FvH4_4g13640

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000582
Physical Location & Seq
Forward (+)
17196196 .. 17200850
4655 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g13640.t2

Sequence Viewer

Length: 1686 bp
ATGGATACTTGTAAACATACATATATAAGGGTTGAAGAATTTATAGATTTCGTTGCAAAGAAGTGCACAGTTGCAAGCAGGGAAGACCTTGGAATTCGAATTCACAGCTTGGGGATGCATATTTCAGCCATCCGGGTTGCTAGGGATTTAGAATATGCTGCTCTGAAGAAATCTGGAGAGTTAATTATTCAAAAAGCAGATTCAAGATGTACAAAGGGACCTCCGAGAATGCAGCAAGACGAACATTTCACAACCTCTATAGGTAAACAGTTTTGTGGCAAGCACATTAGGTTTGATTCAGACAATGATGGTAGTGATAATAAAAATAATGACCATGTCAGAAGCATTCAGGTTAACGTATCGTCACAATCTGCTGGAATTTCTGACAGAGCGGACAGTGATGATGGTTTGGTTGTCTCTCCATCACAATCCAAGGGTCCACTCAGCCAGGTTAACGTATCGTCACAATCTGCTGGAAGTTCTGACAGAGTCTCTCCATCGCAGTCCAAAGGTCAACTTCCCTCGTTGAAAATGCAGAAAGACAAAGGTTTCAGTACCATTTCTTGTCGTGTTGGATCTTTTTCCTCTGTATGTAATCAGTTTTGTGGCAAGCAGATTAGGTTTGATTCTGCAGAAAACCCGGAGAATGAAGGTGGTGATGATGATTCAGATGATGAAGAAGCTTGTAATGACCAGGTCACATGCAGTTTGGTTAACTTCTCCTCACAACCTGGTGGAAGGTCTGACCGTGTGAGCAGCTGTCCTTACCCATCTGCAATGGAAGAGATACAACGGCTTGGGTTGGACCAGCTTTCCTCAGATAGTGGCAGCCAGAAGCACAAAGAGACTATTGACTCAATTAAAAAGAAAAGAAAATCTGAAGATCTTGCAATTGAAATCTATGTACCTCCCAAGTTGCGTAAGACAGAAAAGGTAGAACAAGTTGCTCTGCCAATAGAGAATGGCATGCGAGCCAATAATGTTAGAAATTTGGATAGAAACAAAGTGGAAAGCTGGCCACCTGTTGATTGGAGAACTGCGCCTAGGTATGATTATGCTTGTGCAAATGGGTTTAGGACACAGTCGCCAATTTTAAATCCTAGAATTGACTTACGAAAGAAGAGGGATGATTATTATAACAGATCTGTTAAACAGACGGACAAGATGATTCCCATTACATACACTCCTCCCTCATCTAACTTTGCGAAGAGCGATCGTCTGAGTACTTGCACACCTGATGCAATACAAGCAAAGGAAACTGGGAGACTAGGTGAGCTTGCTGCTTTTAAATACTTCATTGATAAAGCTGGCAAATCAGCTGTGAGGTGGGTTAATGAGTATAGTGAAACAAGGCTACCATATGACATAATTGTAGAGAATGAAGGTAGGAGAGAGTTCATTGAAGTTAAAGCAACCAGAAATCCAACCAAAGACTGGTTTGAAATGTCAGTGAGACAGTTGCAATTTGCAGTTGAGCAAGGTGAAGCTTTCAGTATTGCTCATGTCATTTTATCAGCTAATGATGCTGCGACGGTGAGAATATACAACAATCTGGAGAAACTGTTGATGAAGCATAACAACCAGGAGCTACAGGACCAGAATTGCAAGCTGAAGTCGGTCGTCATGGTGCTTGAGCCACAGAAGGAATTTACCATTGTGTCCTGTAACTCACGTGATGGTGGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

562

Amino Acids

62.86

Weight (kDa)

7.48

Isoelectric Point (pI)

54.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NOV_C PF13020 329 - 414 3e-18 Protein NO VEIN, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1137
AccB7I CCANNNNNTGG 1 cut(s) 1434
AccBSI CCGCTC 1 cut(s) 392
AciI CCGC 1 cut(s) 392
AclWI GGATC 1 cut(s) 583
AcoI YGGCCR 1 cut(s) 1016
AcsI RAATTY 6 cut(s) 38, 93, 99, 378, 988, 1646
AcuI CTGAAG 3 cut(s) 185, 900, 1631
AcvI CACGTG 1 cut(s) 1673
AfaI GTAC 4 cut(s) 211, 556, 906, 1225
AfiI CCNNNNNNNGG 1 cut(s) 1434
AgsI TTSAA 7 cut(s) 35, 191, 204, 529, 896, 1403, 1442
AjnI CCWGG 4 cut(s) 447, 693, 730, 1581
Alw21I GWGCWC 1 cut(s) 68
Alw26I GTCTC 5 cut(s) 421, 496, 839, 1258, 1447
Alw44I GTGCAC 1 cut(s) 64
AlwI GGATC 1 cut(s) 583
AoxI GGCC 1 cut(s) 1016
ApaLI GTGCAC 1 cut(s) 64
ApeKI GCWGC 6 cut(s) 158, 232, 756, 828, 1280, 1526
ApoI RAATTY 6 cut(s) 38, 93, 99, 378, 988, 1646
AspA2I CCTAGG 1 cut(s) 1043
AspLEI GCGC 1 cut(s) 1042
AspS9I GGNCC 4 cut(s) 218, 437, 805, 1594
AsuC2I CCSGG 2 cut(s) 134, 641
AsuHPI GGTGA 4 cut(s) 668, 1283, 1493, 1546
AsuII TTCGAA 1 cut(s) 97
AvaII GGWCC 4 cut(s) 218, 437, 805, 1594
AvrII CCTAGG 1 cut(s) 1043
BaeGI GKGCMC 1 cut(s) 68
BalI TGGCCA 1 cut(s) 1018
BbrPI CACGTG 1 cut(s) 1673
BbsI GAAGAC 1 cut(s) 90
Bbv12I GWGCWC 1 cut(s) 68
BbvI GCAGC 6 cut(s) 145, 244, 768, 840, 1267, 1513
BccI CCATC 7 cut(s) 137, 302, 398, 430, 505, 778, 1670
BceAI ACGGC 1 cut(s) 809
BciT130I CCWGG 4 cut(s) 449, 695, 732, 1583
BcnI CCSGG 2 cut(s) 134, 641
BcoDI GTCTC 5 cut(s) 421, 496, 839, 1258, 1447
BfaI CTAG 4 cut(s) 141, 1044, 1101, 1268
BfmI CTRYAG 3 cut(s) 258, 630, 1589
BglII AGATCT 2 cut(s) 883, 1142
BisI GCNGC 6 cut(s) 159, 233, 757, 829, 1281, 1527
BlnI CCTAGG 1 cut(s) 1043
BlsI GCNGC 6 cut(s) 160, 234, 758, 830, 1282, 1528
BmcAI AGTACT 1 cut(s) 1225
Bme1390I CCNGG 6 cut(s) 134, 449, 641, 695, 732, 1583
Bme18I GGWCC 4 cut(s) 218, 437, 805, 1594
BmgT120I GGNCC 4 cut(s) 218, 437, 805, 1594
BmiI GGNNCC 2 cut(s) 219, 438
BmrFI CCNGG 6 cut(s) 134, 449, 641, 695, 732, 1583
BmrI ACTGGG 1 cut(s) 1269
BmsI GCATC 3 cut(s) 105, 1228, 1513
BmuI ACTGGG 1 cut(s) 1269
BpiI GAAGAC 1 cut(s) 90
BpmI CTGGAG 2 cut(s) 195, 1574
Bpu14I TTCGAA 1 cut(s) 97
BpuEI CTTGAG 1 cut(s) 1652
BpuMI CCSGG 2 cut(s) 134, 641
BsaAI YACGTR 1 cut(s) 1673
BsaJI CCNNGG 3 cut(s) 88, 432, 1043
BsaXI ACNNNNNCTCC 6 cut(s) 1168, 1198, 1255, 1285, 1547, 1577
Bsc4I CCNNNNNNNGG 1 cut(s) 1434
Bse1I ACTGG 2 cut(s) 1264, 1439
Bse3DI GCAATG 1 cut(s) 783
BseBI CCWGG 4 cut(s) 449, 695, 732, 1583
BseDI CCNNGG 3 cut(s) 88, 432, 1043
BseGI GGATG 3 cut(s) 120, 129, 1132
BseLI CCNNNNNNNGG 1 cut(s) 1434
BseMI GCAATG 1 cut(s) 783
BseMII CTCAG 3 cut(s) 457, 831, 1211
BseNI ACTGG 2 cut(s) 1264, 1439
BseRI GAGGAG 2 cut(s) 712, 1176
BseSI GKGCMC 1 cut(s) 68
BseXI GCAGC 6 cut(s) 145, 244, 768, 840, 1267, 1513
Bsh1285I CGRYCG 2 cut(s) 1216, 1620
BshFI GGCC 1 cut(s) 1018
BsiEI CGRYCG 2 cut(s) 1216, 1620
BsiHKAI GWGCWC 1 cut(s) 68
BsiSI CCGG 2 cut(s) 133, 641
BslFI GGGAC 1 cut(s) 231
BslI CCNNNNNNNGG 1 cut(s) 1434
BsmAI GTCTC 5 cut(s) 421, 496, 839, 1258, 1447
BsmFI GGGAC 1 cut(s) 231
BsmI GAATGC 2 cut(s) 234, 345
BsnI GGCC 1 cut(s) 1018
Bsp119I TTCGAA 1 cut(s) 97
Bsp1286I GDGCHC 1 cut(s) 68
Bsp1407I TGTACA 1 cut(s) 209
Bsp143I GATC 4 cut(s) 575, 883, 1142, 1213
BspACI CCGC 1 cut(s) 392
BspANI GGCC 1 cut(s) 1018
BspCNI CTCAG 3 cut(s) 456, 830, 1212
BspLI GGNNCC 2 cut(s) 219, 438
BspMAI CTGCAG 1 cut(s) 634
BspPI GGATC 1 cut(s) 583
BspQI GCTCTTC 1 cut(s) 1202
BspT104I TTCGAA 1 cut(s) 97
BsrBI CCGCTC 1 cut(s) 392
BsrDI GCAATG 1 cut(s) 783
BsrGI TGTACA 1 cut(s) 209
BsrI ACTGG 2 cut(s) 1264, 1439
BssECI CCNNGG 3 cut(s) 88, 432, 1043
BssMI GATC 4 cut(s) 575, 883, 1142, 1213
BssT1I CCWWGG 3 cut(s) 88, 432, 1043
Bst2UI CCWGG 4 cut(s) 449, 695, 732, 1583
Bst4CI ACNGT 8 cut(s) 70, 270, 398, 749, 1083, 1458, 1534, 1563
Bst6I CTCTTC 3 cut(s) 777, 1115, 1202
BstAUI TGTACA 1 cut(s) 209
BstBAI YACGTR 1 cut(s) 1673
BstBI TTCGAA 1 cut(s) 97
BstC8I GCNNGC 9 cut(s) 76, 281, 611, 968, 972, 1016, 1278, 1309, 1607
BstDEI CTNAG 3 cut(s) 443, 817, 1220
BstF5I GGATG 3 cut(s) 120, 129, 1132
BstHHI GCGC 1 cut(s) 1042
BstKTI GATC 4 cut(s) 578, 886, 1145, 1216
BstMAI GTCTC 5 cut(s) 421, 496, 839, 1258, 1447
BstMBI GATC 4 cut(s) 575, 883, 1142, 1213
BstMCI CGRYCG 2 cut(s) 1216, 1620
BstMWI GCNNNNNNNGC 2 cut(s) 1247, 1523
BstNI CCWGG 4 cut(s) 449, 695, 732, 1583
BstNSI RCATGY 2 cut(s) 705, 970
BstSCI CCNGG 6 cut(s) 132, 447, 639, 693, 730, 1581
BstSFI CTRYAG 3 cut(s) 258, 630, 1589
BstSLI GKGCMC 1 cut(s) 68
BstV1I GCAGC 6 cut(s) 145, 244, 768, 840, 1267, 1513
BstV2I GAAGAC 1 cut(s) 90
BstX2I RGATCY 3 cut(s) 575, 883, 1142
BstYI RGATCY 3 cut(s) 575, 883, 1142
BsuRI GGCC 1 cut(s) 1018
BtgZI GCGATG 1 cut(s) 483
BtsCI GGATG 3 cut(s) 120, 129, 1132
BtsIMutI CAGTG 2 cut(s) 403, 1455
Cac8I GCNNGC 9 cut(s) 76, 281, 611, 968, 972, 1016, 1278, 1309, 1607
CfoI GCGC 1 cut(s) 1042
Cfr13I GGNCC 4 cut(s) 218, 437, 805, 1594
CsiI ACCWGGT 2 cut(s) 693, 730
Csp6I GTAC 4 cut(s) 210, 555, 905, 1224
CviAII CATG 5 cut(s) 335, 702, 967, 1502, 1624
CviQI GTAC 4 cut(s) 210, 555, 905, 1224
DdeI CTNAG 3 cut(s) 443, 817, 1220
DpnI GATC 4 cut(s) 577, 885, 1144, 1215
DpnII GATC 4 cut(s) 575, 883, 1142, 1213
DraI TTTAAA 2 cut(s) 1095, 1288
EaeI YGGCCR 1 cut(s) 1016
Eam1104I CTCTTC 3 cut(s) 777, 1115, 1202
EarI CTCTTC 3 cut(s) 777, 1115, 1202
Eco130I CCWWGG 3 cut(s) 88, 432, 1043
Eco47I GGWCC 4 cut(s) 218, 437, 805, 1594
Eco57I CTGAAG 3 cut(s) 185, 900, 1631
Eco72I CACGTG 1 cut(s) 1673
EcoO109I RGGNCCY 1 cut(s) 218
EcoRI GAATTC 2 cut(s) 93, 99
EcoRII CCWGG 4 cut(s) 447, 693, 730, 1581
EcoT14I CCWWGG 3 cut(s) 88, 432, 1043
EcoT22I ATGCAT 1 cut(s) 120
ErhI CCWWGG 3 cut(s) 88, 432, 1043
FaeI CATG 5 cut(s) 338, 705, 970, 1505, 1627
FalI AAGNNNNNCTT 2 cut(s) 501, 533
FaqI GGGAC 1 cut(s) 231
FatI CATG 5 cut(s) 334, 701, 966, 1501, 1623
FauNDI CATATG 1 cut(s) 1360
Fnu4HI GCNGC 6 cut(s) 159, 233, 757, 829, 1281, 1527
FokI GGATG 3 cut(s) 116, 127, 1139
Fsp4HI GCNGC 6 cut(s) 159, 233, 757, 829, 1281, 1527
FspBI CTAG 4 cut(s) 141, 1044, 1101, 1268
GlaI GCGC 1 cut(s) 1041
GluI GCNGC 6 cut(s) 159, 233, 757, 829, 1281, 1527
GsuI CTGGAG 2 cut(s) 195, 1574
HaeIII GGCC 1 cut(s) 1018
HapII CCGG 2 cut(s) 133, 641
HhaI GCGC 1 cut(s) 1042
Hin1II CATG 5 cut(s) 338, 705, 970, 1505, 1627
Hin6I GCGC 1 cut(s) 1040
HinP1I GCGC 1 cut(s) 1040
HincII GTYRAC 4 cut(s) 355, 454, 515, 715
HindII GTYRAC 4 cut(s) 355, 454, 515, 715
HindIII AAGCTT 2 cut(s) 681, 1485
HinfI GANTC 7 cut(s) 200, 296, 489, 626, 665, 854, 1168
HpaI GTTAAC 3 cut(s) 355, 454, 715
HpaII CCGG 2 cut(s) 133, 641
HphI GGTGA 4 cut(s) 668, 1283, 1493, 1546
Hpy166II GTNNAC 8 cut(s) 14, 66, 266, 355, 440, 454, 515, 715
Hpy188III TCNNGA 3 cut(s) 174, 204, 1553
Hpy8I GTNNAC 8 cut(s) 14, 66, 266, 355, 440, 454, 515, 715
Hpy99I CGWCG 1 cut(s) 1534
HpyAV CCTTC 4 cut(s) 644, 732, 1376, 1636
HpyCH4III ACNGT 8 cut(s) 70, 270, 398, 749, 1083, 1458, 1534, 1563
HpyCH4IV ACGT 3 cut(s) 357, 456, 1672
HpyF10VI GCNNNNNNNGC 2 cut(s) 1247, 1523
HpyF3I CTNAG 3 cut(s) 443, 817, 1220
HpySE526I ACGT 3 cut(s) 357, 456, 1672
Hsp92II CATG 5 cut(s) 338, 705, 970, 1505, 1627
HspAI GCGC 1 cut(s) 1040
KspAI GTTAAC 3 cut(s) 355, 454, 715
Kzo9I GATC 4 cut(s) 575, 883, 1142, 1213
LguI GCTCTTC 1 cut(s) 1202
LmnI GCTCC 1 cut(s) 1585
Lsp1109I GCAGC 6 cut(s) 145, 244, 768, 840, 1267, 1513
LweI GCATC 3 cut(s) 105, 1228, 1513
MabI ACCWGGT 2 cut(s) 693, 730
MaeI CTAG 4 cut(s) 141, 1044, 1101, 1268
MaeII ACGT 3 cut(s) 357, 456, 1672
MaeIII GTNAC 4 cut(s) 363, 462, 697, 1664
MalI GATC 4 cut(s) 577, 885, 1144, 1215
MbiI CCGCTC 1 cut(s) 392
MboI GATC 4 cut(s) 575, 883, 1142, 1213
MboII GAAGA 8 cut(s) 47, 95, 178, 689, 794, 893, 1132, 1219
MfeI CAATTG 1 cut(s) 891
MflI RGATCY 3 cut(s) 575, 883, 1142
MhlI GDGCHC 1 cut(s) 68
MlsI TGGCCA 1 cut(s) 1018
MluNI TGGCCA 1 cut(s) 1018
MlyI GAGTC 2 cut(s) 498, 848
MmeI TCCRAC 3 cut(s) 553, 783, 1448
Mox20I TGGCCA 1 cut(s) 1018
Mph1103I ATGCAT 1 cut(s) 120
MscI TGGCCA 1 cut(s) 1018
Msp20I TGGCCA 1 cut(s) 1018
MspA1I CMGCKG 2 cut(s) 759, 1319
MspI CCGG 2 cut(s) 133, 641
MspR9I CCNGG 6 cut(s) 134, 449, 641, 695, 732, 1583
MunI CAATTG 1 cut(s) 891
Mva1269I GAATGC 2 cut(s) 234, 345
MvaI CCWGG 4 cut(s) 449, 695, 732, 1583
MwoI GCNNNNNNNGC 2 cut(s) 1247, 1523
NciI CCSGG 2 cut(s) 134, 641
NdeI CATATG 1 cut(s) 1360
NdeII GATC 4 cut(s) 575, 883, 1142, 1213
NlaIII CATG 5 cut(s) 338, 705, 970, 1505, 1627
NlaIV GGNNCC 2 cut(s) 219, 438
NmuCI GTSAC 3 cut(s) 363, 462, 697
NsiI ATGCAT 1 cut(s) 120
NspI RCATGY 2 cut(s) 705, 970
NspV TTCGAA 1 cut(s) 97
PaeI GCATGC 1 cut(s) 970
PciSI GCTCTTC 1 cut(s) 1202
PctI GAATGC 2 cut(s) 234, 345
PfeI GAWTC 5 cut(s) 200, 296, 626, 665, 1168
PflFI GACNNNGTC 4 cut(s) 335, 488, 695, 1081
PflMI CCANNNNNTGG 1 cut(s) 1434
PkrI GCNGC 6 cut(s) 160, 234, 758, 830, 1282, 1528
Ple19I CGATCG 1 cut(s) 1216
PleI GAGTC 2 cut(s) 497, 848
PmaCI CACGTG 1 cut(s) 1673
PmlI CACGTG 1 cut(s) 1673
PpsI GAGTC 2 cut(s) 497, 848
Ppu21I YACGTR 1 cut(s) 1673
PpuMI RGGWCCY 1 cut(s) 218
PsiI TTATAA 1 cut(s) 1137
Psp5II RGGWCCY 1 cut(s) 218
Psp6I CCWGG 4 cut(s) 447, 693, 730, 1581
PspCI CACGTG 1 cut(s) 1673
PspGI CCWGG 4 cut(s) 447, 693, 730, 1581
PspN4I GGNNCC 2 cut(s) 219, 438
PspPI GGNCC 4 cut(s) 218, 437, 805, 1594
PspPPI RGGWCCY 1 cut(s) 218
PstI CTGCAG 1 cut(s) 634
PsuI RGATCY 3 cut(s) 575, 883, 1142
PsyI GACNNNGTC 4 cut(s) 335, 488, 695, 1081
PvuI CGATCG 1 cut(s) 1216
PvuII CAGCTG 2 cut(s) 759, 1319
RsaI GTAC 4 cut(s) 211, 556, 906, 1225
RsaNI GTAC 4 cut(s) 210, 555, 905, 1224
SapI GCTCTTC 1 cut(s) 1202
SatI GCNGC 6 cut(s) 159, 233, 757, 829, 1281, 1527
Sau3AI GATC 4 cut(s) 575, 883, 1142, 1213
Sau96I GGNCC 4 cut(s) 218, 437, 805, 1594
ScaI AGTACT 1 cut(s) 1225
SchI GAGTC 2 cut(s) 498, 848
ScrFI CCNGG 6 cut(s) 134, 449, 641, 695, 732, 1583
SduI GDGCHC 1 cut(s) 68
SexAI ACCWGGT 2 cut(s) 693, 730
SfaNI GCATC 3 cut(s) 105, 1228, 1513
SfcI CTRYAG 3 cut(s) 258, 630, 1589
SfuI TTCGAA 1 cut(s) 97
SinI GGWCC 4 cut(s) 218, 437, 805, 1594
SmlI CTYRAG 1 cut(s) 1631
SmoI CTYRAG 1 cut(s) 1631
SphI GCATGC 1 cut(s) 970
SsiI CCGC 1 cut(s) 392
SspMI CTAG 4 cut(s) 141, 1044, 1101, 1268
StyD4I CCNGG 6 cut(s) 132, 447, 639, 693, 730, 1581
StyI CCWWGG 3 cut(s) 88, 432, 1043
TaaI ACNGT 8 cut(s) 70, 270, 398, 749, 1083, 1458, 1534, 1563
TaiI ACGT 3 cut(s) 360, 459, 1675
TaqI TCGA 1 cut(s) 97
TaqII GACCGA 1 cut(s) 1606
TatI WGTACW 2 cut(s) 209, 1223
TfiI GAWTC 5 cut(s) 200, 296, 626, 665, 1168
TscAI CASTG 2 cut(s) 403, 1455
TseFI GTSAC 3 cut(s) 363, 462, 697
TseI GCWGC 6 cut(s) 158, 232, 756, 828, 1280, 1526
Tsp45I GTSAC 3 cut(s) 363, 462, 697
TspDTI ATGAA 6 cut(s) 663, 690, 1285, 1387, 1395, 1583
TspGWI ACGGA 1 cut(s) 1172
TspRI CASTG 2 cut(s) 403, 1455
Tth111I GACNNNGTC 4 cut(s) 335, 488, 695, 1081
Van91I CCANNNNNTGG 1 cut(s) 1434
VneI GTGCAC 1 cut(s) 64
VpaK11BI GGWCC 4 cut(s) 218, 437, 805, 1594
XapI RAATTY 6 cut(s) 38, 93, 99, 378, 988, 1646
XceI RCATGY 2 cut(s) 705, 970
XcmI CCANNNNNNNNNTGG 2 cut(s) 1026, 1431
XmaJI CCTAGG 1 cut(s) 1043
XspI CTAG 4 cut(s) 141, 1044, 1101, 1268
ZrmI AGTACT 1 cut(s) 1225
Zsp2I ATGCAT 1 cut(s) 120
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.