FvH4_4g13620

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000582
Physical Location & Seq
Forward (+)
17173063 .. 17177609
4547 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g13620.t1

Sequence Viewer

Length: 2796 bp
ATGACCAGATACTTGTACAGTGAAGCATCCAATGACTACTCGGTTTCTCCCTCCGGCGCAATGAACGCACCTCCTTTCCTCTTCTCCGGCGACCCATGGGGCCAACCACCGCCTCCTCCGCCGCAGCCGCTCCCCCTAAACCCCAATTTCCTTATACAAAGCTCCCTCAATCTATACACCTACCTCTCAAGCCTCGCCTCCTTTACACCCCACTACCGCCCAGCCCCCCCTCCTAATTATTTCCCAATCCAAAACCCTAGCTTCGCCCCCAACCGCTTCTCCATCTCAGAATATCATCCTCCGCTTCTGCCGCCGCTTCCGCCTCAGTCTCCGCCTCCGCACCCGCCTTCCTCTCCGCCTCCGTCTCCCCCTCCGCCTCCGCCTTCGCCCCAGAACCCGAAGCAGCGGCTGGAGAGAATCGACCGCGCCGTGGAGACGGCTCGCTCTGATCTAATTGCCGCCGGGGAAGGCGTCTCGGCGTGGAAGGTCACGCAGTCTGCGATTCGGATACTGGAGATAAATGCATTTATCCATTGTTTTGTTGGGGTTCGAAGAATTGCTTCATTGTATGATCTGGAAGTAGCAATCTGCAAGAATGAGGGCATTGAACAGTTTGAAGAGCTGGGATTGGGCCCTTTGTTGCAAAATCCTCTTGTCGGGCATTATTTCTCAGTGAAGTGTGATGCAACTGAAGTGTTTAAGATAACGAGTGAGGATATAATATCCTTACTATCCGAGTTCATGGATATTTGTAAACATACATATATAAGGGTTGAAGAATTTCTAGATTTCGTTGTAAAGAAGTGCACAGTTGCAAGCAGGGAAGACCTTAGAATTCGAATTCACAGCTTAGGGGTGCATATTTCAGCCATCCGGATAGCTAGGGATTTAGAATCTGCTGCTCTGAAGAAATCTGGAGAGTTAATTATTCAAAAAGCAGATTCAAGATGTACGAAGGGGCCACCCAGAATGCAGCAAAACAAAGATTTCACGACCTCCGTACATAAACAGTTTTGTGGCAAGCACACTAGGTTTGATTCAGACGATGATGGTAGTGATGCTGAAAATAAAGACCATGTCAGAGGCAATCAGGTTAACGTATCATCACAAGCTGCTTTAATATCTGACAGAGTGGACAGTGAGGATGGTTTGGTAGTCTCTCCATCACAATCCAAGGGTCAGCTCAGCCAGGTTAACTTATCGTCACAAACGGCTGGAAGTTCTGACAGAGTGAATAGTGATGATGGTTTGGTTGTCTCTCCATCGCAGTCCAAGGGTCAATTTCCCTTGTTGAAAATGCAGCAAGACAAAGGTTCCAGTACCATTTCTTGTCGTGTTGAATCTTATTTCTCCGTACGTAATCAGTTTTGTGGCAAGCACATTAGGTTTGATTCTCCAGAAAACTCAGAGAATGAAGGTGGTGATGATGATTTACATGATGAAGAAGATTGTAATAGTGACCAGGTAACATGCAGTTTGGTTAACTTCTTGTCACAATCTGGTGGAAGGTCTGACCGTGTGAGCAGCTGTCCTTACCCATCTGCCATGGAAGAGATACAACGGCTTGGGTTGGACCAGCTTTCTTCAGATAGTGGCAGCCAGAAGCACAAAGAGACTATTGGCTCAATTAAAAAGAAAAGAAAATCTGAAGATCTTGCAATTACAATCTATGTGCCTCCCAAATTGCGTAAGACAGAAAACTCAGAGAATGAAGGCGGTGATGATGATTTATATGATGAAGAAGATTGTGACTGTGACCAGGTCACATGCAGTTTGGTTAACTTGTCGTCACAATCTGGTGGAAGGTCTGACCGTGTGAGCAGCTGTCCTTACCCATCTGTAATGGAAGAGATACAACGGCTTGGGTTGGACCAGCTGCCCTCAGATAGTGGCAGCCAGAAGCACAAAGAGACTATTGACTCGGCTAAAATGAAAAGAAAATCCGAAGATCTTGCAATTACAATCTATGTGCCTCCCAAATTGCGAAAGACAGAAAAGGTAGAACAAGTTGCACTGCCAATAGAGAATGGCATGCAAGCTAATAATGTTAGAAATTTGGATAGAAACAAAGGGGAGAGCTGGCCGCCTGTTGATTGGAGAACTGCACCAAGGTATAATGCTTGTGCAAATGGGTTTAGGACACAGTTGCCAATTTTAAATCCTAGAAGTGACTTACAAAAGAACAGGGAGGATAATTATAACAGATCTGTTAGACATATGGACAAGATGATTCCCATTACAGGTACTCCTCAGTGTGGCTCATCTAACTTTGGGAAGAGAGATCGTCTTAGTACTTGCACACCTGATGCAATACAAGCAAAGGAAACTGGAAGACTAGGTGAGCTTGCTGCTTTTAAATACTTCATTGATAAAGCTGGCAAATCAGCTGTGAAGTGGGTTAATGAGCATAGGGAAACAAGGCTACCATATGACATAATTGTAGACAATGAAGGTAGGAGAGAGTTCATTGAAGTTAAAGCAACCAGAAATCCAACCAAAGACTGGTTTGAAATGTCAGTGAGACAGTTGCAATTTGCAGTTGAGCAAGGTGAAGCTTTCAGTATTGCTCATGTCATTTTATCAGATAATGATGCTGCGACGGTGAGAATATACAACAATCTGGAGAAACTATTGATGATGCATAACAACCAGGAGCTACAGGACCAGGATTGCAAGCTGAAGTCAGTCGTCATGGTGCTTGAGCCACAGAAGGAATTTACCATTGTGTCCTGTAACTCACGTGATGGTGATGATCTCTGCATACTTGAAAATGGACTCAATACACTTGACCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

932

Amino Acids

103.84

Weight (kDa)

5.55

Isoelectric Point (pI)

58.38

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NOV_C PF13020 780 - 865 2.9e-18 Protein NO VEIN, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2199
AccB7I CCANNNNNTGG 1 cut(s) 2502
AccBSI CCGCTC 1 cut(s) 130
AccI GTMKAC 1 cut(s) 2442
AccII CGCG 1 cut(s) 426
AccIII TCCGGA 1 cut(s) 873
AcoI YGGCCR 1 cut(s) 2081
AcsI RAATTY 5 cut(s) 779, 834, 840, 2053, 2714
AcuI CTGAAG 5 cut(s) 711, 926, 1569, 1668, 2699
AcvI CACGTG 1 cut(s) 2741
AcyI GRCGYC 1 cut(s) 471
AfaI GTAC 7 cut(s) 17, 952, 1002, 1321, 1356, 2245, 2293
AfiI CCNNNNNNNGG 5 cut(s) 430, 656, 2240, 2255, 2502
AjnI CCWGG 5 cut(s) 1188, 1461, 1758, 2649, 2664
Alw21I GWGCWC 1 cut(s) 809
Alw26I GTCTC 9 cut(s) 333, 369, 428, 478, 1162, 1261, 1607, 1904, 2515
Alw44I GTGCAC 1 cut(s) 805
AlwNI CAGNNNCTG 1 cut(s) 409
Aor13HI TCCGGA 1 cut(s) 873
AoxI GGCC 4 cut(s) 100, 631, 959, 2081
ApaI GGGCCC 1 cut(s) 635
ApaLI GTGCAC 1 cut(s) 805
ApoI RAATTY 5 cut(s) 779, 834, 840, 2053, 2714
Asp700I GAANNNNTTC 2 cut(s) 559, 780
AspLEI GCGC 2 cut(s) 59, 428
AspS9I GGNCC 7 cut(s) 100, 631, 632, 959, 1573, 1870, 2662
AsuC2I CCSGG 1 cut(s) 463
AsuHPI GGTGA 6 cut(s) 1433, 1730, 2351, 2561, 2614, 2759
AsuII TTCGAA 2 cut(s) 550, 838
AvaII GGWCC 3 cut(s) 1573, 1870, 2662
BaeGI GKGCMC 2 cut(s) 635, 809
BanII GRGCYC 1 cut(s) 635
BbrPI CACGTG 1 cut(s) 2741
BbsI GAAGAC 2 cut(s) 831, 2338
Bbv12I GWGCWC 1 cut(s) 809
BceAI ACGGC 5 cut(s) 413, 453, 1227, 1577, 1874
BcgI CGANNNNNNTGC 2 cut(s) 1934, 1968
BciT130I CCWGG 5 cut(s) 1190, 1463, 1760, 2651, 2666
BciVI GTATCC 1 cut(s) 501
BcnI CCSGG 1 cut(s) 463
BcoDI GTCTC 9 cut(s) 333, 369, 428, 478, 1162, 1261, 1607, 1904, 2515
BfaI CTAG 6 cut(s) 258, 785, 882, 1029, 2163, 2336
BfmI CTRYAG 1 cut(s) 2657
BfuI GTATCC 1 cut(s) 501
BglII AGATCT 3 cut(s) 1651, 1948, 2204
BlpI GCTNAGC 1 cut(s) 1184
BmcAI AGTACT 1 cut(s) 2293
Bme1390I CCNGG 6 cut(s) 463, 1190, 1463, 1760, 2651, 2666
Bme18I GGWCC 3 cut(s) 1573, 1870, 2662
BmgT120I GGNCC 7 cut(s) 100, 631, 632, 959, 1573, 1870, 2662
BmiI GGNNCC 4 cut(s) 101, 633, 960, 1315
BmrFI CCNGG 6 cut(s) 463, 1190, 1463, 1760, 2651, 2666
BmsI GCATC 6 cut(s) 35, 673, 1048, 2296, 2581, 2628
BpiI GAAGAC 2 cut(s) 831, 2338
BpmI CTGGAG 5 cut(s) 431, 533, 936, 1380, 2642
Bpu10I CCTNAGC 1 cut(s) 850
Bpu1102I GCTNAGC 1 cut(s) 1184
Bpu14I TTCGAA 2 cut(s) 550, 838
BpuEI CTTGAG 2 cut(s) 172, 2720
BpuMI CCSGG 1 cut(s) 463
BsaAI YACGTR 2 cut(s) 1358, 2741
BsaHI GRCGYC 1 cut(s) 471
BsaJI CCNNGG 7 cut(s) 95, 429, 462, 1173, 1272, 1545, 2108
BsaWI WCCGGW 1 cut(s) 873
BsaXI ACNNNNNCTCC 4 cut(s) 263, 293, 2230, 2260
Bsc4I CCNNNNNNNGG 5 cut(s) 430, 656, 2240, 2255, 2502
Bse1I ACTGG 4 cut(s) 516, 1317, 2332, 2507
Bse3DI GCAATG 1 cut(s) 66
BseAI TCCGGA 1 cut(s) 873
BseBI CCWGG 5 cut(s) 1190, 1463, 1760, 2651, 2666
BseDI CCNNGG 7 cut(s) 95, 429, 462, 1173, 1272, 1545, 2108
BseGI GGATG 4 cut(s) 26, 295, 870, 1150
BseLI CCNNNNNNNGG 5 cut(s) 430, 656, 2240, 2255, 2502
BseMI GCAATG 1 cut(s) 66
BseMII CTCAG 8 cut(s) 300, 338, 684, 1198, 1419, 1716, 1896, 2264
BseNI ACTGG 4 cut(s) 516, 1317, 2332, 2507
BseRI GAGGAG 2 cut(s) 105, 2238
BseSI GKGCMC 2 cut(s) 635, 809
BseYI CCCAGC 2 cut(s) 220, 622
BsgI GTGCAG 1 cut(s) 2088
Bsh1236I CGCG 1 cut(s) 426
Bsh1285I CGRYCG 1 cut(s) 424
BshFI GGCC 4 cut(s) 102, 633, 961, 2083
BsiEI CGRYCG 1 cut(s) 424
BsiHKAI GWGCWC 1 cut(s) 809
BsiSI CCGG 4 cut(s) 54, 87, 462, 874
BsiWI CGTACG 1 cut(s) 1354
BslI CCNNNNNNNGG 5 cut(s) 430, 656, 2240, 2255, 2502
BsmAI GTCTC 9 cut(s) 333, 369, 428, 478, 1162, 1261, 1607, 1904, 2515
BsmBI CGTCTC 3 cut(s) 369, 428, 478
BsmI GAATGC 1 cut(s) 975
BsnI GGCC 4 cut(s) 102, 633, 961, 2083
Bsp119I TTCGAA 2 cut(s) 550, 838
Bsp120I GGGCCC 1 cut(s) 631
Bsp1286I GDGCHC 2 cut(s) 635, 809
Bsp13I TCCGGA 1 cut(s) 873
Bsp1407I TGTACA 1 cut(s) 15
Bsp143I GATC 7 cut(s) 448, 571, 1651, 1948, 2204, 2281, 2752
Bsp1720I GCTNAGC 1 cut(s) 1184
Bsp19I CCATGG 2 cut(s) 95, 1545
BspANI GGCC 4 cut(s) 102, 633, 961, 2083
BspCNI CTCAG 8 cut(s) 299, 337, 683, 1197, 1418, 1715, 1895, 2263
BspEI TCCGGA 1 cut(s) 873
BspFNI CGCG 1 cut(s) 426
BspLI GGNNCC 4 cut(s) 101, 633, 960, 1315
BspQI GCTCTTC 1 cut(s) 612
BspT104I TTCGAA 2 cut(s) 550, 838
BsrBI CCGCTC 1 cut(s) 130
BsrDI GCAATG 1 cut(s) 66
BsrGI TGTACA 1 cut(s) 15
BsrI ACTGG 4 cut(s) 516, 1317, 2332, 2507
BssECI CCNNGG 7 cut(s) 95, 429, 462, 1173, 1272, 1545, 2108
BssMI GATC 7 cut(s) 448, 571, 1651, 1948, 2204, 2281, 2752
BssNI GRCGYC 1 cut(s) 471
BssT1I CCWWGG 5 cut(s) 95, 1173, 1272, 1545, 2108
Bst2UI CCWGG 5 cut(s) 1190, 1463, 1760, 2651, 2666
Bst6I CTCTTC 5 cut(s) 86, 612, 1545, 1842, 2270
BstACI GRCGYC 1 cut(s) 471
BstAUI TGTACA 1 cut(s) 15
BstBAI YACGTR 2 cut(s) 1358, 2741
BstBI TTCGAA 2 cut(s) 550, 838
BstDSI CCRYGG 3 cut(s) 95, 429, 1545
BstF5I GGATG 4 cut(s) 26, 295, 870, 1150
BstFNI CGCG 1 cut(s) 426
BstHHI GCGC 2 cut(s) 59, 428
BstKTI GATC 7 cut(s) 451, 574, 1654, 1951, 2207, 2284, 2755
BstMAI GTCTC 9 cut(s) 333, 369, 428, 478, 1162, 1261, 1607, 1904, 2515
BstMBI GATC 7 cut(s) 448, 571, 1651, 1948, 2204, 2281, 2752
BstMCI CGRYCG 1 cut(s) 424
BstMWI GCNNNNNNNGC 6 cut(s) 65, 118, 127, 310, 319, 2315
BstNI CCWGG 5 cut(s) 1190, 1463, 1760, 2651, 2666
BstNSI RCATGY 3 cut(s) 1473, 1770, 2035
BstSCI CCNGG 6 cut(s) 461, 1188, 1461, 1758, 2649, 2664
BstSFI CTRYAG 1 cut(s) 2657
BstSLI GKGCMC 2 cut(s) 635, 809
BstSNI TACGTA 1 cut(s) 1358
BstUI CGCG 1 cut(s) 426
BstV2I GAAGAC 2 cut(s) 831, 2338
BstX2I RGATCY 3 cut(s) 1651, 1948, 2204
BstYI RGATCY 3 cut(s) 1651, 1948, 2204
BsuI GTATCC 1 cut(s) 501
BsuRI GGCC 4 cut(s) 102, 633, 961, 2083
BtgI CCRYGG 3 cut(s) 95, 429, 1545
BtgZI GCGATG 1 cut(s) 1248
BtsCI GGATG 4 cut(s) 26, 295, 870, 1150
BtsI GCAGTG 1 cut(s) 2012
BtsIMutI CAGTG 6 cut(s) 25, 678, 1144, 2012, 2258, 2523
CaiI CAGNNNCTG 1 cut(s) 409
CfoI GCGC 2 cut(s) 59, 428
Cfr13I GGNCC 7 cut(s) 100, 631, 632, 959, 1573, 1870, 2662
CseI GACGC 1 cut(s) 460
CsiI ACCWGGT 2 cut(s) 1461, 1758
Csp6I GTAC 7 cut(s) 16, 951, 1001, 1320, 1355, 2244, 2292
CviQI GTAC 7 cut(s) 16, 951, 1001, 1320, 1355, 2244, 2292
DpnI GATC 7 cut(s) 450, 573, 1653, 1950, 2206, 2283, 2754
DpnII GATC 7 cut(s) 448, 571, 1651, 1948, 2204, 2281, 2752
DraI TTTAAA 2 cut(s) 2157, 2356
EaeI YGGCCR 1 cut(s) 2081
Eam1104I CTCTTC 5 cut(s) 86, 612, 1545, 1842, 2270
EarI CTCTTC 5 cut(s) 86, 612, 1545, 1842, 2270
EciI GGCGGA 6 cut(s) 108, 309, 321, 345, 363, 369
Eco105I TACGTA 1 cut(s) 1358
Eco130I CCWWGG 5 cut(s) 95, 1173, 1272, 1545, 2108
Eco24I GRGCYC 1 cut(s) 635
Eco47I GGWCC 3 cut(s) 1573, 1870, 2662
Eco57I CTGAAG 5 cut(s) 711, 926, 1569, 1668, 2699
Eco72I CACGTG 1 cut(s) 2741
EcoO109I RGGNCCY 1 cut(s) 632
EcoRI GAATTC 2 cut(s) 834, 840
EcoRII CCWGG 5 cut(s) 1188, 1461, 1758, 2649, 2664
EcoT14I CCWWGG 5 cut(s) 95, 1173, 1272, 1545, 2108
EcoT22I ATGCAT 2 cut(s) 526, 2643
EcoT38I GRGCYC 1 cut(s) 635
ErhI CCWWGG 5 cut(s) 95, 1173, 1272, 1545, 2108
Esp3I CGTCTC 3 cut(s) 369, 428, 478
FalI AAGNNNNNCTT 2 cut(s) 544, 576
FauI CCCGC 1 cut(s) 351
FauNDI CATATG 2 cut(s) 2217, 2428
FblI GTMKAC 1 cut(s) 2442
FokI GGATG 4 cut(s) 13, 282, 857, 1157
FriOI GRGCYC 1 cut(s) 635
FspBI CTAG 6 cut(s) 258, 785, 882, 1029, 2163, 2336
GlaI GCGC 2 cut(s) 58, 427
GsaI CCCAGC 2 cut(s) 224, 626
GsuI CTGGAG 5 cut(s) 431, 533, 936, 1380, 2642
HaeIII GGCC 4 cut(s) 102, 633, 961, 2083
HapII CCGG 4 cut(s) 54, 87, 462, 874
HgaI GACGC 1 cut(s) 460
HhaI GCGC 2 cut(s) 59, 428
Hin1I GRCGYC 1 cut(s) 471
Hin6I GCGC 2 cut(s) 57, 426
HinP1I GCGC 2 cut(s) 57, 426
HincII GTYRAC 4 cut(s) 1096, 1195, 1483, 1780
HindII GTYRAC 4 cut(s) 1096, 1195, 1483, 1780
HindIII AAGCTT 1 cut(s) 2553
HpaI GTTAAC 4 cut(s) 1096, 1195, 1483, 1780
HpaII CCGG 4 cut(s) 54, 87, 462, 874
HphI GGTGA 6 cut(s) 1433, 1730, 2351, 2561, 2614, 2759
Hpy166II GTNNAC 8 cut(s) 755, 807, 1096, 1135, 1195, 1483, 1780, 2443
Hpy188III TCNNGA 8 cut(s) 575, 785, 874, 915, 945, 991, 1397, 2621
Hpy8I GTNNAC 8 cut(s) 755, 807, 1096, 1135, 1195, 1483, 1780, 2443
Hpy99I CGWCG 1 cut(s) 2602
HpyCH4IV ACGT 3 cut(s) 1098, 1357, 2740
HpyF10VI GCNNNNNNNGC 6 cut(s) 65, 118, 127, 310, 319, 2315
HpySE526I ACGT 3 cut(s) 1098, 1357, 2740
Hsp92I GRCGYC 1 cut(s) 471
HspAI GCGC 2 cut(s) 57, 426
Kpn2I TCCGGA 1 cut(s) 873
KspAI GTTAAC 4 cut(s) 1096, 1195, 1483, 1780
Kzo9I GATC 7 cut(s) 448, 571, 1651, 1948, 2204, 2281, 2752
LguI GCTCTTC 1 cut(s) 612
LmnI GCTCC 3 cut(s) 135, 167, 2653
LweI GCATC 6 cut(s) 35, 673, 1048, 2296, 2581, 2628
MabI ACCWGGT 2 cut(s) 1461, 1758
MaeI CTAG 6 cut(s) 258, 785, 882, 1029, 2163, 2336
MaeII ACGT 3 cut(s) 1098, 1357, 2740
MalI GATC 7 cut(s) 450, 573, 1653, 1950, 2206, 2283, 2754
MbiI CCGCTC 1 cut(s) 130
MboI GATC 7 cut(s) 448, 571, 1651, 1948, 2204, 2281, 2752
MflI RGATCY 3 cut(s) 1651, 1948, 2204
MhlI GDGCHC 2 cut(s) 635, 809
MlyI GAGTC 2 cut(s) 1913, 2769
MmeI TCCRAC 3 cut(s) 1551, 1848, 2516
Mph1103I ATGCAT 2 cut(s) 526, 2643
MroI TCCGGA 1 cut(s) 873
MroXI GAANNNNTTC 2 cut(s) 559, 780
MspA1I CMGCKG 5 cut(s) 406, 1527, 1824, 1876, 2387
MspI CCGG 4 cut(s) 54, 87, 462, 874
MspR9I CCNGG 6 cut(s) 463, 1190, 1463, 1760, 2651, 2666
Mva1269I GAATGC 1 cut(s) 975
MvaI CCWGG 5 cut(s) 1190, 1463, 1760, 2651, 2666
MvnI CGCG 1 cut(s) 426
MwoI GCNNNNNNNGC 6 cut(s) 65, 118, 127, 310, 319, 2315
NciI CCSGG 1 cut(s) 463
NcoI CCATGG 2 cut(s) 95, 1545
NdeI CATATG 2 cut(s) 2217, 2428
NdeII GATC 7 cut(s) 448, 571, 1651, 1948, 2204, 2281, 2752
NlaIV GGNNCC 4 cut(s) 101, 633, 960, 1315
NmeAIII GCCGAG 2 cut(s) 455, 1901
NmuCI GTSAC 9 cut(s) 487, 1203, 1457, 1491, 1748, 1754, 1762, 1788, 2168
NsiI ATGCAT 2 cut(s) 526, 2643
NspI RCATGY 3 cut(s) 1473, 1770, 2035
NspV TTCGAA 2 cut(s) 550, 838
PaeI GCATGC 1 cut(s) 2035
PciSI GCTCTTC 1 cut(s) 612
PcsI WCGNNNNNNNCGW 2 cut(s) 426, 497
PctI GAATGC 1 cut(s) 975
PdmI GAANNNNTTC 2 cut(s) 559, 780
PfeI GAWTC 8 cut(s) 417, 502, 893, 941, 1037, 1340, 1391, 2230
Pfl23II CGTACG 1 cut(s) 1354
PflFI GACNNNGTC 2 cut(s) 1076, 1760
PflMI CCANNNNNTGG 1 cut(s) 2502
PleI GAGTC 2 cut(s) 1913, 2769
PmaCI CACGTG 1 cut(s) 2741
PmlI CACGTG 1 cut(s) 2741
PpsI GAGTC 2 cut(s) 1913, 2769
Ppu21I YACGTR 2 cut(s) 1358, 2741
PsiI TTATAA 1 cut(s) 2199
Psp6I CCWGG 5 cut(s) 1188, 1461, 1758, 2649, 2664
PspCI CACGTG 1 cut(s) 2741
PspFI CCCAGC 2 cut(s) 220, 622
PspGI CCWGG 5 cut(s) 1188, 1461, 1758, 2649, 2664
PspLI CGTACG 1 cut(s) 1354
PspN4I GGNNCC 4 cut(s) 101, 633, 960, 1315
PspOMI GGGCCC 1 cut(s) 631
PspPI GGNCC 7 cut(s) 100, 631, 632, 959, 1573, 1870, 2662
PstNI CAGNNNCTG 1 cut(s) 409
PsuI RGATCY 3 cut(s) 1651, 1948, 2204
PsyI GACNNNGTC 2 cut(s) 1076, 1760
PvuII CAGCTG 4 cut(s) 1527, 1824, 1876, 2387
RsaI GTAC 7 cut(s) 17, 952, 1002, 1321, 1356, 2245, 2293
RsaNI GTAC 7 cut(s) 16, 951, 1001, 1320, 1355, 2244, 2292
SapI GCTCTTC 1 cut(s) 612
Sau3AI GATC 7 cut(s) 448, 571, 1651, 1948, 2204, 2281, 2752
Sau96I GGNCC 7 cut(s) 100, 631, 632, 959, 1573, 1870, 2662
ScaI AGTACT 1 cut(s) 2293
SchI GAGTC 2 cut(s) 1913, 2769
ScrFI CCNGG 6 cut(s) 463, 1190, 1463, 1760, 2651, 2666
SduI GDGCHC 2 cut(s) 635, 809
SexAI ACCWGGT 2 cut(s) 1461, 1758
SfaNI GCATC 6 cut(s) 35, 673, 1048, 2296, 2581, 2628
SfcI CTRYAG 1 cut(s) 2657
SfuI TTCGAA 2 cut(s) 550, 838
SinI GGWCC 3 cut(s) 1573, 1870, 2662
SmlI CTYRAG 2 cut(s) 187, 2699
SmoI CTYRAG 2 cut(s) 187, 2699
SnaBI TACGTA 1 cut(s) 1358
SphI GCATGC 1 cut(s) 2035
SspMI CTAG 6 cut(s) 258, 785, 882, 1029, 2163, 2336
StyD4I CCNGG 6 cut(s) 461, 1188, 1461, 1758, 2649, 2664
StyI CCWWGG 5 cut(s) 95, 1173, 1272, 1545, 2108
TaiI ACGT 3 cut(s) 1101, 1360, 2743
TaqI TCGA 3 cut(s) 420, 550, 838
TatI WGTACW 2 cut(s) 15, 2291
TauI GCSGC 7 cut(s) 124, 130, 313, 316, 409, 461, 2086
TfiI GAWTC 8 cut(s) 417, 502, 893, 941, 1037, 1340, 1391, 2230
TscAI CASTG 6 cut(s) 25, 678, 1144, 2019, 2258, 2523
TseFI GTSAC 9 cut(s) 487, 1203, 1457, 1491, 1748, 1754, 1762, 1788, 2168
Tsp45I GTSAC 9 cut(s) 487, 1203, 1457, 1491, 1748, 1754, 1762, 1788, 2168
TspGWI ACGGA 3 cut(s) 351, 988, 1342
TspRI CASTG 6 cut(s) 25, 678, 1144, 2019, 2258, 2523
Tth111I GACNNNGTC 2 cut(s) 1076, 1760
Van91I CCANNNNNTGG 1 cut(s) 2502
VneI GTGCAC 1 cut(s) 805
VpaK11BI GGWCC 3 cut(s) 1573, 1870, 2662
XapI RAATTY 5 cut(s) 779, 834, 840, 2053, 2714
XbaI TCTAGA 1 cut(s) 784
XceI RCATGY 3 cut(s) 1473, 1770, 2035
XcmI CCANNNNNNNNNTGG 2 cut(s) 539, 2499
XmiI GTMKAC 1 cut(s) 2442
XmnI GAANNNNTTC 2 cut(s) 559, 780
XspI CTAG 6 cut(s) 258, 785, 882, 1029, 2163, 2336
ZrmI AGTACT 1 cut(s) 2293
Zsp2I ATGCAT 2 cut(s) 526, 2643
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.