pycom04g01020

No description available

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0000582
Physical Location & Seq
Reverse (-)
892455 .. 918811
26357 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g01020.4

Sequence Viewer

Length: 8907 bp
ATGTTCAGGCACCCTTCTATTTTCCGACCGCCCTCCGCCGGAGAACGGGATTGGCGACAACCGCCGCCGCCTCAGCAACCATACCCACAACCTCTAAACCCCAATTTCTCTCTCCAAAACCAAAACCCCGCCAATTCAGCCTATATTTATCCTCAAAACCCCGCCTTTGCCCCCTACCTTGCCCACAACCCCAATTTCCCTAGTTTTACTATCCAAAGCCTTAATTTCCCAATCCAAACCCCTAGCTTCCCGCTCCAAAACCCTATTTTTAATCCCCTACAGCTCCCAAATCCAACGTTTCCGCCCCAGACCTCATCCGAGAACCCGAAACCCAATGTTGATCCTCAACAGCTCCCAAATTCTGCGTTTCAGCCTCAGACTTCATGTGAGAACCTGAAAGAGATGCTGGAGAGCATCGATCAGGCAGTCGAAAAGGCTCGCGGTGATTTTGTGGCGGCAGGAAGGAGCGTCTCGGCGTGGAAGGTGTTACAGTCTGCGCTTGTGATGCTCAAGGTTGATGACCGGAGCTTTCTTATCGGGCTTCAAATGCATCAAGTCCCTTCTCTTCACCGCCTCATGCTCACCGAAGGCAGGATAAGTTCATTTATCCATTGCTTTGTTCTGGCTCGAAGAATTACATCTTTGTATGATTTGGAACTTGCAATCTGCAAGAATGAGGAGATTGAGGAGTTTGAAGTGCTGGGATTGGGCCCTTTGTTCCGTCACCCCCTTGTTTTGCATTATTTCCCAGTGAGTTCTGATACAACTGAAGTGTTTAAGATAACTAGCGAGGAGATACTATGTTTACTCACCTTGTATCAAGAACATAAACGTAAAGTCTCTGTTGAAGAATTTTTGGATTATATTGTTAAGAGGCGATCAGTTGCAAGCAAGGAAAATATCGGAATTCGAATTTGTAGCTTGGGGGTGCACGTTTCTTCTATTCGGAAAGGCAGGAAGTTAGAACGTGCCGCTCTAATTAAATCTCAAGAGCAAGTTAGAATGCGCCGCTATAAGAAGAAGGAACCAATTCTTACCTCATTGAATGAGCGGCTAGACAAGCATTTCTGTGACATTTCTCAGCATGCTGAAGTGTTTTCTGTTGTACAAAAGGAATTTTGTGACAAGAAAGATAGATTTGTTTCTTCAAGTTCAAAGGATGGAGGTGGTAAGGATTTTTTACATGAAGATGACAAAGATAAAGGTCATGCATGCACCGAGGTTAACTTTTCGTTACAATCTGCTAAAATTTCGGACCAAGTGAGTAACTCTACTTACATGTCTGCAATAGAGGAGAGGCCTTTGCTTGGATCAAACCACCCTTCTCCGGCTTGTGGAACCCAAAAGCATAATGAGGGTAATGGGTCCGTAAAAAAGAAAAGAAAATACGAAAATCTAAGCAGCCCCATCTCTGTCCCCCAAAAATTACGAAAGAGAGACAAGGTAGAACAAGATGTTCTTTTTACTAAGAATGACCATGAAACCGAGGAGGACATTAGTATGATTAAAACTGATCTTTCAGTTTCCAGTGATTTTTTGAGGAAGTTTATTACAACTTGGAAGGATGCATGTAAGGAGCAGACTGTGACTGAGGTACTTTGGAGCATGCTTCAGTGTTATGATAAGAGGATGAAAAAAATCAGCAGAATATTTGCTTCAGACCCATTGATTGGATTATTGAATGTTGCTGTCTCATCTATCAAATGTGGAATGTGGGATAGCATGTATGATACATCCCAATCCATTGGCCAACACGAATTAAGTAGAACTTCTACTGATAAATATTCTGAATATTTGAACACCGATGTTGAATCAAATATTAAGGATGCACCGCCAGTCATTACTGAACATGTTACCCAACATACTCAGACCTCACAGTGCCTAGAGCTGGATCATGGACGTCGTCAGAGAACTCATGGATGTTATCAGAGAGTGCTCACCATGGATTATGACAATGTTGTGGCAGCCTCACACTGCCTGGAGCAGGATCATCAACGTCGTCAGAGGATTCGTGGACGTCGTCAGAGAGTGCTCACCATGGATTACAACAATGTTGTGGCAGCCTCACGCTGCCCAGAGCAGGATCATCAACGTCGTCTGAGAATTCGTGGACGTCGTCAGAGAGTTCTTGGTAAGCCAGTCTGGTGTATGCAGAAGATAATCCAAAAGAGTGAGAAAAAGAACACGGGCAAAGGCTCATCCAGAGGATCTCCTCTTGAAAAAAAAGTCTGCTATCTGTGTGGTCAAGTTGGACACGTTCACAAGAACTGCTTCCAACAGACTGGATCATCTTTGGCTCCAGAGGATCCCTTGGAATTGGTTCAGCACCCAGCTCAGTCAAACAGATCTGTTGGGAAATTTCCAGTTCATCCCCAGCCACAACAGAGTACGAACAGAGCACCAATGCCACGGAACAGTGGATGCGAATTTGTAGCATGTGGACCTGCAGGTGGTCAAGTAGCTGTTGCTGGAGAAGCGATGGAAGAGAAAGTCAATGCTGTGGTAGATGGTGTGTCAGTTGAAGACATAATCAGGAAAGTTGCTACATATTTTGAATTTGATCATGGAATGTGCATCAGCGGTGAGCCACTTCAGGAGAAGATATTTATCTTCTTGAGAAAGCTTTGCAATTGTGAAATTTGGTTGGTTGAAGAATTTCGTGTCAAGGAATTTAGGTGCCTTGGTTTTGGGGAATTTCTAATGTTTTTAGAAAAATATGCCTGTCTACTTCCACATGAGCTGTGCAAGTTCTTGACTGGTGACGGAAGTGAGAAGTGTCCTTTGGAGGTTTGCATGCTCCAGCATTATTTTATTGTGTTAGTTTCTCAAGCTATAAATAGTTTATGGGAAGATGAAGAAATTTGCAAACTAAATATTCCATTACTGCTTAGGAAGCAGTTCCCATTGATTAGTTTCCAAACCATTGAAAATAGTTCTGTAGAAGATTTTCTGAGTATAGTGGAGAAGCATAAAAGCACTGCAATTTCCAAACGTATTCTATTTTCAATGACATTATATGGAACTAGTGACCCGACAGACTCATCAAAGCACTGTAAGAAAACAAAAACCCATGAATCTGTAACCTCCAAGGATGCAATTCAAGTCCTACTCAGAGCTCCAATGATGTTGGATTTAAACTTATGGTCACATTGGGACCTCTTGTTTGCTCCCTCTCTTGGTCCACTTGTACTATGGTTATTGAATGAAGTCAACACTGATGAACTGCTGTGTTTGGTGACGAAGGATGGAAAAGTGATTCGGTTAGACCATTCATCTACTGTAGGTTCATTCTTGGAAGCTGCTCTTCAAGGATCGTCTTTCCAAACAGCAGTGAAAATGTTATCTCTGTTCTCACTATCTGGGGGAGAAAAACATGTCCCAGTGTCCCTTTTGAAATTTCATCTGCAGCATGCATTTGAAGTCATTTTGAAGAATCATCTTCTGGAAGTAAATGGCAGTAAGAATTTTCTTAATCAAGAAAAAGATTTTTCTGGAAAGCAAATGGTTGGTGAAGGTTCGACAAGTAAATTATGTAATGAGTTACACAGGGACGTAACTCGGATGAATATCGGTGAATCAGTTTTATCAAGATTTGTCATTGATTGTCTTGGCTATCTACCTGCAGAGTTTCGTAGTTTTGCTGCCGATGTATTGCTTTCAGGGATGCAATCTGTTTTCAAACATGCTGCTTCAGCCATTTTGGGTGAGTGCAAGCAAACAGAGCAGCGGCTCATGCTTCATGAAGTTGGCTTATCACTTGGAATAATAGAATGGATTGATGATTACCATAAATTTTGTTCTTATGATGCTGCTGATTCATTCATTTCTGGGTCGTCATGCTTCACTGTTAGGCATAAAACGGGGTCAGACTCAAAGTATATTAAAGATGTGTCAGATAAGCTTGCCGCTTATGAAGGGACTATGAGTGCATCTGTTATGGAAGACAAGCAAAAAGATGAATGTACTGAAGCCTGTCTAAAGATTAGTTGTGCAGAAGCTTCCGAAGCTACAATTGTCAGTGGCTACCCAGAGCATTATACTGAACTTAATGAGCTGGAAGATCGAGTGCTGGTAATTGAGTCGATCAGGAGAGATGAATTTGGTCTAGATTCAAGCCTGTCAAATGTTGAAAGTATCATCCTAAAGAAGCAGCACGCTCGGTTAGGTCGAGCTCTGCATTGCCTTTCGCAGGAATTGTATTCTCAGGATTCCCATTTTCTTCTTGAGCTGGTTCAAAACGCTGATGATAATACCTACCCATCAAATGTAGAACCAACTCTAACATTCATTCTTCAAGATTCAGGTATTCTTGTTTTGAATAATGAACGGGGCTTTTCTGCCCAGAACATTAGGGCACTATGTGATGTTGGAAATTCAACCAAGAAAGGATCTAATGCTGGGTACATAGGGCAGAAGGGCATTGGTTTCAAATCAGTTTTTCGGGTTACAGATGCTCCAGAAATACATTCCAATGGTTTTCATATAAAGTTTGATATAAGTGAGGGTCAGATTGGTTTAATTTTGCCCACAGTTGTACCTCCTCGCAATATTGACTTGTTTAGCAGCCTGACATCTATTGACGATGATAAACGGGATTGTAACAGCTGGAACACTTGCATTGTTCTTCCTTTCAGATCAAAAGTATCAGATGGAACTGTCATGAAAAACATAATTAATATGTTTTCAGATCTTCATCCATCTCTACTGCTCTTTCTCCACCGCCTCCAGTGTATAAAGTTTAGAAACTTGCTCGATGATACCCTTACAGTCATGAGAAAATATATTGTGGGAGATGGTATCGTTAAGATTTCACATGGAAAAGAGAACATGACATGGTTTGTAGTATCTCAGAAATTGCAAGCAGATTTCATTCGTACTGATGTACAGACAACAGAAATCTCAATAGCATTTACTTTGAAGGAATCAGATAATGGTGATTACAGTTCCGATCTAATCCAACAGCCTGTTTTTTCATATCTCCCTCTCAGAACATATGGACTGAAATTTATTCTTCAGGGTGATTTTGTTCTTCCTTCATCTAGAGAGGAAGTAGATGGAGATAGTCCCTGGAACCAGTGGCTGTTGTCTGAATTTCCTGATTTGTTTGTCAATGCAGAGAAATCATTTTGTTCTCTTCCATGTTTTAAAGAGAATCCCGGGAGAGCTGTGACAGTCTATATGTCCTTTGTTCCGCTTGCGGGTGAAGTGCATGGTTTCTTTTCTCCTCTTCCGCGATTGATTACTGCAAAATTACGCGCATCGAATTGCTTATTCATGGAAGGGGGAAATAATGAATGGGTTCCTCCTTGCGGAGTCCTAAGAGGTTGGAATAAACAGGCTCGTTTGCTTCTCCCTGATGCCTTACTGCGTGAGCATCTTGGCCTTGGGTTCTTGGATAAAAATATACTTCTGCCGGATCCGCTCGCAAGAGCTCTAGGTATTAGTGAGTATGGACCCAAAGTTCTGCTTCAACTTATGGATTCTTTATGTCATACACAAAATGGCCTCAAATCAATGGGACTGAGTTGGCTGGCCACTTGGCTAAGTGCACTTTATGCAATGTCATTCAGTTCTTCTGTCAAAGCTTCATTTGAATCGGGAATGGAAATGGAATTCATACATACCCTTCGAAAAATTCCTTTCATCCCTCTTTCAGACGGTACATATGGTGCAGTGGATGAAGGCCCAATTTGGTTGCATTTTGATGCCTTAAAGACTGAGTTTGAGGGTCAGCATGGACTTGAGTCTTTTCCTGATTTGTATGCTAAACTTAGGATTGTAAATCCTGGCTTTCTCATTGCATCATGTGCTGATGTGCCATCCGTGGATGTGACGACATCTGACAAAGTTACAAGTATGCTTCGTAGGATCGGTGTCCAACAGTTATCCGCACATGAAATTATCAAGGAGCACATCTTGCCGGATATATCTGATGACAGGTTTACAGACAGTGATAAGAATTTGATGAATGATTATATTTGCTTTGTAATGGTTCACCTACAGTTGGACTGCTATGATTGTCGTTCTGAACGGGAATACATAATCTCAGAACTAGGAAACAAAGCATATATATTAACAAATGGCGGCTTTAAACGACCAGCTGAAGCATCAATTCATTTCAGTAAAGCATTTGGAAACCCATTTGACATAAATAAATTGATTGATGGGGTGGATCTGGTTTGGCATGAGATTGACATCTCCTATCTGAAGCATCCTGCCACCAGATCACTCCCAAGTGGACTGATGAAATGGAGGGAATTTTTCCAGAAAATTGGTGTTACAGATTTTGTGAAAGTAGTTCAAGTTGAGAAAGGAATCAGTAGTTTATCCGATGCTTTATTGAATGAGTTGATGTTCAATAAAGACATCATTTCCCATGGATTGAATGCCACTGATTGGGAGTCACCTGAATTAGTCCAGTTATTGACCCTATTATCCGGAGATGACGACAAAAAAGGTTGTGAGTATCTCTTAGAGGTTCTCGATACATTATGGGATGATTGCTACAGTGATAAAACAACAGGTTACTGCATTTCTAAATCGGTAGCTGATAGATGGCCTTTCAGATCTTCGTTTATAAGCAGTATCTGTGATGTGCAATGGGTAGTATCAACAATGGATGATGAACTTCACTATCCAAAAACTTTGTATCACAACTGTCATGCAGTGCGCTCGGTTCTGGGTGCATCTGCTCCATATTCTGTTCCAAAGGTGAGAAGTGGAAAGTTTGCAAGTGATATTGGGTTTAAGACAAGAATCTCTCTTGGCGATGTTCTTGAGATTTTGAAACTCTGGAGGTGTGAGAAACCATTCAGGGCCAGCCTAGCACAAATGTTCAAATTTTACTCATTAGTTTGGAATGAAATGGCTCCTTCAAAGCAGATAATTATGGACGAGTTCCATTCTGGACCTTCCATATTTGTTCCATATCAATCTGGCTTCAGTCACGAGGATGTGGTGTCTGGTGTATTTTTGTCCCCTGAAGAAGTATATTGGGATGATTCCTCTAACTTTATCAAGGCGGTCCATCCTGAGTGCAGCTCAACAGCTGTCCGTCCTGTGTGCAGCTCAACAGCTGTCAATCACATCCCCTTAAATAAGATGCTTCGTAATTTCTACCCAGGCCTTCATGACTTCTTTGTTGGTCACTTTGGAGTACATGAGACCCCACCTTTTCGGAGCTACCTTCAGATTTTGTTAGATTTATCAAATGTTGCTTTGCCTTCACAAGCAGCTATTGCTGTTTTTCGAGTTCTCCTCAAATGGACTGATGGGTTGAAGTCAGGATCAAGTGCTGAAGATATTCTTTATCTGAAAAGGTCTCTTACGAAGATTGAATGCACGGTGCTTCCTACTGTGCAAGATAAGTGGGTTTCTCTACATCCTTCCTTTGGATTTGTCTGCTGGTGTGATGATTTGATGTTAAGACAGCAGTTTACGCATTTGGATGGCGTTCATTTTTTATACTTCGGTGAACTAAGTCATGATGATGTAGAGATGCTATTTAAGAAAGTTTCCATTCTCTTGAAAGCTTTAGGGATTCCTGCACTTTCAGAGGCTGTAACTCGTCAGGCATTATTTTCCGGTCTGGGAGATTGTAGCTTTAAAGCTGCATTGCTGGATTGGGCTCTTCCATATGCACAACGCTACTTACAAAGTGTACACCCTGATAAATATACACAACTCAAGCACTTTGGATTTGATATAGTAAATCGTCTACAAGTAGTAGTTGTTGAAAAGCTGTTTTATCAGAACGTTATAAAGAGTTTCGGAATTAAATCCAAGAAGAGGCAACGATGTAGCTGTCTGCTGCAGGGTAGCACGTTGTATACGAACCAAGAGCCAGATTCACACGCATTATTTGTGGAGCTATCACGTTTGCTTTTTGACGGAATTCCAGAATTACACTTGGCAAATTTCCTTCATATGATCACAATCATGGCTGAATCAGGTTCAACTGAGGAGCAGACAGAGTTTTTTATCTTGAACAGCCAAAAGGTGCCAAAACTTTCTGGCGGAGAATCTGTTTGGTCCCTGCCATCAGTGCGTTCATTGACAGACAATTACAAGTCACTCCAAAGTAGTGTAACTTCGACAGAAATAAATGAGGAAAGCTGTTCAAAATCCAAAAGGAAAGCAATAAAGTGGCCACCTGTTGATTGGAAAACTGCACCGGTTGCACAGTTTAGCAGTGCCTTGGAAAAAGAAATGCATGATGATTCTGGTGGCATTATCGGACAGTTGGATAATTTGACTCCAGGTTCAGTTGACATTAATTGGACCATTGAAGATGATTCAGCAACGACATCTGCAGCTTTAGTCATGCCAGACTTCAATGATCTGCAAGAACATTGTGGTGCAGCTTGCAATGAGACTGACAATAGAATGCGTATTGAATTCGATCCTATTAACTTAGGTTTTGTTTCTGACCCTCCTGAGATGCGTTCGTCTAGTTTTATTAGCCAAAGAGACCAACCTAGACATGCTGGTACATCCAGTGGAAGAGATGGAAGAGATGCGATGCTGACCGGGAGACTAGGTGAGCTTGTTGCTTTTAAATACTTGATAGCAAAAGCTGGAAAGTCTGTTGTGAAGTGGGTCAATGAATGTAACGAAACCGGGCTTCCCTATGACATAGTTATAAGGGAGAAGGAAGATAGTACAGAGTTCATTGAAGTTAAAGCAACCCAGTTCCGGACAAAAGATTGGTTTCGCATATCAATGAGGGAGTGGCAATTCGCAGTTGAAAAAGGTGAAGCTTTCAGCATTTTGCATGTCATTTTGTTGGGTAATAATGCTGCAAGGGTCTCGGTATACAAGAACCCTGTGAAATTGTGTCAGTCGGGTAAGCTGCATTTGAATCTTTCGATGCCTAAGCATCACAAGGAATTATTCCTGCTGTCGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3883

Protein Analysis

2969

Amino Acids

334.85

Weight (kDa)

6.22

Isoelectric Point (pI)

47.71

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000582)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G08300 AT1G08300 AT1G08300 AT4G13750
fragaria_vesca FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_2g13620 FvH4_4g13620 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13640 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660 FvH4_4g13660
malus_domestica MD04G1012800.v1.1 MD04G1012900.v1.1 MD04G1013100.v1.1 MD04G1013300.v1.1
prunus_persica Prupe.1G159000_v2.0.a1 Prupe.1G159100_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G159200_v2.0.a1 Prupe.1G358100_v2.0.a1
pyrus_communis pycom04g01020 pycom04g01030
rosa_chinensis RchiOBHm_Chr4g0414341 RchiOBHm_Chr4g0414351 RchiOBHm_Chr6g0275261 RchiOBHm_Chr7g0213881 RchiOBHm_Chr7g0213891
rosa_laevigata RLG00000008153 RLG00000008155 RLG00000013477
rosa_multiflora Rmu_co8510163.1_g000001 Rmu_sc0004087.1_g000027 Rmu_sc0005196.1_g000014 Rmu_sc0005558.1_g000005 Rmu_sc0005558.1_g000006 Rmu_sc0008100.1_g000005 Rmu_sc0008560.1_g000005
rosa_roxburghii Rroxscaffold_5G00358210 Rroxscaffold_5G00358220 Rroxscaffold_7G00187920 Rroxscaffold_7G00187930 Rroxscaffold_7G00193450
rosa_rugosa Rorug04G0127100 Rorug04G0127200 Rorug04G0127300 Rorug04G0127400 Rorug06G0090600
rosa_samantha Rh4AG185200 Rh4AG185300 Rh4AG185500 Rh4BG184700 Rh4BG184800 Rh4CG198000 Rh4CG198100 Rh4DG182400 Rh4DG182600 Rh6AG204100 Rh6BG207000 Rh6CG209600 Rh6DG200000 Rh7AG277400 Rh7CG296400 Rh7CG296500
rosa_wichuraiana Rw4G015850 Rw4G015860 Rw6G017730

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 6578, 7760, 8642
AarI CACCTGC 1 cut(s) 2438
AatII GACGTC 3 cut(s) 1903, 2020, 2116
Acc36I ACCTGC 3 cut(s) 2438, 2452, 3628
AccB1I GGYRCC 3 cut(s) 9, 2676, 7999
AccB7I CCANNNNNTGG 2 cut(s) 1670, 6396
AccBSI CCGCTC 4 cut(s) 253, 974, 1051, 5422
AccI GTMKAC 4 cut(s) 2725, 7717, 7829, 8814
AccII CGCG 3 cut(s) 441, 5233, 5256
AccIII TCCGGA 2 cut(s) 6437, 8694
AclI AACGTT 2 cut(s) 296, 7755
AcoI YGGCCR 3 cut(s) 1747, 5532, 8147
AcyI GRCGYC 3 cut(s) 1900, 2017, 2113
AdeI CACNNNGTG 1 cut(s) 4361
AflIII ACRYGT 4 cut(s) 1278, 1849, 2254, 3373
AgeI ACCGGT 1 cut(s) 8173
AhlI ACTAGT 1 cut(s) 3023
AjnI CCWGG 5 cut(s) 1977, 5066, 5785, 7120, 8257
AjuI GAANNNNNNNTTGG 2 cut(s) 2765, 2797
AloI GAACNNNNNNTCC 2 cut(s) 5445, 5477
Alw21I GWGCWC 9 cut(s) 933, 1938, 2034, 2401, 3118, 4174, 5434, 5551, 5913
Alw44I GTGCAC 2 cut(s) 929, 5547
AlwNI CAGNNNCTG 3 cut(s) 5080, 6588, 7559
Ama87I CYCGRG 1 cut(s) 5156
Aor13HI TCCGGA 2 cut(s) 6437, 8694
ApaI GGGCCC 1 cut(s) 713
ApaLI GTGCAC 2 cut(s) 929, 5547
ArsI GACNNNNNNTTYG 2 cut(s) 3146, 3178
AseI ATTAAT 2 cut(s) 4674, 8274
AsiGI ACCGGT 1 cut(s) 8173
Asp700I GAANNNNTTC 9 cut(s) 1029, 2270, 2319, 2655, 2897, 2946, 5298, 6809, 7302
AspLEI GCGC 4 cut(s) 499, 1008, 5258, 6672
AsuC2I CCSGG 4 cut(s) 5157, 5158, 8530, 8620
AsuII TTCGAA 2 cut(s) 910, 5629
AvaI CYCGRG 1 cut(s) 5156
BaeGI GKGCMC 4 cut(s) 713, 933, 4357, 5551
BaeI ACNNNNGTAYC 2 cut(s) 4518, 4551
BalI TGGCCA 3 cut(s) 1749, 5534, 8149
BamHI GGATCC 2 cut(s) 2305, 5416
BanI GGYRCC 3 cut(s) 9, 2676, 7999
BanII GRGCYC 5 cut(s) 713, 3118, 4174, 5434, 7630
BarI GAAGNNNNNNTAC 2 cut(s) 8074, 8106
BauI CACGAG 1 cut(s) 6947
BbsI GAAGAC 2 cut(s) 2529, 3948
Bbv12I GWGCWC 9 cut(s) 933, 1938, 2034, 2401, 3118, 4174, 5434, 5551, 5913
BbvCI CCTCAGC 1 cut(s) 72
BcgI CGANNNNNNTGC 6 cut(s) 4139, 4173, 6654, 6688, 8790, 8824
BciT130I CCWGG 5 cut(s) 1979, 5068, 5787, 7122, 8259
BclI TGATCA 2 cut(s) 2560, 7929
BcnI CCSGG 4 cut(s) 5157, 5158, 8530, 8620
BcuI ACTAGT 1 cut(s) 3023
BfuAI ACCTGC 3 cut(s) 2438, 2452, 3628
BglII AGATCT 3 cut(s) 2345, 4687, 6566
Bme1390I CCNGG 9 cut(s) 1979, 5068, 5157, 5158, 5787, 7122, 8259, 8530, 8620
BmeT110I CYCGRG 1 cut(s) 5156
BmrFI CCNGG 9 cut(s) 1979, 5068, 5157, 5158, 5787, 7122, 8259, 8530, 8620
BmrI ACTGGG 3 cut(s) 743, 3374, 8683
BmuI ACTGGG 3 cut(s) 743, 3374, 8683
BoxI GACNNNNGTC 1 cut(s) 5743
BpiI GAAGAC 2 cut(s) 2529, 3948
BplI GAGNNNNNCTC 4 cut(s) 7025, 7057, 7242, 7274
BpmI CTGGAG 9 cut(s) 428, 2000, 2283, 2490, 2783, 4440, 4709, 6814, 8241
Bpu10I CCTNAGC 3 cut(s) 72, 2888, 8874
Bpu14I TTCGAA 2 cut(s) 910, 5629
BpuEI CTTGAG 8 cut(s) 494, 972, 2635, 2811, 4244, 5762, 6797, 7670
BpuMI CCSGG 4 cut(s) 5157, 5158, 8530, 8620
Bsa29I ATCGAT 1 cut(s) 417
BsaBI GATNNNNATC 5 cut(s) 2606, 3566, 4692, 6194, 7934
BsaHI GRCGYC 3 cut(s) 1900, 2017, 2113
BsaI GGTCTC 4 cut(s) 7157, 7326, 8463, 8812
BsaWI WCCGGW 5 cut(s) 522, 6437, 7583, 8173, 8694
BsaXI ACNNNNNCTCC 6 cut(s) 4438, 4468, 8010, 8040, 8524, 8554
Bse118I RCCGGY 1 cut(s) 8173
Bse3DI GCAATG 7 cut(s) 610, 4177, 5565, 5796, 6605, 7613, 8374
Bse8I GATNNNNATC 5 cut(s) 2606, 3566, 4692, 6194, 7934
BseAI TCCGGA 2 cut(s) 6437, 8694
BseBI CCWGG 5 cut(s) 1979, 5068, 5787, 7122, 8259
BseCI ATCGAT 1 cut(s) 417
BseJI GATNNNNATC 5 cut(s) 2606, 3566, 4692, 6194, 7934
BseMI GCAATG 7 cut(s) 610, 4177, 5565, 5796, 6605, 7613, 8374
BseSI GKGCMC 4 cut(s) 713, 933, 4357, 5551
BseYI CCCAGC 4 cut(s) 700, 2329, 2373, 4397
BsgI GTGCAG 7 cut(s) 4011, 5691, 7057, 7084, 7530, 8154, 8379
Bsh1236I CGCG 3 cut(s) 441, 5233, 5256
Bsh1285I CGRYCG 1 cut(s) 29
BshNI GGYRCC 3 cut(s) 9, 2676, 7999
BshTI ACCGGT 1 cut(s) 8173
BshVI ATCGAT 1 cut(s) 417
BsiEI CGRYCG 1 cut(s) 29
BsiHKAI GWGCWC 9 cut(s) 933, 1938, 2034, 2401, 3118, 4174, 5434, 5551, 5913
BsiHKCI CYCGRG 1 cut(s) 5156
BsmBI CGTCTC 1 cut(s) 475
BsmI GAATGC 4 cut(s) 1008, 6391, 7343, 8391
Bso31I GGTCTC 4 cut(s) 7157, 7326, 8463, 8812
BsoBI CYCGRG 1 cut(s) 5156
Bsp119I TTCGAA 2 cut(s) 910, 5629
Bsp120I GGGCCC 1 cut(s) 709
Bsp13I TCCGGA 2 cut(s) 6437, 8694
Bsp1407I TGTACA 3 cut(s) 1105, 4882, 7660
Bsp19I CCATGG 3 cut(s) 1941, 2037, 6376
BspDI ATCGAT 1 cut(s) 417
BspEI TCCGGA 2 cut(s) 6437, 8694
BspFNI CGCG 3 cut(s) 441, 5233, 5256
BspHI TCATGA 5 cut(s) 3739, 4659, 4770, 7129, 7483
BspMAI CTGCAG 5 cut(s) 2449, 3408, 3625, 7815, 8314
BspMI ACCTGC 3 cut(s) 2438, 2452, 3628
BspQI GCTCTTC 2 cut(s) 3309, 7635
BspT104I TTCGAA 2 cut(s) 910, 5629
BspT107I GGYRCC 3 cut(s) 9, 2676, 7999
BspTNI GGTCTC 4 cut(s) 7157, 7326, 8463, 8812
BsrBI CCGCTC 4 cut(s) 253, 974, 1051, 5422
BsrDI GCAATG 7 cut(s) 610, 4177, 5565, 5796, 6605, 7613, 8374
BsrFI RCCGGY 1 cut(s) 8173
BsrGI TGTACA 3 cut(s) 1105, 4882, 7660
BssAI RCCGGY 1 cut(s) 8173
BssNAI GTATAC 2 cut(s) 7830, 8815
BssNI GRCGYC 3 cut(s) 1900, 2017, 2113
BssSI CACGAG 1 cut(s) 6947
BssT1I CCWWGG 8 cut(s) 1941, 2037, 2310, 2680, 3087, 5383, 6376, 8196
Bst1107I GTATAC 2 cut(s) 7830, 8815
Bst2BI CACGAG 1 cut(s) 6947
Bst2UI CCWGG 5 cut(s) 1979, 5068, 5787, 7122, 8259
Bst6I CTCTTC 9 cut(s) 570, 2478, 3309, 5139, 5232, 7635, 7781, 8497, 8506
BstACI GRCGYC 3 cut(s) 1900, 2017, 2113
BstAPI GCANNNNNTGC 5 cut(s) 5555, 5807, 5917, 7238, 8177
BstAUI TGTACA 3 cut(s) 1105, 4882, 7660
BstBI TTCGAA 2 cut(s) 910, 5629
BstDSI CCRYGG 5 cut(s) 1941, 2037, 2408, 5823, 6376
BstENI CCTNNNNNAGG 2 cut(s) 1982, 4187
BstFNI CGCG 3 cut(s) 441, 5233, 5256
BstHHI GCGC 4 cut(s) 499, 1008, 5258, 6672
BstMCI CGRYCG 1 cut(s) 29
BstNI CCWGG 5 cut(s) 1979, 5068, 5787, 7122, 8259
BstPAI GACNNNNGTC 1 cut(s) 5743
BstSCI CCNGG 9 cut(s) 1977, 5066, 5155, 5156, 5785, 7120, 8257, 8528, 8618
BstSLI GKGCMC 4 cut(s) 713, 933, 4357, 5551
BstUI CGCG 3 cut(s) 441, 5233, 5256
BstV2I GAAGAC 2 cut(s) 2529, 3948
BstX2I RGATCY 8 cut(s) 2207, 2305, 2345, 4388, 4687, 5416, 6172, 6566
BstXI CCANNNNNNTGG 3 cut(s) 1745, 2282, 6272
BstYI RGATCY 8 cut(s) 2207, 2305, 2345, 4388, 4687, 5416, 6172, 6566
BstZ17I GTATAC 2 cut(s) 7830, 8815
Bsu15I ATCGAT 1 cut(s) 417
BsuTUI ATCGAT 1 cut(s) 417
BtgI CCRYGG 5 cut(s) 1941, 2037, 2408, 5823, 6376
BtgZI GCGATG 3 cut(s) 2492, 6783, 8534
BtsI GCAGTG 6 cut(s) 1972, 2976, 3336, 5679, 6672, 8197
BveI ACCTGC 3 cut(s) 2438, 2452, 3628
CaiI CAGNNNCTG 3 cut(s) 5080, 6588, 7559
CciI TCATGA 5 cut(s) 3739, 4659, 4770, 7129, 7483
CfoI GCGC 4 cut(s) 499, 1008, 5258, 6672
Cfr10I RCCGGY 1 cut(s) 8173
Cfr9I CCCGGG 1 cut(s) 5156
ClaI ATCGAT 1 cut(s) 417
CseI GACGC 1 cut(s) 457
CspAI ACCGGT 1 cut(s) 8173
CspCI CAANNNNNGTGG 2 cut(s) 7349, 7384
DraI TTTAAA 5 cut(s) 3135, 5146, 6091, 7606, 8557
DraIII CACNNNGTG 1 cut(s) 4361
EaeI YGGCCR 3 cut(s) 1747, 5532, 8147
Eam1104I CTCTTC 9 cut(s) 570, 2478, 3309, 5139, 5232, 7635, 7781, 8497, 8506
EarI CTCTTC 9 cut(s) 570, 2478, 3309, 5139, 5232, 7635, 7781, 8497, 8506
EciI GGCGGA 3 cut(s) 25, 291, 8031
Ecl136II GAGCTC 3 cut(s) 3116, 4172, 5432
Eco130I CCWWGG 8 cut(s) 1941, 2037, 2310, 2680, 3087, 5383, 6376, 8196
Eco147I AGGCCT 2 cut(s) 1300, 7125
Eco24I GRGCYC 5 cut(s) 713, 3118, 4174, 5434, 7630
Eco31I GGTCTC 4 cut(s) 7157, 7326, 8463, 8812
Eco53kI GAGCTC 3 cut(s) 3116, 4172, 5432
Eco88I CYCGRG 1 cut(s) 5156
EcoICRI GAGCTC 3 cut(s) 3116, 4172, 5432
EcoNI CCTNNNNNAGG 2 cut(s) 1982, 4187
EcoO109I RGGNCCY 2 cut(s) 710, 3154
EcoRI GAATTC 5 cut(s) 906, 2103, 5612, 7893, 8396
EcoRII CCWGG 5 cut(s) 1977, 5066, 5785, 7120, 8257
EcoT14I CCWWGG 8 cut(s) 1941, 2037, 2310, 2680, 3087, 5383, 6376, 8196
EcoT22I ATGCAT 5 cut(s) 552, 1213, 1570, 3415, 8214
EcoT38I GRGCYC 5 cut(s) 713, 3118, 4174, 5434, 7630
ErhI CCWWGG 8 cut(s) 1941, 2037, 2310, 2680, 3087, 5383, 6376, 8196
Esp3I CGTCTC 1 cut(s) 475
FauI CCCGC 4 cut(s) 136, 169, 258, 5191
FauNDI CATATG 4 cut(s) 4993, 5665, 7636, 7926
FbaI TGATCA 2 cut(s) 2560, 7929
FblI GTMKAC 4 cut(s) 2725, 7717, 7829, 8814
FriOI GRGCYC 5 cut(s) 713, 3118, 4174, 5434, 7630
GlaI GCGC 4 cut(s) 498, 1007, 5257, 6671
GsaI CCCAGC 4 cut(s) 704, 2333, 2377, 4401
GsuI CTGGAG 9 cut(s) 428, 2000, 2283, 2490, 2783, 4440, 4709, 6814, 8241
HgaI GACGC 1 cut(s) 457
HhaI GCGC 4 cut(s) 499, 1008, 5258, 6672
Hin1I GRCGYC 3 cut(s) 1900, 2017, 2113
Hin6I GCGC 4 cut(s) 497, 1006, 5256, 6670
HinP1I GCGC 4 cut(s) 497, 1006, 5256, 6670
HincII GTYRAC 3 cut(s) 1225, 3211, 8269
HindII GTYRAC 3 cut(s) 1225, 3211, 8269
HindIII AAGCTT 6 cut(s) 2621, 3899, 3996, 5583, 7530, 8757
HpaI GTTAAC 1 cut(s) 1225
Hpy99I CGWCG 5 cut(s) 1905, 2001, 2022, 2097, 2118
Hsp92I GRCGYC 3 cut(s) 1900, 2017, 2113
HspAI GCGC 4 cut(s) 497, 1006, 5256, 6670
Kpn2I TCCGGA 2 cut(s) 6437, 8694
Ksp22I TGATCA 2 cut(s) 2560, 7929
KspAI GTTAAC 1 cut(s) 1225
LguI GCTCTTC 2 cut(s) 3309, 7635
MbiI CCGCTC 4 cut(s) 253, 974, 1051, 5422
MfeI CAATTG 2 cut(s) 2629, 4011
MflI RGATCY 8 cut(s) 2207, 2305, 2345, 4388, 4687, 5416, 6172, 6566
MlsI TGGCCA 3 cut(s) 1749, 5534, 8149
MluNI TGGCCA 3 cut(s) 1749, 5534, 8149
MlyI GAGTC 7 cut(s) 3032, 3863, 4088, 5322, 5753, 6410, 8248
Mox20I TGGCCA 3 cut(s) 1749, 5534, 8149
Mph1103I ATGCAT 5 cut(s) 552, 1213, 1570, 3415, 8214
MroI TCCGGA 2 cut(s) 6437, 8694
MroXI GAANNNNTTC 9 cut(s) 1029, 2270, 2319, 2655, 2897, 2946, 5298, 6809, 7302
MscI TGGCCA 3 cut(s) 1749, 5534, 8149
Msp20I TGGCCA 3 cut(s) 1749, 5534, 8149
MspA1I CMGCKG 6 cut(s) 2580, 3727, 4605, 6101, 7049, 7076
MspR9I CCNGG 9 cut(s) 1979, 5068, 5157, 5158, 5787, 7122, 8259, 8530, 8620
MunI CAATTG 2 cut(s) 2629, 4011
Mva1269I GAATGC 4 cut(s) 1008, 6391, 7343, 8391
MvaI CCWGG 5 cut(s) 1979, 5068, 5787, 7122, 8259
MvnI CGCG 3 cut(s) 441, 5233, 5256
NciI CCSGG 4 cut(s) 5157, 5158, 8530, 8620
NcoI CCATGG 3 cut(s) 1941, 2037, 6376
NdeI CATATG 4 cut(s) 4993, 5665, 7636, 7926
NmeAIII GCCGAG 1 cut(s) 452
NsiI ATGCAT 5 cut(s) 552, 1213, 1570, 3415, 8214
NspV TTCGAA 2 cut(s) 910, 5629
PaeI GCATGC 5 cut(s) 1088, 1215, 1609, 2797, 3413
PagI TCATGA 5 cut(s) 3739, 4659, 4770, 7129, 7483
PaqCI CACCTGC 1 cut(s) 2438
PceI AGGCCT 2 cut(s) 1300, 7125
PciI ACATGT 3 cut(s) 1278, 1849, 3373
PciSI GCTCTTC 2 cut(s) 3309, 7635
PcsI WCGNNNNNNNCGW 5 cut(s) 52, 2017, 2113, 4165, 7829
PctI GAATGC 4 cut(s) 1008, 6391, 7343, 8391
PdmI GAANNNNTTC 9 cut(s) 1029, 2270, 2319, 2655, 2897, 2946, 5298, 6809, 7302
PflFI GACNNNGTC 3 cut(s) 1902, 2019, 2115
PflMI CCANNNNNTGG 2 cut(s) 1670, 6396
PinAI ACCGGT 1 cut(s) 8173
PleI GAGTC 7 cut(s) 3032, 3863, 4087, 5321, 5752, 6409, 8248
PpsI GAGTC 7 cut(s) 3032, 3863, 4087, 5321, 5752, 6409, 8248
PpuMI RGGWCCY 1 cut(s) 3154
PscI ACATGT 3 cut(s) 1278, 1849, 3373
PshAI GACNNNNGTC 1 cut(s) 5743
PshBI ATTAAT 2 cut(s) 4674, 8274
PsiI TTATAA 3 cut(s) 6578, 7760, 8642
Psp124BI GAGCTC 3 cut(s) 3118, 4174, 5434
Psp1406I AACGTT 2 cut(s) 296, 7755
Psp5II RGGWCCY 1 cut(s) 3154
Psp6I CCWGG 5 cut(s) 1977, 5066, 5785, 7120, 8257
PspFI CCCAGC 4 cut(s) 700, 2329, 2373, 4397
PspGI CCWGG 5 cut(s) 1977, 5066, 5785, 7120, 8257
PspOMI GGGCCC 1 cut(s) 709
PspPPI RGGWCCY 1 cut(s) 3154
PstI CTGCAG 5 cut(s) 2449, 3408, 3625, 7815, 8314
PstNI CAGNNNCTG 3 cut(s) 5080, 6588, 7559
PsuI RGATCY 8 cut(s) 2207, 2305, 2345, 4388, 4687, 5416, 6172, 6566
PsyI GACNNNGTC 3 cut(s) 1902, 2019, 2115
PvuII CAGCTG 4 cut(s) 4605, 6101, 7049, 7076
SacI GAGCTC 3 cut(s) 3118, 4174, 5434
SapI GCTCTTC 2 cut(s) 3309, 7635
SbfI CCTGCAGG 1 cut(s) 2449
SchI GAGTC 7 cut(s) 3032, 3863, 4088, 5322, 5753, 6410, 8248
ScrFI CCNGG 9 cut(s) 1979, 5068, 5157, 5158, 5787, 7122, 8259, 8530, 8620
SdaI CCTGCAGG 1 cut(s) 2449
SfuI TTCGAA 2 cut(s) 910, 5629
SmaI CCCGGG 1 cut(s) 5158
SmlI CTYRAG 8 cut(s) 509, 987, 2614, 2826, 4223, 5741, 6776, 7685
SmoI CTYRAG 8 cut(s) 509, 987, 2614, 2826, 4223, 5741, 6776, 7685
SpeI ACTAGT 1 cut(s) 3023
SphI GCATGC 5 cut(s) 1088, 1215, 1609, 2797, 3413
Sse8387I CCTGCAGG 1 cut(s) 2449
SseBI AGGCCT 2 cut(s) 1300, 7125
SspI AATATT 6 cut(s) 1650, 1784, 1793, 1819, 2875, 4549
SstI GAGCTC 3 cut(s) 3118, 4174, 5434
StuI AGGCCT 2 cut(s) 1300, 7125
StyD4I CCNGG 9 cut(s) 1977, 5066, 5155, 5156, 5785, 7120, 8257, 8528, 8618
StyI CCWWGG 8 cut(s) 1941, 2037, 2310, 2680, 3087, 5383, 6376, 8196
TatI WGTACW 7 cut(s) 1105, 3187, 3962, 4882, 7156, 7660, 8660
TauI GCSGC 9 cut(s) 67, 70, 458, 974, 1011, 1054, 3730, 3908, 6087
TspGWI ACGGA 7 cut(s) 710, 1357, 2425, 2778, 5812, 7043, 7905
TspMI CCCGGG 1 cut(s) 5156
Tth111I GACNNNGTC 3 cut(s) 1902, 2019, 2115
Van91I CCANNNNNTGG 2 cut(s) 1670, 6396
VneI GTGCAC 2 cut(s) 929, 5547
VspI ATTAAT 2 cut(s) 4674, 8274
XagI CCTNNNNNAGG 2 cut(s) 1982, 4187
XbaI TCTAGA 2 cut(s) 4105, 5039
XcmI CCANNNNNNNNNTGG 2 cut(s) 3189, 8157
XmaI CCCGGG 1 cut(s) 5156
XmiI GTMKAC 4 cut(s) 2725, 7717, 7829, 8814
XmnI GAANNNNTTC 9 cut(s) 1029, 2270, 2319, 2655, 2897, 2946, 5298, 6809, 7302
ZraI GACGTC 3 cut(s) 1901, 2018, 2114
Zsp2I ATGCAT 5 cut(s) 552, 1213, 1570, 3415, 8214
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.