Rmu_sc0008100.1_g000005

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008100.1
OG0000582
Physical Location & Seq
Reverse (-)
29853 .. 33504
3652 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008100.1_g000005.1.cds

Sequence Viewer

Length: 2169 bp
atggggttcaagacattagtttctcttgacgatggtctagaggtattgaaactatggaggtgtgataacccattcagggccagcatagcgcaaatgttcaaattttacacattaatctggaacgaaatggccacttcgaagccaagggttttagaggagttccattccaaaccttctatttttgttccatatgcatctagctcaaggcatgaggatgtggtgtctggtacatttttgtcccctgaggaagtatattggtatgattcgacttccttcgtggaccaaatcaagcagatacatcctcagtgcagcccaacaggtgttactcatggccccttgaataagacattgtgcaacttttatcctggccttcatgacttctttgttgatggatgtggagtacctgagacccctcctctccgtagttacctacagattttgctgcatttatcaaaggttgctctgccttcacaagcagctaatgccgtttttcaagtctttattaagtggactgatggactgaaatcaggaatgagccctgaggatattgtttacattagagattctcttaagaagatggaatgcatggtgcttcctactgtacatgataagtgggtttctttacatccatccttcggtcttgtatgctggtgtgatgagaagaaattaagcaagcagtttaagcatttggatggtattgattttttatactttggtcaattgaccaaggacaatgaagagatactacgtacgaaagtgtcgaacctcatgcaaactttagggattcctgctctttcacaggttgtgactcgtgaggcaatatattatggcctgcaagacagtagcgatgaagctgcattggtaaattcagctcttccatatgcacagcgctacttgcatagtctacacccagataaatattctcaactcaagcagtctggatttgatatcctaaattgtttgcaagtagtagttgttgaagagctgtactatcgaaatgttataaaagttgtgggaagtgaatctaagaagcgggttgcatgtagttgtcttctgaagggtagcatgttgtatacaacccgagaatcagattctcacacattatttatggaactttctcgtttgttttttaatggaaatcctgaactgcacttggcgaatttccttcatatcatcacaaccatggaaaaatcaggtttgaatgaggagcagatagagttatttatcctcaatagccaaaaggtgccgaagcttcctgatggggaatgtgtttggtccctttcttctttgcactcattgactgaggatgatgaatcactccagacaagtaatacttcaatggaagcaaatgaacaaaacagttggaaagccaaaaggaaagcagaaaactggccgcctgttgattggaaaactgcaccagggtttgcgtatgcacgtgcacatggttttaagacacagccaacagttttacagccctatggcgccttacaaaataagatggatgatgattctgaaggaattgttggacaaatagataatttggctcacagttctgtggatgctaattggacgttggaagattattcagcaactgcatctttagctttgccagacaataatgatttgctagaacatcgtggggagcatttcaatgactctgactttgcatcacatattgaatttgatcccatcaatcttggtcttgtttccgaccctccagagttgggctcatccaatgttggcaagagagagcagcttagatatggcacacccaatgctacacaagcaattatgactgggagacttggagagcttgttgcttttaaatattttgttgagaaaggcggcaagtcagcagtcaagtgggttaatgagcacaatgaaacagggctaccctatgacatagtgctgggggagaacaataaggagtacattgaagtgaaagcaacgaaatctgcaagaaaagattggtttgaaatatcaatgaatgagttgcaatttgcagttgagaaaggtgaagcttttagcatagctcatgtcatcttattagataataatgttgcaaaggtcagagtgtacaacaatctggcaaagttatgccagcttcgccaactgaagttagctgtattggtgcctgtgcagcagaaagaattcgccattgtatcttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

722

Amino Acids

81.47

Weight (kDa)

5.59

Isoelectric Point (pI)

40.74

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1004
AccB1I GGYRCC 3 cut(s) 1243, 1481, 2131
AccI GTMKAC 2 cut(s) 904, 1073
AciI CCGC 3 cut(s) 1033, 1394, 1845
AclWI GGATC 1 cut(s) 1679
AcoI YGGCCR 2 cut(s) 129, 1391
AcsI RAATTY 5 cut(s) 101, 865, 1159, 1679, 2150
AcuI CTGAAG 3 cut(s) 1076, 1533, 2135
AcvI CACGTG 1 cut(s) 1436
AcyI GRCGYC 1 cut(s) 1482
AfaI GTAC 7 cut(s) 229, 402, 603, 751, 989, 1931, 2078
AfeI AGCGCT 1 cut(s) 890
AfiI CCNNNNNNNGG 3 cut(s) 76, 635, 1724
AflII CTTAAG 1 cut(s) 569
AjnI CCWGG 2 cut(s) 364, 1417
AjuI GAANNNNNNNTTGG 2 cut(s) 1506, 1538
Alw21I GWGCWC 2 cut(s) 1441, 1878
Alw26I GTCTC 2 cut(s) 401, 1795
Alw44I GTGCAC 1 cut(s) 1437
AlwI GGATC 1 cut(s) 1679
AlwNI CAGNNNCTG 1 cut(s) 1592
Ama87I CYCGRG 1 cut(s) 1080
Aor51HI AGCGCT 1 cut(s) 890
AoxI GGCC 6 cut(s) 78, 129, 331, 367, 829, 1391
ApaLI GTGCAC 1 cut(s) 1437
ApeKI GCWGC 6 cut(s) 309, 442, 476, 854, 1753, 2140
ApoI RAATTY 5 cut(s) 101, 865, 1159, 1679, 2150
ArsI GACNNNNNNTTYG 2 cut(s) 1646, 1678
AseI ATTAAT 1 cut(s) 113
Asp700I GAANNNNTTC 1 cut(s) 2150
AspLEI GCGC 3 cut(s) 91, 891, 1484
AspS9I GGNCC 4 cut(s) 78, 280, 332, 1275
AsuHPI GGTGA 1 cut(s) 2027
AsuII TTCGAA 1 cut(s) 137
AvaI CYCGRG 1 cut(s) 1080
AvaII GGWCC 2 cut(s) 280, 1275
AxyI CCTNAGG 2 cut(s) 243, 540
BaeGI GKGCMC 1 cut(s) 1441
BalI TGGCCA 1 cut(s) 131
BanI GGYRCC 3 cut(s) 1243, 1481, 2131
BanII GRGCYC 2 cut(s) 539, 1730
BarI GAAGNNNNNNTAC 2 cut(s) 729, 761
BauI CACGAG 1 cut(s) 810
BbrPI CACGTG 1 cut(s) 1436
BbsI GAAGAC 1 cut(s) 1043
Bbv12I GWGCWC 2 cut(s) 1441, 1878
BbvI GCAGC 6 cut(s) 321, 429, 488, 841, 1765, 2152
BccI CCATC 9 cut(s) 26, 383, 509, 571, 637, 686, 1253, 1492, 1697
BceAI ACGGC 1 cut(s) 470
BcgI CGANNNNNNTGC 4 cut(s) 751, 785, 836, 870
BciT130I CCWGG 2 cut(s) 366, 1419
BcoDI GTCTC 2 cut(s) 401, 1795
BfaI CTAG 3 cut(s) 38, 198, 1628
BfmI CTRYAG 1 cut(s) 431
BfoI RGCGCY 2 cut(s) 892, 1485
BfrI CTTAAG 1 cut(s) 569
BisI GCNGC 8 cut(s) 310, 443, 477, 855, 1394, 1754, 1846, 2141
BlsI GCNGC 8 cut(s) 311, 444, 478, 856, 1395, 1755, 1847, 2142
Bme1390I CCNGG 2 cut(s) 366, 1419
Bme18I GGWCC 2 cut(s) 280, 1275
BmeT110I CYCGRG 1 cut(s) 1080
BmgT120I GGNCC 4 cut(s) 78, 280, 332, 1275
BmiI GGNNCC 5 cut(s) 334, 1245, 1277, 1483, 2133
BmrFI CCNGG 2 cut(s) 366, 1419
BmrI ACTGGG 1 cut(s) 1806
BmsI GCATC 4 cut(s) 203, 1549, 1604, 1676
BmuI ACTGGG 1 cut(s) 1806
BoxI GACNNNNGTC 1 cut(s) 33
BpiI GAAGAC 1 cut(s) 1043
BplI GAGNNNNNCTC 2 cut(s) 1712, 1744
BpmI CTGGAG 2 cut(s) 1304, 1701
Bpu14I TTCGAA 1 cut(s) 137
BpuEI CTTGAG 2 cut(s) 187, 914
BsaAI YACGTR 2 cut(s) 749, 1436
BsaHI GRCGYC 1 cut(s) 1482
BsaI GGTCTC 1 cut(s) 401
BsaJI CCNNGG 4 cut(s) 143, 726, 1182, 1418
BsaXI ACNNNNNCTCC 2 cut(s) 1800, 1830
Bsc4I CCNNNNNNNGG 3 cut(s) 76, 635, 1724
Bse1I ACTGG 2 cut(s) 1394, 1801
Bse21I CCTNAGG 2 cut(s) 243, 540
BseBI CCWGG 2 cut(s) 366, 1419
BseDI CCNNGG 4 cut(s) 143, 726, 1182, 1418
BseLI CCNNNNNNNGG 3 cut(s) 76, 635, 1724
BseMII CTCAG 5 cut(s) 234, 317, 396, 531, 1293
BseNI ACTGG 2 cut(s) 1394, 1801
BseRI GAGGAG 3 cut(s) 170, 405, 1220
BseSI GKGCMC 1 cut(s) 1441
BseXI GCAGC 6 cut(s) 321, 429, 488, 841, 1765, 2152
BseYI CCCAGC 1 cut(s) 1909
BsgI GTGCAG 4 cut(s) 328, 1133, 1398, 2159
BshFI GGCC 6 cut(s) 80, 131, 333, 369, 831, 1393
BshNI GGYRCC 3 cut(s) 1243, 1481, 2131
BsiHKAI GWGCWC 2 cut(s) 1441, 1878
BsiHKCI CYCGRG 1 cut(s) 1080
BsiWI CGTACG 1 cut(s) 749
BslFI GGGAC 2 cut(s) 223, 1261
BslI CCNNNNNNNGG 3 cut(s) 76, 635, 1724
BsmAI GTCTC 2 cut(s) 401, 1795
BsmFI GGGAC 2 cut(s) 223, 1261
BsmI GAATGC 1 cut(s) 587
BsnI GGCC 6 cut(s) 80, 131, 333, 369, 831, 1393
Bso31I GGTCTC 1 cut(s) 401
BsoBI CYCGRG 1 cut(s) 1080
Bsp119I TTCGAA 1 cut(s) 137
Bsp1286I GDGCHC 4 cut(s) 539, 1441, 1730, 1878
Bsp1407I TGTACA 2 cut(s) 601, 2076
Bsp143I GATC 1 cut(s) 1684
Bsp19I CCATGG 1 cut(s) 1182
BspACI CCGC 3 cut(s) 1033, 1394, 1845
BspANI GGCC 6 cut(s) 80, 131, 333, 369, 831, 1393
BspCNI CTCAG 5 cut(s) 235, 316, 397, 532, 1294
BspHI TCATGA 1 cut(s) 373
BspLI GGNNCC 5 cut(s) 334, 1245, 1277, 1483, 2133
BspPI GGATC 1 cut(s) 1679
BspQI GCTCTTC 2 cut(s) 879, 975
BspT104I TTCGAA 1 cut(s) 137
BspT107I GGYRCC 3 cut(s) 1243, 1481, 2131
BspTI CTTAAG 1 cut(s) 569
BspTNI GGTCTC 1 cut(s) 401
BsrGI TGTACA 2 cut(s) 601, 2076
BsrI ACTGG 2 cut(s) 1394, 1801
BssECI CCNNGG 4 cut(s) 143, 726, 1182, 1418
BssMI GATC 1 cut(s) 1684
BssNAI GTATAC 1 cut(s) 1074
BssNI GRCGYC 1 cut(s) 1482
BssSI CACGAG 1 cut(s) 810
BssT1I CCWWGG 3 cut(s) 143, 726, 1182
Bst1107I GTATAC 1 cut(s) 1074
Bst2BI CACGAG 1 cut(s) 810
Bst2UI CCWGG 2 cut(s) 366, 1419
Bst4CI ACNGT 5 cut(s) 601, 842, 1361, 1465, 1550
Bst6I CTCTTC 3 cut(s) 732, 879, 975
BstACI GRCGYC 1 cut(s) 1482
BstAFI CTTAAG 1 cut(s) 569
BstAPI GCANNNNNTGC 1 cut(s) 482
BstAUI TGTACA 2 cut(s) 601, 2076
BstBAI YACGTR 2 cut(s) 749, 1436
BstBI TTCGAA 1 cut(s) 137
BstC8I GCNNGC 4 cut(s) 82, 674, 833, 2102
BstDEI CTNAG 7 cut(s) 243, 303, 405, 540, 1026, 1302, 1757
BstDSI CCRYGG 1 cut(s) 1182
BstH2I RGCGCY 2 cut(s) 892, 1485
BstHHI GCGC 3 cut(s) 91, 891, 1484
BstKTI GATC 1 cut(s) 1687
BstMAI GTCTC 2 cut(s) 401, 1795
BstMBI GATC 1 cut(s) 1684
BstMWI GCNNNNNNNGC 8 cut(s) 86, 482, 682, 895, 1601, 1784, 2106, 2140
BstNI CCWGG 2 cut(s) 366, 1419
BstNSI RCATGY 2 cut(s) 1044, 1069
BstPAI GACNNNNGTC 1 cut(s) 33
BstSCI CCNGG 2 cut(s) 364, 1417
BstSFI CTRYAG 1 cut(s) 431
BstSLI GKGCMC 1 cut(s) 1441
BstSNI TACGTA 1 cut(s) 749
BstV1I GCAGC 6 cut(s) 321, 429, 488, 841, 1765, 2152
BstV2I GAAGAC 1 cut(s) 1043
BstZ17I GTATAC 1 cut(s) 1074
Bsu36I CCTNAGG 2 cut(s) 243, 540
BsuRI GGCC 6 cut(s) 80, 131, 333, 369, 831, 1393
BtgI CCRYGG 1 cut(s) 1182
BtgZI GCGATG 1 cut(s) 861
BtsIMutI CAGTG 1 cut(s) 311
Cac8I GCNNGC 4 cut(s) 82, 674, 833, 2102
CaiI CAGNNNCTG 1 cut(s) 1592
CciI TCATGA 1 cut(s) 373
CfoI GCGC 3 cut(s) 91, 891, 1484
Cfr13I GGNCC 4 cut(s) 78, 280, 332, 1275
Csp6I GTAC 7 cut(s) 228, 401, 602, 750, 988, 1930, 2077
CviQI GTAC 7 cut(s) 228, 401, 602, 750, 988, 1930, 2077
DdeI CTNAG 7 cut(s) 243, 303, 405, 540, 1026, 1302, 1757
DinI GGCGCC 1 cut(s) 1483
DpnI GATC 1 cut(s) 1686
DpnII GATC 1 cut(s) 1684
DraI TTTAAA 1 cut(s) 1825
EaeI YGGCCR 2 cut(s) 129, 1391
Eam1104I CTCTTC 3 cut(s) 732, 879, 975
EarI CTCTTC 3 cut(s) 732, 879, 975
Eco105I TACGTA 1 cut(s) 749
Eco130I CCWWGG 3 cut(s) 143, 726, 1182
Eco24I GRGCYC 2 cut(s) 539, 1730
Eco31I GGTCTC 1 cut(s) 401
Eco32I GATATC 1 cut(s) 949
Eco47I GGWCC 2 cut(s) 280, 1275
Eco47III AGCGCT 1 cut(s) 890
Eco57I CTGAAG 3 cut(s) 1076, 1533, 2135
Eco72I CACGTG 1 cut(s) 1436
Eco81I CCTNAGG 2 cut(s) 243, 540
Eco88I CYCGRG 1 cut(s) 1080
EcoRI GAATTC 1 cut(s) 2150
EcoRII CCWGG 2 cut(s) 364, 1417
EcoRV GATATC 1 cut(s) 949
EcoT14I CCWWGG 3 cut(s) 143, 726, 1182
EcoT22I ATGCAT 2 cut(s) 196, 587
EcoT38I GRGCYC 2 cut(s) 539, 1730
EgeI GGCGCC 1 cut(s) 1483
EheI GGCGCC 1 cut(s) 1483
ErhI CCWWGG 3 cut(s) 143, 726, 1182
FalI AAGNNNNNCTT 2 cut(s) 1318, 1350
FaqI GGGAC 2 cut(s) 223, 1261
FauI CCCGC 1 cut(s) 1026
FauNDI CATATG 2 cut(s) 190, 880
FblI GTMKAC 2 cut(s) 904, 1073
Fnu4HI GCNGC 8 cut(s) 310, 443, 477, 855, 1394, 1754, 1846, 2141
FriOI GRGCYC 2 cut(s) 539, 1730
Fsp4HI GCNGC 8 cut(s) 310, 443, 477, 855, 1394, 1754, 1846, 2141
FspBI CTAG 3 cut(s) 38, 198, 1628
GlaI GCGC 3 cut(s) 90, 890, 1483
GluI GCNGC 8 cut(s) 310, 443, 477, 855, 1394, 1754, 1846, 2141
GsaI CCCAGC 1 cut(s) 1913
GsuI CTGGAG 2 cut(s) 1304, 1701
HaeII RGCGCY 2 cut(s) 892, 1485
HaeIII GGCC 6 cut(s) 80, 131, 333, 369, 831, 1393
HhaI GCGC 3 cut(s) 91, 891, 1484
Hin1I GRCGYC 1 cut(s) 1482
Hin6I GCGC 3 cut(s) 89, 889, 1482
HinP1I GCGC 3 cut(s) 89, 889, 1482
HindIII AAGCTT 2 cut(s) 1250, 2019
HphI GGTGA 1 cut(s) 2027
Hpy166II GTNNAC 7 cut(s) 280, 510, 553, 905, 1074, 1439, 2077
Hpy188I TCNGA 6 cut(s) 1056, 1090, 1513, 1660, 1711, 2072
Hpy8I GTNNAC 7 cut(s) 280, 510, 553, 905, 1074, 1439, 2077
HpyAV CCTTC 8 cut(s) 183, 283, 380, 477, 643, 1051, 1175, 1508
HpyCH4III ACNGT 5 cut(s) 601, 842, 1361, 1465, 1550
HpyCH4IV ACGT 3 cut(s) 748, 1435, 1571
HpyF10VI GCNNNNNNNGC 8 cut(s) 86, 482, 682, 895, 1601, 1784, 2106, 2140
HpyF3I CTNAG 7 cut(s) 243, 303, 405, 540, 1026, 1302, 1757
HpySE526I ACGT 3 cut(s) 748, 1435, 1571
Hsp92I GRCGYC 1 cut(s) 1482
HspAI GCGC 3 cut(s) 89, 889, 1482
KasI GGCGCC 1 cut(s) 1481
Kzo9I GATC 1 cut(s) 1684
LguI GCTCTTC 2 cut(s) 879, 975
LmnI GCTCC 2 cut(s) 1207, 1642
Lsp1109I GCAGC 6 cut(s) 321, 429, 488, 841, 1765, 2152
LweI GCATC 4 cut(s) 203, 1549, 1604, 1676
MaeI CTAG 3 cut(s) 38, 198, 1628
MaeII ACGT 3 cut(s) 748, 1435, 1571
MaeIII GTNAC 3 cut(s) 322, 425, 805
MalI GATC 1 cut(s) 1686
MboI GATC 1 cut(s) 1684
MboII GAAGA 8 cut(s) 586, 673, 749, 866, 992, 1043, 1275, 1589
MfeI CAATTG 1 cut(s) 719
MhlI GDGCHC 4 cut(s) 539, 1441, 1730, 1878
MlsI TGGCCA 1 cut(s) 131
MluNI TGGCCA 1 cut(s) 131
Mly113I GGCGCC 1 cut(s) 1482
MlyI GAGTC 2 cut(s) 802, 1649
MmeI TCCRAC 4 cut(s) 1343, 1504, 1554, 1734
Mox20I TGGCCA 1 cut(s) 131
Mph1103I ATGCAT 2 cut(s) 196, 587
MroXI GAANNNNTTC 1 cut(s) 2150
MscI TGGCCA 1 cut(s) 131
MslI CAYNNNNRTG 5 cut(s) 213, 690, 1181, 1650, 1937
Msp20I TGGCCA 1 cut(s) 131
MspCI CTTAAG 1 cut(s) 569
MspR9I CCNGG 2 cut(s) 366, 1419
MunI CAATTG 1 cut(s) 719
Mva1269I GAATGC 1 cut(s) 587
MvaI CCWGG 2 cut(s) 366, 1419
MwoI GCNNNNNNNGC 8 cut(s) 86, 482, 682, 895, 1601, 1784, 2106, 2140
NarI GGCGCC 1 cut(s) 1482
NcoI CCATGG 1 cut(s) 1182
NdeI CATATG 2 cut(s) 190, 880
NdeII GATC 1 cut(s) 1684
NlaIV GGNNCC 5 cut(s) 334, 1245, 1277, 1483, 2133
NmuCI GTSAC 1 cut(s) 805
NsiI ATGCAT 2 cut(s) 196, 587
NspI RCATGY 2 cut(s) 1044, 1069
NspV TTCGAA 1 cut(s) 137
PagI TCATGA 1 cut(s) 373
PciSI GCTCTTC 2 cut(s) 879, 975
PcsI WCGNNNNNNNCGW 1 cut(s) 758
PctI GAATGC 1 cut(s) 587
PdmI GAANNNNTTC 1 cut(s) 2150
PfeI GAWTC 8 cut(s) 263, 563, 784, 1022, 1085, 1091, 1313, 1508
Pfl23II CGTACG 1 cut(s) 749
PkrI GCNGC 8 cut(s) 311, 444, 478, 856, 1395, 1755, 1847, 2142
PleI GAGTC 2 cut(s) 802, 1649
PluTI GGCGCC 1 cut(s) 1485
PmaCI CACGTG 1 cut(s) 1436
PmlI CACGTG 1 cut(s) 1436
PpsI GAGTC 2 cut(s) 802, 1649
Ppu21I YACGTR 2 cut(s) 749, 1436
PshAI GACNNNNGTC 1 cut(s) 33
PshBI ATTAAT 1 cut(s) 113
PsiI TTATAA 1 cut(s) 1004
Psp6I CCWGG 2 cut(s) 364, 1417
PspCI CACGTG 1 cut(s) 1436
PspFI CCCAGC 1 cut(s) 1909
PspGI CCWGG 2 cut(s) 364, 1417
PspLI CGTACG 1 cut(s) 749
PspN4I GGNNCC 5 cut(s) 334, 1245, 1277, 1483, 2133
PspPI GGNCC 4 cut(s) 78, 280, 332, 1275
PstNI CAGNNNCTG 1 cut(s) 1592
RsaI GTAC 7 cut(s) 229, 402, 603, 751, 989, 1931, 2078
RsaNI GTAC 7 cut(s) 228, 401, 602, 750, 988, 1930, 2077
RseI CAYNNNNRTG 5 cut(s) 213, 690, 1181, 1650, 1937
SapI GCTCTTC 2 cut(s) 879, 975
SatI GCNGC 8 cut(s) 310, 443, 477, 855, 1394, 1754, 1846, 2141
Sau3AI GATC 1 cut(s) 1684
Sau96I GGNCC 4 cut(s) 78, 280, 332, 1275
SchI GAGTC 2 cut(s) 802, 1649
ScrFI CCNGG 2 cut(s) 366, 1419
SduI GDGCHC 4 cut(s) 539, 1441, 1730, 1878
SfaNI GCATC 4 cut(s) 203, 1549, 1604, 1676
SfcI CTRYAG 1 cut(s) 431
SfoI GGCGCC 1 cut(s) 1483
SfuI TTCGAA 1 cut(s) 137
SinI GGWCC 2 cut(s) 280, 1275
SmiMI CAYNNNNRTG 5 cut(s) 213, 690, 1181, 1650, 1937
SmlI CTYRAG 3 cut(s) 202, 569, 929
SmoI CTYRAG 3 cut(s) 202, 569, 929
SnaBI TACGTA 1 cut(s) 749
SsiI CCGC 3 cut(s) 1033, 1394, 1845
SspDI GGCGCC 1 cut(s) 1481
SspI AATATT 2 cut(s) 920, 1829
SspMI CTAG 3 cut(s) 38, 198, 1628
StyD4I CCNGG 2 cut(s) 364, 1417
StyI CCWWGG 3 cut(s) 143, 726, 1182
TaaI ACNGT 5 cut(s) 601, 842, 1361, 1465, 1550
TaiI ACGT 3 cut(s) 751, 1438, 1574
TaqI TCGA 4 cut(s) 137, 266, 761, 994
TaqII GACCGA 1 cut(s) 626
TatI WGTACW 4 cut(s) 601, 987, 1929, 2076
TauI GCSGC 2 cut(s) 1396, 1848
TfiI GAWTC 8 cut(s) 263, 563, 784, 1022, 1085, 1091, 1313, 1508
TscAI CASTG 1 cut(s) 311
TseFI GTSAC 1 cut(s) 805
TseI GCWGC 6 cut(s) 309, 442, 476, 854, 1753, 2140
Tsp45I GTSAC 1 cut(s) 805
TspDTI ATGAA 8 cut(s) 362, 750, 864, 1157, 1326, 1365, 1896, 2000
TspGWI ACGGA 1 cut(s) 410
TspRI CASTG 1 cut(s) 311
Vha464I CTTAAG 1 cut(s) 569
VneI GTGCAC 1 cut(s) 1437
VpaK11BI GGWCC 2 cut(s) 280, 1275
VspI ATTAAT 1 cut(s) 113
XapI RAATTY 5 cut(s) 101, 865, 1159, 1679, 2150
XbaI TCTAGA 1 cut(s) 37
XceI RCATGY 2 cut(s) 1044, 1069
XmiI GTMKAC 2 cut(s) 904, 1073
XmnI GAANNNNTTC 1 cut(s) 2150
XspI CTAG 3 cut(s) 38, 198, 1628
Zsp2I ATGCAT 2 cut(s) 196, 587
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.