Prupe.1G159200_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000582
Physical Location & Seq
Reverse (-)
12626657 .. 12642875
16219 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G159200.1

Sequence Viewer

Length: 8223 bp
ATGTACGGACGCCCTTCTAGCTCCTCCGGCGGCGCATGGGGTCAGCCGCCGCAGCAACCTCAAGGCACTAATTTCTATCTCCAAAACCCCATCAATTCGTCGTATATTTATCCTTCAAACACCCCCTTTATACCCCACAATGCCCACAACCCCTACCAAAACTTCCCTCCTAATAATGTCCCAATCCAAAGCCCTAAGTTCCCTGTCCAAAACCCTGGATTTAATCCTCCTCCACAGCAGTTTTCAAACCCGGCAGGGTTTCGGCCTCCGAACTCGAGAGATATGCTCGAGAGAATCGACCGCGCCGTGGGGAAGGCTCGCGACGAACATGCCGCTGCTGGAGAGAACGTCTCGGCGTGGAAGGTCTCGCAGTCTGCGCTTCTGATGCTCAAGGTTGATTGCTGGAGCTCTCTGGGGTTTCAAATGCAGCAAGTGCCGACTTTGCACCGCCTCATGCTCACTGAAGGGAAGATAAATGCATTTATCCATTGTTTTGTTGGGGCTCGAAGAATTACTTCATTGTATGATTTGGAAGTAGCAATCTGCAAGAATGAGGGAATTGAGCAGTTTGAAGAGCTGGGATTGGGCCCTTTGTTGCGACATCCACTTGTTATGCATTATTTCTCAGTGAAGTCTGATACAACTGAAGTATTTAAGATAACTAGTGGGGAGATGATATATCTACTTTCTGAGTTCATGGATACTTGTGAAAATAAAGATATTAGGGTTGAAGAATATTTAGATTTCATTGTTAAGAAGCGATCAGTTGCAAGCAAGGAGGCACTTGGAATACGAATTCACAGCATGGGGATGCATATTTCTGCCATCCGGAAAGCCAGGAATCTAGAAATTTCCACTCTAAAGAAATTGGAGAAGGCATTTCAGCCAAATTCAGATAAAAAGGATAGGAAGTTTCCACTTTTATCTGCAGAGAAAAAGGAGTTAGACAAACGTTTCAGCACTATTTCTCAGCGCGTTGAATCGTTTTCCCCCATACATAAGGATTTTTGTGGCAAGCACATTAGATTTGATCCTTCAAGCTCAGAGGATGAAGGTAGGGATGATTATTTATCTGAAGAGAATGATGAAAATAATGACCATGTAACAGGCAGTCAGGTTAACTTCTCATCACAGTCTGTTAAAAGTTCTGACCGAGTGAGTAGTTGTCCTTACCCGTCTGTAATAGAAGAGAGGAGAAGGCTTGGGTTGAGCGAGCTTTCTCCAGCTAGTGGCAGCCAAAAGCACAATGATAGTAGTGGGTCAGTTAAAAAGAAAAGAAAATCTGAACACATAAACAGTGCAATCTCCATGCCCCACAAACTGCGTAAGAGAGATAAGGTACAAGATGCCCTTCCAATGGAAAATGGCAGGGAAACCAATGAGGTTAGCAATTTGCCTGAAAATGATCTTTCAATTGACAATAATGATTTGAGGATGTTCATTACAACCTGGAAGGAGGCATGTCTGGAGTACACTGTGGATGAGGTACTTGATAGGATGCTGCAGTTTAATAATACTAAAGCTCAGAAGAGAAAGAAAATCAAGTCAATGTTTTCATTGTATCCATTAATTGGATTACTAAATGTTGCTGTCTCATCTATCAAATGTGGAATGTGGGATAGCATGTATGACACATTCCAAACCATTGGTCAATATGAATTAACTGACAGTATTACTGATAACTGTCCCGAATATGTGAACATAGATGTTGAACCAAGTACTAAAGATGAGCCAAGAATTAAGGATCCACCAGTCATCAATGAACGTATTGTTGAGCACATTCAGAGTGTTTCTGTTGAGGACATAATCAGGAAAGTTACCGTGTATTTCGAGAGCGATCAAGGAAAACATAACAATGGTCAATCACTTCTGGAGAAGACTTTTATCTTCTTGAGGAAGCTTTGCAATTGCGAGGTTTGGTTGGTGAAAGAATTTTGTGTAAAGGAATTTAAATCCCTTGGTTATGGGGAGTTTTTGATGTTCTTAGAAAAATATGCTTGTCTACTGCCACATGAGCTGTGCAAGTTCCTGACTGGTGACTTGAGTGGAAAGTGTCCTTTCGAGGTTTGCATGCTCCAGCACCATTTGGTTGTTTTAGTATCTCAAGCTTTAAATAGCTTATGGGAGGATGAAAAAGTTACCAAACAAAATATAGTGTTGCTGCTTAGGAAGCAGTTCCCTTTGGTTTGTTTCAAAACTATCGAAAATGGTTCAGTGGAAGATTTCTTAAGCATAGTGGGAAAACATAAAAATGCTGCGAGTTCGAAATGTGTTCTATTTTCAATGGCACTGTGTGGAACTAGTTATGCTATAGAGTCATCATTACACATTGAGAATGTCCTGTGGAAAAGAACTTCGGTCAATACTGACAGTGGCCAGAAAGCAAAGTCCCATGAAACTGTTACATCCAAGGATGCAATTGAAGTTTTACTTACAGCACCAGTGATGTCAGATTTAAATTTATGGTCGCATTGGGACCTATTGTTTGCTCCCTCTCTTGGCCCTCTTGTACCATGGCTATTGAATGAAGTCAACACAGATGAACTGTTGTGTTTGGTGACAAAAGGTGGAAAAGTGATTCGGTTAGATCATTCAGCTACCGTGGATTCATTCTTGGAATCTGCACTTCAAGGATCCTCTTTTCAAACAGCAGTGAAAATGCTATCTCTGTTTTCACTAGTTGGGGGAGAAAAACATGTCCCTGTGTCGCTTTTGAAAATTCATATAAAACATGCATTTGAAGTAATTCAGAAGAATTATCTAGACGATATAGAACTACAAGACAATAAGAATTCCATTAATTATGGAAAAGCACTATCTGGACAAAAAATGGTTGGTGAAGTTGCTACTGGTAAATTCTGTAGTAAATTACACAAGGACTTGAGCAAGATGAATATTGCAACAACTGTTATATCAAGATTTTTCCTTGAATGTCTTGGGTATCTACCTGCAGAATTTCGTTATTTTGCTGCTGATGTATTGCTTTCTGGGATGCAGTCTGTTGTTAAACATGCTGCTTCAGCTGTTCTGAATGAATGCAGCCAGTCAGAGCAACGTCTCATGCTTCATGAAGTTGGGTTGTCTCTTGGTGTAGTGGAGTGGATTAATGATTACTATGCATTTTGTTCCAGTGATGCTACTGGCTTGTTCATATCAGGGGCTTCATGTTTCAATGCTATTAGGTATGAAACAGGGTCAAGCTCAAAGAATATGCAAGATGTGTCAGATAAGTTTTCCGTTAGGGCAGATGAGCATAAAGGCGGATGTACTGATATTTGTTTGAAGGTTGGTGGGGCAGAAGCCTCTGATGCTAGTATTGGCAGTGGTTACACGCAACATCCTACCGAGCTTAATGAACATGAAGATGCAGCCCAGGTAATTGAGTCAATCAGGAGAGATGAATTTGGTCTTGATTCAGGCCTATCAAGTGTTGAAAGTATCATGTTAAAGAAGCAGCATGCTCGCTTAGGGAGAGCTCTTCATTGTCTTTCACAGGAATTGTATTCACAGGATTCACATTTTCTTCTTGAGCTGGTTCAAAATGCTGATGATAATACCTACCCAACAAATGTAGAACCAACTCTAACATTCATTCTTCAAGAGTCAGGTATTATTGTTTTAAATAATGAGCGAGGCTTCTCTTCCCGGAACATTAGAGCACTTTGTGATGTTGGAAGTTCAACCAAGAAAGGATCTAATGCTGGATATATAGGGCAGAAGGGCATTGGTTTCAAATCAGTTTTTCGGGTCACAGATGCTCCAGAAATTCATTCCAATGGGTTTCACATCAAGTTTGATATAAGTGAGGGTCAGATTGGTTTTGTTTTGCCAACAGTTGTACCTCCCTGCAATGTGGACTTGTTTAGTAGGCTTACTTCTAGTGACCATGATCAATCAGATAATAACTGCTGGAACACTTGCGTTGTTCTTCCTTTCAGATCAAAAATATCAGATGGAACTGTCATGAAAAGCATTATAAATATGTTTTCAGATCTTCATCCATCTTTATTACTCTTTCTGCACCGCCTCCAGTGTATCAAGTTTAGAAACTTGCTTGATGATTCACTTACTGTCATGAGAAAAGAAATTTTGGGAGATGGTATTGTTAAAGTTTCACATGGGAAAGAGAAAATGACATGGTTTGTAGTATCTCAGAAATTGCAAGCAGATTTTATTCGTAGTGATGTACAAACAACAGAAATTTCAATAGCGTTTACATTGAAGGAATCAGATAACGGTGATTATGATCCAGATCTTGTCCAGCAGCCTGTTTTTGCATTTCTTCCTCTTAGAACATATGGACTGAAATTTATTCTTCAGGGTGATTTTGTCCTTCCTTCATCTAGAGAGGAAGTGGATGGAGATAGTCCCTGGAACCAGTGGCTGTTGTCAGAATTTCCTGGTTTATTTGTCAATGCGGAGAGATCTTTTTGTGCTCTTCCGTGCTTTAAAGAGAATCCCGGGAGAGCTGTGACAGCTTATATGTCCTTTGTTCCCCTTGTAGGTGAAGTGCATGGTTTCTTTTCTTCTCTTCCACGGTTGATTGTTTCTAGATTACGTATGACAAATTGCTTACTTCTGGAAGGAGGAAATAATGAATGGGTTCCTCCTTGCAAGGTCCTAAGAGGTTGGAATGAACATGCTCATTCGCTTCTTCCTGACAGTTTACTACGGGAGCATCTTGACCTTGGATTCTTGGATAGAAATATAGTTCTGCCAGATCCACTTTCAAATGCAATTGGTATTGTGGAGTATGGACCCAAAGTTCTGCTTCAAGTTATGGTATCTTTATGTCATACACAAAATGGTCTCAAATCAATGGGGTTGGGTTGGCTGGCCTCTTGGCTAAGTGAACTTTATGCCATGTCATTCAATTTTTCTGTGGAAGCTTCTTTTGATCCGAGAATACAAATGGAGCTTATAGAAAACCTTCGAAAAATTCCTTTCATTCCTCTTTCAGATGGTACATATGGTGCAGTAGACGAAGGCCCAATTTGGTTACATTTTGATGCCTTAAGCAATGGCCTTGAGGCTCAGGATGGACTTGAGTCTTTCCCAAATTTATATGCGAAACTTCGGATCGTAAGTCCTGCCCTCATTTCTACAGTGTCTGCAGATATGTCATCCATGGATGTGACAGTTGACAAACTCACATGTATGCTCTGTAGAATTGGTGTCCAGAGGTTGTCTGCACACGAAATTGTCAAGGTACACATCTTGCCAGCTATATCTGATGACAGAATTACAGATTGGGATAAGAATTTGGTGATTGAATATCTCTGCTTTGTAATGTTCCATATACAGTCGAGCTGCTCTGATTGCAATGTTGAAAGGGAATACATAATCTCAGAAATACGAGATAAAGCTTACATATCAACAAATTATGGCTTTAAGCGGCCTTCTGAGGTATCAATTCATTTCAGTAAAGAATTTGGAAATCCTGTGGACATAAAGAAGTTGATTAATATGGTGGATATAAAGTGGCATGAGGTTGACATCTCCTATTTGGGACATCCGGTCACAAAACCACTCCCATGTGAACTGAAGAAGTGGAGGGAATTTTTCCAGCAAATTGGGATAATGGATTTTGTCAAAGTAGTGCAAGTTGAGAAGGGAATTGCTGATATTTCTGATGTACTAGTTAAGAATGTGATTTGGGATAAGGACTTAATTTCCCTTCGATCAAATGTCACAGATTGGGAGTCCCCTGAATTGGTCAACTTATTATCTCTGTTGGCCAGAGATGGAAACAAAAAAGGTTGTGAATATCTCTTAGAGATTCTTGATACTTTATGGGATGATTGCTATGGTGAAAAAACTACATGTTATTGTGCTTCTAAATCTGAAACAGACAGAAGGCCCTTCAAATCTTCATTTATAAGTAGCATCTGTGATGTGGAATGGGTGGTATCAACGATGGATGATGTACTGCACTATCCTAAAGATTTATATCATGATTGTGATGCAGTGCACTCGATTCTGGGGGCATCTGCTCCATTTGCTATGCCAAAGGTTAGAAGTGAGAAGTTTGTACTTGATATTGGGTTTAAGACAACAGTTTCCCTTGATGATGTTCTGGAGGTCTTGAAGCTATGGAGACGTGAGAACCCGTTCAGTGCCAGCCTAGCACAAATGTTCAAATTTTACACATTAATCTGGAATGAAATGGCTGCTTCAAAGGAGAAAATTGCAGAGGCTTTCCATTCAGGACCTTCTATCTTTGTTCCACACACATCTAGCTTCAGGCATGAGGATGTGGTATCTGGTACATTGTTGTCCCCTGAAGAAGTGTATTGGCATGACTCCACTTCCTTTGTAGACCAAATCAGGGAGATTCATCGTCAGTGCAGCTCAGCAGGTGTTACTCATGGCCCCTTGAATAAGACGCTTTGCAATTTCTACCCAGGCCTTCATGACTTCTTTGTTGACGGCTGTGGAGTACATGAGACCCCTCCTCTCCGGAGCTACCTTCAGATATTGCTGCATTTGTCAAATGTTGCTTTGCCTTCACAAGCAGCTAATGCAGTTTTTCAAGTTTTCCTGAAGTGGACTGATGGACTAAAATCAGGATTGAGTGCTGAAGATGTTGTTTACTTGAAAGATTCGCTTACAAAGATTGAGTGTACGGTGCTTCCTACTGTACAGGATAAGTGGGTTTCTGTACATCCTTCCTTTGGTCTTGTGTGCTGGTGTGATAATAAGAAATTAAGCAAGCAGTTTAAGCACTTGGACTGCATTGATTTTCTGTACTTCGGTGAACTGAGCAAGGATGATGAAGAGATGCTATGTACAAAAGTGTCCATCCTCATGCACACTTTAGGGATTCCTGCTCTTTCAGAGGTTGTAACCCGTGAGGCAATATATTACAGTATGGAAGACTCTAGCTTTAAAGCTGCATTGCTGGATTGGGCTCTTCCATACGCACAGCGCTACTTACATGGTGTACACCCAGATAAATATTCTCAACTCAAGCAGTCTGAATTTGATATCCTGAATCACCTGCAAGTAGTAGTTGTTGAAAAGCTGTTCTATCGGAATGTTATAAAGAGTACTGGAAATGAATCCAAGAAGCGAGTTAAATGTAGTTGTCTTCTGACGGGTAGCATTTTGTATACAACACAAGAGTCAGATTCTCACGCATTATTTATGGAGCTTTCTCGTTTGTTTTTTAATGGAAATCCTGAACTACACTTGGCAAATTTCCTTCATATGATCACAACCATGGCAGAGTCAGGTTCAACTGAGGAGCAGACCGAGTTTTTCATCTTAAATAGCCAAAATGTGCCAAAGCTTCCTGATGGAGAATCTGTTTGGTGCCTTTCTTCTGTGCATTCATTGATAGAAAGTGATAAATCACTTGAAACAAGTTTCAATTCACCAGAAGTAGATGAGCAAAACAGTTGGAAATCCAAAAGTAAAGCACGGAACTGGCCTCCTGTTGATTGGAAAATTGCACCAGGGTTTGGGTATGCGCGTGCCAATGGTTTTAAGACACAGGCAGTTTCACAGCCCAACACCGCCTTAGAAAATAAAGTGGGGGATGATTCTGAAGGTATCAGTAGGCAAACAGATGATTTAACACCTATTTCAGTTGACAGTAATTGGACCATTGAAGGTTGTTTGGCAACAACATCTGCGGCTTTTGTTTTGCCAGACTCGAATCATCTGCAAGAACATTGTGGTGAGGCTGGCAATGAGGCTGACTTTCCAATGCATATGGAGTGTAATCCTGTTAGTTTTGATCTTGTGTCTGACCCATCTGACTTTGGCTCATCTAATTTTAGCAAGAGAGATCAGCTTAGATTTGGTACACCCAATTCAACACAAGCAAATTTAACTGGGAGGCTAGGTGAGCTTGTTGCTTTTAAATACTTTGTTCAGAAAGCCGGCAAATCAGTTGTGAAGTGGGTCAATGAGCATCACGAAACTGGGCTACCGTATGACATAGTTATAGGGGACAAGGAAAACAATAAAGAGTTCATTGAAGTTAAAGCAACCAAGTCAGCAAGAAAAGACTGGTTCGAAATATCAATGAGAGAGTTGCAATTTGCGATTGAGAAAGCTGAAGCTTTCAGCATTGCGCATGTCATTCTATTGGGTAATAACGTTGCAAGAGTCTCAGTATACAACAATCTGGCAAAATTGTGCCAGCTTCACAAACTGCGGTTGGCTGTCTTGTTGCCTGAGCAGCAGAGGGAATTTTCCATCGTGTCCCAATCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

2741

Amino Acids

308.25

Weight (kDa)

5.7

Isoelectric Point (pI)

43.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 3977, 5879, 7043
AarI CACCTGC 2 cut(s) 6347, 7008
Acc16I TGCGCA 1 cut(s) 8082
Acc36I ACCTGC 3 cut(s) 2956, 6347, 7008
AccB1I GGYRCC 1 cut(s) 7314
AccB7I CCANNNNNTGG 3 cut(s) 1229, 1571, 7463
AccI GTMKAC 5 cut(s) 2002, 4980, 6318, 7112, 8124
AccII CGCG 4 cut(s) 303, 321, 975, 7474
AccIII TCCGGA 2 cut(s) 828, 6459
AclI AACGTT 2 cut(s) 952, 8106
AcoI YGGCCR 2 cut(s) 2374, 5736
AcyI GRCGYC 1 cut(s) 10
AdeI CACNNNGTG 2 cut(s) 2294, 3665
AfeI AGCGCT 1 cut(s) 6929
AflII CTTAAG 2 cut(s) 2227, 5014
AflIII ACRYGT 3 cut(s) 2695, 5153, 5822
AhdI GACNNNNNGTC 1 cut(s) 5516
AhlI ACTAGT 4 cut(s) 662, 2300, 2677, 5638
AjiI CACGTC 1 cut(s) 6101
AjnI CCWGG 8 cut(s) 214, 836, 1448, 3372, 4370, 4399, 6403, 7456
AjuI GAANNNNNNNTTGG 2 cut(s) 5233, 5265
AloI GAACNNNNNNTCC 2 cut(s) 4749, 4781
Alw21I GWGCWC 6 cut(s) 410, 1779, 3478, 3661, 4438, 5973
Alw26I GTCTC 9 cut(s) 355, 370, 1597, 3062, 3087, 4814, 6091, 6440, 8122
Alw44I GTGCAC 1 cut(s) 5969
AlwNI CAGNNNCTG 2 cut(s) 4384, 5111
Ama87I CYCGRG 3 cut(s) 274, 287, 4460
Aor13HI TCCGGA 2 cut(s) 828, 6459
Aor51HI AGCGCT 1 cut(s) 6929
ApaI GGGCCC 1 cut(s) 590
ApaLI GTGCAC 1 cut(s) 5969
ArsI GACNNNNNNTTYG 4 cut(s) 1633, 1665, 2468, 2500
AseI ATTAAT 5 cut(s) 1568, 2799, 3105, 5463, 6152
Asp700I GAANNNNTTC 6 cut(s) 514, 2174, 2745, 4602, 4929, 6110
AspLEI GCGC 7 cut(s) 35, 305, 379, 975, 6930, 7474, 8083
AsuC2I CCSGG 4 cut(s) 251, 3646, 4461, 4462
AsuII TTCGAA 3 cut(s) 2264, 4933, 8022
AvaI CYCGRG 3 cut(s) 274, 287, 4460
AvaII GGWCC 5 cut(s) 2476, 4618, 4757, 6209, 7605
BaeGI GKGCMC 2 cut(s) 590, 5973
BaeI ACNNNNGTAYC 2 cut(s) 3822, 3855
BalI TGGCCA 2 cut(s) 2376, 5738
BamHI GGATCC 2 cut(s) 1744, 2633
BanI GGYRCC 1 cut(s) 7314
BanII GRGCYC 5 cut(s) 410, 505, 590, 3478, 6913
BarI GAAGNNNNNNTAC 2 cut(s) 3859, 3891
BbsI GAAGAC 3 cut(s) 1883, 6882, 7082
Bbv12I GWGCWC 6 cut(s) 410, 1779, 3478, 3661, 4438, 5973
BceAI ACGGC 2 cut(s) 290, 6445
BciT130I CCWGG 8 cut(s) 216, 838, 1450, 3374, 4372, 4401, 6405, 7458
BciVI GTATCC 2 cut(s) 694, 1572
BclI TGATCA 2 cut(s) 3889, 7212
BcnI CCSGG 4 cut(s) 251, 3646, 4461, 4462
BcoDI GTCTC 9 cut(s) 355, 370, 1597, 3062, 3087, 4814, 6091, 6440, 8122
BcuI ACTAGT 4 cut(s) 662, 2300, 2677, 5638
BfmI CTRYAG 8 cut(s) 927, 1502, 2310, 2860, 2949, 5103, 5112, 5164
BfoI RGCGCY 1 cut(s) 6931
BfrI CTTAAG 2 cut(s) 2227, 5014
BfuAI ACCTGC 3 cut(s) 2956, 6347, 7008
BfuI GTATCC 2 cut(s) 694, 1572
BglII AGATCT 3 cut(s) 3991, 4252, 4424
BlpI GCTNAGC 1 cut(s) 6352
BmcAI AGTACT 2 cut(s) 1720, 7051
Bme18I GGWCC 5 cut(s) 2476, 4618, 4757, 6209, 7605
BmeRI GACNNNNNGTC 1 cut(s) 5516
BmeT110I CYCGRG 3 cut(s) 274, 287, 4460
BmgBI CACGTC 1 cut(s) 6101
BmiI GGNNCC 9 cut(s) 588, 1746, 2477, 2635, 4376, 4605, 4759, 6373, 7316
BmrI ACTGGG 2 cut(s) 7848, 7938
BmuI ACTGGG 2 cut(s) 7848, 7938
BoxI GACNNNNGTC 1 cut(s) 5047
BpiI GAAGAC 3 cut(s) 1883, 6882, 7082
BplI GAGNNNNNCTC 4 cut(s) 270, 302, 335, 367
BpmI CTGGAG 9 cut(s) 360, 424, 1206, 1487, 1892, 2060, 3744, 4013, 6098
Bpu10I CCTNAGC 4 cut(s) 2165, 3466, 5034, 8184
Bpu1102I GCTNAGC 1 cut(s) 6352
Bpu14I TTCGAA 3 cut(s) 2264, 4933, 8022
BpuMI CCSGG 4 cut(s) 251, 3646, 4461, 4462
BsaAI YACGTR 1 cut(s) 4559
BsaBI GATNNNNATC 4 cut(s) 3996, 4245, 4251, 5949
BsaHI GRCGYC 1 cut(s) 10
BsaI GGTCTC 3 cut(s) 370, 4814, 6440
BsaWI WCCGGW 3 cut(s) 828, 5515, 6459
BsaXI ACNNNNNCTCC 8 cut(s) 333, 363, 3742, 3772, 7293, 7323, 7834, 7864
Bse118I RCCGGY 1 cut(s) 7886
Bse3DI GCAATG 6 cut(s) 3856, 5026, 5329, 6896, 7699, 8076
Bse8I GATNNNNATC 4 cut(s) 3996, 4245, 4251, 5949
BseAI TCCGGA 2 cut(s) 828, 6459
BseBI CCWGG 8 cut(s) 216, 838, 1450, 3374, 4372, 4401, 6405, 7458
BseJI GATNNNNATC 4 cut(s) 3996, 4245, 4251, 5949
BseMI GCAATG 6 cut(s) 3856, 5026, 5329, 6896, 7699, 8076
BseRI GAGGAG 5 cut(s) 13, 219, 1207, 6444, 7259
BseSI GKGCMC 2 cut(s) 590, 5973
BseYI CCCAGC 1 cut(s) 577
BsgI GTGCAG 6 cut(s) 2607, 4004, 4995, 5175, 5915, 6367
Bsh1236I CGCG 4 cut(s) 303, 321, 975, 7474
Bsh1285I CGRYCG 1 cut(s) 301
BshNI GGYRCC 1 cut(s) 7314
BsiEI CGRYCG 1 cut(s) 301
BsiHKAI GWGCWC 6 cut(s) 410, 1779, 3478, 3661, 4438, 5973
BsiHKCI CYCGRG 3 cut(s) 274, 287, 4460
BsiSI CCGG 8 cut(s) 27, 251, 829, 3646, 4461, 5516, 6460, 7887
BsmAI GTCTC 9 cut(s) 355, 370, 1597, 3062, 3087, 4814, 6091, 6440, 8122
BsmBI CGTCTC 3 cut(s) 355, 3062, 6091
BsmI GAATGC 2 cut(s) 3041, 7330
Bso31I GGTCTC 3 cut(s) 370, 4814, 6440
BsoBI CYCGRG 3 cut(s) 274, 287, 4460
Bsp119I TTCGAA 3 cut(s) 2264, 4933, 8022
Bsp120I GGGCCC 1 cut(s) 586
Bsp1286I GDGCHC 9 cut(s) 410, 505, 590, 1779, 3478, 3661, 4438, 5973, 6913
Bsp13I TCCGGA 2 cut(s) 828, 6459
Bsp1407I TGTACA 5 cut(s) 4186, 6640, 6661, 6788, 6943
Bsp1720I GCTNAGC 1 cut(s) 6352
Bsp19I CCATGG 3 cut(s) 2513, 5127, 7221
Bsp68I TCGCGA 1 cut(s) 321
BspEI TCCGGA 2 cut(s) 828, 6459
BspFNI CGCG 4 cut(s) 303, 321, 975, 7474
BspHI TCATGA 5 cut(s) 3067, 3963, 4074, 5953, 6412
BspLI GGNNCC 9 cut(s) 588, 1746, 2477, 2635, 4376, 4605, 4759, 6373, 7316
BspMAI CTGCAG 4 cut(s) 931, 1506, 2953, 5116
BspMI ACCTGC 3 cut(s) 2956, 6347, 7008
BspQI GCTCTTC 4 cut(s) 567, 3483, 4443, 6918
BspT104I TTCGAA 3 cut(s) 2264, 4933, 8022
BspT107I GGYRCC 1 cut(s) 7314
BspTI CTTAAG 2 cut(s) 2227, 5014
BspTNI GGTCTC 3 cut(s) 370, 4814, 6440
BsrDI GCAATG 6 cut(s) 3856, 5026, 5329, 6896, 7699, 8076
BsrFI RCCGGY 1 cut(s) 7886
BsrGI TGTACA 5 cut(s) 4186, 6640, 6661, 6788, 6943
BssAI RCCGGY 1 cut(s) 7886
BssNAI GTATAC 2 cut(s) 7113, 8125
BssNI GRCGYC 1 cut(s) 10
BssT1I CCWWGG 6 cut(s) 1957, 2409, 2513, 4687, 5127, 7221
Bst1107I GTATAC 2 cut(s) 7113, 8125
Bst2UI CCWGG 8 cut(s) 216, 838, 1450, 3374, 4372, 4401, 6405, 7458
BstACI GRCGYC 1 cut(s) 10
BstAFI CTTAAG 2 cut(s) 2227, 5014
BstAPI GCANNNNNTGC 2 cut(s) 433, 6521
BstAUI TGTACA 5 cut(s) 4186, 6640, 6661, 6788, 6943
BstBAI YACGTR 1 cut(s) 4559
BstBI TTCGAA 3 cut(s) 2264, 4933, 8022
BstDSI CCRYGG 6 cut(s) 306, 2513, 2601, 4535, 5127, 7221
BstFNI CGCG 4 cut(s) 303, 321, 975, 7474
BstH2I RGCGCY 1 cut(s) 6931
BstHHI GCGC 7 cut(s) 35, 305, 379, 975, 6930, 7474, 8083
BstMAI GTCTC 9 cut(s) 355, 370, 1597, 3062, 3087, 4814, 6091, 6440, 8122
BstMCI CGRYCG 1 cut(s) 301
BstNI CCWGG 8 cut(s) 216, 838, 1450, 3374, 4372, 4401, 6405, 7458
BstPAI GACNNNNGTC 1 cut(s) 5047
BstSFI CTRYAG 8 cut(s) 927, 1502, 2310, 2860, 2949, 5103, 5112, 5164
BstSLI GKGCMC 2 cut(s) 590, 5973
BstSNI TACGTA 1 cut(s) 4559
BstUI CGCG 4 cut(s) 303, 321, 975, 7474
BstV2I GAAGAC 3 cut(s) 1883, 6882, 7082
BstX2I RGATCY 7 cut(s) 1744, 2633, 3692, 3991, 4252, 4424, 4720
BstXI CCANNNNNNTGG 3 cut(s) 215, 1646, 5573
BstYI RGATCY 7 cut(s) 1744, 2633, 3692, 3991, 4252, 4424, 4720
BstZ17I GTATAC 2 cut(s) 7113, 8125
BsuI GTATCC 2 cut(s) 694, 1572
BtgI CCRYGG 6 cut(s) 306, 2513, 2601, 4535, 5127, 7221
BtrI CACGTC 1 cut(s) 6101
BtsI GCAGTG 3 cut(s) 2658, 3328, 5973
BtuMI TCGCGA 1 cut(s) 321
BveI ACCTGC 3 cut(s) 2956, 6347, 7008
CaiI CAGNNNCTG 2 cut(s) 4384, 5111
CciI TCATGA 5 cut(s) 3067, 3963, 4074, 5953, 6412
CfoI GCGC 7 cut(s) 35, 305, 379, 975, 6930, 7474, 8083
Cfr10I RCCGGY 1 cut(s) 7886
Cfr9I CCCGGG 1 cut(s) 4460
CseI GACGC 2 cut(s) 18, 6394
CspCI CAANNNNNGTGG 2 cut(s) 6295, 6330
DraI TTTAAA 7 cut(s) 1951, 2112, 2457, 3621, 4450, 6889, 7867
DraIII CACNNNGTG 2 cut(s) 2294, 3665
DriI GACNNNNNGTC 1 cut(s) 5516
EaeI YGGCCR 2 cut(s) 2374, 5736
Eam1105I GACNNNNNGTC 1 cut(s) 5516
EciI GGCGGA 1 cut(s) 3276
Ecl136II GAGCTC 2 cut(s) 408, 3476
Eco105I TACGTA 1 cut(s) 4559
Eco130I CCWWGG 6 cut(s) 1957, 2409, 2513, 4687, 5127, 7221
Eco147I AGGCCT 2 cut(s) 3420, 6408
Eco24I GRGCYC 5 cut(s) 410, 505, 590, 3478, 6913
Eco31I GGTCTC 3 cut(s) 370, 4814, 6440
Eco32I GATATC 1 cut(s) 6988
Eco47I GGWCC 5 cut(s) 2476, 4618, 4757, 6209, 7605
Eco47III AGCGCT 1 cut(s) 6929
Eco53kI GAGCTC 2 cut(s) 408, 3476
Eco88I CYCGRG 3 cut(s) 274, 287, 4460
EcoICRI GAGCTC 2 cut(s) 408, 3476
EcoO109I RGGNCCY 5 cut(s) 587, 2476, 4618, 5859, 6209
EcoRI GAATTC 2 cut(s) 795, 2791
EcoRII CCWGG 8 cut(s) 214, 836, 1448, 3372, 4370, 4399, 6403, 7456
EcoRV GATATC 1 cut(s) 6988
EcoT14I CCWWGG 6 cut(s) 1957, 2409, 2513, 4687, 5127, 7221
EcoT22I ATGCAT 6 cut(s) 481, 618, 816, 2737, 3121, 7716
EcoT38I GRGCYC 5 cut(s) 410, 505, 590, 3478, 6913
ErhI CCWWGG 6 cut(s) 1957, 2409, 2513, 4687, 5127, 7221
Esp3I CGTCTC 3 cut(s) 355, 3062, 6091
FauNDI CATATG 4 cut(s) 4297, 4969, 7209, 7716
FbaI TGATCA 2 cut(s) 3889, 7212
FblI GTMKAC 5 cut(s) 2002, 4980, 6318, 7112, 8124
FriOI GRGCYC 5 cut(s) 410, 505, 590, 3478, 6913
FspI TGCGCA 1 cut(s) 8082
GlaI GCGC 7 cut(s) 34, 304, 378, 974, 6929, 7473, 8082
GsaI CCCAGC 1 cut(s) 581
GsuI CTGGAG 9 cut(s) 360, 424, 1206, 1487, 1892, 2060, 3744, 4013, 6098
HaeII RGCGCY 1 cut(s) 6931
HapII CCGG 8 cut(s) 27, 251, 829, 3646, 4461, 5516, 6460, 7887
HgaI GACGC 2 cut(s) 18, 6394
HhaI GCGC 7 cut(s) 35, 305, 379, 975, 6930, 7474, 8083
Hin1I GRCGYC 1 cut(s) 10
Hin6I GCGC 7 cut(s) 33, 303, 377, 973, 6928, 7472, 8081
HinP1I GCGC 7 cut(s) 33, 303, 377, 973, 6928, 7472, 8081
HincII GTYRAC 7 cut(s) 1120, 2533, 5143, 5494, 5719, 6427, 7594
HindII GTYRAC 7 cut(s) 1120, 2533, 5143, 5494, 5719, 6427, 7594
HindIII AAGCTT 6 cut(s) 1898, 2106, 4887, 5364, 7289, 8067
HpaI GTTAAC 1 cut(s) 1120
HpaII CCGG 8 cut(s) 27, 251, 829, 3646, 4461, 5516, 6460, 7887
Hpy99I CGWCG 2 cut(s) 103, 326
HpyCH4IV ACGT 7 cut(s) 348, 952, 1765, 3055, 4558, 6100, 8106
HpySE526I ACGT 7 cut(s) 348, 952, 1765, 3055, 4558, 6100, 8106
Hsp92I GRCGYC 1 cut(s) 10
HspAI GCGC 7 cut(s) 33, 303, 377, 973, 6928, 7472, 8081
Kpn2I TCCGGA 2 cut(s) 828, 6459
KroI GCCGGC 1 cut(s) 7886
KroNI GCCGGC 1 cut(s) 7888
Ksp22I TGATCA 2 cut(s) 3889, 7212
KspAI GTTAAC 1 cut(s) 1120
LguI GCTCTTC 4 cut(s) 567, 3483, 4443, 6918
MaeII ACGT 7 cut(s) 348, 952, 1765, 3055, 4558, 6100, 8106
MfeI CAATTG 4 cut(s) 1413, 1906, 2418, 4737
MflI RGATCY 7 cut(s) 1744, 2633, 3692, 3991, 4252, 4424, 4720
MhlI GDGCHC 9 cut(s) 410, 505, 590, 1779, 3478, 3661, 4438, 5973, 6913
MlsI TGGCCA 2 cut(s) 2376, 5738
MluNI TGGCCA 2 cut(s) 2376, 5738
MmeI TCCRAC 3 cut(s) 3652, 4610, 7382
Mox20I TGGCCA 2 cut(s) 2376, 5738
Mph1103I ATGCAT 6 cut(s) 481, 618, 816, 2737, 3121, 7716
MroI TCCGGA 2 cut(s) 828, 6459
MroNI GCCGGC 1 cut(s) 7886
MroXI GAANNNNTTC 6 cut(s) 514, 2174, 2745, 4602, 4929, 6110
MscI TGGCCA 2 cut(s) 2376, 5738
Msp20I TGGCCA 2 cut(s) 2376, 5738
MspA1I CMGCKG 2 cut(s) 335, 3023
MspCI CTTAAG 2 cut(s) 2227, 5014
MspI CCGG 8 cut(s) 27, 251, 829, 3646, 4461, 5516, 6460, 7887
MunI CAATTG 4 cut(s) 1413, 1906, 2418, 4737
Mva1269I GAATGC 2 cut(s) 3041, 7330
MvaI CCWGG 8 cut(s) 216, 838, 1450, 3374, 4372, 4401, 6405, 7458
MvnI CGCG 4 cut(s) 303, 321, 975, 7474
NaeI GCCGGC 1 cut(s) 7888
NciI CCSGG 4 cut(s) 251, 3646, 4461, 4462
NcoI CCATGG 3 cut(s) 2513, 5127, 7221
NdeI CATATG 4 cut(s) 4297, 4969, 7209, 7716
NgoMIV GCCGGC 1 cut(s) 7886
NlaIV GGNNCC 9 cut(s) 588, 1746, 2477, 2635, 4376, 4605, 4759, 6373, 7316
NmeAIII GCCGAG 1 cut(s) 332
NmuCI GTSAC 8 cut(s) 2036, 2557, 3748, 3881, 4471, 5134, 5518, 5689
NruI TCGCGA 1 cut(s) 321
NsbI TGCGCA 1 cut(s) 8082
NsiI ATGCAT 6 cut(s) 481, 618, 816, 2737, 3121, 7716
NspV TTCGAA 3 cut(s) 2264, 4933, 8022
PaeI GCATGC 2 cut(s) 2074, 3461
PaeR7I CTCGAG 2 cut(s) 274, 287
PagI TCATGA 5 cut(s) 3067, 3963, 4074, 5953, 6412
PaqCI CACCTGC 2 cut(s) 6347, 7008
PceI AGGCCT 2 cut(s) 3420, 6408
PciI ACATGT 3 cut(s) 2695, 5153, 5822
PciSI GCTCTTC 4 cut(s) 567, 3483, 4443, 6918
PcsI WCGNNNNNNNCGW 2 cut(s) 294, 303
PctI GAATGC 2 cut(s) 3041, 7330
PdiI GCCGGC 1 cut(s) 7888
PdmI GAANNNNTTC 6 cut(s) 514, 2174, 2745, 4602, 4929, 6110
PflMI CCANNNNNTGG 3 cut(s) 1229, 1571, 7463
PfoI TCCNGGA 1 cut(s) 3644
Ppu21I YACGTR 1 cut(s) 4559
PpuMI RGGWCCY 3 cut(s) 2476, 4618, 6209
PscI ACATGT 3 cut(s) 2695, 5153, 5822
PshAI GACNNNNGTC 1 cut(s) 5047
PshBI ATTAAT 5 cut(s) 1568, 2799, 3105, 5463, 6152
PsiI TTATAA 3 cut(s) 3977, 5879, 7043
Psp124BI GAGCTC 2 cut(s) 410, 3478
Psp1406I AACGTT 2 cut(s) 952, 8106
Psp5II RGGWCCY 3 cut(s) 2476, 4618, 6209
Psp6I CCWGG 8 cut(s) 214, 836, 1448, 3372, 4370, 4399, 6403, 7456
PspFI CCCAGC 1 cut(s) 577
PspGI CCWGG 8 cut(s) 214, 836, 1448, 3372, 4370, 4399, 6403, 7456
PspN4I GGNNCC 9 cut(s) 588, 1746, 2477, 2635, 4376, 4605, 4759, 6373, 7316
PspOMI GGGCCC 1 cut(s) 586
PspPPI RGGWCCY 3 cut(s) 2476, 4618, 6209
PstI CTGCAG 4 cut(s) 931, 1506, 2953, 5116
PstNI CAGNNNCTG 2 cut(s) 4384, 5111
PsuI RGATCY 7 cut(s) 1744, 2633, 3692, 3991, 4252, 4424, 4720
PvuII CAGCTG 1 cut(s) 3023
RruI TCGCGA 1 cut(s) 321
SacI GAGCTC 2 cut(s) 410, 3478
SapI GCTCTTC 4 cut(s) 567, 3483, 4443, 6918
ScaI AGTACT 2 cut(s) 1720, 7051
SduI GDGCHC 9 cut(s) 410, 505, 590, 1779, 3478, 3661, 4438, 5973, 6913
SfcI CTRYAG 8 cut(s) 927, 1502, 2310, 2860, 2949, 5103, 5112, 5164
Sfr274I CTCGAG 2 cut(s) 274, 287
SfuI TTCGAA 3 cut(s) 2264, 4933, 8022
SinI GGWCC 5 cut(s) 2476, 4618, 4757, 6209, 7605
SlaI CTCGAG 2 cut(s) 274, 287
SmaI CCCGGG 1 cut(s) 4462
SmiI ATTTAAAT 2 cut(s) 1951, 2457
SnaBI TACGTA 1 cut(s) 4559
SpeI ACTAGT 4 cut(s) 662, 2300, 2677, 5638
SphI GCATGC 2 cut(s) 2074, 3461
SseBI AGGCCT 2 cut(s) 3420, 6408
SspI AATATT 3 cut(s) 737, 2896, 6959
SstI GAGCTC 2 cut(s) 410, 3478
StuI AGGCCT 2 cut(s) 3420, 6408
StyI CCWWGG 6 cut(s) 1957, 2409, 2513, 4687, 5127, 7221
SwaI ATTTAAAT 2 cut(s) 1951, 2457
TaiI ACGT 7 cut(s) 351, 955, 1768, 3058, 4561, 6103, 8109
TaqII GACCGA 3 cut(s) 1167, 2347, 7268
TauI GCSGC 6 cut(s) 33, 49, 52, 335, 5398, 7640
TseFI GTSAC 8 cut(s) 2036, 2557, 3748, 3881, 4471, 5134, 5518, 5689
Tsp45I GTSAC 8 cut(s) 2036, 2557, 3748, 3881, 4471, 5134, 5518, 5689
TspGWI ACGGA 4 cut(s) 21, 3226, 4431, 7438
TspMI CCCGGG 1 cut(s) 4460
Van91I CCANNNNNTGG 3 cut(s) 1229, 1571, 7463
Vha464I CTTAAG 2 cut(s) 2227, 5014
VneI GTGCAC 1 cut(s) 5969
VpaK11BI GGWCC 5 cut(s) 2476, 4618, 4757, 6209, 7605
VspI ATTAAT 5 cut(s) 1568, 2799, 3105, 5463, 6152
XbaI TCTAGA 4 cut(s) 844, 2761, 4343, 4550
XcmI CCANNNNNNNNNTGG 1 cut(s) 494
XhoI CTCGAG 2 cut(s) 274, 287
XmaI CCCGGG 1 cut(s) 4460
XmiI GTMKAC 5 cut(s) 2002, 4980, 6318, 7112, 8124
XmnI GAANNNNTTC 6 cut(s) 514, 2174, 2745, 4602, 4929, 6110
ZrmI AGTACT 2 cut(s) 1720, 7051
Zsp2I ATGCAT 6 cut(s) 481, 618, 816, 2737, 3121, 7716
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.