Prupe.1G159100_v2.0.a1

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000582
Physical Location & Seq
Reverse (-)
12619103 .. 12626111
7009 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G159100.1

Sequence Viewer

Length: 1902 bp
ATGTTCGGGCACCCTCATCACTTCCGATCCCCATCTGGCGGGCCACGTCAGCAACCGCCTCCACTTCAGCATCCATACCCACAGCCTCTAAACCCCAATTTCTCCCTCCAAAACCCGACCAATTCATCATATATTTTGCCTCCAAACCCTGCTTTTCCATCCCATCCTGTCCTCAATCCCTACCCAGCTTTCCCAACCCAAAACCCTAATTTCACTCCCCAACAGCTCCCCAACTCTTCGTTTCGGCCTCAGACCTTACCTGAGAACCCGAGACCGAATGTCGATCCCCAACAGCTCTCGAATTCAGCTTTTTCGCCGCAGAGCTTGTCTGATAACCCGAATGTCGGTCCTCTCCAGCACCCCTCGAATTCAGCGTTTTGGCCAAAGGAGATGCTGGAGAGGATCGACGGCGCCGCGGAAAAGGCTCGCGCTGAACTCGTCGCGGCTGGAAGGAGCGTCTCTGCGTGGAAGGTCTTGGAGTCTGCGCTTCTGATGCTCAAGGTTGATGCTTGGAGCTCTCTGATGCTTCCAATGTACCAAGTGCCGTCTCTTCACCGCCTAATGCTCACTGAAGGCAGGATAAATGCATATATCCATTGCTTTGTTGGGGTTCGAAAAATTACTTCATTGTATGATTTGGAACTAGCAATCTGCAAGAATGAGAATATTCAGCAGTTTGAAGAGCTGGGATTAGGCCCTTTGTTGCTGCACCCACTTGTTTTGCATTATTTCCAAGTGAGTTCTGATACAACTGAAGTGTTTAAGATAACTAGTGAGGAAATAGTATTTTTACTCATTGGATTTCAAACACATAAACGTGAAGTTACGGACGATTCTGTTGAAGAATTTTTGGATTTTATTGTTAAGAAGCGATCAGTTGCAAGCAAAGAAAAGCTCGGAATTCGAATTTGTAGCTTGGGGGTGCATGTTTCTTACATCCTTGAAGCCAAGAAGTTAGAACGTGCTGCTCTAAGGAAATCCAAAAAGGAATTAAGAGTGTGGCGCTCTAGGAAGAAGCCACCAATTTTCTCCACATTGAAAAAGCGGCTAGATAAACATTTTTGTGCCATTTCTCAGCAAGCTGAATTGTTTTCTGTTGTGCACAAGGATTTTTGTGTTAAGCAAGATAGGTTTGTTCCTTCGAGCTCAAAGCATGGAGGTAATAGGGATTATTCACATGAAGAAGATGACAAAAATAATGATGATGCTATAAGCAGTCAGGTTAACTTTTCATCACAATCTGCTAAAATCTCTGAAAGAGCGAGTAGCTGTACTAACTTGTCAGCAATAGAAGAGAGGTGTTGGCTCGAATCGACCCACATTTCTCCAGTTAGTGGAAGCCAAAAGCATAATGAGGGTAATGGATCTGTTAAAAAAAAAAGAAAATATGGAAATCTAAGCAGCCCCATCTCTGTGCCCATAAAATTGCGTAAGAGTGACAAGGTAGATCAAGATGTTCTTCCTACAAAGAATGGCTGTGGAACAGAGGAGTTTAGTGATGTGCATATAATTGATCTTTCAATTACCGATACTCTTTTGAGGATGTTCGTTACAACTTGGAAGGAAGCATGTCAGGAGCAGCCTGTGGCTAAGGTACTTTGGAGCATGCTTCGGTCTTATAATACACATTATAAGAAGTCAAAAACAATCATGTCAATGTTTTATTCATACCCATTGATTGGACTGCTGAATGTTGCTAATTATTCGAAACAGGTCTCATCTATCAAATTTGGAATGTGGGATAGCATGTACGATACATTCCAATCCATTGGCCAACACTGGTTAACTAACACTTGTACTCATAAGTGTTCTGAGTATTTGAGCACAGATGTAGAACCAAGTATTAAGGATGCAGTACGAGTCAGTACAGAACACAATACTGAGCATACACTGAGTGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

634

Amino Acids

71.65

Weight (kDa)

8.73

Isoelectric Point (pI)

53.35

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1620, 1632
AccB1I GGYRCC 2 cut(s) 9, 410
AccB7I CCANNNNNTGG 2 cut(s) 1334, 1679
AccII CGCG 3 cut(s) 416, 429, 443
AciI CCGC 8 cut(s) 39, 56, 317, 414, 416, 443, 556, 1045
AclWI GGATC 4 cut(s) 21, 278, 410, 1372
AcoI YGGCCR 2 cut(s) 380, 1771
AcsI RAATTY 6 cut(s) 301, 367, 845, 900, 906, 1727
AcuI CTGAAG 3 cut(s) 50, 591, 774
AcyI GRCGYC 1 cut(s) 411
AdeI CACNNNGTG 1 cut(s) 1895
AfaI GTAC 7 cut(s) 536, 1273, 1596, 1751, 1798, 1857, 1867
AfiI CCNNNNNNNGG 4 cut(s) 38, 344, 1334, 1679
AgsI TTSAA 6 cut(s) 680, 806, 842, 944, 1039, 1521
AhdI GACNNNNNGTC 1 cut(s) 278
AhlI ACTAGT 1 cut(s) 770
AjiI CACGTC 1 cut(s) 47
Alw21I GWGCWC 4 cut(s) 518, 1104, 1148, 1826
Alw26I GTCTC 4 cut(s) 265, 463, 552, 1720
Alw44I GTGCAC 1 cut(s) 1100
AlwI GGATC 4 cut(s) 21, 278, 410, 1372
Ama87I CYCGRG 1 cut(s) 268
AoxI GGCC 5 cut(s) 41, 245, 380, 694, 1771
ApaLI GTGCAC 1 cut(s) 1100
ApeKI GCWGC 4 cut(s) 706, 965, 1401, 1579
ApoI RAATTY 6 cut(s) 301, 367, 845, 900, 906, 1727
AspLEI GCGC 4 cut(s) 413, 431, 487, 1005
AspS9I GGNCC 3 cut(s) 41, 347, 695
AsuHPI GGTGA 1 cut(s) 545
AsuII TTCGAA 3 cut(s) 613, 904, 1706
AvaI CYCGRG 1 cut(s) 268
AvaII GGWCC 1 cut(s) 347
BaeGI GKGCMC 3 cut(s) 12, 1104, 1419
BalI TGGCCA 2 cut(s) 382, 1773
BanI GGYRCC 2 cut(s) 9, 410
BanII GRGCYC 2 cut(s) 518, 1148
Bbv12I GWGCWC 4 cut(s) 518, 1104, 1148, 1826
BbvI GCAGC 4 cut(s) 693, 952, 1413, 1591
BccI CCATC 4 cut(s) 40, 166, 171, 1415
BceAI ACGGC 2 cut(s) 424, 529
BcoDI GTCTC 4 cut(s) 265, 463, 552, 1720
BcuI ACTAGT 1 cut(s) 770
BfaI CTAG 4 cut(s) 644, 771, 1008, 1049
BfoI RGCGCY 2 cut(s) 414, 1006
BisI GCNGC 8 cut(s) 317, 414, 444, 707, 966, 1046, 1402, 1580
BlsI GCNGC 8 cut(s) 318, 415, 445, 708, 967, 1047, 1403, 1581
Bme18I GGWCC 1 cut(s) 347
BmeRI GACNNNNNGTC 1 cut(s) 278
BmeT110I CYCGRG 1 cut(s) 268
BmgBI CACGTC 1 cut(s) 47
BmgT120I GGNCC 3 cut(s) 41, 347, 695
BmiI GGNNCC 2 cut(s) 11, 412
BmsI GCATC 7 cut(s) 79, 381, 483, 496, 513, 1195, 1840
BpmI CTGGAG 3 cut(s) 338, 416, 1311
Bpu10I CCTNAGC 1 cut(s) 1590
Bpu14I TTCGAA 3 cut(s) 613, 904, 1706
BpuEI CTTGAG 1 cut(s) 482
BsaBI GATNNNNATC 1 cut(s) 31
BsaHI GRCGYC 1 cut(s) 411
BsaI GGTCTC 2 cut(s) 265, 1720
BsaJI CCNNGG 1 cut(s) 414
Bsc4I CCNNNNNNNGG 4 cut(s) 38, 344, 1334, 1679
Bse1I ACTGG 2 cut(s) 1328, 1784
Bse3DI GCAATG 1 cut(s) 595
Bse8I GATNNNNATC 1 cut(s) 31
BseDI CCNNGG 1 cut(s) 414
BseGI GGATG 6 cut(s) 70, 158, 163, 936, 1548, 1855
BseJI GATNNNNATC 1 cut(s) 31
BseLI CCNNNNNNNGG 4 cut(s) 38, 344, 1334, 1679
BseMI GCAATG 1 cut(s) 595
BseMII CTCAG 6 cut(s) 252, 263, 1088, 1803, 1872, 1883
BseNI ACTGG 2 cut(s) 1328, 1784
BseRI GAGGAG 1 cut(s) 1502
BseSI GKGCMC 3 cut(s) 12, 1104, 1419
BseXI GCAGC 4 cut(s) 693, 952, 1413, 1591
BseYI CCCAGC 2 cut(s) 184, 685
BsgI GTGCAG 1 cut(s) 692
Bsh1236I CGCG 3 cut(s) 416, 429, 443
BshFI GGCC 5 cut(s) 43, 247, 382, 696, 1773
BshNI GGYRCC 2 cut(s) 9, 410
BsiHKAI GWGCWC 4 cut(s) 518, 1104, 1148, 1826
BsiHKCI CYCGRG 1 cut(s) 268
BslI CCNNNNNNNGG 4 cut(s) 38, 344, 1334, 1679
BsmAI GTCTC 4 cut(s) 265, 463, 552, 1720
BsmBI CGTCTC 2 cut(s) 463, 552
BsnI GGCC 5 cut(s) 43, 247, 382, 696, 1773
Bso31I GGTCTC 2 cut(s) 265, 1720
BsoBI CYCGRG 1 cut(s) 268
Bsp119I TTCGAA 3 cut(s) 613, 904, 1706
Bsp1286I GDGCHC 6 cut(s) 12, 518, 1104, 1148, 1419, 1826
Bsp143I GATC 7 cut(s) 26, 283, 402, 872, 1364, 1447, 1513
BspACI CCGC 8 cut(s) 39, 56, 317, 414, 416, 443, 556, 1045
BspANI GGCC 5 cut(s) 43, 247, 382, 696, 1773
BspCNI CTCAG 6 cut(s) 253, 262, 1087, 1804, 1873, 1884
BspFNI CGCG 3 cut(s) 416, 429, 443
BspLI GGNNCC 2 cut(s) 11, 412
BspPI GGATC 4 cut(s) 21, 278, 410, 1372
BspQI GCTCTTC 1 cut(s) 675
BspT104I TTCGAA 3 cut(s) 613, 904, 1706
BspT107I GGYRCC 2 cut(s) 9, 410
BspTNI GGTCTC 2 cut(s) 265, 1720
BsrDI GCAATG 1 cut(s) 595
BsrI ACTGG 2 cut(s) 1328, 1784
BssECI CCNNGG 1 cut(s) 414
BssMI GATC 7 cut(s) 26, 283, 402, 872, 1364, 1447, 1513
BssNI GRCGYC 1 cut(s) 411
Bst6I CTCTTC 4 cut(s) 241, 555, 675, 1287
BstACI GRCGYC 1 cut(s) 411
BstBI TTCGAA 3 cut(s) 613, 904, 1706
BstC8I GCNNGC 5 cut(s) 41, 427, 883, 1080, 1607
BstDEI CTNAG 9 cut(s) 249, 261, 971, 1074, 1397, 1590, 1812, 1881, 1892
BstDSI CCRYGG 1 cut(s) 414
BstF5I GGATG 6 cut(s) 70, 158, 163, 936, 1548, 1855
BstFNI CGCG 3 cut(s) 416, 429, 443
BstH2I RGCGCY 2 cut(s) 414, 1006
BstHHI GCGC 4 cut(s) 413, 431, 487, 1005
BstKTI GATC 7 cut(s) 29, 286, 405, 875, 1367, 1450, 1516
BstMAI GTCTC 4 cut(s) 265, 463, 552, 1720
BstMBI GATC 7 cut(s) 26, 283, 402, 872, 1364, 1447, 1513
BstMWI GCNNNNNNNGC 3 cut(s) 49, 422, 493
BstNSI RCATGY 4 cut(s) 929, 1572, 1609, 1750
BstSLI GKGCMC 3 cut(s) 12, 1104, 1419
BstUI CGCG 3 cut(s) 416, 429, 443
BstV1I GCAGC 4 cut(s) 693, 952, 1413, 1591
BstX2I RGATCY 1 cut(s) 1364
BstXI CCANNNNNNTGG 1 cut(s) 1769
BstYI RGATCY 1 cut(s) 1364
BsuRI GGCC 5 cut(s) 43, 247, 382, 696, 1773
BtgI CCRYGG 1 cut(s) 414
BtrI CACGTC 1 cut(s) 47
BtsCI GGATG 6 cut(s) 70, 158, 163, 936, 1548, 1855
BtsIMutI CAGTG 3 cut(s) 567, 1777, 1889
Cac8I GCNNGC 5 cut(s) 41, 427, 883, 1080, 1607
CfoI GCGC 4 cut(s) 413, 431, 487, 1005
Cfr13I GGNCC 3 cut(s) 41, 347, 695
Cfr42I CCGCGG 1 cut(s) 417
CseI GACGC 1 cut(s) 445
Csp6I GTAC 7 cut(s) 535, 1272, 1595, 1750, 1797, 1856, 1866
CspCI CAANNNNNGTGG 2 cut(s) 702, 737
CviAII CATG 7 cut(s) 926, 1154, 1178, 1569, 1606, 1651, 1747
CviQI GTAC 7 cut(s) 535, 1272, 1595, 1750, 1797, 1856, 1866
DdeI CTNAG 9 cut(s) 249, 261, 971, 1074, 1397, 1590, 1812, 1881, 1892
DinI GGCGCC 1 cut(s) 412
DpnI GATC 7 cut(s) 28, 285, 404, 874, 1366, 1449, 1515
DpnII GATC 7 cut(s) 26, 283, 402, 872, 1364, 1447, 1513
DraIII CACNNNGTG 1 cut(s) 1895
DriI GACNNNNNGTC 1 cut(s) 278
EaeI YGGCCR 2 cut(s) 380, 1771
Eam1104I CTCTTC 4 cut(s) 241, 555, 675, 1287
Eam1105I GACNNNNNGTC 1 cut(s) 278
EarI CTCTTC 4 cut(s) 241, 555, 675, 1287
Ecl136II GAGCTC 2 cut(s) 516, 1146
Eco24I GRGCYC 2 cut(s) 518, 1148
Eco31I GGTCTC 2 cut(s) 265, 1720
Eco47I GGWCC 1 cut(s) 347
Eco53kI GAGCTC 2 cut(s) 516, 1146
Eco57I CTGAAG 3 cut(s) 50, 591, 774
Eco88I CYCGRG 1 cut(s) 268
EcoICRI GAGCTC 2 cut(s) 516, 1146
EcoO109I RGGNCCY 1 cut(s) 695
EcoRI GAATTC 3 cut(s) 301, 367, 900
EcoT22I ATGCAT 1 cut(s) 589
EcoT38I GRGCYC 2 cut(s) 518, 1148
EgeI GGCGCC 1 cut(s) 412
EheI GGCGCC 1 cut(s) 412
Esp3I CGTCTC 2 cut(s) 463, 552
FaeI CATG 7 cut(s) 929, 1157, 1181, 1572, 1609, 1654, 1750
FalI AAGNNNNNCTT 2 cut(s) 1443, 1475
FatI CATG 7 cut(s) 925, 1153, 1177, 1568, 1605, 1650, 1746
FauI CCCGC 1 cut(s) 32
Fnu4HI GCNGC 8 cut(s) 317, 414, 444, 707, 966, 1046, 1402, 1580
FokI GGATG 6 cut(s) 57, 145, 150, 923, 1555, 1862
FriOI GRGCYC 2 cut(s) 518, 1148
Fsp4HI GCNGC 8 cut(s) 317, 414, 444, 707, 966, 1046, 1402, 1580
FspBI CTAG 4 cut(s) 644, 771, 1008, 1049
GlaI GCGC 4 cut(s) 412, 430, 486, 1004
GluI GCNGC 8 cut(s) 317, 414, 444, 707, 966, 1046, 1402, 1580
GsaI CCCAGC 2 cut(s) 188, 689
GsuI CTGGAG 3 cut(s) 338, 416, 1311
HaeII RGCGCY 2 cut(s) 414, 1006
HaeIII GGCC 5 cut(s) 43, 247, 382, 696, 1773
HgaI GACGC 1 cut(s) 445
HhaI GCGC 4 cut(s) 413, 431, 487, 1005
Hin1I GRCGYC 1 cut(s) 411
Hin1II CATG 7 cut(s) 929, 1157, 1181, 1572, 1609, 1654, 1750
Hin6I GCGC 4 cut(s) 411, 429, 485, 1003
HinP1I GCGC 4 cut(s) 411, 429, 485, 1003
HincII GTYRAC 2 cut(s) 1225, 1785
HindII GTYRAC 2 cut(s) 1225, 1785
HinfI GANTC 4 cut(s) 479, 833, 1310, 1860
HpaI GTTAAC 2 cut(s) 1225, 1785
HphI GGTGA 1 cut(s) 545
Hpy166II GTNNAC 3 cut(s) 1102, 1225, 1785
Hpy188I TCNGA 9 cut(s) 26, 252, 331, 492, 522, 745, 899, 1255, 1813
Hpy188III TCNNGA 3 cut(s) 298, 1451, 1574
Hpy8I GTNNAC 3 cut(s) 1102, 1225, 1785
Hpy99I CGWCG 2 cut(s) 410, 443
HpyAV CCTTC 5 cut(s) 444, 463, 566, 1149, 1555
HpyCH4IV ACGT 3 cut(s) 46, 817, 961
HpyCH4V TGCA 9 cut(s) 587, 654, 709, 724, 881, 925, 1102, 1504, 1853
HpyF10VI GCNNNNNNNGC 3 cut(s) 49, 422, 493
HpyF3I CTNAG 9 cut(s) 249, 261, 971, 1074, 1397, 1590, 1812, 1881, 1892
HpySE526I ACGT 3 cut(s) 46, 817, 961
Hsp92I GRCGYC 1 cut(s) 411
Hsp92II CATG 7 cut(s) 929, 1157, 1181, 1572, 1609, 1654, 1750
HspAI GCGC 4 cut(s) 411, 429, 485, 1003
KasI GGCGCC 1 cut(s) 410
KspAI GTTAAC 2 cut(s) 1225, 1785
KspI CCGCGG 1 cut(s) 417
Kzo9I GATC 7 cut(s) 26, 283, 402, 872, 1364, 1447, 1513
LguI GCTCTTC 1 cut(s) 675
LmnI GCTCC 5 cut(s) 231, 453, 513, 1576, 1602
Lsp1109I GCAGC 4 cut(s) 693, 952, 1413, 1591
LweI GCATC 7 cut(s) 79, 381, 483, 496, 513, 1195, 1840
MaeI CTAG 4 cut(s) 644, 771, 1008, 1049
MaeII ACGT 3 cut(s) 46, 817, 961
MaeIII GTNAC 3 cut(s) 823, 1436, 1549
MalI GATC 7 cut(s) 28, 285, 404, 874, 1366, 1449, 1515
MboI GATC 7 cut(s) 26, 283, 402, 872, 1364, 1447, 1513
MboII GAAGA 9 cut(s) 228, 542, 692, 854, 1024, 1193, 1196, 1304, 1451
MflI RGATCY 1 cut(s) 1364
MhlI GDGCHC 6 cut(s) 12, 518, 1104, 1148, 1419, 1826
MlsI TGGCCA 2 cut(s) 382, 1773
MluNI TGGCCA 2 cut(s) 382, 1773
Mly113I GGCGCC 1 cut(s) 411
MlyI GAGTC 2 cut(s) 488, 1869
Mox20I TGGCCA 2 cut(s) 382, 1773
Mph1103I ATGCAT 1 cut(s) 589
MscI TGGCCA 2 cut(s) 382, 1773
MseI TTAA 8 cut(s) 762, 864, 992, 1119, 1224, 1371, 1784, 1845
MslI CAYNNNNRTG 4 cut(s) 816, 1062, 1412, 1655
Msp20I TGGCCA 2 cut(s) 382, 1773
MspA1I CMGCKG 1 cut(s) 416
MvnI CGCG 3 cut(s) 416, 429, 443
MwoI GCNNNNNNNGC 3 cut(s) 49, 422, 493
NarI GGCGCC 1 cut(s) 411
NdeII GATC 7 cut(s) 26, 283, 402, 872, 1364, 1447, 1513
NlaIII CATG 7 cut(s) 929, 1157, 1181, 1572, 1609, 1654, 1750
NlaIV GGNNCC 2 cut(s) 11, 412
NmuCI GTSAC 1 cut(s) 1436
NsiI ATGCAT 1 cut(s) 589
NspI RCATGY 4 cut(s) 929, 1572, 1609, 1750
NspV TTCGAA 3 cut(s) 613, 904, 1706
PaeI GCATGC 1 cut(s) 1609
PciSI GCTCTTC 1 cut(s) 675
PcsI WCGNNNNNNNCGW 1 cut(s) 371
PfeI GAWTC 2 cut(s) 833, 1310
PflMI CCANNNNNTGG 2 cut(s) 1334, 1679
PkrI GCNGC 8 cut(s) 318, 415, 445, 708, 967, 1047, 1403, 1581
PleI GAGTC 2 cut(s) 487, 1868
PluTI GGCGCC 1 cut(s) 414
PpsI GAGTC 2 cut(s) 487, 1868
PsiI TTATAA 2 cut(s) 1620, 1632
Psp124BI GAGCTC 2 cut(s) 518, 1148
PspFI CCCAGC 2 cut(s) 184, 685
PspN4I GGNNCC 2 cut(s) 11, 412
PspPI GGNCC 3 cut(s) 41, 347, 695
PsuI RGATCY 1 cut(s) 1364
RsaI GTAC 7 cut(s) 536, 1273, 1596, 1751, 1798, 1857, 1867
RsaNI GTAC 7 cut(s) 535, 1272, 1595, 1750, 1797, 1856, 1866
RseI CAYNNNNRTG 4 cut(s) 816, 1062, 1412, 1655
SacI GAGCTC 2 cut(s) 518, 1148
SacII CCGCGG 1 cut(s) 417
SapI GCTCTTC 1 cut(s) 675
SaqAI TTAA 8 cut(s) 762, 864, 992, 1119, 1224, 1371, 1784, 1845
SatI GCNGC 8 cut(s) 317, 414, 444, 707, 966, 1046, 1402, 1580
Sau3AI GATC 7 cut(s) 26, 283, 402, 872, 1364, 1447, 1513
Sau96I GGNCC 3 cut(s) 41, 347, 695
SchI GAGTC 2 cut(s) 488, 1869
SduI GDGCHC 6 cut(s) 12, 518, 1104, 1148, 1419, 1826
SfaNI GCATC 7 cut(s) 79, 381, 483, 496, 513, 1195, 1840
SfoI GGCGCC 1 cut(s) 412
Sfr303I CCGCGG 1 cut(s) 417
SfuI TTCGAA 3 cut(s) 613, 904, 1706
SgrBI CCGCGG 1 cut(s) 417
SinI GGWCC 1 cut(s) 347
SmiMI CAYNNNNRTG 4 cut(s) 816, 1062, 1412, 1655
SmlI CTYRAG 1 cut(s) 497
SmoI CTYRAG 1 cut(s) 497
SpeI ACTAGT 1 cut(s) 770
SphI GCATGC 1 cut(s) 1609
SsiI CCGC 8 cut(s) 39, 56, 317, 414, 416, 443, 556, 1045
SspDI GGCGCC 1 cut(s) 410
SspI AATATT 1 cut(s) 667
SspMI CTAG 4 cut(s) 644, 771, 1008, 1049
SstI GAGCTC 2 cut(s) 518, 1148
TaiI ACGT 3 cut(s) 49, 820, 964
TaqII GACCGA 3 cut(s) 289, 335, 1602
TatI WGTACW 3 cut(s) 1271, 1796, 1865
TauI GCSGC 4 cut(s) 319, 416, 446, 1048
TfiI GAWTC 2 cut(s) 833, 1310
Tru1I TTAA 8 cut(s) 762, 864, 992, 1119, 1224, 1371, 1784, 1845
Tru9I TTAA 8 cut(s) 762, 864, 992, 1119, 1224, 1371, 1784, 1845
TscAI CASTG 3 cut(s) 574, 1784, 1896
TseFI GTSAC 1 cut(s) 1436
TseI GCWGC 4 cut(s) 706, 965, 1401, 1579
Tsp45I GTSAC 1 cut(s) 1436
TspDTI ATGAA 5 cut(s) 114, 615, 1194, 1221, 1656
TspGWI ACGGA 1 cut(s) 842
TspRI CASTG 3 cut(s) 574, 1784, 1896
Van91I CCANNNNNTGG 2 cut(s) 1334, 1679
VneI GTGCAC 1 cut(s) 1100
VpaK11BI GGWCC 1 cut(s) 347
XapI RAATTY 6 cut(s) 301, 367, 845, 900, 906, 1727
XceI RCATGY 4 cut(s) 929, 1572, 1609, 1750
XcmI CCANNNNNNNNNTGG 1 cut(s) 602
XspI CTAG 4 cut(s) 644, 771, 1008, 1049
Zsp2I ATGCAT 1 cut(s) 589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.