Rw4G015850

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000582
Physical Location & Seq
Forward (+)
36313500 .. 36317587
4088 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G015850.1

Sequence Viewer

Length: 2025 bp
ATGAACGCCCCTCCGTTTATCTCCTCCGGCGGCCCATGGAGTCAGCCACTGCCGCCACCACTTGCCCTAAACCCCAATTTCTCCCTCCAAAACCCGCTCAATCTATACATGTACCTTTCAAACCTCGCCTCCTTCACACCCCACTACTATCCACCTTTCCCTCCCAATAATTTCCCAATACAAAACCCTAGCTTCGCCCCCAAGCACTTCTCCAATTCAGCATTTCATCCTCAGGCTCAGGCCTCGTCCCAGAACTTGAAAGAGCTGCTGGAGAGAATCGACCGCGCCGTGGAGAAGGCTCGCTCCGACCTTATTGCCGCCGGGGAAAGCGTCTCGGCCTGGAAGGTCTTGCAGTCTGCGATTCGGATACTCGAGGTTGATTGCTGGAGCTCTCTAGGGTTTCAAATGCAGCAGGTGCCATCTCTGCACCGCCTCATGCTCACTCAAGGCAAGATAGATGCATTTATCCATTGTTTTGTTGGGGTTCGAAGAATTGCTTCATTGTATGATCTCGAAGTAGCAATCTGCAAGAATGAGGGCGTTGAACGGTTTGAAGAGCTGGGATTGGGCCCTTTGTTGCGAAATCCTCTTGTCGTGCATTATTTCTCAGTGAAGTGTGATGCAACTGAAGTGTTTAGGATAACGAGTGAGGAGATAATATCTTTACTTTCTGAGTTCATGGATGCTTGTAAACATACATATATAAGGGTTGAAGAATTTTTAGATTTCATTGTAAAGAAGTGCGCAGTTGCAAGCAAGGAAGAGCTTGGAATACGAATTCACAGCTTGGGGATGCATATTTCAGCCATCCGGGTTGCTAGGGATTTAGAATCTGCTGCTCTGAAGAAATCTGGAGAGTTAATTATTCAACAACCAGATTCAAGATGTATAAAGCGACCAATGAGAATGCAGCAAGATGAACATTTCACCACCTCCATACGTAAACAGTTTTGTGGCAAGCACATTAGGTTTGGTTCTGCAGAAAACTTGGAGGATGAATGTAGTGATGATGATTTACATGATGAAGAAGATTATAATCGTGACCAGGTCACATGCAGTGTGGTTAACTTCTCATCACAATCTGGTGGAAGGTCTGACCGTGTGAGCAGCTGTCCTTACCCATCTGCAATAGAAGAGATACAACGGCTTGGGTTGGACCAACTTTTCCCAAATAGTGGCAGCCAAAAGCATAAAGAGACTAATGACTCGGTTAAAAAGAAAAGAAAATCTGAAAATCTTGCAAGTGCAATCTCTATGCCCCCCAAATTGCGCAAGACAGCAAAGGTAGAACAAGTCGCTTGGCCAATAGAGAATGGTAGGCAAGCCAATAATGATAGAAATTTGGATGGAAGGAAAGCGGAAAGCTGGCCACCTGTTGATTGGAGAACTGCGCCAAGGTATGATTATGCTTGTGCAAATGGCTTTAGGACGCAGGCACCAATTTTACAGCCTAGAAGTGACTTACAAAAGAAGGGGGATGATAATTTGGACACATTTGTTAAGCAGACGTATAATATGATTCCAGTTACAGATACTCCTCAGTGGGGCACATCTAACTTTGGCAAGAGAGATCGTCTTAGTACTTGCACACCTGATGCAATACAAGCAAAGGAAACTGGGAGACTAGGTGAGCTTGCTGCTTTTAAATACTTTATTGAGAAAGCTGGCAAGTCAGCTGTGAAGTGGGTTAATGAGCATAGTGAAACAAGGCTACCGTATGATATAGTGGTAGGGGAGAATGAAGACAGAAAAGAGTTCATTGAAGTTAAAGCAACCAGAAATCCAACCAAAGACTGGTTTGAAATGTCAGTGAGACAGTTGCAATTTGCAGTTGAGCAAGGTGAAGCTTTCAATATTGCGCATGTCATTTTATCAGATAATAATGTTGCGACAGTGAGAGTATACAACAATCTGGAGAAACTATTGATGAAGCATAACAACCAGGAGCTACAGGACCAGGATTGCAAGCTGAAGTTAGTTGTCTTGGTGCTTGAGCCGCAGAAGGAATTTACCATTGTGTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

674

Amino Acids

76.47

Weight (kDa)

6.5

Isoelectric Point (pI)

49.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NOV_C PF13020 543 - 628 5.6e-18 Protein NO VEIN, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1035
AarI CACCTGC 1 cut(s) 403
Acc16I TGCGCA 3 cut(s) 745, 1271, 1860
Acc36I ACCTGC 1 cut(s) 403
AccB1I GGYRCC 2 cut(s) 415, 1435
AccB7I CCANNNNNTGG 2 cut(s) 1175, 1794
AccBSI CCGCTC 1 cut(s) 97
AccI GTMKAC 1 cut(s) 1902
AccII CGCG 1 cut(s) 285
AciI CCGC 8 cut(s) 30, 53, 95, 283, 318, 430, 1358, 1997
AcoI YGGCCR 2 cut(s) 1301, 1367
AcsI RAATTY 4 cut(s) 716, 777, 1339, 2006
AcuI CTGAAG 3 cut(s) 648, 863, 1991
AfaI GTAC 2 cut(s) 113, 1582
AfiI CCNNNNNNNGG 4 cut(s) 289, 1175, 1544, 1794
AflIII ACRYGT 1 cut(s) 108
AjnI CCWGG 4 cut(s) 338, 1044, 1941, 1956
Alw21I GWGCWC 1 cut(s) 392
Alw26I GTCTC 4 cut(s) 337, 1190, 1615, 1807
AlwNI CAGNNNCTG 1 cut(s) 49
Ama87I CYCGRG 1 cut(s) 371
AoxI GGCC 6 cut(s) 31, 240, 336, 568, 1301, 1367
ApaI GGGCCC 1 cut(s) 572
ApeKI GCWGC 7 cut(s) 265, 409, 836, 910, 1107, 1179, 1637
ApoI RAATTY 4 cut(s) 716, 777, 1339, 2006
Asp700I GAANNNNTTC 1 cut(s) 496
AspLEI GCGC 5 cut(s) 287, 746, 1272, 1393, 1861
AspS9I GGNCC 5 cut(s) 32, 568, 569, 1156, 1954
AsuC2I CCSGG 2 cut(s) 322, 812
AsuHPI GGTGA 3 cut(s) 919, 1640, 1853
AsuII TTCGAA 1 cut(s) 487
AvaI CYCGRG 1 cut(s) 371
AvaII GGWCC 2 cut(s) 1156, 1954
AxyI CCTNAGG 1 cut(s) 231
BaeGI GKGCMC 2 cut(s) 572, 1550
BalI TGGCCA 2 cut(s) 1303, 1369
BanI GGYRCC 2 cut(s) 415, 1435
BanII GRGCYC 2 cut(s) 392, 572
BbsI GAAGAC 1 cut(s) 1749
Bbv12I GWGCWC 1 cut(s) 392
BbvI GCAGC 7 cut(s) 252, 421, 823, 922, 1119, 1191, 1624
BccI CCATC 4 cut(s) 427, 815, 1129, 1340
BceAI ACGGC 2 cut(s) 272, 1160
BcgI CGANNNNNNTGC 2 cut(s) 296, 330
BciT130I CCWGG 4 cut(s) 340, 1046, 1943, 1958
BciVI GTATCC 1 cut(s) 360
BcnI CCSGG 2 cut(s) 322, 812
BcoDI GTCTC 4 cut(s) 337, 1190, 1615, 1807
BfaI CTAG 5 cut(s) 189, 395, 819, 1452, 1625
BfmI CTRYAG 2 cut(s) 978, 1949
BfuAI ACCTGC 1 cut(s) 403
BfuI GTATCC 1 cut(s) 360
BmcAI AGTACT 1 cut(s) 1582
Bme1390I CCNGG 6 cut(s) 322, 340, 812, 1046, 1943, 1958
Bme18I GGWCC 2 cut(s) 1156, 1954
BmeT110I CYCGRG 1 cut(s) 371
BmgT120I GGNCC 5 cut(s) 32, 568, 569, 1156, 1954
BmiI GGNNCC 3 cut(s) 417, 570, 1437
BmrFI CCNGG 6 cut(s) 322, 340, 812, 1046, 1943, 1958
BmrI ACTGGG 1 cut(s) 1626
BmsI GCATC 5 cut(s) 448, 610, 673, 783, 1585
BmuI ACTGGG 1 cut(s) 1626
BpiI GAAGAC 1 cut(s) 1749
BpmI CTGGAG 4 cut(s) 290, 406, 873, 1934
Bpu10I CCTNAGC 1 cut(s) 237
Bpu14I TTCGAA 1 cut(s) 487
BpuEI CTTGAG 2 cut(s) 429, 2012
BpuMI CCSGG 2 cut(s) 322, 812
BsaAI YACGTR 1 cut(s) 941
BsaBI GATNNNNATC 1 cut(s) 1035
BsaJI CCNNGG 4 cut(s) 35, 288, 321, 1394
BsaXI ACNNNNNCTCC 6 cut(s) 113, 143, 1519, 1549, 1612, 1642
Bsc4I CCNNNNNNNGG 4 cut(s) 289, 1175, 1544, 1794
Bse1I ACTGG 3 cut(s) 1523, 1621, 1799
Bse21I CCTNAGG 1 cut(s) 231
Bse8I GATNNNNATC 1 cut(s) 1035
BseBI CCWGG 4 cut(s) 340, 1046, 1943, 1958
BseDI CCNNGG 4 cut(s) 35, 288, 321, 1394
BseGI GGATG 7 cut(s) 226, 688, 798, 807, 1000, 1351, 1483
BseJI GATNNNNATC 1 cut(s) 1035
BseLI CCNNNNNNNGG 4 cut(s) 289, 1175, 1544, 1794
BseMII CTCAG 5 cut(s) 245, 251, 621, 663, 1553
BseNI ACTGG 3 cut(s) 1523, 1621, 1799
BseRI GAGGAG 3 cut(s) 13, 665, 1527
BseSI GKGCMC 2 cut(s) 572, 1550
BseXI GCAGC 7 cut(s) 252, 421, 823, 922, 1119, 1191, 1624
BseYI CCCAGC 1 cut(s) 559
BsgI GTGCAG 1 cut(s) 410
Bsh1236I CGCG 1 cut(s) 285
Bsh1285I CGRYCG 1 cut(s) 283
BshFI GGCC 6 cut(s) 33, 242, 338, 570, 1303, 1369
BshNI GGYRCC 2 cut(s) 415, 1435
BsiEI CGRYCG 1 cut(s) 283
BsiHKAI GWGCWC 1 cut(s) 392
BsiHKCI CYCGRG 1 cut(s) 371
BsiSI CCGG 3 cut(s) 27, 321, 811
BslFI GGGAC 1 cut(s) 232
BslI CCNNNNNNNGG 4 cut(s) 289, 1175, 1544, 1794
BsmAI GTCTC 4 cut(s) 337, 1190, 1615, 1807
BsmBI CGTCTC 1 cut(s) 337
BsmFI GGGAC 1 cut(s) 232
BsmI GAATGC 1 cut(s) 912
BsnI GGCC 6 cut(s) 33, 242, 338, 570, 1303, 1369
BsoBI CYCGRG 1 cut(s) 371
Bsp119I TTCGAA 1 cut(s) 487
Bsp120I GGGCCC 1 cut(s) 568
Bsp1286I GDGCHC 3 cut(s) 392, 572, 1550
Bsp143I GATC 2 cut(s) 508, 1570
Bsp19I CCATGG 1 cut(s) 35
BspACI CCGC 8 cut(s) 30, 53, 95, 283, 318, 430, 1358, 1997
BspANI GGCC 6 cut(s) 33, 242, 338, 570, 1303, 1369
BspCNI CTCAG 5 cut(s) 244, 250, 620, 664, 1552
BspFNI CGCG 1 cut(s) 285
BspLI GGNNCC 3 cut(s) 417, 570, 1437
BspMAI CTGCAG 1 cut(s) 982
BspMI ACCTGC 1 cut(s) 403
BspQI GCTCTTC 2 cut(s) 549, 756
BspT104I TTCGAA 1 cut(s) 487
BspT107I GGYRCC 2 cut(s) 415, 1435
BsrBI CCGCTC 1 cut(s) 97
BsrI ACTGG 3 cut(s) 1523, 1621, 1799
BssECI CCNNGG 4 cut(s) 35, 288, 321, 1394
BssMI GATC 2 cut(s) 508, 1570
BssNAI GTATAC 1 cut(s) 1903
BssT1I CCWWGG 2 cut(s) 35, 1394
Bst1107I GTATAC 1 cut(s) 1903
Bst2UI CCWGG 4 cut(s) 340, 1046, 1943, 1958
Bst4CI ACNGT 6 cut(s) 549, 948, 1100, 1716, 1818, 1894
Bst6I CTCTTC 3 cut(s) 549, 756, 1128
BstAPI GCANNNNNTGC 1 cut(s) 415
BstBAI YACGTR 1 cut(s) 941
BstBI TTCGAA 1 cut(s) 487
BstC8I GCNNGC 9 cut(s) 301, 754, 959, 1323, 1367, 1434, 1635, 1666, 1967
BstDEI CTNAG 6 cut(s) 231, 237, 607, 672, 1539, 1577
BstDSI CCRYGG 2 cut(s) 35, 288
BstF5I GGATG 7 cut(s) 226, 688, 798, 807, 1000, 1351, 1483
BstFNI CGCG 1 cut(s) 285
BstHHI GCGC 5 cut(s) 287, 746, 1272, 1393, 1861
BstKTI GATC 2 cut(s) 511, 1573
BstMAI GTCTC 4 cut(s) 337, 1190, 1615, 1807
BstMBI GATC 2 cut(s) 508, 1570
BstMCI CGRYCG 1 cut(s) 283
BstMWI GCNNNNNNNGC 5 cut(s) 52, 415, 424, 1604, 1996
BstNI CCWGG 4 cut(s) 340, 1046, 1943, 1958
BstNSI RCATGY 3 cut(s) 112, 1056, 1865
BstSCI CCNGG 6 cut(s) 320, 338, 810, 1044, 1941, 1956
BstSFI CTRYAG 2 cut(s) 978, 1949
BstSLI GKGCMC 2 cut(s) 572, 1550
BstSNI TACGTA 1 cut(s) 941
BstUI CGCG 1 cut(s) 285
BstV1I GCAGC 7 cut(s) 252, 421, 823, 922, 1119, 1191, 1624
BstV2I GAAGAC 1 cut(s) 1749
BstZ17I GTATAC 1 cut(s) 1903
Bsu36I CCTNAGG 1 cut(s) 231
BsuI GTATCC 1 cut(s) 360
BsuRI GGCC 6 cut(s) 33, 242, 338, 570, 1303, 1369
BtgI CCRYGG 2 cut(s) 35, 288
BtsCI GGATG 7 cut(s) 226, 688, 798, 807, 1000, 1351, 1483
BtsI GCAGTG 2 cut(s) 47, 1063
BtsIMutI CAGTG 6 cut(s) 47, 615, 1063, 1547, 1815, 1899
BveI ACCTGC 1 cut(s) 403
Cac8I GCNNGC 9 cut(s) 301, 754, 959, 1323, 1367, 1434, 1635, 1666, 1967
CaiI CAGNNNCTG 1 cut(s) 49
CfoI GCGC 5 cut(s) 287, 746, 1272, 1393, 1861
Cfr13I GGNCC 5 cut(s) 32, 568, 569, 1156, 1954
CseI GACGC 2 cut(s) 319, 1438
CsiI ACCWGGT 1 cut(s) 1044
Csp6I GTAC 2 cut(s) 112, 1581
CviAII CATG 7 cut(s) 36, 109, 436, 679, 1019, 1053, 1862
CviQI GTAC 2 cut(s) 112, 1581
DdeI CTNAG 6 cut(s) 231, 237, 607, 672, 1539, 1577
DpnI GATC 2 cut(s) 510, 1572
DpnII GATC 2 cut(s) 508, 1570
DraI TTTAAA 1 cut(s) 1645
EaeI YGGCCR 2 cut(s) 1301, 1367
Eam1104I CTCTTC 3 cut(s) 549, 756, 1128
EarI CTCTTC 3 cut(s) 549, 756, 1128
Ecl136II GAGCTC 1 cut(s) 390
Eco105I TACGTA 1 cut(s) 941
Eco130I CCWWGG 2 cut(s) 35, 1394
Eco147I AGGCCT 1 cut(s) 242
Eco24I GRGCYC 2 cut(s) 392, 572
Eco47I GGWCC 2 cut(s) 1156, 1954
Eco53kI GAGCTC 1 cut(s) 390
Eco57I CTGAAG 3 cut(s) 648, 863, 1991
Eco81I CCTNAGG 1 cut(s) 231
Eco88I CYCGRG 1 cut(s) 371
EcoICRI GAGCTC 1 cut(s) 390
EcoO109I RGGNCCY 1 cut(s) 569
EcoRI GAATTC 1 cut(s) 777
EcoRII CCWGG 4 cut(s) 338, 1044, 1941, 1956
EcoT14I CCWWGG 2 cut(s) 35, 1394
EcoT22I ATGCAT 2 cut(s) 463, 798
EcoT38I GRGCYC 2 cut(s) 392, 572
ErhI CCWWGG 2 cut(s) 35, 1394
Esp3I CGTCTC 1 cut(s) 337
FaeI CATG 7 cut(s) 39, 112, 439, 682, 1022, 1056, 1865
FalI AAGNNNNNCTT 2 cut(s) 481, 513
FaqI GGGAC 1 cut(s) 232
FatI CATG 7 cut(s) 35, 108, 435, 678, 1018, 1052, 1861
FauI CCCGC 1 cut(s) 102
FblI GTMKAC 1 cut(s) 1902
FokI GGATG 7 cut(s) 213, 695, 794, 805, 1007, 1358, 1490
FriOI GRGCYC 2 cut(s) 392, 572
FspBI CTAG 5 cut(s) 189, 395, 819, 1452, 1625
FspI TGCGCA 3 cut(s) 745, 1271, 1860
GlaI GCGC 5 cut(s) 286, 745, 1271, 1392, 1860
GsaI CCCAGC 1 cut(s) 563
GsuI CTGGAG 4 cut(s) 290, 406, 873, 1934
HaeIII GGCC 6 cut(s) 33, 242, 338, 570, 1303, 1369
HapII CCGG 3 cut(s) 27, 321, 811
HgaI GACGC 2 cut(s) 319, 1438
HhaI GCGC 5 cut(s) 287, 746, 1272, 1393, 1861
Hin1II CATG 7 cut(s) 39, 112, 439, 682, 1022, 1056, 1865
Hin6I GCGC 5 cut(s) 285, 744, 1270, 1391, 1859
HinP1I GCGC 5 cut(s) 285, 744, 1270, 1391, 1859
HincII GTYRAC 1 cut(s) 1066
HindII GTYRAC 1 cut(s) 1066
HindIII AAGCTT 1 cut(s) 1845
HinfI GANTC 7 cut(s) 40, 276, 361, 830, 878, 1205, 1519
HpaI GTTAAC 1 cut(s) 1066
HpaII CCGG 3 cut(s) 27, 321, 811
HphI GGTGA 3 cut(s) 919, 1640, 1853
Hpy166II GTNNAC 4 cut(s) 692, 944, 1066, 1903
Hpy188I TCNGA 7 cut(s) 307, 366, 673, 843, 1096, 1231, 1876
Hpy188III TCNNGA 6 cut(s) 512, 852, 882, 1040, 1913, 2022
Hpy8I GTNNAC 4 cut(s) 692, 944, 1066, 1903
HpyAV CCTTC 7 cut(s) 142, 289, 337, 1083, 1344, 1465, 1996
HpyCH4III ACNGT 6 cut(s) 549, 948, 1100, 1716, 1818, 1894
HpyCH4IV ACGT 2 cut(s) 940, 1508
HpyF10VI GCNNNNNNNGC 5 cut(s) 52, 415, 424, 1604, 1996
HpyF3I CTNAG 6 cut(s) 231, 237, 607, 672, 1539, 1577
HpySE526I ACGT 2 cut(s) 940, 1508
Hsp92II CATG 7 cut(s) 39, 112, 439, 682, 1022, 1056, 1865
HspAI GCGC 5 cut(s) 285, 744, 1270, 1391, 1859
KspAI GTTAAC 1 cut(s) 1066
Kzo9I GATC 2 cut(s) 508, 1570
LguI GCTCTTC 2 cut(s) 549, 756
LmnI GCTCC 3 cut(s) 308, 387, 1945
Lsp1109I GCAGC 7 cut(s) 252, 421, 823, 922, 1119, 1191, 1624
LweI GCATC 5 cut(s) 448, 610, 673, 783, 1585
MabI ACCWGGT 1 cut(s) 1044
MaeI CTAG 5 cut(s) 189, 395, 819, 1452, 1625
MaeII ACGT 2 cut(s) 940, 1508
MaeIII GTNAC 4 cut(s) 1040, 1048, 1457, 1525
MalI GATC 2 cut(s) 510, 1572
MbiI CCGCTC 1 cut(s) 97
MboI GATC 2 cut(s) 508, 1570
MboII GAAGA 9 cut(s) 501, 566, 725, 773, 856, 1037, 1040, 1145, 1754
MhlI GDGCHC 3 cut(s) 392, 572, 1550
MlsI TGGCCA 2 cut(s) 1303, 1369
MluNI TGGCCA 2 cut(s) 1303, 1369
MlyI GAGTC 2 cut(s) 49, 1199
MmeI TCCRAC 3 cut(s) 330, 1134, 1808
Mox20I TGGCCA 2 cut(s) 1303, 1369
Mph1103I ATGCAT 2 cut(s) 463, 798
MroXI GAANNNNTTC 1 cut(s) 496
MscI TGGCCA 2 cut(s) 1303, 1369
MseI TTAA 7 cut(s) 860, 1065, 1212, 1500, 1644, 1689, 1767
Msp20I TGGCCA 2 cut(s) 1303, 1369
MspA1I CMGCKG 2 cut(s) 1110, 1676
MspI CCGG 3 cut(s) 27, 321, 811
MspR9I CCNGG 6 cut(s) 322, 340, 812, 1046, 1943, 1958
Mva1269I GAATGC 1 cut(s) 912
MvaI CCWGG 4 cut(s) 340, 1046, 1943, 1958
MvnI CGCG 1 cut(s) 285
MwoI GCNNNNNNNGC 5 cut(s) 52, 415, 424, 1604, 1996
NciI CCSGG 2 cut(s) 322, 812
NcoI CCATGG 1 cut(s) 35
NdeII GATC 2 cut(s) 508, 1570
NlaIII CATG 7 cut(s) 39, 112, 439, 682, 1022, 1056, 1865
NlaIV GGNNCC 3 cut(s) 417, 570, 1437
NmeAIII GCCGAG 1 cut(s) 314
NmuCI GTSAC 3 cut(s) 1040, 1048, 1457
NsbI TGCGCA 3 cut(s) 745, 1271, 1860
NsiI ATGCAT 2 cut(s) 463, 798
NspI RCATGY 3 cut(s) 112, 1056, 1865
NspV TTCGAA 1 cut(s) 487
PaeR7I CTCGAG 1 cut(s) 371
PaqCI CACCTGC 1 cut(s) 403
PceI AGGCCT 1 cut(s) 242
PciI ACATGT 1 cut(s) 108
PciSI GCTCTTC 2 cut(s) 549, 756
PcsI WCGNNNNNNNCGW 1 cut(s) 285
PctI GAATGC 1 cut(s) 912
PdmI GAANNNNTTC 1 cut(s) 496
PfeI GAWTC 5 cut(s) 276, 361, 830, 878, 1519
PflFI GACNNNGTC 1 cut(s) 1046
PflMI CCANNNNNTGG 2 cut(s) 1175, 1794
PleI GAGTC 2 cut(s) 48, 1199
PpsI GAGTC 2 cut(s) 48, 1199
Ppu21I YACGTR 1 cut(s) 941
PscI ACATGT 1 cut(s) 108
PsiI TTATAA 1 cut(s) 1035
Psp124BI GAGCTC 1 cut(s) 392
Psp6I CCWGG 4 cut(s) 338, 1044, 1941, 1956
PspFI CCCAGC 1 cut(s) 559
PspGI CCWGG 4 cut(s) 338, 1044, 1941, 1956
PspN4I GGNNCC 3 cut(s) 417, 570, 1437
PspOMI GGGCCC 1 cut(s) 568
PspPI GGNCC 5 cut(s) 32, 568, 569, 1156, 1954
PspXI VCTCGAGB 1 cut(s) 371
PstI CTGCAG 1 cut(s) 982
PstNI CAGNNNCTG 1 cut(s) 49
PsyI GACNNNGTC 1 cut(s) 1046
PvuII CAGCTG 2 cut(s) 1110, 1676
RsaI GTAC 2 cut(s) 113, 1582
RsaNI GTAC 2 cut(s) 112, 1581
SacI GAGCTC 1 cut(s) 392
SapI GCTCTTC 2 cut(s) 549, 756
SaqAI TTAA 7 cut(s) 860, 1065, 1212, 1500, 1644, 1689, 1767
Sau3AI GATC 2 cut(s) 508, 1570
Sau96I GGNCC 5 cut(s) 32, 568, 569, 1156, 1954
ScaI AGTACT 1 cut(s) 1582
SchI GAGTC 2 cut(s) 49, 1199
ScrFI CCNGG 6 cut(s) 322, 340, 812, 1046, 1943, 1958
SduI GDGCHC 3 cut(s) 392, 572, 1550
SexAI ACCWGGT 1 cut(s) 1044
SfaNI GCATC 5 cut(s) 448, 610, 673, 783, 1585
SfcI CTRYAG 2 cut(s) 978, 1949
Sfr274I CTCGAG 1 cut(s) 371
SfuI TTCGAA 1 cut(s) 487
SinI GGWCC 2 cut(s) 1156, 1954
SlaI CTCGAG 1 cut(s) 371
SmlI CTYRAG 3 cut(s) 371, 444, 1991
SmoI CTYRAG 3 cut(s) 371, 444, 1991
SnaBI TACGTA 1 cut(s) 941
SseBI AGGCCT 1 cut(s) 242
SsiI CCGC 8 cut(s) 30, 53, 95, 283, 318, 430, 1358, 1997
SspI AATATT 1 cut(s) 1855
SspMI CTAG 5 cut(s) 189, 395, 819, 1452, 1625
SstI GAGCTC 1 cut(s) 392
StuI AGGCCT 1 cut(s) 242
StyD4I CCNGG 6 cut(s) 320, 338, 810, 1044, 1941, 1956
StyI CCWWGG 2 cut(s) 35, 1394
TaaI ACNGT 6 cut(s) 549, 948, 1100, 1716, 1818, 1894
TaiI ACGT 2 cut(s) 943, 1511
TaqI TCGA 4 cut(s) 279, 372, 487, 513
TatI WGTACW 1 cut(s) 1580
TauI GCSGC 4 cut(s) 33, 55, 320, 1999
TfiI GAWTC 5 cut(s) 276, 361, 830, 878, 1519
Tru1I TTAA 7 cut(s) 860, 1065, 1212, 1500, 1644, 1689, 1767
Tru9I TTAA 7 cut(s) 860, 1065, 1212, 1500, 1644, 1689, 1767
TscAI CASTG 6 cut(s) 54, 615, 1063, 1547, 1815, 1899
TseFI GTSAC 3 cut(s) 1040, 1048, 1457
TseI GCWGC 7 cut(s) 265, 409, 836, 910, 1107, 1179, 1637
Tsp45I GTSAC 3 cut(s) 1040, 1048, 1457
TspRI CASTG 6 cut(s) 54, 615, 1063, 1547, 1815, 1899
Tth111I GACNNNGTC 1 cut(s) 1046
Van91I CCANNNNNTGG 2 cut(s) 1175, 1794
VpaK11BI GGWCC 2 cut(s) 1156, 1954
XapI RAATTY 4 cut(s) 716, 777, 1339, 2006
XceI RCATGY 3 cut(s) 112, 1056, 1865
XcmI CCANNNNNNNNNTGG 3 cut(s) 476, 1377, 1791
XhoI CTCGAG 1 cut(s) 371
XmiI GTMKAC 1 cut(s) 1902
XmnI GAANNNNTTC 1 cut(s) 496
XspI CTAG 5 cut(s) 189, 395, 819, 1452, 1625
ZrmI AGTACT 1 cut(s) 1582
Zsp2I ATGCAT 2 cut(s) 463, 798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.