 cut(s) 671, 1617
BamHI GGATCC 1 cut(s) 1445
BanII GRGCYC 2 cut(s) 1055, 1166
BarI GAAGNNNNNNTAC 2 cut(s) 1539, 1571
BauI CACGAG 1 cut(s) 184
Bbv12I GWGCWC 2 cut(s) 1055, 1166
BbvCI CCTCAGC 1 cut(s) 837
BbvI GCAGC 7 cut(s) 328, 406, 666, 694, 1165, 1209, 1723
BccI CCATC 3 cut(s) 302, 718, 2036
BceAI ACGGC 3 cut(s) 196, 374, 1019
BcgI CGANNNNNNTGC 2 cut(s) 155, 189
BciT130I CCWGG 1 cut(s) 824
BciVI GTATCC 1 cut(s) 1930
BcoDI GTCTC 3 cut(s) 420, 919, 1690
BcuI ACTAGT 1 cut(s) 746
BfaI CTAG 4 cut(s) 444, 588, 747, 2100
BfmI CTRYAG 2 cut(s) 680, 1476
BfoI RGCGCY 2 cut(s) 360, 588
BfuI GTATCC 1 cut(s) 1930
BglII AGATCT 1 cut(s) 1100
BlpI GCTNAGC 1 cut(s) 1394
Bme1390I CCNGG 1 cut(s) 824
Bme18I GGWCC 2 cut(s) 671, 1617
BmeT110I CYCGRG 1 cut(s) 1620
BmgT120I GGNCC 4 cut(s) 541, 671, 1235, 1617
BmiI GGNNCC 4 cut(s) 672, 1237, 1447, 1619
BmrFI CCNGG 1 cut(s) 824
BmrI ACTGGG 1 cut(s) 728
BmsI GCATC 8 cut(s) 105, 498, 694, 907, 976, 990, 1288, 1407
BmuI ACTGGG 1 cut(s) 728
BpmI CTGGAG 3 cut(s) 444, 1150, 2214
Bpu10I CCTNAGC 2 cut(s) 837, 1521
Bpu1102I GCTNAGC 1 cut(s) 1394
Bpu14I TTCGAA 2 cut(s) 376, 2124
BsaAI YACGTR 1 cut(s) 1900
BsaBI GATNNNNATC 1 cut(s) 777
BsaHI GRCGYC 1 cut(s) 2189
BsaJI CCNNGG 1 cut(s) 495
BsaWI WCCGGW 3 cut(s) 1754, 1847, 2079
BsaXI ACNNNNNCTCC 4 cut(s) 417, 447, 1153, 1183
Bsc4I CCNNNNNNNGG 4 cut(s) 167, 347, 538, 1502
Bse118I RCCGGY 1 cut(s) 1721
Bse1I ACTGG 4 cut(s) 734, 1167, 1661, 1821
Bse3DI GCAATG 3 cut(s) 229, 558, 602
Bse8I GATNNNNATC 1 cut(s) 777
BseBI CCWGG 1 cut(s) 824
BseDI CCNNGG 1 cut(s) 495
BseGI GGATG 9 cut(s) 57, 337, 513, 685, 710, 900, 981, 2028, 2131
BseJI GATNNNNATC 1 cut(s) 777
BseLI CCNNNNNNNGG 4 cut(s) 167, 347, 538, 1502
BseMI GCAATG 3 cut(s) 229, 558, 602
BseMII CTCAG 3 cut(s) 828, 1416, 2144
BseNI ACTGG 4 cut(s) 734, 1167, 1661, 1821
BseRI GAGGAG 2 cut(s) 767, 1896
BseXI GCAGC 7 cut(s) 328, 406, 666, 694, 1165, 1209, 1723
BsgI GTGCAG 1 cut(s) 1722
Bsh1236I CGCG 4 cut(s) 177, 198, 206, 403
BshFI GGCC 3 cut(s) 389, 542, 1236
BsiHKAI GWGCWC 2 cut(s) 1055, 1166
BsiHKCI CYCGRG 1 cut(s) 1620
BsiSI CCGG 4 cut(s) 1722, 1755, 1848, 2080
BsiWI CGTACG 1 cut(s) 207
BslFI GGGAC 2 cut(s) 684, 1603
BslI CCNNNNNNNGG 4 cut(s) 167, 347, 538, 1502
BsmAI GTCTC 3 cut(s) 420, 919, 1690
BsmBI CGTCTC 1 cut(s) 1690
BsmFI GGGAC 2 cut(s) 684, 1603
BsnI GGCC 3 cut(s) 389, 542, 1236
BsoBI CYCGRG 1 cut(s) 1620
Bsp119I TTCGAA 2 cut(s) 376, 2124
Bsp1286I GDGCHC 2 cut(s) 1055, 1166
Bsp1407I TGTACA 1 cut(s) 1604
Bsp143I GATC 7 cut(s) 555, 658, 741, 948, 1100, 1445, 2230
Bsp1720I GCTNAGC 1 cut(s) 1394
Bsp68I TCGCGA 1 cut(s) 177
BspACI CCGC 5 cut(s) 204, 219, 351, 354, 892
BspANI GGCC 3 cut(s) 389, 542, 1236
BspCNI CTCAG 3 cut(s) 829, 1415, 2145
BspFNI CGCG 4 cut(s) 177, 198, 206, 403
BspHI TCATGA 1 cut(s) 1198
BspLI GGNNCC 4 cut(s) 672, 1237, 1447, 1619
BspMAI CTGCAG 1 cut(s) 684
BspPI GGATC 3 cut(s) 1440, 1453, 2238
BspT104I TTCGAA 2 cut(s) 376, 2124
BsrDI GCAATG 3 cut(s) 229, 558, 602
BsrFI RCCGGY 1 cut(s) 1721
BsrGI TGTACA 1 cut(s) 1604
BsrI ACTGG 4 cut(s) 734, 1167, 1661, 1821
BssAI RCCGGY 1 cut(s) 1721
BssECI CCNNGG 1 cut(s) 495
BssMI GATC 7 cut(s) 555, 658, 741, 948, 1100, 1445, 2230
BssNI GRCGYC 1 cut(s) 2189
BssSI CACGAG 1 cut(s) 184
BssT1I CCWWGG 1 cut(s) 495
Bst2BI CACGAG 1 cut(s) 184
Bst2UI CCWGG 1 cut(s) 824
Bst4CI ACNGT 6 cut(s) 32, 212, 1460, 1918, 2021, 2072
Bst6I CTCTTC 4 cut(s) 917, 1137, 1225, 1640
BstACI GRCGYC 1 cut(s) 2189
BstAUI TGTACA 1 cut(s) 1604
BstBAI YACGTR 1 cut(s) 1900
BstBI TTCGAA 2 cut(s) 376, 2124
BstC8I GCNNGC 2 cut(s) 1028, 2105
BstDEI CTNAG 8 cut(s) 837, 1226, 1242, 1394, 1402, 1521, 2153, 2216
BstF5I GGATG 9 cut(s) 57, 337, 513, 685, 710, 900, 981, 2028, 2131
BstFNI CGCG 4 cut(s) 177, 198, 206, 403
BstH2I RGCGCY 2 cut(s) 360, 588
BstHHI GCGC 7 cut(s) 156, 200, 359, 587, 1303, 1727, 1747
BstKTI GATC 7 cut(s) 558, 661, 744, 951, 1103, 1448, 2233
BstMAI GTCTC 3 cut(s) 420, 919, 1690
BstMBI GATC 7 cut(s) 555, 658, 741, 948, 1100, 1445, 2230
BstMWI GCNNNNNNNGC 4 cut(s) 582, 1733, 1742, 2104
BstNI CCWGG 1 cut(s) 824
BstNSI RCATGY 3 cut(s) 1262, 1386, 1517
BstSCI CCNGG 1 cut(s) 822
BstSFI CTRYAG 2 cut(s) 680, 1476
BstSNI TACGTA 1 cut(s) 1900
BstUI CGCG 4 cut(s) 177, 198, 206, 403
BstV1I GCAGC 7 cut(s) 328, 406, 666, 694, 1165, 1209, 1723
BstX2I RGATCY 2 cut(s) 1100, 1445
BstYI RGATCY 2 cut(s) 1100, 1445
BsuI GTATCC 1 cut(s) 1930
BsuRI GGCC 3 cut(s) 389, 542, 1236
BtsCI GGATG 9 cut(s) 57, 337, 513, 685, 710, 900, 981, 2028, 2131
BtsI GCAGTG 1 cut(s) 571
BtsIMutI CAGTG 6 cut(s) 571, 1318, 1410, 1668, 1814, 1956
BtuMI TCGCGA 1 cut(s) 177
Cac8I GCNNGC 2 cut(s) 1028, 2105
CciI TCATGA 1 cut(s) 1198
CfoI GCGC 7 cut(s) 156, 200, 359, 587, 1303, 1727, 1747
Cfr10I RCCGGY 1 cut(s) 1721
Cfr13I GGNCC 4 cut(s) 541, 671, 1235, 1617
CseI GACGC 3 cut(s) 322, 1331, 2178
Csp6I GTAC 4 cut(s) 208, 1454, 1605, 1897
CspCI CAANNNNNGTGG 2 cut(s) 678, 713
CviAII CATG 8 cut(s) 538, 608, 1199, 1259, 1383, 1514, 2003, 2095
CviQI GTAC 4 cut(s) 208, 1454, 1605, 1897
DdeI CTNAG 8 cut(s) 837, 1226, 1242, 1394, 1402, 1521, 2153, 2216
DpnI GATC 7 cut(s) 557, 660, 743, 950, 1102, 1447, 2232
DpnII GATC 7 cut(s) 555, 658, 741, 948, 1100, 1445, 2230
Eam1104I CTCTTC 4 cut(s) 917, 1137, 1225, 1640
EarI CTCTTC 4 cut(s) 917, 1137, 1225, 1640
Ecl136II GAGCTC 2 cut(s) 1053, 1164
Eco105I TACGTA 1 cut(s) 1900
Eco130I CCWWGG 1 cut(s) 495
Eco24I GRGCYC 2 cut(s) 1055, 1166
Eco47I GGWCC 2 cut(s) 671, 1617
Eco53kI GAGCTC 2 cut(s) 1053, 1164
Eco57I CTGAAG 4 cut(s) 458, 1158, 1362, 1681
Eco88I CYCGRG 1 cut(s) 1620
EcoICRI GAGCTC 2 cut(s) 1053, 1164
EcoO109I RGGNCCY 3 cut(s) 671, 1235, 1617
EcoRI GAATTC 1 cut(s) 818
EcoRII CCWGG 1 cut(s) 822
EcoT14I CCWWGG 1 cut(s) 495
EcoT38I GRGCYC 2 cut(s) 1055, 1166
ErhI CCWWGG 1 cut(s) 495
Esp3I CGTCTC 1 cut(s) 1690
FaeI CATG 8 cut(s) 541, 611, 1202, 1262, 1386, 1517, 2006, 2098
FaqI GGGAC 2 cut(s) 684, 1603
FatI CATG 8 cut(s) 537, 607, 1198, 1258, 1382, 1513, 2002, 2094
FokI GGATG 9 cut(s) 44, 324, 520, 672, 697, 907, 968, 2015, 2118
FriOI GRGCYC 2 cut(s) 1055, 1166
FspBI CTAG 4 cut(s) 444, 588, 747, 2100
FspI TGCGCA 1 cut(s) 1302
GlaI GCGC 7 cut(s) 155, 199, 358, 586, 1302, 1726, 1746
GsuI CTGGAG 3 cut(s) 444, 1150, 2214
HaeII RGCGCY 2 cut(s) 360, 588
HaeIII GGCC 3 cut(s) 389, 542, 1236
HapII CCGG 4 cut(s) 1722, 1755, 1848, 2080
HgaI GACGC 3 cut(s) 322, 1331, 2178
HhaI GCGC 7 cut(s) 156, 200, 359, 587, 1303, 1727, 1747
Hin1I GRCGYC 1 cut(s) 2189
Hin1II CATG 8 cut(s) 541, 611, 1202, 1262, 1386, 1517, 2006, 2098
Hin6I GCGC 7 cut(s) 154, 198, 357, 585, 1301, 1725, 1745
HinP1I GCGC 7 cut(s) 154, 198, 357, 585, 1301, 1725, 1745
HincII GTYRAC 1 cut(s) 16
HindII GTYRAC 1 cut(s) 16
HindIII AAGCTT 1 cut(s) 866
HpaII CCGG 4 cut(s) 1722, 1755, 1848, 2080
HphI GGTGA 4 cut(s) 1038, 1778, 1918, 2186
Hpy166II GTNNAC 4 cut(s) 16, 394, 1456, 2213
Hpy188III TCNNGA 9 cut(s) 176, 310, 598, 914, 1199, 1414, 1544, 1620, 2193
Hpy8I GTNNAC 4 cut(s) 16, 394, 1456, 2213
Hpy99I CGWCG 2 cut(s) 182, 1645
HpyAV CCTTC 8 cut(s) 531, 542, 926, 1174, 1337, 1369, 1804, 1948
HpyCH4III ACNGT 6 cut(s) 32, 212, 1460, 1918, 2021, 2072
HpyCH4IV ACGT 3 cut(s) 432, 1899, 1992
HpyCH4V TGCA 8 cut(s) 166, 511, 563, 607, 682, 967, 1739, 1796
HpyF10VI GCNNNNNNNGC 4 cut(s) 582, 1733, 1742, 2104
HpyF3I CTNAG 8 cut(s) 837, 1226, 1242, 1394, 1402, 1521, 2153, 2216
HpySE526I ACGT 3 cut(s) 432, 1899, 1992
Hsp92I GRCGYC 1 cut(s) 2189
Hsp92II CATG 8 cut(s) 541, 611, 1202, 1262, 1386, 1517, 2006, 2098
HspAI GCGC 7 cut(s) 154, 198, 357, 585, 1301, 1725, 1745
Kzo9I GATC 7 cut(s) 555, 658, 741, 948, 1100, 1445, 2230
LmnI GCTCC 4 cut(s) 1161, 1169, 1346, 1525
Lsp1109I GCAGC 7 cut(s) 328, 406, 666, 694, 1165, 1209, 1723
LweI GCATC 8 cut(s) 105, 498, 694, 907, 976, 990, 1288, 1407
MaeI CTAG 4 cut(s) 444, 588, 747, 2100
MaeII ACGT 3 cut(s) 432, 1899, 1992
MaeIII GTNAC 7 cut(s) 189, 598, 850, 1531, 1663, 1886, 1988
MalI GATC 7 cut(s) 557, 660, 743, 950, 1102, 1447, 2232
MboI GATC 7 cut(s) 555, 658, 741, 948, 1100, 1445, 2230
MflI RGATCY 2 cut(s) 1100, 1445
MhlI GDGCHC 2 cut(s) 1055, 1166
MluI ACGCGT 1 cut(s) 401
MlyI GAGTC 3 cut(s) 247, 1660, 1760
MmeI TCCRAC 1 cut(s) 1483
MroXI GAANNNNTTC 2 cut(s) 372, 1358
MseI TTAA 9 cut(s) 413, 738, 807, 1041, 1095, 1149, 1467, 1821, 1830
MslI CAYNNNNRTG 1 cut(s) 1403
MspA1I CMGCKG 1 cut(s) 1481
MspI CCGG 4 cut(s) 1722, 1755, 1848, 2080
MspR9I CCNGG 1 cut(s) 824
MvaI CCWGG 1 cut(s) 824
MvnI CGCG 4 cut(s) 177, 198, 206, 403
MwoI GCNNNNNNNGC 4 cut(s) 582, 1733, 1742, 2104
NdeII GATC 7 cut(s) 555, 658, 741, 948, 1100, 1445, 2230
NlaIII CATG 8 cut(s) 541, 611, 1202, 1262, 1386, 1517, 2006, 2098
NlaIV GGNNCC 4 cut(s) 672, 1237, 1447, 1619
NmuCI GTSAC 3 cut(s) 189, 598, 1663
NruI TCGCGA 1 cut(s) 177
NsbI TGCGCA 1 cut(s) 1302
NspI RCATGY 3 cut(s) 1262, 1386, 1517
NspV TTCGAA 2 cut(s) 376, 2124
PagI TCATGA 1 cut(s) 1198
PciI ACATGT 3 cut(s) 1258, 1382, 1513
PcsI WCGNNNNNNNCGW 1 cut(s) 798
PdmI GAANNNNTTC 2 cut(s) 372, 1358
PfeI GAWTC 7 cut(s) 172, 322, 594, 1211, 1292, 2047, 2089
Pfl23II CGTACG 1 cut(s) 207
PflMI CCANNNNNTGG 3 cut(s) 347, 538, 1502
PfoI TCCNGGA 1 cut(s) 822
PleI GAGTC 3 cut(s) 247, 1660, 1759
PpsI GAGTC 3 cut(s) 247, 1660, 1759
Ppu21I YACGTR 1 cut(s) 1900
PpuMI RGGWCCY 2 cut(s) 671, 1617
PscI ACATGT 3 cut(s) 1258, 1382, 1513
PshBI ATTAAT 1 cut(s) 413
Psp124BI GAGCTC 2 cut(s) 1055, 1166
Psp5II RGGWCCY 2 cut(s) 671, 1617
Psp6I CCWGG 1 cut(s) 822
PspGI CCWGG 1 cut(s) 822
PspLI CGTACG 1 cut(s) 207
PspN4I GGNNCC 4 cut(s) 672, 1237, 1447, 1619
PspPI GGNCC 4 cut(s) 541, 671, 1235, 1617
PspPPI RGGWCCY 2 cut(s) 671, 1617
PstI CTGCAG 1 cut(s) 684
PsuI RGATCY 2 cut(s) 1100, 1445
PvuII CAGCTG 1 cut(s) 1481
RruI TCGCGA 1 cut(s) 177
RsaI GTAC 4 cut(s) 209, 1455, 1606, 1898
RsaNI GTAC 4 cut(s) 208, 1454, 1605, 1897
RseI CAYNNNNRTG 1 cut(s) 1403
SacI GAGCTC 2 cut(s) 1055, 1166
SaqAI TTAA 9 cut(s) 413, 738, 807, 1041, 1095, 1149, 1467, 1821, 1830
Sau3AI GATC 7 cut(s) 555, 658, 741, 948, 1100, 1445, 2230
Sau96I GGNCC 4 cut(s) 541, 671, 1235, 1617
SchI GAGTC 3 cut(s) 247, 1660, 1760
ScrFI CCNGG 1 cut(s) 824
SduI GDGCHC 2 cut(s) 1055, 1166
SfaNI GCATC 8 cut(s) 105, 498, 694, 907, 976, 990, 1288, 1407
SfcI CTRYAG 2 cut(s) 680, 1476
SfuI TTCGAA 2 cut(s) 376, 2124
SinI GGWCC 2 cut(s) 671, 1617
SmiMI CAYNNNNRTG 1 cut(s) 1403
SnaBI TACGTA 1 cut(s) 1900
SpeI ACTAGT 1 cut(s) 746
SsiI CCGC 5 cut(s) 204, 219, 351, 354, 892
SspI AATATT 3 cut(s) 91, 942, 2121
SspMI CTAG 4 cut(s) 444, 588, 747, 2100
SstI GAGCTC 2 cut(s) 1055, 1166
StyD4I CCNGG 1 cut(s) 822
StyI CCWWGG 1 cut(s) 495
TaaI ACNGT 6 cut(s) 32, 212, 1460, 1918, 2021, 2072
TaiI ACGT 3 cut(s) 435, 1902, 1995
TaqI TCGA 5 cut(s) 376, 440, 813, 1872, 2124
TaqII GACCGA 1 cut(s) 33
TatI WGTACW 2 cut(s) 1453, 1604
TauI GCSGC 3 cut(s) 222, 354, 357
TfiI GAWTC 7 cut(s) 172, 322, 594, 1211, 1292, 2047, 2089
Tru1I TTAA 9 cut(s) 413, 738, 807, 1041, 1095, 1149, 1467, 1821, 1830
Tru9I TTAA 9 cut(s) 413, 738, 807, 1041, 1095, 1149, 1467, 1821, 1830
TscAI CASTG 6 cut(s) 578, 1318, 1410, 1668, 1821, 1956
TseFI GTSAC 3 cut(s) 189, 598, 1663
TseI GCWGC 7 cut(s) 316, 419, 679, 682, 1153, 1222, 1736
Tsp45I GTSAC 3 cut(s) 189, 598, 1663
TspDTI ATGAA 9 cut(s) 63, 110, 568, 831, 898, 1119, 1215, 1351, 1706
TspGWI ACGGA 5 cut(s) 246, 703, 866, 1113, 1672
TspRI CASTG 6 cut(s) 578, 1318, 1410, 1668, 1821, 1956
Van91I CCANNNNNTGG 3 cut(s) 347, 538, 1502
VpaK11BI GGWCC 2 cut(s) 671, 1617
VspI ATTAAT 1 cut(s) 413
XapI RAATTY 1 cut(s) 818
XceI RCATGY 3 cut(s) 1262, 1386, 1517
XmnI GAANNNNTTC 2 cut(s) 372, 1358
XspI CTAG 4 cut(s) 444, 588, 747, 2100
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.