Rmu_sc0005558.1_g000006

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005558.1
OG0000582
Physical Location & Seq
Reverse (-)
49858 .. 53745
3888 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005558.1_g000006.1.cds

Sequence Viewer

Length: 1764 bp
atgtacggacgtcctcctcgctcctccggcggcgcatggggtcagccaccgccgcttgcacagcctctgaactctaatttctcactccaaaaccccaacactccatacatctaccctataaaccctgcctttacgccccaccatgcctaccgaaacttctcccccaacaatctcccaccgcagaaccctagcttcgttccccagcagttctcgaattcgccgtttcggcctcctccgcctcagggtaactccaaagagctgctggagaaagtcgaccgcgccgtggcgaaggctcggtcggaccttgttgccgccggcgacagcgtctcggcgtggaaggtctcgcagtcggcgcttctgatgctccagattgatggctggagctctctggggtttcagatgcagcaggtgccgtctctacaccgcctcatgttcactgaaggcaagataaatgcatttattcagtgttttgttgcggttcgaagaatttcttcattatacgatctggaagtagcagtctgcaagaatgagggcatcgagaagtttgaagagctagggttgggccctttggtgcgacacccacttgttttgcattattactcagtgaagcctgatactaatgaagtttataagattactagcgatgagataatatctttactctctgagtacatggatacctgcaagaataaagaaattaagattgaagaatttttagatttcattgtaaagaagcgatctgttgcaagcaaggaagatcttggaatacgaattcagagcatggggatgcatatttctgctatccgggatgtgaagaaaactgaacaggttcttaagcaaacatctaagaaaggtaacaataagcgttacttctcattgaaaaggcagctagacgaacgtttcaacgacatttctcagcgtgttgaatcattttcctccgtacagaagttttgtggcaagcacattaggtttgattcttcaaaagactcggaggctgacagtagtgatgataattcatatgaagatgatgatgaagttaatgaccattcgacaggcaatcaggttaacttattatcaaaatctgttacaacttctgatcgagctagcagatgtccttacccttctgaattagaagagaagaaacggctaggattgaaccagcattccccagctagttgctcccaaaagcttggtgagagtaatcagtcagctaaaaagaaaagaaactctgaagatgtaaacagtccaatctcagtgcccaccaaattgcgtaagagagataagacgggagaagatgctcctcgaacagggcatggctggaaaaccaatgaggttaacaatttggatgaaaatgatctcgcaattactgatagctgtttaaagaccttcattacaacttggaaggaggcatgtcggcagaaaactgtggctgaggtacttgatagattactgcagcttaataacatagaagctcagaagaaaaaggaaatcaagtcaatgttttctttggatccattaattggattgttaaatgttgctgtctcatctatcaaatccggattgtgggatagcatgtatgatacattccaaactgttggtcagttaactgacagtcttccagataactgtcctgaatatgtgaacatagatgttgaaccaagtattaaagatgtgaaaagtaccaaggatgcaccagtcattcctgaacacgctgtagaccacaggcagagtgagttgtgttggcttttcatttcttttgactag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

587

Amino Acids

66.15

Weight (kDa)

6.66

Isoelectric Point (pI)

55.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 630
AarI CACCTGC 1 cut(s) 397
AatII GACGTC 1 cut(s) 13
Acc36I ACCTGC 2 cut(s) 397, 689
AccB1I GGYRCC 1 cut(s) 409
AccB7I CCANNNNNTGG 1 cut(s) 1520
AccI GTMKAC 2 cut(s) 273, 1716
AccII CGCG 1 cut(s) 279
AccIII TCCGGA 1 cut(s) 1556
AciI CCGC 9 cut(s) 30, 50, 53, 179, 236, 277, 312, 424, 476
AclI AACGTT 1 cut(s) 898
AclWI GGATC 2 cut(s) 1505, 1518
AcsI RAATTY 4 cut(s) 214, 486, 710, 771
AcuI CTGAAG 2 cut(s) 459, 1251
AcyI GRCGYC 1 cut(s) 10
AfaI GTAC 5 cut(s) 5, 671, 942, 1437, 1681
AfiI CCNNNNNNNGG 5 cut(s) 242, 283, 1307, 1520, 1563
AflII CTTAAG 1 cut(s) 833
AgsI TTSAA 8 cut(s) 548, 707, 880, 904, 926, 981, 1156, 1655
AloI GAACNNNNNNTCC 2 cut(s) 1148, 1180
Alw21I GWGCWC 1 cut(s) 386
Alw26I GTCTC 4 cut(s) 331, 346, 420, 1546
AlwI GGATC 2 cut(s) 1505, 1518
AlwNI CAGNNNCTG 1 cut(s) 67
Aor13HI TCCGGA 1 cut(s) 1556
AoxI GGCC 2 cut(s) 227, 562
ApaI GGGCCC 1 cut(s) 566
ApeKI GCWGC 4 cut(s) 259, 403, 886, 1453
ApoI RAATTY 4 cut(s) 214, 486, 710, 771
ArsI GACNNNNNNTTYG 4 cut(s) 281, 313, 1582, 1614
AseI ATTAAT 1 cut(s) 1517
Asp700I GAANNNNTTC 3 cut(s) 487, 490, 828
AspLEI GCGC 3 cut(s) 35, 281, 355
AspS9I GGNCC 3 cut(s) 301, 562, 563
AsuC2I CCSGG 1 cut(s) 806
AsuHPI GGTGA 1 cut(s) 1205
AsuII TTCGAA 1 cut(s) 481
AsuNHI GCTAGC 1 cut(s) 1103
AvaII GGWCC 1 cut(s) 301
AxyI CCTNAGG 1 cut(s) 240
BaeGI GKGCMC 2 cut(s) 566, 1260
BamHI GGATCC 1 cut(s) 1510
BanI GGYRCC 1 cut(s) 409
BanII GRGCYC 2 cut(s) 386, 566
BbsI GAAGAC 1 cut(s) 1607
Bbv12I GWGCWC 1 cut(s) 386
BbvCI CCTCAGC 1 cut(s) 1431
BbvI GCAGC 4 cut(s) 246, 415, 898, 1465
BccI CCATC 1 cut(s) 368
BceAI ACGGC 4 cut(s) 205, 266, 397, 1160
BciVI GTATCC 1 cut(s) 670
BcnI CCSGG 1 cut(s) 806
BcoDI GTCTC 4 cut(s) 331, 346, 420, 1546
BfaI CTAG 8 cut(s) 189, 554, 639, 890, 1104, 1148, 1173, 1762
BfmI CTRYAG 2 cut(s) 1451, 1713
BfoI RGCGCY 1 cut(s) 356
BfrI CTTAAG 1 cut(s) 833
BfuAI ACCTGC 2 cut(s) 397, 689
BfuI GTATCC 1 cut(s) 670
BglI GCCNNNNNGGC 1 cut(s) 226
BglII AGATCT 1 cut(s) 757
BisI GCNGC 7 cut(s) 31, 53, 260, 312, 404, 887, 1454
BlsI GCNGC 7 cut(s) 32, 54, 261, 313, 405, 888, 1455
Bme1390I CCNGG 1 cut(s) 806
Bme18I GGWCC 1 cut(s) 301
BmgT120I GGNCC 3 cut(s) 301, 562, 563
BmiI GGNNCC 3 cut(s) 411, 564, 1512
BmrFI CCNGG 1 cut(s) 806
BmsI GCATC 6 cut(s) 351, 390, 543, 777, 1285, 1678
BmtI GCTAGC 1 cut(s) 1107
BpiI GAAGAC 1 cut(s) 1607
BpmI CTGGAG 3 cut(s) 284, 350, 400
Bpu10I CCTNAGC 1 cut(s) 1431
Bpu14I TTCGAA 1 cut(s) 481
BpuMI CCSGG 1 cut(s) 806
BsaHI GRCGYC 1 cut(s) 10
BsaI GGTCTC 1 cut(s) 346
BsaJI CCNNGG 2 cut(s) 282, 1683
BsaWI WCCGGW 1 cut(s) 1556
Bsc4I CCNNNNNNNGG 5 cut(s) 242, 283, 1307, 1520, 1563
Bse118I RCCGGY 1 cut(s) 314
Bse1I ACTGG 1 cut(s) 1694
Bse21I CCTNAGG 1 cut(s) 240
BseAI TCCGGA 1 cut(s) 1556
BseDI CCNNGG 2 cut(s) 282, 1683
BseGI GGATG 4 cut(s) 792, 814, 1351, 1693
BseLI CCNNNNNNNGG 5 cut(s) 242, 283, 1307, 1520, 1563
BseMII CTCAG 7 cut(s) 254, 615, 657, 929, 1266, 1422, 1487
BseNI ACTGG 1 cut(s) 1694
BseRI GAGGAG 4 cut(s) 6, 13, 222, 1290
BseSI GKGCMC 2 cut(s) 566, 1260
BseXI GCAGC 4 cut(s) 246, 415, 898, 1465
BseYI CCCAGC 2 cut(s) 201, 1168
Bsh1236I CGCG 1 cut(s) 279
Bsh1285I CGRYCG 2 cut(s) 277, 299
BshFI GGCC 2 cut(s) 229, 564
BshNI GGYRCC 1 cut(s) 409
BsiEI CGRYCG 2 cut(s) 277, 299
BsiHKAI GWGCWC 1 cut(s) 386
BsiSI CCGG 4 cut(s) 27, 315, 805, 1557
BslI CCNNNNNNNGG 5 cut(s) 242, 283, 1307, 1520, 1563
BsmAI GTCTC 4 cut(s) 331, 346, 420, 1546
BsmBI CGTCTC 2 cut(s) 331, 420
BsmI GAATGC 1 cut(s) 1162
BsnI GGCC 2 cut(s) 229, 564
Bso31I GGTCTC 1 cut(s) 346
Bsp119I TTCGAA 1 cut(s) 481
Bsp120I GGGCCC 1 cut(s) 562
Bsp1286I GDGCHC 3 cut(s) 386, 566, 1260
Bsp13I TCCGGA 1 cut(s) 1556
Bsp143I GATC 6 cut(s) 502, 737, 757, 1096, 1354, 1510
BspACI CCGC 9 cut(s) 30, 50, 53, 179, 236, 277, 312, 424, 476
BspANI GGCC 2 cut(s) 229, 564
BspCNI CTCAG 7 cut(s) 253, 614, 658, 928, 1265, 1423, 1486
BspEI TCCGGA 1 cut(s) 1556
BspFNI CGCG 1 cut(s) 279
BspLI GGNNCC 3 cut(s) 411, 564, 1512
BspMAI CTGCAG 1 cut(s) 1455
BspMI ACCTGC 2 cut(s) 397, 689
BspOI GCTAGC 1 cut(s) 1107
BspPI GGATC 2 cut(s) 1505, 1518
BspQI GCTCTTC 1 cut(s) 543
BspT104I TTCGAA 1 cut(s) 481
BspT107I GGYRCC 1 cut(s) 409
BspTI CTTAAG 1 cut(s) 833
BspTNI GGTCTC 1 cut(s) 346
BsrFI RCCGGY 1 cut(s) 314
BsrI ACTGG 1 cut(s) 1694
BssAI RCCGGY 1 cut(s) 314
BssECI CCNNGG 2 cut(s) 282, 1683
BssMI GATC 6 cut(s) 502, 737, 757, 1096, 1354, 1510
BssNI GRCGYC 1 cut(s) 10
BssT1I CCWWGG 1 cut(s) 1683
Bst4CI ACNGT 6 cut(s) 1001, 1244, 1426, 1594, 1613, 1628
Bst6I CTCTTC 2 cut(s) 543, 1128
BstACI GRCGYC 1 cut(s) 10
BstAFI CTTAAG 1 cut(s) 833
BstAPI GCANNNNNTGC 1 cut(s) 409
BstBI TTCGAA 1 cut(s) 481
BstC8I GCNNGC 5 cut(s) 57, 316, 748, 959, 1105
BstDEI CTNAG 8 cut(s) 240, 601, 666, 846, 915, 1252, 1431, 1473
BstDSI CCRYGG 1 cut(s) 282
BstENI CCTNNNNNAGG 1 cut(s) 1305
BstF5I GGATG 4 cut(s) 792, 814, 1351, 1693
BstFNI CGCG 1 cut(s) 279
BstH2I RGCGCY 1 cut(s) 356
BstHHI GCGC 3 cut(s) 35, 281, 355
BstKTI GATC 6 cut(s) 505, 740, 760, 1099, 1357, 1513
BstMAI GTCTC 4 cut(s) 331, 346, 420, 1546
BstMBI GATC 6 cut(s) 502, 737, 757, 1096, 1354, 1510
BstMCI CGRYCG 2 cut(s) 277, 299
BstMWI GCNNNNNNNGC 8 cut(s) 27, 52, 61, 226, 235, 352, 361, 409
BstNSI RCATGY 2 cut(s) 1413, 1576
BstSCI CCNGG 1 cut(s) 804
BstSFI CTRYAG 2 cut(s) 1451, 1713
BstSLI GKGCMC 2 cut(s) 566, 1260
BstUI CGCG 1 cut(s) 279
BstV1I GCAGC 4 cut(s) 246, 415, 898, 1465
BstV2I GAAGAC 1 cut(s) 1607
BstX2I RGATCY 2 cut(s) 757, 1510
BstXI CCANNNNNNTGG 3 cut(s) 374, 1190, 1595
BstYI RGATCY 2 cut(s) 757, 1510
Bsu36I CCTNAGG 1 cut(s) 240
BsuI GTATCC 1 cut(s) 670
BsuRI GGCC 2 cut(s) 229, 564
BtgI CCRYGG 1 cut(s) 282
BtgZI GCGATG 1 cut(s) 657
BtsCI GGATG 4 cut(s) 792, 814, 1351, 1693
BtsIMutI CAGTG 4 cut(s) 435, 470, 609, 1260
BveI ACCTGC 2 cut(s) 397, 689
Cac8I GCNNGC 5 cut(s) 57, 316, 748, 959, 1105
CaiI CAGNNNCTG 1 cut(s) 67
CfoI GCGC 3 cut(s) 35, 281, 355
Cfr10I RCCGGY 1 cut(s) 314
Cfr13I GGNCC 3 cut(s) 301, 562, 563
CseI GACGC 1 cut(s) 313
Csp6I GTAC 5 cut(s) 4, 670, 941, 1436, 1680
CspCI CAANNNNNGTGG 2 cut(s) 570, 605
CviAII CATG 8 cut(s) 36, 143, 430, 673, 781, 1313, 1410, 1573
CviQI GTAC 5 cut(s) 4, 670, 941, 1436, 1680
DdeI CTNAG 8 cut(s) 240, 601, 666, 846, 915, 1252, 1431, 1473
DpnI GATC 6 cut(s) 504, 739, 759, 1098, 1356, 1512
DpnII GATC 6 cut(s) 502, 737, 757, 1096, 1354, 1510
DraI TTTAAA 1 cut(s) 1380
Eam1104I CTCTTC 2 cut(s) 543, 1128
EarI CTCTTC 2 cut(s) 543, 1128
EciI GGCGGA 1 cut(s) 225
Ecl136II GAGCTC 1 cut(s) 384
Eco130I CCWWGG 1 cut(s) 1683
Eco24I GRGCYC 2 cut(s) 386, 566
Eco31I GGTCTC 1 cut(s) 346
Eco47I GGWCC 1 cut(s) 301
Eco53kI GAGCTC 1 cut(s) 384
Eco57I CTGAAG 2 cut(s) 459, 1251
Eco81I CCTNAGG 1 cut(s) 240
EcoICRI GAGCTC 1 cut(s) 384
EcoNI CCTNNNNNAGG 1 cut(s) 1305
EcoO109I RGGNCCY 1 cut(s) 563
EcoRI GAATTC 2 cut(s) 214, 771
EcoT14I CCWWGG 1 cut(s) 1683
EcoT22I ATGCAT 2 cut(s) 457, 792
EcoT38I GRGCYC 2 cut(s) 386, 566
ErhI CCWWGG 1 cut(s) 1683
Esp3I CGTCTC 2 cut(s) 331, 420
FaeI CATG 8 cut(s) 39, 146, 433, 676, 784, 1316, 1413, 1576
FalI AAGNNNNNCTT 4 cut(s) 475, 507, 854, 886
FatI CATG 8 cut(s) 35, 142, 429, 672, 780, 1312, 1409, 1572
FauNDI CATATG 1 cut(s) 1018
FblI GTMKAC 2 cut(s) 273, 1716
Fnu4HI GCNGC 7 cut(s) 31, 53, 260, 312, 404, 887, 1454
FokI GGATG 4 cut(s) 799, 821, 1358, 1700
FriOI GRGCYC 2 cut(s) 386, 566
Fsp4HI GCNGC 7 cut(s) 31, 53, 260, 312, 404, 887, 1454
FspBI CTAG 8 cut(s) 189, 554, 639, 890, 1104, 1148, 1173, 1762
GlaI GCGC 3 cut(s) 34, 280, 354
GluI GCNGC 7 cut(s) 31, 53, 260, 312, 404, 887, 1454
GsaI CCCAGC 2 cut(s) 205, 1172
GsuI CTGGAG 3 cut(s) 284, 350, 400
HaeII RGCGCY 1 cut(s) 356
HaeIII GGCC 2 cut(s) 229, 564
HapII CCGG 4 cut(s) 27, 315, 805, 1557
HgaI GACGC 1 cut(s) 313
HhaI GCGC 3 cut(s) 35, 281, 355
Hin1I GRCGYC 1 cut(s) 10
Hin1II CATG 8 cut(s) 39, 146, 433, 676, 784, 1316, 1413, 1576
Hin6I GCGC 3 cut(s) 33, 279, 353
HinP1I GCGC 3 cut(s) 33, 279, 353
HincII GTYRAC 4 cut(s) 274, 1066, 1336, 1605
HindII GTYRAC 4 cut(s) 274, 1066, 1336, 1605
HindIII AAGCTT 1 cut(s) 1187
HinfI GANTC 3 cut(s) 926, 974, 986
HpaI GTTAAC 3 cut(s) 1066, 1336, 1605
HpaII CCGG 4 cut(s) 27, 315, 805, 1557
HphI GGTGA 1 cut(s) 1205
Hpy166II GTNNAC 8 cut(s) 274, 435, 1066, 1240, 1336, 1605, 1642, 1717
Hpy188III TCNNGA 8 cut(s) 211, 367, 506, 538, 1557, 1619, 1631, 1703
Hpy8I GTNNAC 8 cut(s) 274, 435, 1066, 1240, 1336, 1605, 1642, 1717
HpyAV CCTTC 6 cut(s) 283, 331, 434, 1131, 1396, 1396
HpyCH4III ACNGT 6 cut(s) 1001, 1244, 1426, 1594, 1613, 1628
HpyCH4IV ACGT 2 cut(s) 10, 898
HpyF10VI GCNNNNNNNGC 8 cut(s) 27, 52, 61, 226, 235, 352, 361, 409
HpyF3I CTNAG 8 cut(s) 240, 601, 666, 846, 915, 1252, 1431, 1473
HpySE526I ACGT 2 cut(s) 10, 898
Hsp92I GRCGYC 1 cut(s) 10
Hsp92II CATG 8 cut(s) 39, 146, 433, 676, 784, 1316, 1413, 1576
HspAI GCGC 3 cut(s) 33, 279, 353
Kpn2I TCCGGA 1 cut(s) 1556
KroI GCCGGC 1 cut(s) 314
KroNI GCCGGC 1 cut(s) 316
KspAI GTTAAC 3 cut(s) 1066, 1336, 1605
Kzo9I GATC 6 cut(s) 502, 737, 757, 1096, 1354, 1510
LguI GCTCTTC 1 cut(s) 543
LmnI GCTCC 5 cut(s) 26, 369, 381, 1184, 1303
Lsp1109I GCAGC 4 cut(s) 246, 415, 898, 1465
LweI GCATC 6 cut(s) 351, 390, 543, 777, 1285, 1678
MaeI CTAG 8 cut(s) 189, 554, 639, 890, 1104, 1148, 1173, 1762
MaeII ACGT 2 cut(s) 10, 898
MaeIII GTNAC 4 cut(s) 245, 854, 866, 1084
MalI GATC 6 cut(s) 504, 739, 759, 1098, 1356, 1512
MboI GATC 6 cut(s) 502, 737, 757, 1096, 1354, 1510
MflI RGATCY 2 cut(s) 757, 1510
MhlI GDGCHC 3 cut(s) 386, 566, 1260
MlyI GAGTC 1 cut(s) 980
MmeI TCCRAC 1 cut(s) 279
Mph1103I ATGCAT 2 cut(s) 457, 792
MreI CGCCGGCG 1 cut(s) 314
MroI TCCGGA 1 cut(s) 1556
MroNI GCCGGC 1 cut(s) 314
MroXI GAANNNNTTC 3 cut(s) 487, 490, 828
MslI CAYNNNNRTG 1 cut(s) 785
MspCI CTTAAG 1 cut(s) 833
MspI CCGG 4 cut(s) 27, 315, 805, 1557
MspR9I CCNGG 1 cut(s) 806
Mva1269I GAATGC 1 cut(s) 1162
MvnI CGCG 1 cut(s) 279
MwoI GCNNNNNNNGC 8 cut(s) 27, 52, 61, 226, 235, 352, 361, 409
NaeI GCCGGC 1 cut(s) 316
NciI CCSGG 1 cut(s) 806
NdeI CATATG 1 cut(s) 1018
NdeII GATC 6 cut(s) 502, 737, 757, 1096, 1354, 1510
NgoMIV GCCGGC 1 cut(s) 314
NheI GCTAGC 1 cut(s) 1103
NlaIII CATG 8 cut(s) 39, 146, 433, 676, 784, 1316, 1413, 1576
NlaIV GGNNCC 3 cut(s) 411, 564, 1512
NmeAIII GCCGAG 1 cut(s) 308
NsiI ATGCAT 2 cut(s) 457, 792
NspI RCATGY 2 cut(s) 1413, 1576
NspV TTCGAA 1 cut(s) 481
PaqCI CACCTGC 1 cut(s) 397
PciSI GCTCTTC 1 cut(s) 543
PcsI WCGNNNNNNNCGW 2 cut(s) 218, 279
PctI GAATGC 1 cut(s) 1162
PdiI GCCGGC 1 cut(s) 316
PdmI GAANNNNTTC 3 cut(s) 487, 490, 828
PfeI GAWTC 2 cut(s) 926, 974
PflFI GACNNNGTC 1 cut(s) 323
PflMI CCANNNNNTGG 1 cut(s) 1520
PfoI TCCNGGA 1 cut(s) 804
PkrI GCNGC 7 cut(s) 32, 54, 261, 313, 405, 888, 1455
PleI GAGTC 1 cut(s) 980
PpsI GAGTC 1 cut(s) 980
PshBI ATTAAT 1 cut(s) 1517
PsiI TTATAA 1 cut(s) 630
Psp124BI GAGCTC 1 cut(s) 386
Psp1406I AACGTT 1 cut(s) 898
PspFI CCCAGC 2 cut(s) 201, 1168
PspN4I GGNNCC 3 cut(s) 411, 564, 1512
PspOMI GGGCCC 1 cut(s) 562
PspPI GGNCC 3 cut(s) 301, 562, 563
PstI CTGCAG 1 cut(s) 1455
PstNI CAGNNNCTG 1 cut(s) 67
PsuI RGATCY 2 cut(s) 757, 1510
PsyI GACNNNGTC 1 cut(s) 323
RsaI GTAC 5 cut(s) 5, 671, 942, 1437, 1681
RsaNI GTAC 5 cut(s) 4, 670, 941, 1436, 1680
RseI CAYNNNNRTG 1 cut(s) 785
SacI GAGCTC 1 cut(s) 386
SalI GTCGAC 1 cut(s) 272
SapI GCTCTTC 1 cut(s) 543
SatI GCNGC 7 cut(s) 31, 53, 260, 312, 404, 887, 1454
Sau3AI GATC 6 cut(s) 502, 737, 757, 1096, 1354, 1510
Sau96I GGNCC 3 cut(s) 301, 562, 563
SchI GAGTC 1 cut(s) 980
ScrFI CCNGG 1 cut(s) 806
SduI GDGCHC 3 cut(s) 386, 566, 1260
SfaNI GCATC 6 cut(s) 351, 390, 543, 777, 1285, 1678
SfcI CTRYAG 2 cut(s) 1451, 1713
SfuI TTCGAA 1 cut(s) 481
SgrAI CRCCGGYG 1 cut(s) 314
SinI GGWCC 1 cut(s) 301
SmiMI CAYNNNNRTG 1 cut(s) 785
SmlI CTYRAG 1 cut(s) 833
SmoI CTYRAG 1 cut(s) 833
SsiI CCGC 9 cut(s) 30, 50, 53, 179, 236, 277, 312, 424, 476
SspMI CTAG 8 cut(s) 189, 554, 639, 890, 1104, 1148, 1173, 1762
SstI GAGCTC 1 cut(s) 386
StyD4I CCNGG 1 cut(s) 804
StyI CCWWGG 1 cut(s) 1683
TaaI ACNGT 6 cut(s) 1001, 1244, 1426, 1594, 1613, 1628
TaiI ACGT 2 cut(s) 13, 901
TaqI TCGA 7 cut(s) 212, 273, 481, 537, 1049, 1099, 1303
TaqII GACCGA 1 cut(s) 285
TatI WGTACW 1 cut(s) 669
TauI GCSGC 3 cut(s) 33, 55, 314
TfiI GAWTC 2 cut(s) 926, 974
TscAI CASTG 4 cut(s) 442, 470, 609, 1260
TseI GCWGC 4 cut(s) 259, 403, 886, 1453
TspDTI ATGAA 9 cut(s) 483, 636, 712, 1005, 1035, 1047, 1362, 1378, 1738
TspGWI ACGGA 2 cut(s) 21, 928
TspRI CASTG 4 cut(s) 442, 470, 609, 1260
Tth111I GACNNNGTC 1 cut(s) 323
Van91I CCANNNNNTGG 1 cut(s) 1520
Vha464I CTTAAG 1 cut(s) 833
VpaK11BI GGWCC 1 cut(s) 301
VspI ATTAAT 1 cut(s) 1517
XagI CCTNNNNNAGG 1 cut(s) 1305
XapI RAATTY 4 cut(s) 214, 486, 710, 771
XceI RCATGY 2 cut(s) 1413, 1576
XcmI CCANNNNNNNNNTGG 1 cut(s) 259
XmiI GTMKAC 2 cut(s) 273, 1716
XmnI GAANNNNTTC 3 cut(s) 487, 490, 828
XspI CTAG 8 cut(s) 189, 554, 639, 890, 1104, 1148, 1173, 1762
ZraI GACGTC 1 cut(s) 11
Zsp2I ATGCAT 2 cut(s) 457, 792
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.